AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0159770


Find 267 sgRNAs with CRISPR-Local

Find 483 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr1_4 gene 31262355 31269270 31262355 ID=Msa0159770;Name=Msa0159770
chr1_4 mRNA 31262355 31269270 31262355 ID=Msa0159770-mRNA-1;Parent=Msa0159770;Name=Msa0159770-mRNA-1;_AED=0.10;_eAED=0.11;_QI=21|0.88|0.94|1|1|1|18|244|1306
chr1_4 exon 31262355 31262861 31262355 ID=Msa0159770-mRNA-1:exon:9864;Parent=Msa0159770-mRNA-1
chr1_4 exon 31262974 31263075 31262974 ID=Msa0159770-mRNA-1:exon:9865;Parent=Msa0159770-mRNA-1
chr1_4 exon 31263159 31263445 31263159 ID=Msa0159770-mRNA-1:exon:9866;Parent=Msa0159770-mRNA-1
chr1_4 exon 31263546 31263612 31263546 ID=Msa0159770-mRNA-1:exon:9867;Parent=Msa0159770-mRNA-1
chr1_4 exon 31263709 31263964 31263709 ID=Msa0159770-mRNA-1:exon:9868;Parent=Msa0159770-mRNA-1
chr1_4 exon 31264055 31264209 31264055 ID=Msa0159770-mRNA-1:exon:9869;Parent=Msa0159770-mRNA-1
chr1_4 exon 31264385 31264591 31264385 ID=Msa0159770-mRNA-1:exon:9870;Parent=Msa0159770-mRNA-1
chr1_4 exon 31264724 31264837 31264724 ID=Msa0159770-mRNA-1:exon:9871;Parent=Msa0159770-mRNA-1
chr1_4 exon 31264950 31265063 31264950 ID=Msa0159770-mRNA-1:exon:9872;Parent=Msa0159770-mRNA-1
chr1_4 exon 31266131 31266298 31266131 ID=Msa0159770-mRNA-1:exon:9873;Parent=Msa0159770-mRNA-1
chr1_4 exon 31266384 31266731 31266384 ID=Msa0159770-mRNA-1:exon:9874;Parent=Msa0159770-mRNA-1
chr1_4 exon 31266821 31266954 31266821 ID=Msa0159770-mRNA-1:exon:9875;Parent=Msa0159770-mRNA-1
chr1_4 exon 31267070 31267394 31267070 ID=Msa0159770-mRNA-1:exon:9876;Parent=Msa0159770-mRNA-1
chr1_4 exon 31267478 31267673 31267478 ID=Msa0159770-mRNA-1:exon:9877;Parent=Msa0159770-mRNA-1
chr1_4 exon 31267765 31267814 31267765 ID=Msa0159770-mRNA-1:exon:9878;Parent=Msa0159770-mRNA-1
chr1_4 exon 31267914 31268306 31267914 ID=Msa0159770-mRNA-1:exon:9879;Parent=Msa0159770-mRNA-1
chr1_4 exon 31268422 31268538 31268422 ID=Msa0159770-mRNA-1:exon:9880;Parent=Msa0159770-mRNA-1
chr1_4 exon 31268625 31269270 31268625 ID=Msa0159770-mRNA-1:exon:9881;Parent=Msa0159770-mRNA-1
chr1_4 five_prime_UTR 31262355 31262375 31262355 ID=Msa0159770-mRNA-1:five_prime_utr;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31262376 31262861 31262376 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31262974 31263075 31262974 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31263159 31263445 31263159 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31263546 31263612 31263546 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31263709 31263964 31263709 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31264055 31264209 31264055 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31264385 31264591 31264385 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31264724 31264837 31264724 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31264950 31265063 31264950 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31266131 31266298 31266131 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31266384 31266731 31266384 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31266821 31266954 31266821 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31267070 31267394 31267070 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31267478 31267673 31267478 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31267765 31267814 31267765 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31267914 31268306 31267914 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31268422 31268538 31268422 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31268625 31269026 31268625 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 three_prime_UTR 31269027 31269270 31269027 ID=Msa0159770-mRNA-1:three_prime_utr;Parent=Msa0159770-mRNA-1
Gene Sequence

>Msa0159770

ATGGAGAAACGGTGGGAACCCGATACTTTCATAACACGATACTTTCATCGACTCAATAAAAAAAATTCAATAAAAGAAAAAACACAGAAACAATGGGTCTACGACGACACCACCACCACCACCACCATGGAGAAACGGTGCGAACCGTATACTTTCATCGATTCAATAAAAAAAAAAACACAGAAACAATGGGTTTACGAAGACGGGAAAATAGTTCACCGCAAAATCTCGTACGTCCCTGGTCTCTACAAAATCTTCGACATAATCCTCGTTCACGCTGCTGATAAAAAACGGCGAGATCCAACCATGAACCGGTTGAGAGTAGAAATTGATACTAAGATGAATGAGATTTCTGTTTGCTACAACGGTGCTCCATTAATAGGCGATGAAACATTTGATGATGTAATAAACATTTTTCATCTCACGAATAGTTACTCGACTTGTTTTTGGGTTGAGTTTGCTGATGAACTGGGAACTACGAGAGAGAATCATGTTACAGTTTTACATCTTGTAGGAAATGGACCTGTATTTTATATTTCTGCTATCATCTCGTTGCAGTATTTGTTTGAACTTTGGTCTTTGATTTTGGAGTTCCGTAATAATATGGATGTTAAGTTTGAGCGAATGGTAACCAAACGCAAAGTTGATGAATACTCGACCACGGTGACCTTTAAGCCTGACTTAACCAAGTTTGAAATGACCTGTCTTGAAAAGGATGTTGTAGCTTTGATGAAAAAGCGTGTGCTGGACATGGCAGGGTGCCTTGGTGTTACGGTTGAACTAAACAGCGAAGTGATTCCATTCAAGTCTTTCAAAGGTTATGCTGATTTCTTCTTGAATTGTGCTCAGGAGTCCAAACCCTTTTCCCTGCCAAGGACTCATGCCAAACTAAGTGATAGCTTGGAGATTTGCCTGAGTCTAAGTGACGGGAAGTTTCAACAGGTCAGCTTTGTTAACTCCATTGCTACAATTAAGGGTGGGACTCATGTTGATTACATCACCAAGCAAATTACTACCTATATAAAGAAGGAAGTATTGAAGAAGAAGGAGCATGTCAATGTGAATGCTGACACTGTGAAGAATCATTTGTGGGTTTTTGTCAATGCTCGGATTGACAACCCTGCCTTTCATTCTCAAACCAAAGAGATGTTAACCACTAAACCAGCTAGATTGGGTTTAAATTCAAGGCTGACTCATGATCAAAAGTCTGAAATTGCGAAAACCCTCCTACCACAGATACGGATACGTTTGAAACAAACGCATGTGGAAACGCATGTGGAAGCCATGTTGGCTGGCGGACCCAAGCGTGGCAAATGTACCTTGATTTTGACACATGGAGATTCTGCCTTTGCTATGGCCGGGGACTCTGCTGTGGTGGATCCAGACCTCTATGGTGTGTTTCCATTGACCAGCAAATTGCTCAATGTGAGGGACAGTAGAAAGCTATTAAAAAAGAAAGAAATTCAGATTCTGATGACCGTTCTTGGACTAGTGCGAAACAAGAAATACAGTGATGCAGAATCTTTGAGATATGGCCGGTTGATGATTATGGCCAATCAGGATGAAGATGGCGCTCACTTAAAAGGACTATTGATAAACTTCATTTATTCATTCTGGCCATCACTACTTAAAGTTTCAAAATTCATGTCTGTGTTTACCTTTCCCATTATAAAGGCTTCTAATTCAAAGAAGGGGAAGAAGTTATCATTTGATTCTATGCAGCAATATGAAGACTGGAAAAAAGAATTGGGTAACACTGCAAATGATTGGGAGATAAAGTACTGTAAGGGCTTGACTGCTGCGCAGGAAGTGAGAGAGTACTTTCAAGATCTTGATGAGCACAGGGCATATTTTGTTTGGGATGATGATGATGAACAAGATGGAACTTCCACTTCAATTGAGCTGGCATTCAGTAAAAAAGCTGAGGAATGGAAGGCTTGGATTTGTAACTCTCAGATGATGCAGCCTGGCACTTGTAATTATGAAAGAAAAAGTATAAAGTACAGGGATTTTGTTAACAAAGAACTTCTATTCTTCTCAATGAAAAATCTCCAAAGGTCCATTCCGTCTATGGTAGATGGCCTTACACTTGGTCAAAGGAAGACTCTTTTCTGCTCCTTTAAGATGAATTTGACCAAACAAACAGAAGTTTCCTTATTAACTGCTTATGTGACTGAACATTCTCATTGTCACTATGGTGAACAAAGTATTACTAGGACAATTATTGGAATGGCACAGGATTTTGTGGGTAGCAACAACATCAATCTTCTCATACCTTATGGTCAATTTGGCACTCGTGACCTGGGTGGTAAAGACCATGCAAGTTCCGAAAAGTTATACATTAAGCTAAATTGCGTTACTCGTCTCCTCTTCCCTGTGGATGATGATAAGCTTCTTGAATACTTGAATGAGGATGGGAGGTCCATTGAACCAAACTGGTACATACCAATCATTCCTCTCGTGCTTGTTAATGGTTGCCATGCCATGGGGACATGTTTTAGTTCTGATATTCCCAAATATCATCCATGTGAAATTATTGAGAATGTAAGACGTTTCTTGAAGGAAGAGGAAATGGTGCCAATGAAACCATGGTACAGAGGGTTCAGAGGAACCATTAAGAAAAGTGCCAAGGGCTATACAGTCAATGGTTTAGTGGAGAGAATAAATGAACAAACTGTCAGAATCGAAGAGCTTCCTATTCGAAAGTGGACTCAAGATTATAAGAAGTTCCTTGCCAAAAAAACTGCTCAGGCGCACATTGAGGGTTTTAGGCAAATAGGGGTTTATGAAATGGTAGACTTTAAAGTCAAGATGAAGCCAGAAAAAATAGCTACAACAGAGGACGAAGATAAAGAAGAATTATGCAGGAAGTTTAACCTGTCGTGCACTATTAGCACAAGCAACATGTATCTTTTTGATGCAGAGGGAAAAATTATGAAATATAACTCCCCAGAACAAATTCTTGAAGAGTTCTGTAGACTTCGGCTGAAGTATTATGCGAAGAGAAAGGAATATCTAGAGAAGAACATTAAACAACTTTTGCCGAGTTTAAGAATCAAACGAAATTTTATAACCGATGTTGTGAATGCGTCATGCCCGATCTACCGAAGAGCTGAATTTTTGATTGAGATTCTGAAGAAAGGTAACTCTGCAGAACCACAAGTTGCAGGTGCAAATGATTACAGTTCAAAAGAGCAGGAAGCTGATGAGCAGAAAACTGTAGCGACATTGGGTGACTATGAGTATCTTTCATCCTTGCCTCCTGAAAATTTCACCGATGAAAGCCTTGTGAAGCTGGAAGCTGAACTTGGTGAAAAGGAAAAGAAGCTGAAGACTTTGAAGGATTCCTCACCAGAGTCAATGTGGTTAAACGATCTCATGTTGTTTGAAAAGGAATTTGAGAAACTACAGAAAATTCAGACAGAAAAGGAACAAATCATATCAAGCATGGTGAAGAAAAAGAATGATTTTGCAATTGATGCAAAAAAGCTGTCACAACCACGAAAGAATAATCAGAAGGAAGCTGATGATGATATTCCATCAGATAGTGATAATGAAGTCAATGCTGTTGATGCTGATGACTTAGTTCAAGAGAAGGCTGCCCCAGATAAGAAGGGGCCTACAAAGGCAGCTACCACTTCCAAAAGAAAAGATGTTCAGCCAGCTGAAAGTGCAGGTTTATCACCCAATAGGAAGAAAGTGAGAAAGACGAGGGAGTCGCCATTTAACAAGAAAAGTGGTTCTATACTGGGCGGGGATGGTAACTTGGATTTAAGTTTAAATACAGATTTGTTCGATGACTCTACTAGCTATCCTACTGCAGTGGACGAGGTGGTTGAGAAATTGGAGTCTATGAGCGACAGTGATTATGATGGCGACAATGATTCTGATGATGAGTATCTGAGTGGTTTTATGCATTAG

Protein sequence

>Msa0159770

MEKRWEPDTFITRYFHRLNKKNSIKEKTQKQWVYDDTTTTTTMEKRCEPYTFIDSIKKKTQKQWVYEDGKIVHRKISYVPGLYKIFDIILVHAADKKRRDPTMNRLRVEIDTKMNEISVCYNGAPLIGDETFDDVINIFHLTNSYSTCFWVEFADELGTTRENHVTVLHLVGNGPVFYISAIISLQYLFELWSLILEFRNNMDVKFERMVTKRKVDEYSTTVTFKPDLTKFEMTCLEKDVVALMKKRVLDMAGCLGVTVELNSEVIPFKSFKGYADFFLNCAQESKPFSLPRTHAKLSDSLEICLSLSDGKFQQVSFVNSIATIKGGTHVDYITKQITTYIKKEVLKKKEHVNVNADTVKNHLWVFVNARIDNPAFHSQTKEMLTTKPARLGLNSRLTHDQKSEIAKTLLPQIRIRLKQTHVETHVEAMLAGGPKRGKCTLILTHGDSAFAMAGDSAVVDPDLYGVFPLTSKLLNVRDSRKLLKKKEIQILMTVLGLVRNKKYSDAESLRYGRLMIMANQDEDGAHLKGLLINFIYSFWPSLLKVSKFMSVFTFPIIKASNSKKGKKLSFDSMQQYEDWKKELGNTANDWEIKYCKGLTAAQEVREYFQDLDEHRAYFVWDDDDEQDGTSTSIELAFSKKAEEWKAWICNSQMMQPGTCNYERKSIKYRDFVNKELLFFSMKNLQRSIPSMVDGLTLGQRKTLFCSFKMNLTKQTEVSLLTAYVTEHSHCHYGEQSITRTIIGMAQDFVGSNNINLLIPYGQFGTRDLGGKDHASSEKLYIKLNCVTRLLFPVDDDKLLEYLNEDGRSIEPNWYIPIIPLVLVNGCHAMGTCFSSDIPKYHPCEIIENVRRFLKEEEMVPMKPWYRGFRGTIKKSAKGYTVNGLVERINEQTVRIEELPIRKWTQDYKKFLAKKTAQAHIEGFRQIGVYEMVDFKVKMKPEKIATTEDEDKEELCRKFNLSCTISTSNMYLFDAEGKIMKYNSPEQILEEFCRLRLKYYAKRKEYLEKNIKQLLPSLRIKRNFITDVVNASCPIYRRAEFLIEILKKGNSAEPQVAGANDYSSKEQEADEQKTVATLGDYEYLSSLPPENFTDESLVKLEAELGEKEKKLKTLKDSSPESMWLNDLMLFEKEFEKLQKIQTEKEQIISSMVKKKNDFAIDAKKLSQPRKNNQKEADDDIPSDSDNEVNAVDADDLVQEKAAPDKKGPTKAATTSKRKDVQPAESAGLSPNRKKVRKTRESPFNKKSGSILGGDGNLDLSLNTDLFDDSTSYPTAVDEVVEKLESMSDSDYDGDNDSDDEYLSGFMH*