AlfalfaGEDB | Msa1070690

M. sativa cultivar zhongmu-4 / Msa1070690

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1070690	KAG4921200.1	61.176	85	32	1	7	91	34	117	2.29e-27	108

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1070690	A0A445HP51	61.628	86	32	1	7	92	54	138	4.19e-26	110

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0027390	Msa1070690	0.834132	3.577040e-56	-8.615850e-47
Msa0029910	Msa1070690	0.802184	6.327926e-49	-8.615850e-47
Msa0626220	Msa1070690	0.839059	1.987303e-57	-8.615850e-47
Msa0663250	Msa1070690	0.815012	1.149471e-51	-8.615850e-47
Msa0677080	Msa1070690	0.814152	1.782263e-51	-8.615850e-47
Msa0682550	Msa1070690	0.818998	1.462879e-52	-8.615850e-47
Msa0691050	Msa1070690	0.817273	3.591727e-52	-8.615850e-47
Msa0693380	Msa1070690	0.826447	2.699628e-54	-8.615850e-47
Msa0702570	Msa1070690	0.805381	1.372185e-49	-8.615850e-47
Msa0735160	Msa1070690	0.808957	2.399453e-50	-8.615850e-47
Msa0738940	Msa1070690	0.815299	9.926864e-52	-8.615850e-47
Msa0757800	Msa1070690	0.809163	2.167016e-50	-8.615850e-47
Msa0832090	Msa1070690	0.803264	3.787759e-49	-8.615850e-47
Msa0143850	Msa1070690	0.801857	7.385915e-49	-8.615850e-47
Msa0144790	Msa1070690	0.813372	2.646240e-51	-8.615850e-47
Msa0152400	Msa1070690	0.801703	7.945830e-49	-8.615850e-47
Msa0159770	Msa1070690	0.803550	3.304153e-49	-8.615850e-47
Msa0165300	Msa1070690	0.825106	5.616490e-54	-8.615850e-47
Msa0169920	Msa1070690	0.805126	1.552013e-49	-8.615850e-47
Msa0170140	Msa1070690	0.801097	1.057219e-48	-8.615850e-47
Msa0213040	Msa1070690	0.806927	6.485837e-50	-8.615850e-47
Msa0388220	Msa1070690	0.805655	1.202062e-49	-8.615850e-47
Msa0398090	Msa1070690	0.834446	2.983891e-56	-8.615850e-47
Msa0398160	Msa1070690	0.819469	1.142940e-52	-8.615850e-47
Msa0410300	Msa1070690	0.803695	3.083959e-49	-8.615850e-47
Msa0436370	Msa1070690	0.802584	5.234477e-49	-8.615850e-47
Msa0445280	Msa1070690	0.808701	2.721543e-50	-8.615850e-47
Msa0458440	Msa1070690	0.802219	6.224419e-49	-8.615850e-47
Msa1010070	Msa1070690	0.806298	8.804092e-50	-8.615850e-47
Msa1021510	Msa1070690	0.801935	7.120760e-49	-8.615850e-47
Msa1032170	Msa1070690	0.836472	9.173591e-57	-8.615850e-47
Msa1033970	Msa1070690	0.827821	1.265759e-54	-8.615850e-47
Msa1040520	Msa1070690	0.816946	4.254688e-52	-8.615850e-47
Msa1070690	Msa1073830	0.802057	6.720039e-49	-8.615850e-47
Msa1070690	Msa1082500	0.815686	8.141077e-52	-8.615850e-47
Msa1070690	Msa1127770	0.817893	2.603530e-52	-8.615850e-47
Msa1070690	Msa1224830	0.805742	1.152743e-49	-8.615850e-47
Msa1070690	Msa1227330	0.804455	2.143011e-49	-8.615850e-47
Msa1070690	Msa1307550	0.809229	2.098160e-50	-8.615850e-47
Msa1070690	Msa1317580	0.805926	1.054436e-49	-8.615850e-47
Msa1070690	Msa1335710	0.801226	9.949754e-49	-8.615850e-47
Msa1070690	Msa1379850	0.804363	2.239170e-49	-8.615850e-47
Msa1070690	Msa1392700	0.804676	1.926950e-49	-8.615850e-47
Msa1070690	Msa1393410	0.800676	1.288851e-48	-8.615850e-47
Msa1070690	Msa1408620	-0.811943	5.435080e-51	-8.615850e-47
Msa1070690	Msa1422840	0.801331	9.467732e-49	-8.615850e-47
Msa1070690	Msa1435400	0.800107	1.683337e-48	-8.615850e-47
Msa1070690	Msa1457430	0.817459	3.262522e-52	-8.615850e-47
Msa0250670	Msa1070690	0.807200	5.677296e-50	-8.615850e-47
Msa0253340	Msa1070690	0.801590	8.382389e-49	-8.615850e-47
Msa0264780	Msa1070690	0.801932	7.129445e-49	-8.615850e-47
Msa0276920	Msa1070690	0.811866	5.650988e-51	-8.615850e-47
Msa0299730	Msa1070690	0.814242	1.702387e-51	-8.615850e-47
Msa0317740	Msa1070690	0.813224	2.852116e-51	-8.615850e-47
Msa0484780	Msa1070690	0.831472	1.637172e-55	-8.615850e-47
Msa0512870	Msa1070690	0.818946	1.502984e-52	-8.615850e-47
Msa0526940	Msa1070690	0.807207	5.658051e-50	-8.615850e-47
Msa0570640	Msa1070690	0.804635	1.964923e-49	-8.615850e-47
Msa0572480	Msa1070690	0.810350	1.204272e-50	-8.615850e-47
Msa0581050	Msa1070690	0.807230	5.595662e-50	-8.615850e-47
Msa0857640	Msa1070690	0.804289	2.319958e-49	-8.615850e-47
Msa0893810	Msa1070690	0.811507	6.763424e-51	-8.615850e-47
Msa0908170	Msa1070690	0.800981	1.116957e-48	-8.615850e-47
Msa0924310	Msa1070690	0.830925	2.231139e-55	-8.615850e-47
Msa0959010	Msa1070690	0.802231	6.188645e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 56 sgRNAs with CRISPR-Local

Find 233 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCGGATCAACATTAATATTT+AGG	0.140210	7_2:+67018158	None:intergenic
TGTTAATAAGATAAAGAAAA+TGG	0.214299	7_2:-67018431	Msa1070690:CDS
ATGATAATGCCAAACCTTTA+CGG	0.325335	7_2:-67018459	Msa1070690:CDS
GCACATCTATTGAAGATAAC+AGG	0.371342	7_2:-67018331	Msa1070690:CDS
TGATAATGCCAAACCTTTAC+GGG	0.390544	7_2:-67018458	Msa1070690:CDS
GTACAGTGAGCAGCGAAAAC+AGG	0.391377	7_2:+67019514	None:intergenic
AACATATGCCCGTAAAGGTT+TGG	0.392561	7_2:+67018450	None:intergenic
TATTTAGGATGGAAGAATCT+TGG	0.396361	7_2:+67018173	None:intergenic
AGATAACAGGAACAGGCGTT+AGG	0.414956	7_2:-67018318	Msa1070690:CDS
GGGTTAGAGATGTGTGAGTT+GGG	0.415605	7_2:+67019535	None:intergenic
AAGAAAATGGGTACCGGAGG+TGG	0.418788	7_2:-67018418	Msa1070690:CDS
AGGAAGAGAACTAGGTTTCA+AGG	0.436976	7_2:-67019586	Msa1070690:five_prime_UTR
CGGCTGAGATCCGCAGTGTC+CGG	0.439859	7_2:-67019731	Msa1070690:five_prime_UTR
GTTAATAAGATAAAGAAAAT+GGG	0.441948	7_2:-67018430	Msa1070690:CDS
TCTTGGTGTGCACTAGAAAT+CGG	0.457140	7_2:+67018190	None:intergenic
GAGAACTAGGTTTCAAGGCT+GGG	0.462573	7_2:-67019581	Msa1070690:five_prime_UTR
GCAGACGACGGCGCCGGAAA+AGG	0.464549	7_2:+67019481	None:intergenic
AAGGAAGCAGACGACGGCGC+CGG	0.467904	7_2:+67019475	None:intergenic
AGGGTTAGAGATGTGTGAGT+TGG	0.468133	7_2:+67019534	None:intergenic
AGAGAACTAGGTTTCAAGGC+TGG	0.484323	7_2:-67019582	Msa1070690:five_prime_UTR
ACAAGGGATGTTAGACTTGG+TGG	0.489358	7_2:+67019790	None:intergenic
TCCATGTCGTCGTCTACTCC+AGG	0.491725	7_2:-67019441	Msa1070690:intron
TTATTAACATATGCCCGTAA+AGG	0.496383	7_2:+67018445	None:intergenic
CTATTGAAGATAACAGGAAC+AGG	0.499479	7_2:-67018325	Msa1070690:CDS
ATCAACATTAATATTTAGGA+TGG	0.501295	7_2:+67018162	None:intergenic
TAGTTAGTATACATTGAAGA+TGG	0.508286	7_2:-67018245	Msa1070690:exon
GAAATCGGAGGCAAAGAGAC+TGG	0.518371	7_2:+67018205	None:intergenic
TTTATAGAGATAAGTGCTCC+TGG	0.520421	7_2:-67018505	Msa1070690:intron
GATAACAGGAACAGGCGTTA+GGG	0.525440	7_2:-67018317	Msa1070690:CDS
GACATGGAGAGACGACGAGA+AGG	0.546424	7_2:+67019456	None:intergenic
AAGATAAAGAAAATGGGTAC+CGG	0.557851	7_2:-67018424	Msa1070690:CDS
CATCCCTTGTCATGGAAGGT+TGG	0.562694	7_2:-67019777	Msa1070690:five_prime_UTR
GGCGCCGGAAAAGGTGCGGT+GGG	0.563955	7_2:+67019490	None:intergenic
ATGACAAGGGATGTTAGACT+TGG	0.571536	7_2:+67019787	None:intergenic
CGGCGCCGGAAAAGGTGCGG+TGG	0.573665	7_2:+67019489	None:intergenic
TACAGTGAGCAGCGAAAACA+GGG	0.578200	7_2:+67019515	None:intergenic
ACCTGGAGTAGACGACGACA+TGG	0.581344	7_2:+67019440	None:intergenic
AAGTCTAACATCCCTTGTCA+TGG	0.582599	7_2:-67019785	Msa1070690:five_prime_UTR
CTAACATCCCTTGTCATGGA+AGG	0.584018	7_2:-67019781	Msa1070690:five_prime_UTR
AGTATACATTGAAGATGGAG+AGG	0.588503	7_2:-67018240	Msa1070690:three_prime_UTR
GACGAGAAGGAAGCAGACGA+CGG	0.592344	7_2:+67019469	None:intergenic
CAGCCGCGTCTGTGCATCAG+AGG	0.596627	7_2:+67019748	None:intergenic
AGAACTAGGTTTCAAGGCTG+GGG	0.597769	7_2:-67019580	Msa1070690:five_prime_UTR
TCTTTGTCATGACTAGAACC+AGG	0.616572	7_2:+67018487	None:intergenic
CTGAGCAGCTTCAACGACTG+AGG	0.616825	7_2:-67018276	Msa1070690:CDS
CACTTGATGCTGAAATTGCT+AGG	0.617250	7_2:-67018081	Msa1070690:three_prime_UTR
CGACGGCGCCGGAAAAGGTG+CGG	0.627644	7_2:+67019486	None:intergenic
TGTACCAACCTTCCATGACA+AGG	0.640267	7_2:+67019773	None:intergenic
ATAAAGAAAATGGGTACCGG+AGG	0.656877	7_2:-67018421	Msa1070690:CDS
ATACCTCTGATGCACAGACG+CGG	0.680694	7_2:-67019751	Msa1070690:five_prime_UTR
CCGCTCAGTTGTGTACGACA+CGG	0.686990	7_2:-67019649	Msa1070690:five_prime_UTR
GTACCAACCTTCCATGACAA+GGG	0.692437	7_2:+67019774	None:intergenic
TAGAACCGCGCCGGACACTG+CGG	0.693195	7_2:+67019721	None:intergenic
TGGTGTGCACTAGAAATCGG+AGG	0.702645	7_2:+67018193	None:intergenic
GAGATCCGCAGTGTCCGGCG+CGG	0.729060	7_2:-67019726	Msa1070690:five_prime_UTR
CCGTGTCGTACACAACTGAG+CGG	0.753698	7_2:+67019649	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATATATATATATATATATAT+GGG	+	chr7_2:67019187-67019206	None:intergenic	0.0%
!!	TATATATATATATATATATA+TGG	+	chr7_2:67019188-67019207	None:intergenic	0.0%
!!	ATATATATATATATATATAT+GGG	+	chr7_2:67019187-67019206	None:intergenic	0.0%
!!	TATATATATATATATATATA+TGG	+	chr7_2:67019188-67019207	None:intergenic	0.0%
!!!	TTTTTTTAAATTTCTTTCAT+GGG	+	chr7_2:67018268-67018287	None:intergenic	10.0%
!!!	TTTTTTTTAAATTTCTTTCA+TGG	+	chr7_2:67018269-67018288	None:intergenic	10.0%
!!	AAAAAAAAAACGAAAAAAAA+AGG	-	chr7_2:67018285-67018304	Msa1070690:CDS	10.0%
!!	TATGTATATATAAATCATAT+AGG	+	chr7_2:67018756-67018775	None:intergenic	10.0%
!!!	TTTTTTTAAATTTCTTTCAT+GGG	+	chr7_2:67018268-67018287	None:intergenic	10.0%
!!!	TTTTTTTTAAATTTCTTTCA+TGG	+	chr7_2:67018269-67018288	None:intergenic	10.0%
!!	AAAAAAAAAACGAAAAAAAA+AGG	-	chr7_2:67018285-67018304	Msa1070690:CDS	10.0%
!!	TATGTATATATAAATCATAT+AGG	+	chr7_2:67018756-67018775	None:intergenic	10.0%
!!	TGTTAATAAGATAAAGAAAA+TGG	-	chr7_2:67019460-67019479	Msa1070690:exon	15.0%
!!	GTTAATAAGATAAAGAAAAT+GGG	-	chr7_2:67019461-67019480	Msa1070690:five_prime_UTR	15.0%
!!	TGTTAATAAGATAAAGAAAA+TGG	-	chr7_2:67019460-67019479	Msa1070690:exon	15.0%
!!	GTTAATAAGATAAAGAAAAT+GGG	-	chr7_2:67019461-67019480	Msa1070690:five_prime_UTR	15.0%
!!!	TTTTTTTTTGTTGTTGGATA+CGG	+	chr7_2:67018197-67018216	None:intergenic	20.0%
!!!	GTAAGTTTTTTTTTTGTTGT+TGG	+	chr7_2:67018203-67018222	None:intergenic	20.0%
!!	AACAAAAAAAAAACTTACAG+CGG	-	chr7_2:67018205-67018224	Msa1070690:three_prime_UTR	20.0%
!!	TATATATATAAAACGTGTTG+TGG	+	chr7_2:67018873-67018892	None:intergenic	20.0%
!!!	ACAACACGTTTTATATATAT+AGG	-	chr7_2:67018872-67018891	Msa1070690:intron	20.0%
!!!	CAACACGTTTTATATATATA+GGG	-	chr7_2:67018873-67018892	Msa1070690:intron	20.0%
!!!	AACACGTTTTATATATATAG+GGG	-	chr7_2:67018874-67018893	Msa1070690:intron	20.0%
!!	ATCAACATTAATATTTAGGA+TGG	+	chr7_2:67019732-67019751	None:intergenic	20.0%
!!!	TTTTTTTTTGTTGTTGGATA+CGG	+	chr7_2:67018197-67018216	None:intergenic	20.0%
!!!	GTAAGTTTTTTTTTTGTTGT+TGG	+	chr7_2:67018203-67018222	None:intergenic	20.0%
!!	AACAAAAAAAAAACTTACAG+CGG	-	chr7_2:67018205-67018224	Msa1070690:three_prime_UTR	20.0%
!!	TATATATATAAAACGTGTTG+TGG	+	chr7_2:67018873-67018892	None:intergenic	20.0%
!!!	ACAACACGTTTTATATATAT+AGG	-	chr7_2:67018872-67018891	Msa1070690:intron	20.0%
!!!	CAACACGTTTTATATATATA+GGG	-	chr7_2:67018873-67018892	Msa1070690:intron	20.0%
!!!	AACACGTTTTATATATATAG+GGG	-	chr7_2:67018874-67018893	Msa1070690:intron	20.0%
!!	ATCAACATTAATATTTAGGA+TGG	+	chr7_2:67019732-67019751	None:intergenic	20.0%
!	AAAAAAAAAGGAAGAGAACT+AGG	-	chr7_2:67018297-67018316	Msa1070690:CDS	25.0%
!	ACATCATAAAGAAAAACTTG+TGG	+	chr7_2:67018613-67018632	None:intergenic	25.0%
!	GCAAGTAAATAACTAAAAAG+TGG	-	chr7_2:67018940-67018959	Msa1070690:intron	25.0%
!	GCAAGTAAATAACTAAAAAG+TGG	-	chr7_2:67018940-67018959	Msa1070690:intron	25.0%
!!	TTTTGTGAGTCAACTTTTAA+TGG	-	chr7_2:67019518-67019537	Msa1070690:five_prime_UTR	25.0%
!!	TTTGTGAGTCAACTTTTAAT+GGG	-	chr7_2:67019519-67019538	Msa1070690:five_prime_UTR	25.0%
!	TAGTTAGTATACATTGAAGA+TGG	-	chr7_2:67019646-67019665	Msa1070690:five_prime_UTR	25.0%
!	TCGGATCAACATTAATATTT+AGG	+	chr7_2:67019736-67019755	None:intergenic	25.0%
!	AAAAAAAAAGGAAGAGAACT+AGG	-	chr7_2:67018297-67018316	Msa1070690:CDS	25.0%
!	ACATCATAAAGAAAAACTTG+TGG	+	chr7_2:67018613-67018632	None:intergenic	25.0%
!	GCAAGTAAATAACTAAAAAG+TGG	-	chr7_2:67018940-67018959	Msa1070690:intron	25.0%
!	GCAAGTAAATAACTAAAAAG+TGG	-	chr7_2:67018940-67018959	Msa1070690:intron	25.0%
!!	TTTTGTGAGTCAACTTTTAA+TGG	-	chr7_2:67019518-67019537	Msa1070690:five_prime_UTR	25.0%
!!	TTTGTGAGTCAACTTTTAAT+GGG	-	chr7_2:67019519-67019538	Msa1070690:five_prime_UTR	25.0%
!	TAGTTAGTATACATTGAAGA+TGG	-	chr7_2:67019646-67019665	Msa1070690:five_prime_UTR	25.0%
!	TCGGATCAACATTAATATTT+AGG	+	chr7_2:67019736-67019755	None:intergenic	25.0%
	AAAGCAAATTGATAGAAACC+TGG	+	chr7_2:67018471-67018490	None:intergenic	30.0%
	AAGTATGAACTCTTATCACA+TGG	-	chr7_2:67018659-67018678	Msa1070690:intron	30.0%
	ACTTTATGTCCTATATGAGT+TGG	-	chr7_2:67018780-67018799	Msa1070690:intron	30.0%
	CACACTAATAATGTATGTGT+TGG	-	chr7_2:67018823-67018842	Msa1070690:intron	30.0%
!	ACACCCACTAATTTTTATGT+GGG	-	chr7_2:67018908-67018927	Msa1070690:intron	30.0%
	ACTCCCACATAAAAATTAGT+GGG	+	chr7_2:67019146-67019165	None:intergenic	30.0%
	TTATAGCAACATACACCTTA+GGG	+	chr7_2:67018975-67018994	None:intergenic	30.0%
!!	ACTCACTTGTTATTGTTAGA+AGG	+	chr7_2:67019002-67019021	None:intergenic	30.0%
	ACTCCCACATAAAAATTAGT+GGG	-	chr7_2:67019146-67019165	Msa1070690:intron	30.0%
!	ACACCCACTAATTTTTATGT+GGG	+	chr7_2:67018908-67018927	None:intergenic	30.0%
!	ATGATAATGCCAAACCTTTA+CGG	-	chr7_2:67019432-67019451	Msa1070690:intron	30.0%
	TTATTAACATATGCCCGTAA+AGG	+	chr7_2:67019449-67019468	None:intergenic	30.0%
	AAGATAAAGAAAATGGGTAC+CGG	-	chr7_2:67019467-67019486	Msa1070690:five_prime_UTR	30.0%
!	TATTTAGGATGGAAGAATCT+TGG	+	chr7_2:67019721-67019740	None:intergenic	30.0%
!!	GAATCTGCTTTTAATGTTCA+AGG	-	chr7_2:67019779-67019798	Msa1070690:five_prime_UTR	30.0%
	AAATTGCTAGGATGTTCTAT+TGG	-	chr7_2:67019822-67019841	Msa1070690:five_prime_UTR	30.0%
	AAAGCAAATTGATAGAAACC+TGG	+	chr7_2:67018471-67018490	None:intergenic	30.0%
	AAGTATGAACTCTTATCACA+TGG	-	chr7_2:67018659-67018678	Msa1070690:intron	30.0%
	ACTTTATGTCCTATATGAGT+TGG	-	chr7_2:67018780-67018799	Msa1070690:intron	30.0%
	CACACTAATAATGTATGTGT+TGG	-	chr7_2:67018823-67018842	Msa1070690:intron	30.0%
!	ACACCCACTAATTTTTATGT+GGG	-	chr7_2:67018908-67018927	Msa1070690:intron	30.0%
	ACTCCCACATAAAAATTAGT+GGG	+	chr7_2:67019146-67019165	None:intergenic	30.0%
	TTATAGCAACATACACCTTA+GGG	+	chr7_2:67018975-67018994	None:intergenic	30.0%
!!	ACTCACTTGTTATTGTTAGA+AGG	+	chr7_2:67019002-67019021	None:intergenic	30.0%
	ACTCCCACATAAAAATTAGT+GGG	-	chr7_2:67019146-67019165	Msa1070690:intron	30.0%
!	ACACCCACTAATTTTTATGT+GGG	+	chr7_2:67018908-67018927	None:intergenic	30.0%
!	ATGATAATGCCAAACCTTTA+CGG	-	chr7_2:67019432-67019451	Msa1070690:intron	30.0%
	TTATTAACATATGCCCGTAA+AGG	+	chr7_2:67019449-67019468	None:intergenic	30.0%
	AAGATAAAGAAAATGGGTAC+CGG	-	chr7_2:67019467-67019486	Msa1070690:five_prime_UTR	30.0%
!	TATTTAGGATGGAAGAATCT+TGG	+	chr7_2:67019721-67019740	None:intergenic	30.0%
!!	GAATCTGCTTTTAATGTTCA+AGG	-	chr7_2:67019779-67019798	Msa1070690:five_prime_UTR	30.0%
	CTTTCATGACCAACTCATAT+AGG	+	chr7_2:67018792-67018811	None:intergenic	35.0%
	TTGGTCATGAAAGACTATTG+TGG	-	chr7_2:67018799-67018818	Msa1070690:intron	35.0%
	TGGTCATGAAAGACTATTGT+GGG	-	chr7_2:67018800-67018819	Msa1070690:intron	35.0%
!	CACACCCACTAATTTTTATG+TGG	-	chr7_2:67018907-67018926	Msa1070690:intron	35.0%
	CACTCCCACATAAAAATTAG+TGG	+	chr7_2:67019145-67019164	None:intergenic	35.0%
	AAGTGGTTAAATACACCCTA+AGG	-	chr7_2:67018957-67018976	Msa1070690:intron	35.0%
	GTTATAGCAACATACACCTT+AGG	+	chr7_2:67018976-67018995	None:intergenic	35.0%
	AAGTGGTTAATTACACCCTA+AGG	-	chr7_2:67019106-67019125	Msa1070690:intron	35.0%
	TTTAGCAAAGCTACACCTTA+GGG	+	chr7_2:67019124-67019143	None:intergenic	35.0%
!	TTTTAGCAAAGCTACACCTT+AGG	+	chr7_2:67019125-67019144	None:intergenic	35.0%
	CACTCCCACATAAAAATTAG+TGG	-	chr7_2:67019145-67019164	Msa1070690:intron	35.0%
!	CACACCCACTAATTTTTATG+TGG	+	chr7_2:67018907-67018926	None:intergenic	35.0%
	TTTATAGAGATAAGTGCTCC+TGG	-	chr7_2:67019386-67019405	Msa1070690:intron	35.0%
!	TGATAATGCCAAACCTTTAC+GGG	-	chr7_2:67019433-67019452	Msa1070690:intron	35.0%
!	ATTTTCATAGTTTCCACCTC+CGG	+	chr7_2:67019489-67019508	None:intergenic	35.0%
	GCACATCTATTGAAGATAAC+AGG	-	chr7_2:67019560-67019579	Msa1070690:five_prime_UTR	35.0%
	CTATTGAAGATAACAGGAAC+AGG	-	chr7_2:67019566-67019585	Msa1070690:five_prime_UTR	35.0%
	AGTATACATTGAAGATGGAG+AGG	-	chr7_2:67019651-67019670	Msa1070690:five_prime_UTR	35.0%
!	GCTGATGTCTTTCTCTTTTT+CGG	+	chr7_2:67019755-67019774	None:intergenic	35.0%
	CTTTCATGACCAACTCATAT+AGG	+	chr7_2:67018792-67018811	None:intergenic	35.0%
	TTGGTCATGAAAGACTATTG+TGG	-	chr7_2:67018799-67018818	Msa1070690:intron	35.0%
	TGGTCATGAAAGACTATTGT+GGG	-	chr7_2:67018800-67018819	Msa1070690:intron	35.0%
!	CACACCCACTAATTTTTATG+TGG	-	chr7_2:67018907-67018926	Msa1070690:intron	35.0%
	CACTCCCACATAAAAATTAG+TGG	+	chr7_2:67019145-67019164	None:intergenic	35.0%
	AAGTGGTTAAATACACCCTA+AGG	-	chr7_2:67018957-67018976	Msa1070690:intron	35.0%
	GTTATAGCAACATACACCTT+AGG	+	chr7_2:67018976-67018995	None:intergenic	35.0%
	AAGTGGTTAATTACACCCTA+AGG	-	chr7_2:67019106-67019125	Msa1070690:intron	35.0%
	TTTAGCAAAGCTACACCTTA+GGG	+	chr7_2:67019124-67019143	None:intergenic	35.0%
!	TTTTAGCAAAGCTACACCTT+AGG	+	chr7_2:67019125-67019144	None:intergenic	35.0%
	CACTCCCACATAAAAATTAG+TGG	-	chr7_2:67019145-67019164	Msa1070690:intron	35.0%
!	CACACCCACTAATTTTTATG+TGG	+	chr7_2:67018907-67018926	None:intergenic	35.0%
	TTTATAGAGATAAGTGCTCC+TGG	-	chr7_2:67019386-67019405	Msa1070690:intron	35.0%
!	TGATAATGCCAAACCTTTAC+GGG	-	chr7_2:67019433-67019452	Msa1070690:intron	35.0%
!	ATTTTCATAGTTTCCACCTC+CGG	+	chr7_2:67019489-67019508	None:intergenic	35.0%
	GCACATCTATTGAAGATAAC+AGG	-	chr7_2:67019560-67019579	Msa1070690:five_prime_UTR	35.0%
	CTATTGAAGATAACAGGAAC+AGG	-	chr7_2:67019566-67019585	Msa1070690:five_prime_UTR	35.0%
	AGTATACATTGAAGATGGAG+AGG	-	chr7_2:67019651-67019670	Msa1070690:five_prime_UTR	35.0%
!	GCTGATGTCTTTCTCTTTTT+CGG	+	chr7_2:67019755-67019774	None:intergenic	35.0%
	ATGACAAGGGATGTTAGACT+TGG	+	chr7_2:67018107-67018126	None:intergenic	40.0%
	AAGTCTAACATCCCTTGTCA+TGG	-	chr7_2:67018106-67018125	Msa1070690:three_prime_UTR	40.0%
	AGGAAGAGAACTAGGTTTCA+AGG	-	chr7_2:67018305-67018324	Msa1070690:CDS	40.0%
!	CAGTTTTCTCTCAAAACGAG+TGG	+	chr7_2:67018574-67018593	None:intergenic	40.0%
	GAACTCTTATCACATGGTGA+TGG	-	chr7_2:67018665-67018684	Msa1070690:intron	40.0%
!	GGTCTTGTGACTTGTGTAAA+GGG	+	chr7_2:67018716-67018735	None:intergenic	40.0%
!	AGGTCTTGTGACTTGTGTAA+AGG	+	chr7_2:67018717-67018736	None:intergenic	40.0%
	TTTACACAAGTCACAAGACC+TGG	-	chr7_2:67018716-67018735	Msa1070690:intron	40.0%
	TGTGTTCTAGCAAATCCTAC+AGG	-	chr7_2:67019021-67019040	Msa1070690:intron	40.0%
!!!	ACACCCACTGGTTTTTATGT+GGG	-	chr7_2:67019057-67019076	Msa1070690:intron	40.0%
	ACTCCCACATAAAAACCAGT+GGG	+	chr7_2:67019063-67019082	None:intergenic	40.0%
	TCTTTGTCATGACTAGAACC+AGG	+	chr7_2:67019407-67019426	None:intergenic	40.0%
	AACATATGCCCGTAAAGGTT+TGG	+	chr7_2:67019444-67019463	None:intergenic	40.0%
!!	ATAAAGAAAATGGGTACCGG+AGG	-	chr7_2:67019470-67019489	Msa1070690:five_prime_UTR	40.0%
!	TCTTGGTGTGCACTAGAAAT+CGG	+	chr7_2:67019704-67019723	None:intergenic	40.0%
	CACTTGATGCTGAAATTGCT+AGG	-	chr7_2:67019810-67019829	Msa1070690:five_prime_UTR	40.0%
	ATGACAAGGGATGTTAGACT+TGG	+	chr7_2:67018107-67018126	None:intergenic	40.0%
	AAGTCTAACATCCCTTGTCA+TGG	-	chr7_2:67018106-67018125	Msa1070690:three_prime_UTR	40.0%
	AGGAAGAGAACTAGGTTTCA+AGG	-	chr7_2:67018305-67018324	Msa1070690:CDS	40.0%
!	CAGTTTTCTCTCAAAACGAG+TGG	+	chr7_2:67018574-67018593	None:intergenic	40.0%
	GAACTCTTATCACATGGTGA+TGG	-	chr7_2:67018665-67018684	Msa1070690:intron	40.0%
!	GGTCTTGTGACTTGTGTAAA+GGG	+	chr7_2:67018716-67018735	None:intergenic	40.0%
!	AGGTCTTGTGACTTGTGTAA+AGG	+	chr7_2:67018717-67018736	None:intergenic	40.0%
	TTTACACAAGTCACAAGACC+TGG	-	chr7_2:67018716-67018735	Msa1070690:intron	40.0%
	TGTGTTCTAGCAAATCCTAC+AGG	-	chr7_2:67019021-67019040	Msa1070690:intron	40.0%
!!!	ACACCCACTGGTTTTTATGT+GGG	-	chr7_2:67019057-67019076	Msa1070690:intron	40.0%
	ACTCCCACATAAAAACCAGT+GGG	+	chr7_2:67019063-67019082	None:intergenic	40.0%
	TCTTTGTCATGACTAGAACC+AGG	+	chr7_2:67019407-67019426	None:intergenic	40.0%
	AACATATGCCCGTAAAGGTT+TGG	+	chr7_2:67019444-67019463	None:intergenic	40.0%
!!	ATAAAGAAAATGGGTACCGG+AGG	-	chr7_2:67019470-67019489	Msa1070690:five_prime_UTR	40.0%
!	TCTTGGTGTGCACTAGAAAT+CGG	+	chr7_2:67019704-67019723	None:intergenic	40.0%
	CACTTGATGCTGAAATTGCT+AGG	-	chr7_2:67019810-67019829	Msa1070690:five_prime_UTR	40.0%
	ACAAGGGATGTTAGACTTGG+TGG	+	chr7_2:67018104-67018123	None:intergenic	45.0%
	CTAACATCCCTTGTCATGGA+AGG	-	chr7_2:67018110-67018129	Msa1070690:three_prime_UTR	45.0%
	GTACCAACCTTCCATGACAA+GGG	+	chr7_2:67018120-67018139	None:intergenic	45.0%
	TGTACCAACCTTCCATGACA+AGG	+	chr7_2:67018121-67018140	None:intergenic	45.0%
	AGAGAACTAGGTTTCAAGGC+TGG	-	chr7_2:67018309-67018328	Msa1070690:CDS	45.0%
	GAGAACTAGGTTTCAAGGCT+GGG	-	chr7_2:67018310-67018329	Msa1070690:CDS	45.0%
	AGAACTAGGTTTCAAGGCTG+GGG	-	chr7_2:67018311-67018330	Msa1070690:CDS	45.0%
	GGGTTAGAGATGTGTGAGTT+GGG	+	chr7_2:67018359-67018378	None:intergenic	45.0%
	AGGGTTAGAGATGTGTGAGT+TGG	+	chr7_2:67018360-67018379	None:intergenic	45.0%
	TACAGTGAGCAGCGAAAACA+GGG	+	chr7_2:67018379-67018398	None:intergenic	45.0%
!	TAGGACAAAACGTGTTGACC+AGG	+	chr7_2:67018737-67018756	None:intergenic	45.0%
	GTGTTCTAGCAAATGCCTGT+AGG	+	chr7_2:67019039-67019058	None:intergenic	45.0%
!	ATTTGCTAGAACACACCCAC+TGG	-	chr7_2:67019045-67019064	Msa1070690:intron	45.0%
!!!	CACACCCACTGGTTTTTATG+TGG	-	chr7_2:67019056-67019075	Msa1070690:intron	45.0%
	CACTCCCACATAAAAACCAG+TGG	+	chr7_2:67019064-67019083	None:intergenic	45.0%
	AGATAACAGGAACAGGCGTT+AGG	-	chr7_2:67019573-67019592	Msa1070690:five_prime_UTR	45.0%
	GATAACAGGAACAGGCGTTA+GGG	-	chr7_2:67019574-67019593	Msa1070690:five_prime_UTR	45.0%
	ACAAGGGATGTTAGACTTGG+TGG	+	chr7_2:67018104-67018123	None:intergenic	45.0%
	CTAACATCCCTTGTCATGGA+AGG	-	chr7_2:67018110-67018129	Msa1070690:three_prime_UTR	45.0%
	GTACCAACCTTCCATGACAA+GGG	+	chr7_2:67018120-67018139	None:intergenic	45.0%
	TGTACCAACCTTCCATGACA+AGG	+	chr7_2:67018121-67018140	None:intergenic	45.0%
	AGAGAACTAGGTTTCAAGGC+TGG	-	chr7_2:67018309-67018328	Msa1070690:CDS	45.0%
	GAGAACTAGGTTTCAAGGCT+GGG	-	chr7_2:67018310-67018329	Msa1070690:CDS	45.0%
	AGAACTAGGTTTCAAGGCTG+GGG	-	chr7_2:67018311-67018330	Msa1070690:CDS	45.0%
	GGGTTAGAGATGTGTGAGTT+GGG	+	chr7_2:67018359-67018378	None:intergenic	45.0%
	AGGGTTAGAGATGTGTGAGT+TGG	+	chr7_2:67018360-67018379	None:intergenic	45.0%
	TACAGTGAGCAGCGAAAACA+GGG	+	chr7_2:67018379-67018398	None:intergenic	45.0%
!	TAGGACAAAACGTGTTGACC+AGG	+	chr7_2:67018737-67018756	None:intergenic	45.0%
	GTGTTCTAGCAAATGCCTGT+AGG	+	chr7_2:67019039-67019058	None:intergenic	45.0%
!	ATTTGCTAGAACACACCCAC+TGG	-	chr7_2:67019045-67019064	Msa1070690:intron	45.0%
!!!	CACACCCACTGGTTTTTATG+TGG	-	chr7_2:67019056-67019075	Msa1070690:intron	45.0%
	CACTCCCACATAAAAACCAG+TGG	+	chr7_2:67019064-67019083	None:intergenic	45.0%
	AGATAACAGGAACAGGCGTT+AGG	-	chr7_2:67019573-67019592	Msa1070690:five_prime_UTR	45.0%
	GATAACAGGAACAGGCGTTA+GGG	-	chr7_2:67019574-67019593	Msa1070690:five_prime_UTR	45.0%
!!	TATATATATATATATATATG+GGG	+	chr7_2:67019254-67019273	None:intergenic	5.0%
!!	TATATATATATATATATATG+GGG	+	chr7_2:67019254-67019273	None:intergenic	5.0%
	CATCCCTTGTCATGGAAGGT+TGG	-	chr7_2:67018114-67018133	Msa1070690:three_prime_UTR	50.0%
	ATACCTCTGATGCACAGACG+CGG	-	chr7_2:67018140-67018159	Msa1070690:three_prime_UTR	50.0%
	GTACAGTGAGCAGCGAAAAC+AGG	+	chr7_2:67018380-67018399	None:intergenic	50.0%
!!	AAGAAAATGGGTACCGGAGG+TGG	-	chr7_2:67019473-67019492	Msa1070690:five_prime_UTR	50.0%
	GAAATCGGAGGCAAAGAGAC+TGG	+	chr7_2:67019689-67019708	None:intergenic	50.0%
	TGGTGTGCACTAGAAATCGG+AGG	+	chr7_2:67019701-67019720	None:intergenic	50.0%
	CATCCCTTGTCATGGAAGGT+TGG	-	chr7_2:67018114-67018133	Msa1070690:three_prime_UTR	50.0%
	ATACCTCTGATGCACAGACG+CGG	-	chr7_2:67018140-67018159	Msa1070690:three_prime_UTR	50.0%
	GTACAGTGAGCAGCGAAAAC+AGG	+	chr7_2:67018380-67018399	None:intergenic	50.0%
!!	AAGAAAATGGGTACCGGAGG+TGG	-	chr7_2:67019473-67019492	Msa1070690:five_prime_UTR	50.0%
	GAAATCGGAGGCAAAGAGAC+TGG	+	chr7_2:67019689-67019708	None:intergenic	50.0%
	TGGTGTGCACTAGAAATCGG+AGG	+	chr7_2:67019701-67019720	None:intergenic	50.0%
	CCGTGTCGTACACAACTGAG+CGG	+	chr7_2:67018245-67018264	None:intergenic	55.0%
	CCGCTCAGTTGTGTACGACA+CGG	-	chr7_2:67018242-67018261	Msa1070690:exon	55.0%
!	TACACCCACCGCACCTTTTC+CGG	-	chr7_2:67018397-67018416	Msa1070690:CDS	55.0%
	GACGAGAAGGAAGCAGACGA+CGG	+	chr7_2:67018425-67018444	None:intergenic	55.0%
	GACATGGAGAGACGACGAGA+AGG	+	chr7_2:67018438-67018457	None:intergenic	55.0%
	TCCATGTCGTCGTCTACTCC+AGG	-	chr7_2:67018450-67018469	Msa1070690:CDS	55.0%
	ACCTGGAGTAGACGACGACA+TGG	+	chr7_2:67018454-67018473	None:intergenic	55.0%
	CTGAGCAGCTTCAACGACTG+AGG	-	chr7_2:67019615-67019634	Msa1070690:five_prime_UTR	55.0%
	CCGTGTCGTACACAACTGAG+CGG	+	chr7_2:67018245-67018264	None:intergenic	55.0%
	CCGCTCAGTTGTGTACGACA+CGG	-	chr7_2:67018242-67018261	Msa1070690:exon	55.0%
!	TACACCCACCGCACCTTTTC+CGG	-	chr7_2:67018397-67018416	Msa1070690:CDS	55.0%
	GACGAGAAGGAAGCAGACGA+CGG	+	chr7_2:67018425-67018444	None:intergenic	55.0%
	GACATGGAGAGACGACGAGA+AGG	+	chr7_2:67018438-67018457	None:intergenic	55.0%
	TCCATGTCGTCGTCTACTCC+AGG	-	chr7_2:67018450-67018469	Msa1070690:CDS	55.0%
	ACCTGGAGTAGACGACGACA+TGG	+	chr7_2:67018454-67018473	None:intergenic	55.0%
	CTGAGCAGCTTCAACGACTG+AGG	-	chr7_2:67019615-67019634	Msa1070690:five_prime_UTR	55.0%
	CAGCCGCGTCTGTGCATCAG+AGG	+	chr7_2:67018146-67018165	None:intergenic	65.0%
	CGGCTGAGATCCGCAGTGTC+CGG	-	chr7_2:67018160-67018179	Msa1070690:three_prime_UTR	65.0%
	TAGAACCGCGCCGGACACTG+CGG	+	chr7_2:67018173-67018192	None:intergenic	65.0%
	GGATACGGCTAGAACCGCGC+CGG	+	chr7_2:67018182-67018201	None:intergenic	65.0%
	AAGGAAGCAGACGACGGCGC+CGG	+	chr7_2:67018419-67018438	None:intergenic	65.0%
	CAGCCGCGTCTGTGCATCAG+AGG	+	chr7_2:67018146-67018165	None:intergenic	65.0%
	CGGCTGAGATCCGCAGTGTC+CGG	-	chr7_2:67018160-67018179	Msa1070690:three_prime_UTR	65.0%
	TAGAACCGCGCCGGACACTG+CGG	+	chr7_2:67018173-67018192	None:intergenic	65.0%
	GGATACGGCTAGAACCGCGC+CGG	+	chr7_2:67018182-67018201	None:intergenic	65.0%
	AAGGAAGCAGACGACGGCGC+CGG	+	chr7_2:67018419-67018438	None:intergenic	65.0%
	GAGATCCGCAGTGTCCGGCG+CGG	-	chr7_2:67018165-67018184	Msa1070690:three_prime_UTR	70.0%
!	GGCGCCGGAAAAGGTGCGGT+GGG	+	chr7_2:67018404-67018423	None:intergenic	70.0%
!	CGACGGCGCCGGAAAAGGTG+CGG	+	chr7_2:67018408-67018427	None:intergenic	70.0%
!	GCAGACGACGGCGCCGGAAA+AGG	+	chr7_2:67018413-67018432	None:intergenic	70.0%
	GAGATCCGCAGTGTCCGGCG+CGG	-	chr7_2:67018165-67018184	Msa1070690:three_prime_UTR	70.0%
!	GGCGCCGGAAAAGGTGCGGT+GGG	+	chr7_2:67018404-67018423	None:intergenic	70.0%
!	CGACGGCGCCGGAAAAGGTG+CGG	+	chr7_2:67018408-67018427	None:intergenic	70.0%
!	GCAGACGACGGCGCCGGAAA+AGG	+	chr7_2:67018413-67018432	None:intergenic	70.0%
!	CGGCGCCGGAAAAGGTGCGG+TGG	+	chr7_2:67018405-67018424	None:intergenic	75.0%
!	CGGCGCCGGAAAAGGTGCGG+TGG	+	chr7_2:67018405-67018424	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_2	gene	67018072	67019841	67018072	ID=Msa1070690;Name=Msa1070690
chr7_2	mRNA	67018072	67019841	67018072	ID=Msa1070690-mRNA-1;Parent=Msa1070690;Name=Msa1070690-mRNA-1;_AED=0.43;_eAED=0.43;_QI=381\|1\|1\|1\|1\|1\|2\|189\|92
chr7_2	exon	67018072	67018520	67018072	ID=Msa1070690-mRNA-1:exon:14484;Parent=Msa1070690-mRNA-1
chr7_2	exon	67019442	67019841	67019442	ID=Msa1070690-mRNA-1:exon:14483;Parent=Msa1070690-mRNA-1
chr7_2	five_prime_UTR	67019461	67019841	67019461	ID=Msa1070690-mRNA-1:five_prime_utr;Parent=Msa1070690-mRNA-1
chr7_2	CDS	67019442	67019460	67019442	ID=Msa1070690-mRNA-1:cds;Parent=Msa1070690-mRNA-1
chr7_2	CDS	67018261	67018520	67018261	ID=Msa1070690-mRNA-1:cds;Parent=Msa1070690-mRNA-1
chr7_2	three_prime_UTR	67018072	67018260	67018072	ID=Msa1070690-mRNA-1:three_prime_utr;Parent=Msa1070690-mRNA-1

Gene Sequence	>Msa1070690 ATGTCGTCGTCTACTCCAGAGATAAGTGCTCCTGGTTCTAGTCATGACAAAGAACAAGATGATAATGCCAAACCTTTACGGGCATATGTTAATAAGATAAAGAAAATGGGTACCGGAGGTGGAAACTATGAAAATCTATGCACTTTTTGTGAGTCAACTTTTAATGGGTCTTATACTAGAGTGAGAGCACATCTATTGAAGATAACAGGAACAGGCGTTAGGGTTTGTCAAAAAATAAAATCTGAGCAGCTTCAACGACTGAGGAATTTAGATAGTTAG
Protein sequence	>Msa1070690 MSSSTPEISAPGSSHDKEQDDNAKPLRAYVNKIKKMGTGGGNYENLCTFCESTFNGSYTRVRAHLLKITGTGVRVCQKIKSEQLQRLRNLDS*