AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0159770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0159770 MtrunA17_Chr1g0172461 83.557 1265 156 9 43 1292 1 1228 0.0 2095
Msa0159770 MtrunA17_Chr3g0089281 54.160 1250 444 26 49 1213 36 1241 0.0 1170
Msa0159770 MtrunA17_Chr3g0089281 42.105 152 44 4 1196 1304 1349 1499 3.68e-15 81.3
Msa0159770 MtrunA17_Chr3g0122961 49.801 1255 501 27 49 1250 20 1198 0.0 1033
Msa0159770 MtrunA17_Chr1g0187181 74.523 577 102 8 593 1134 30 596 0.0 839
Msa0159770 MtrunA17_Chr1g0187191 67.723 505 105 12 103 596 1 458 0.0 611
Msa0159770 MtrunA17_Chr8g0356371 75.641 390 48 6 931 1306 1 357 4.29e-173 517
Msa0159770 MtrunA17_Chr8g0356361 87.313 268 32 1 653 918 1 268 2.65e-164 491
Msa0159770 MtrunA17_Chr8g0356351 86.166 253 30 2 401 653 15 262 4.80e-148 447
Msa0159770 MtrunA17_Chr8g0356341 89.535 172 7 2 233 393 1 172 9.47e-97 307
Msa0159770 MtrunA17_Chr1g0172451 68.651 252 27 4 1068 1306 8 220 4.48e-79 259
Msa0159770 MtrunA17_Chr8g0356331 82.927 82 14 0 43 124 1 82 1.17e-41 147
Msa0159770 MtrunA17_Chr7g0256201 24.911 281 175 8 315 564 356 631 1.99e-17 88.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0159770 AT3G23890.1 45.373 1232 586 26 49 1215 48 1257 0.0 903
Msa0159770 AT3G23890.2 46.435 1178 546 24 49 1163 48 1203 0.0 900
Msa0159770 AT5G04130.1 25.714 315 195 10 315 598 362 668 2.74e-14 78.6
Msa0159770 AT3G10270.1 25.357 280 177 8 315 565 360 636 2.90e-14 78.2
Msa0159770 AT3G10270.2 24.643 280 179 7 315 565 370 646 3.51e-14 78.2

Find 267 sgRNAs with CRISPR-Local

Find 483 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTCACATGGATGATATT+TGG 0.103128 1_4:-31267144 None:intergenic
CTTTCTCACTTTCTTCCTAT+TGG 0.161147 1_4:-31268791 None:intergenic
TTTGTAGGCCCCTTCTTATC+TGG 0.163375 1_4:-31268709 None:intergenic
TAACTCCATTGCTACAATTA+AGG 0.175191 1_4:+31263720 Msa0159770:CDS
TGAACTTTGGTCTTTGATTT+TGG 0.185088 1_4:+31263054 Msa0159770:CDS
CTCATACCTTATGGTCAATT+TGG 0.190405 1_4:+31266696 Msa0159770:CDS
TTTGGTCAAATTCATCTTAA+AGG 0.198788 1_4:-31266544 None:intergenic
CTTGGTTAAGTCAGGCTTAA+AGG 0.212093 1_4:-31263238 None:intergenic
CAGATTCTGATGACCGTTCT+TGG 0.213082 1_4:+31264496 Msa0159770:CDS
TAAACTTCATTTATTCATTC+TGG 0.236113 1_4:+31264758 Msa0159770:CDS
AGTATTACTAGGACAATTAT+TGG 0.246023 1_4:+31266633 Msa0159770:CDS
ATTCCTCTCGTGCTTGTTAA+TGG 0.262770 1_4:+31267083 Msa0159770:CDS
ATACATGCTAACCTTTATAA+TGG 0.264605 1_4:-31264827 None:intergenic
TTTCTCACTTTCTTCCTATT+GGG 0.273602 1_4:-31268790 None:intergenic
CAAGAAAAGTGGTTCTATAC+TGG 0.280558 1_4:+31268834 Msa0159770:CDS
ATTTCACATGGATGATATTT+GGG 0.289353 1_4:-31267143 None:intergenic
CTCCAAGCTATCACTTAGTT+TGG 0.291086 1_4:-31263554 None:intergenic
GGACGAGGTGGTTGAGAAAT+TGG 0.292586 1_4:+31268930 Msa0159770:CDS
GAAGATGGCGCTCACTTAAA+AGG 0.298478 1_4:+31264727 Msa0159770:CDS
TTTAGTGGTTAACATCTCTT+TGG 0.298672 1_4:-31263905 None:intergenic
AATGTTTCATCGCCTATTAA+TGG 0.301163 1_4:-31262748 None:intergenic
AAGAAGGGTATACTTTGTTC+TGG 0.306802 1_4:-31267664 None:intergenic
CCAAAGGTCCATTCCGTCTA+TGG 0.315407 1_4:+31266479 Msa0159770:CDS
TAAGGAAACTTCTGTTTGTT+TGG 0.317608 1_4:-31266562 None:intergenic
GTTTACCTTTCCCATTATAA+AGG 0.318205 1_4:+31264816 Msa0159770:CDS
GAAGGAGTTCCGTAATAATA+TGG 0.331104 1_4:+31263155 Msa0159770:intron
ATTGAATCGATGAAAGTATA+CGG 0.334597 1_4:-31262520 None:intergenic
GAAGTGGTAGCTGCCTTTGT+AGG 0.334610 1_4:-31268724 None:intergenic
ATCAATCTTCTCATACCTTA+TGG 0.335295 1_4:+31266687 Msa0159770:CDS
CAATACTTCCTTCTTTATAT+AGG 0.346444 1_4:-31263782 None:intergenic
CCTCTGTACCATGGTTTCAT+TGG 0.349890 1_4:-31267209 None:intergenic
TTGTAGGCCCCTTCTTATCT+GGG 0.350030 1_4:-31268708 None:intergenic
CTAGATTGGGTTTAAATTCA+AGG 0.350360 1_4:+31263932 Msa0159770:CDS
TTCTACTCTCAACCGGTTCA+TGG 0.356994 1_4:-31262680 None:intergenic
AACTCCATTGCTACAATTAA+GGG 0.357057 1_4:+31263721 Msa0159770:CDS
AACCACTAAACCAGCTAGAT+TGG 0.360006 1_4:+31263918 Msa0159770:CDS
AGTCACATAAGCAGTTAATA+AGG 0.369267 1_4:-31266580 None:intergenic
TACAACGGTGCTCCATTAAT+AGG 0.371112 1_4:+31262736 Msa0159770:CDS
ATATGGCCGGTTGATGATTA+TGG 0.375514 1_4:+31264561 Msa0159770:CDS
CGATCTCATGTTGTTTGAAA+AGG 0.376087 1_4:+31268276 Msa0159770:CDS
AAAATACCAGTTTGGTTCAA+TGG 0.378162 1_4:-31266939 None:intergenic
TACATGCTAACCTTTATAAT+GGG 0.380148 1_4:-31264826 None:intergenic
CTTGTGAACAATTCAATTCA+AGG 0.386429 1_4:-31269159 None:intergenic
ACTTAACATCCATATTATTA+CGG 0.387230 1_4:-31263164 None:intergenic
CAAGGTACATTTGCCACGCT+TGG 0.394447 1_4:-31264157 None:intergenic
GCAAATAGGGGTTTATGAAA+TGG 0.395072 1_4:+31267486 Msa0159770:CDS
ACCTTCTGATTATTCTTTCG+TGG 0.395121 1_4:-31268518 None:intergenic
GAACATTCTCATTGTCACTA+TGG 0.396997 1_4:+31266603 Msa0159770:CDS
ACCCAATCTAGCTGGTTTAG+TGG 0.398255 1_4:-31263920 None:intergenic
GGAGAAACAAAATACCAGTT+TGG 0.399143 1_4:-31266947 None:intergenic
CCTTGGCAGGGAAAAGGGTT+TGG 0.399834 1_4:-31263424 None:intergenic
TCTTGAGTCCACTTTCGAAT+AGG 0.401645 1_4:-31267326 None:intergenic
CCTCACATTGAGCAATTTGC+TGG 0.402268 1_4:-31264440 None:intergenic
TTGAGCAATTTGCTGGTCAA+TGG 0.403408 1_4:-31264433 None:intergenic
CTGGACATGGCAGGGTGCCT+TGG 0.404628 1_4:+31263315 Msa0159770:CDS
GGTTGAGTTTGCTGATGAAC+TGG 0.409731 1_4:+31262825 Msa0159770:CDS
TGGGTAACACTGCAAATGAT+TGG 0.412089 1_4:+31265023 Msa0159770:CDS
GTATTCATCAACTTTGCGTT+TGG 0.412516 1_4:-31263202 None:intergenic
AACAAACCTTGGCAGGGAAA+AGG 0.414415 1_4:-31263430 None:intergenic
CGATGAAAGCCTTGTGAAGC+TGG 0.417064 1_4:+31268180 Msa0159770:CDS
TGCAGTATTTGTTTGAACTT+TGG 0.419562 1_4:+31263041 Msa0159770:CDS
ATTTCAAACTTGGTTAAGTC+AGG 0.419992 1_4:-31263246 None:intergenic
CTTTAAGTTACTCACCTGAT+TGG 0.421092 1_4:-31264584 None:intergenic
TCTGCAGAACCACAAGTTGC+AGG 0.422272 1_4:+31268052 Msa0159770:CDS
GGCTTGGATTTGTAACTCTC+AGG 0.424276 1_4:+31266277 Msa0159770:CDS
TTTCTTCTTGAATTGTGCTC+AGG 0.428203 1_4:+31263398 Msa0159770:CDS
GTTGATGATTATGGCCAATC+AGG 0.434812 1_4:+31264570 Msa0159770:CDS
TCTTCCTTTGACCAAGTGTA+AGG 0.436040 1_4:-31266509 None:intergenic
TCCATTCCGTCTATGGTAGA+TGG 0.437461 1_4:+31266486 Msa0159770:CDS
TATCAATTTCTACTCTCAAC+CGG 0.438637 1_4:-31262687 None:intergenic
AAGACAGGTCATTTCAAACT+TGG 0.440459 1_4:-31263256 None:intergenic
ACAAACCTTGGCAGGGAAAA+GGG 0.441751 1_4:-31263429 None:intergenic
GGCAGGGTGCCTTGGTGTTA+CGG 0.442995 1_4:+31263323 Msa0159770:CDS
GGAAGCTGAACTTGGTGAAA+AGG 0.443509 1_4:+31268201 Msa0159770:CDS
TTGATTGAGATTCTGAAGAA+AGG 0.443991 1_4:+31268025 Msa0159770:CDS
CCGTTTCTCCATGGCGGTGG+TGG 0.443996 1_4:-31262365 None:intergenic
GATGCAGAATCTTTGAGATA+TGG 0.445406 1_4:+31264544 Msa0159770:CDS
ACTGGGCGGGGATGGTAACT+TGG 0.447408 1_4:+31268852 Msa0159770:CDS
CTTGAATACTTGAATGAGGA+TGG 0.448433 1_4:+31266911 Msa0159770:CDS
AGAAGGGTATACTTTGTTCT+GGG 0.449255 1_4:-31267663 None:intergenic
GAAGGCTGCCCCAGATAAGA+AGG 0.453091 1_4:+31268699 Msa0159770:CDS
ACCACTAAACCAGCTAGATT+GGG 0.455351 1_4:+31263919 Msa0159770:CDS
GTGCAGGTTTATCACCCAAT+AGG 0.456055 1_4:+31268776 Msa0159770:CDS
AAAGAAGCTGAAGACTTTGA+AGG 0.456208 1_4:+31268225 Msa0159770:CDS
ATTCAGCTCTTCGGTAGATC+GGG 0.457510 1_4:-31268000 None:intergenic
CGCAAAATCTCGTACGTCCC+TGG 0.459799 1_4:+31262595 Msa0159770:CDS
CCATAGACGGAATGGACCTT+TGG 0.460174 1_4:-31266479 None:intergenic
CTCTTTGGTTTGAGAATGAA+AGG 0.461055 1_4:-31263890 None:intergenic
GTGGTGGATCCAGACCTCTA+TGG 0.461161 1_4:+31264403 Msa0159770:CDS
AATTCAGCTCTTCGGTAGAT+CGG 0.461161 1_4:-31268001 None:intergenic
GAAGGAAGTATTGAAGAAGA+AGG 0.461183 1_4:+31263792 Msa0159770:CDS
TTTCTTGAAGGAAGAGGAAA+TGG 0.462649 1_4:+31267184 Msa0159770:CDS
TTCAAGATCTTGATGAGCAC+AGG 0.467834 1_4:+31266165 Msa0159770:CDS
CAGAAAACTGTAGCGACATT+GGG 0.469067 1_4:+31268115 Msa0159770:CDS
CTTTCATAATTACAAGTGCC+AGG 0.470126 1_4:-31266393 None:intergenic
TATATAGGTAGTAATTTGCT+TGG 0.471571 1_4:-31263767 None:intergenic
TAACCTTTGAAAGACTTGAA+TGG 0.472512 1_4:-31263369 None:intergenic
AAGGTACATTTGCCACGCTT+GGG 0.473866 1_4:-31264156 None:intergenic
CACTGTGAAGAATCATTTGT+GGG 0.474415 1_4:+31263837 Msa0159770:CDS
CTTGGGTCCGCCAGCCAACA+TGG 0.477101 1_4:-31264139 None:intergenic
GTTGTTTGAAAAGGAATTTG+AGG 0.477485 1_4:+31268285 Msa0159770:CDS
AACTTCCACTTCAATTGAGC+TGG 0.478868 1_4:+31266226 Msa0159770:CDS
GTTAATGGTTGCCATGCCAT+GGG 0.481428 1_4:+31267098 Msa0159770:CDS
TGTTAATGGTTGCCATGCCA+TGG 0.481656 1_4:+31267097 Msa0159770:CDS
AAGCTGAGGAATGGAAGGCT+TGG 0.482595 1_4:+31266261 Msa0159770:CDS
GTATAGCAACAAACCTTGGC+AGG 0.482980 1_4:-31263437 None:intergenic
GACAATTATTGGAATGGCAC+AGG 0.484637 1_4:+31266644 Msa0159770:CDS
TGCCAAACTAAGTGATAGCT+TGG 0.485065 1_4:+31263552 Msa0159770:CDS
GGAGGTCCATTGAACCAAAC+TGG 0.485470 1_4:+31266933 Msa0159770:CDS
CAGCTTCACAAGGCTTTCAT+CGG 0.485684 1_4:-31268179 None:intergenic
GAATTTAAACCCAATCTAGC+TGG 0.486301 1_4:-31263928 None:intergenic
CGGTTCGCACCGTTTCTCCA+TGG 0.487278 1_4:-31262500 None:intergenic
TTGGTTTGAGAATGAAAGGC+AGG 0.487374 1_4:-31263886 None:intergenic
GGTTCTATACTGGGCGGGGA+TGG 0.488310 1_4:+31268844 Msa0159770:CDS
AACAATGGGTTTACGAAGAC+GGG 0.490122 1_4:+31262560 Msa0159770:CDS
GGCCGGGGACTCTGCTGTGG+TGG 0.490657 1_4:+31264387 Msa0159770:CDS
TTGGGAGATAAAGTACTGTA+AGG 0.492199 1_4:+31265042 Msa0159770:CDS
GATAAACCTGCACTTTCAGC+TGG 0.496114 1_4:-31268766 None:intergenic
TTTGAAACTTTAAGTAGTGA+TGG 0.496412 1_4:-31264781 None:intergenic
CATGTGGAAGCCATGTTGGC+TGG 0.498612 1_4:+31264129 Msa0159770:CDS
TTTCTCCATGGTGGTGGTGG+TGG 0.500007 1_4:-31262488 None:intergenic
GAATGTAAGACGTTTCTTGA+AGG 0.500170 1_4:+31267172 Msa0159770:CDS
GGCGAGATCCAACCATGAAC+CGG 0.500768 1_4:+31262668 Msa0159770:CDS
GGGTAACACTGCAAATGATT+GGG 0.500926 1_4:+31265024 Msa0159770:CDS
CTATGCAGCAATATGAAGAC+TGG 0.501085 1_4:+31264990 Msa0159770:CDS
ATAGCAGAAATATAAAATAC+AGG 0.503300 1_4:-31263010 None:intergenic
ATCTCCATGTGTCAAAATCA+AGG 0.504011 1_4:-31264175 None:intergenic
CCACCACCACCATGGAGAAA+CGG 0.506699 1_4:+31262491 Msa0159770:CDS
TATCGTGTTATGAAAGTATC+GGG 0.507123 1_4:-31262394 None:intergenic
GGATGTTAAGTTTGAGCGAA+TGG 0.507160 1_4:+31263176 Msa0159770:CDS
CCACCGTTTCTCCATGGCGG+TGG 0.510655 1_4:-31262368 None:intergenic
ACTCTCAACCGGTTCATGGT+TGG 0.511692 1_4:-31262676 None:intergenic
GTGAAGCTGGAAGCTGAACT+TGG 0.511887 1_4:+31268193 Msa0159770:CDS
TTGAAGAGTTCTGTAGACTT+CGG 0.512526 1_4:+31267768 Msa0159770:CDS
GCAGAAAACTGTAGCGACAT+TGG 0.512848 1_4:+31268114 Msa0159770:CDS
ACAGAAAATTCAGACAGAAA+AGG 0.514218 1_4:+31268427 Msa0159770:CDS
GATTGGCCATAATCATCAAC+CGG 0.514918 1_4:-31264567 None:intergenic
CTATACAGTCAATGGTTTAG+TGG 0.515308 1_4:+31267265 Msa0159770:CDS
AAGTGACGGGAAGTTTCAAC+AGG 0.516729 1_4:+31263591 Msa0159770:CDS
GCAGGCTTCTAATTCAAAGA+AGG 0.516971 1_4:+31264946 Msa0159770:intron
GCCAAGGGCTATACAGTCAA+TGG 0.517329 1_4:+31267257 Msa0159770:CDS
TGAAATGACCTGTCTTGAAA+AGG 0.518391 1_4:+31263263 Msa0159770:CDS
TCGTTTAACCACATTGACTC+TGG 0.519401 1_4:-31268256 None:intergenic
GCTTCTTGAATACTTGAATG+AGG 0.522976 1_4:+31266907 Msa0159770:CDS
ATTCCATTCAAGTCTTTCAA+AGG 0.523540 1_4:+31263366 Msa0159770:CDS
AAGATAAAGAAGAATTATGC+AGG 0.524744 1_4:+31267560 Msa0159770:CDS
ACTTCATTATCACTATCTGA+TGG 0.525055 1_4:-31268643 None:intergenic
ATCCACCACAGCAGAGTCCC+CGG 0.525916 1_4:-31264389 None:intergenic
AAGACGTTTCTTGAAGGAAG+AGG 0.526599 1_4:+31267178 Msa0159770:CDS
CCGTTTCTCCATGGTGGTGG+TGG 0.527006 1_4:-31262491 None:intergenic
TACTAGGACAATTATTGGAA+TGG 0.527050 1_4:+31266638 Msa0159770:CDS
CTATCCTACTGCAGTGGACG+AGG 0.527719 1_4:+31268915 Msa0159770:CDS
CGAGTGCCAAATTGACCATA+AGG 0.529069 1_4:-31266702 None:intergenic
AAGAGCTTCCTATTCGAAAG+TGG 0.529906 1_4:+31267318 Msa0159770:CDS
CCACCACCGCCATGGAGAAA+CGG 0.530577 1_4:+31262365 Msa0159770:exon
ACAGGGCTTGACTGCTGCGC+AGG 0.530779 1_4:+31266127 Msa0159770:intron
GGAAACACACCATAGAGGTC+TGG 0.531863 1_4:-31264412 None:intergenic
TGATTACAGTTCAAAAGAGC+AGG 0.534914 1_4:+31268081 Msa0159770:CDS
CCCACCCTTAATTGTAGCAA+TGG 0.534995 1_4:-31263725 None:intergenic
AAACAATGGGTTTACGAAGA+CGG 0.537049 1_4:+31262559 Msa0159770:CDS
GCACCGTTTCTCCATGGTGG+TGG 0.541303 1_4:-31262494 None:intergenic
TTGTGCTAATAGTGCACGAC+AGG 0.543087 1_4:-31267591 None:intergenic
ACAAGCACGAGAGGAATGAT+TGG 0.543192 1_4:-31267077 None:intergenic
GAGATTTCTGTTTGCTACAA+CGG 0.544216 1_4:+31262721 Msa0159770:CDS
GTATCGTGTTATGAAAGTAT+CGG 0.544757 1_4:-31262395 None:intergenic
ACCATTGACTGTATAGCCCT+TGG 0.545026 1_4:-31267258 None:intergenic
AGAAGCTTATCATCATCCAC+AGG 0.546585 1_4:-31266890 None:intergenic
AAAGTGGTTCTATACTGGGC+GGG 0.547050 1_4:+31268839 Msa0159770:CDS
GGGTTCCCACCGTTTCTCCA+TGG 0.547063 1_4:-31262374 None:intergenic
AATTACTACCTATATAAAGA+AGG 0.550935 1_4:+31263774 Msa0159770:CDS
CATTATCAGATGATGCAGCC+TGG 0.552645 1_4:+31266375 Msa0159770:intron
GTTCAGCCAGCTGAAAGTGC+AGG 0.556045 1_4:+31268760 Msa0159770:CDS
TTGAATACTTGAATGAGGAT+GGG 0.558328 1_4:+31266912 Msa0159770:CDS
GAATGCCAGCTCAATTGAAG+TGG 0.559058 1_4:-31266231 None:intergenic
AAGAAAAGTGGTTCTATACT+GGG 0.559137 1_4:+31268835 Msa0159770:CDS
CCTCTGAACCCTCTGTACCA+TGG 0.559837 1_4:-31267218 None:intergenic
TATCATCATCCACAGGGAAG+AGG 0.559869 1_4:-31266883 None:intergenic
TCATTTGCACCTGCAACTTG+TGG 0.561302 1_4:-31268061 None:intergenic
GAAGTATTATGCGAAGAGAA+AGG 0.562096 1_4:+31267793 Msa0159770:CDS
CAGGCTTCTAATTCAAAGAA+GGG 0.563679 1_4:+31264947 Msa0159770:intron
TCGCCATTTAACAAGAAAAG+TGG 0.563850 1_4:+31268823 Msa0159770:CDS
CAGAATCTTTGAGATATGGC+CGG 0.565635 1_4:+31264548 Msa0159770:CDS
AACTGCTCAGGCGCACATTG+AGG 0.565662 1_4:+31267373 Msa0159770:CDS
GATGGCCGGGGACTCTGCTG+TGG 0.566327 1_4:+31264384 Msa0159770:intron
ATGGTAGATGGCCTTACACT+TGG 0.567342 1_4:+31266498 Msa0159770:CDS
GCTAACCTTTATAATGGGAA+AGG 0.569062 1_4:-31264821 None:intergenic
GTTCAGCTTCCAGCTTCACA+AGG 0.569093 1_4:-31268189 None:intergenic
TTAAATTCAAGGCTGACTCA+TGG 0.569462 1_4:+31263943 Msa0159770:CDS
GCCATCTACCATAGACGGAA+TGG 0.570381 1_4:-31266487 None:intergenic
TTTGCCTGAGTCTAAGTGAC+GGG 0.571160 1_4:+31263578 Msa0159770:CDS
TCAATTTGGCACTCGTGACC+TGG 0.572606 1_4:+31266710 Msa0159770:CDS
ACTTCCCGTCACTTAGACTC+AGG 0.573380 1_4:-31263582 None:intergenic
AAGTGGTTCTATACTGGGCG+GGG 0.573596 1_4:+31268840 Msa0159770:CDS
CCATGGTACAGAGGGTTCAG+AGG 0.576601 1_4:+31267218 Msa0159770:CDS
AAGCGTGTGCTGGACATGGC+AGG 0.576604 1_4:+31263306 Msa0159770:CDS
AAACCCTCCTACCACAGATA+CGG 0.580858 1_4:+31264076 Msa0159770:CDS
TTTCGTTTGATTCTTAAACT+CGG 0.584558 1_4:-31267947 None:intergenic
GGAACAAATCATATCAAGCA+TGG 0.586483 1_4:+31268448 Msa0159770:CDS
TGTGTGATTTAGGATGAAGA+TGG 0.586547 1_4:+31264712 Msa0159770:intron
ACACTGTGAAGAATCATTTG+TGG 0.588327 1_4:+31263836 Msa0159770:CDS
TAAAACATGTCCCCATGGCA+TGG 0.588519 1_4:-31267109 None:intergenic
TCCATTGCTACAATTAAGGG+TGG 0.590306 1_4:+31263724 Msa0159770:CDS
GAAGAAAGTGAGAAAGACGA+GGG 0.592152 1_4:+31268798 Msa0159770:CDS
AACCATTAAGAAAAGTGCCA+AGG 0.592498 1_4:+31267241 Msa0159770:CDS
AGATAAGAAGGGGCCTACAA+AGG 0.593608 1_4:+31268711 Msa0159770:CDS
GTTGAGTTTGCTGATGAACT+GGG 0.596053 1_4:+31262826 Msa0159770:CDS
ACCATTAAGAAAAGTGCCAA+GGG 0.596058 1_4:+31267242 Msa0159770:CDS
TTGGCTGGCGGACCCAAGCG+TGG 0.599397 1_4:+31264144 Msa0159770:CDS
AACGCATGTGGAAGCCATGT+TGG 0.600042 1_4:+31264125 Msa0159770:CDS
TCTCTCTACCACCACCGCCA+TGG 0.601503 1_4:+31262357 Msa0159770:exon
TGTAGGCCCCTTCTTATCTG+GGG 0.601693 1_4:-31268707 None:intergenic
ATGGCCTTACACTTGGTCAA+AGG 0.601878 1_4:+31266505 Msa0159770:CDS
CCACCGCCATGGAGAAACGG+TGG 0.603962 1_4:+31262368 Msa0159770:exon
GATGATGATGATGAACAAGA+TGG 0.605111 1_4:+31266203 Msa0159770:CDS
AAGGCTGCCCCAGATAAGAA+GGG 0.605373 1_4:+31268700 Msa0159770:CDS
ACATTCTCAATAATTTCACA+TGG 0.607220 1_4:-31267155 None:intergenic
ATGGTGAACAAAGTATTACT+AGG 0.609156 1_4:+31266622 Msa0159770:CDS
CCAGCAAATTGCTCAATGTG+AGG 0.610232 1_4:+31264440 Msa0159770:CDS
TTCAAACGTATCCGTATCTG+TGG 0.610331 1_4:-31264087 None:intergenic
ATGAGCGACAGTGATTATGA+TGG 0.613838 1_4:+31268958 Msa0159770:CDS
TAGACAACAACTTACAGCAA+AGG 0.613909 1_4:-31264202 None:intergenic
GTATCCGTATCTGTGGTAGG+AGG 0.614004 1_4:-31264080 None:intergenic
ACGTTTGAAACAAACGCATG+TGG 0.614278 1_4:+31264101 Msa0159770:CDS
TATCCGTATCTGTGGTAGGA+GGG 0.618306 1_4:-31264079 None:intergenic
GTAAGGCCATCTACCATAGA+CGG 0.619440 1_4:-31266492 None:intergenic
GAAGGGTATACTTTGTTCTG+GGG 0.620162 1_4:-31267662 None:intergenic
CAGCAAATTGCTCAATGTGA+GGG 0.623354 1_4:+31264441 Msa0159770:CDS
GTTTCGCACTAGTCCAAGAA+CGG 0.624699 1_4:-31264509 None:intergenic
AACGCATGTGGAAACGCATG+TGG 0.625648 1_4:+31264113 Msa0159770:CDS
AACGTATCCGTATCTGTGGT+AGG 0.625919 1_4:-31264083 None:intergenic
CAATGAAACCATGGTACAGA+GGG 0.626920 1_4:+31267210 Msa0159770:CDS
GGAAGAAAGTGAGAAAGACG+AGG 0.627713 1_4:+31268797 Msa0159770:CDS
TACTAGCTATCCTACTGCAG+TGG 0.628883 1_4:+31268909 Msa0159770:CDS
TACTCGTCTCCTCTTCCCTG+TGG 0.629908 1_4:+31266874 Msa0159770:CDS
TCAAGATCTTGATGAGCACA+GGG 0.632484 1_4:+31266166 Msa0159770:CDS
AGAACTAAAACATGTCCCCA+TGG 0.633388 1_4:-31267114 None:intergenic
TGGTTTGAGAATGAAAGGCA+GGG 0.636069 1_4:-31263885 None:intergenic
CACCGCCATGGAGAAACGGT+GGG 0.636992 1_4:+31262369 Msa0159770:exon
AGCGTGTGCTGGACATGGCA+GGG 0.637743 1_4:+31263307 Msa0159770:CDS
TCCTACTGCAGTGGACGAGG+TGG 0.642320 1_4:+31268918 Msa0159770:CDS
GTGGAAGCCATGTTGGCTGG+CGG 0.643435 1_4:+31264132 Msa0159770:CDS
ACCACGAAAGAATAATCAGA+AGG 0.646310 1_4:+31268517 Msa0159770:CDS
TAACCACATTGACTCTGGTG+AGG 0.646573 1_4:-31268251 None:intergenic
ATTTGCCTGAGTCTAAGTGA+CGG 0.647908 1_4:+31263577 Msa0159770:CDS
AGGCTGCCCCAGATAAGAAG+GGG 0.650699 1_4:+31268701 Msa0159770:CDS
TATAGCAACAAACCTTGGCA+GGG 0.650879 1_4:-31263436 None:intergenic
ACCACCTCGTCCACTGCAGT+AGG 0.653309 1_4:-31268919 None:intergenic
AAATGGTGCCAATGAAACCA+TGG 0.654204 1_4:+31267201 Msa0159770:CDS
TTCGCACCGTTTCTCCATGG+TGG 0.656457 1_4:-31262497 None:intergenic
CCATTGCTACAATTAAGGGT+GGG 0.656973 1_4:+31263725 Msa0159770:CDS
AATACTTGAATGAGGATGGG+AGG 0.657573 1_4:+31266915 Msa0159770:CDS
CCAATGAAACCATGGTACAG+AGG 0.662442 1_4:+31267209 Msa0159770:CDS
TGATGACTTAGTTCAAGAGA+AGG 0.663185 1_4:+31268681 Msa0159770:CDS
CAACCATTAACAAGCACGAG+AGG 0.665375 1_4:-31267086 None:intergenic
AGGCTTCTAATTCAAAGAAG+GGG 0.666064 1_4:+31264948 Msa0159770:intron
TCAATGGAAACACACCATAG+AGG 0.667555 1_4:-31264417 None:intergenic
TTCCCACCGTTTCTCCATGG+CGG 0.682133 1_4:-31262371 None:intergenic
ATTCCTCACCAGAGTCAATG+TGG 0.683714 1_4:+31268248 Msa0159770:CDS
AAAAGTGGTTCTATACTGGG+CGG 0.686204 1_4:+31268838 Msa0159770:CDS
TGAACTGGGAACTACGAGAG+AGG 0.689443 1_4:+31262840 Msa0159770:CDS
GAAGCTTATCATCATCCACA+GGG 0.701768 1_4:-31266889 None:intergenic
GCATGACGCATTCACAACAT+CGG 0.706357 1_4:-31267978 None:intergenic
TTAGTTCAACCGTAACACCA+AGG 0.728233 1_4:-31263332 None:intergenic
TCTGATGATGAGTATCTGAG+TGG 0.731428 1_4:+31268991 Msa0159770:CDS
TTAATGGTTGCCATGCCATG+GGG 0.732905 1_4:+31267099 Msa0159770:CDS
AGTTGATGAATACTCGACCA+CGG 0.738082 1_4:+31263212 Msa0159770:CDS
GTCAGGCTTAAAGGTCACCG+TGG 0.740766 1_4:-31263229 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGAACTAAAATTAAATTT+AGG + chr1_4:31262926-31262945 Msa0159770:intron 10.0%
!!! TTTTTTATTTTTTTTTTACC+AGG + chr1_4:31263687-31263706 Msa0159770:intron 10.0%
!!! AAAGTATATATTTCAAATTT+TGG + chr1_4:31264252-31264271 Msa0159770:intron 10.0%
!! AGTCATAAATATAAAAAATA+TGG - chr1_4:31265086-31265105 None:intergenic 10.0%
!!! AATAAATTGATTAGATTTTA+TGG + chr1_4:31265496-31265515 Msa0159770:intron 10.0%
!!! TTTTTTTTTTTTTTTGAACA+AGG + chr1_4:31265530-31265549 Msa0159770:intron 10.0%
!! AATAATAAATGAAAAGTAAA+TGG + chr1_4:31265640-31265659 Msa0159770:intron 10.0%
!! ATAATAAATGAAAAGTAAAT+GGG + chr1_4:31265641-31265660 Msa0159770:intron 10.0%
!!! TTTTGATTTTTGATTTTTCT+AGG + chr1_4:31262888-31262907 Msa0159770:intron 15.0%
!!! TTTGATTTTTGATTTTTCTA+GGG + chr1_4:31262889-31262908 Msa0159770:intron 15.0%
!! CATAAATATAAAAAATATGG+AGG - chr1_4:31265083-31265102 None:intergenic 15.0%
!!! AATTTGCTTTTTTTTTTTTG+AGG + chr1_4:31265427-31265446 Msa0159770:intron 15.0%
!!! ATTTGCTTTTTTTTTTTTGA+GGG + chr1_4:31265428-31265447 Msa0159770:intron 15.0%
!!! CGTTTTAACTTTTTTATAAT+AGG - chr1_4:31265604-31265623 None:intergenic 15.0%
!!! TTTTGCTTATTTCAAATTTT+TGG + chr1_4:31266097-31266116 Msa0159770:intron 15.0%
!! TTATTAATAAGTAACAACTA+AGG + chr1_4:31266999-31267018 Msa0159770:intron 15.0%
!! AGAAAATTTACATATGAAAA+AGG - chr1_4:31267449-31267468 None:intergenic 15.0%
!! AAGTAATTATACATAAAGAA+GGG - chr1_4:31267682-31267701 None:intergenic 15.0%
!! AAAGTAATTATACATAAAGA+AGG - chr1_4:31267683-31267702 None:intergenic 15.0%
!! GTTGATATATATTAATAGAT+AGG - chr1_4:31267867-31267886 None:intergenic 15.0%
!! AAAAAAAAACACAGAAACAA+TGG + chr1_4:31262545-31262564 Msa0159770:CDS 20.0%
!! AAAAAAAACACAGAAACAAT+GGG + chr1_4:31262546-31262565 Msa0159770:CDS 20.0%
!! ATCAAAAATCAAAATCTCAA+AGG - chr1_4:31262882-31262901 None:intergenic 20.0%
!! ATAGCAGAAATATAAAATAC+AGG - chr1_4:31263013-31263032 None:intergenic 20.0%
!! ACTTAACATCCATATTATTA+CGG - chr1_4:31263167-31263186 None:intergenic 20.0%
!! ATCATGTTAGATAAAAACAA+AGG - chr1_4:31263509-31263528 None:intergenic 20.0%
!!! TGTTTTTATCTAACATGATT+TGG + chr1_4:31263510-31263529 Msa0159770:intron 20.0%
!! AATTACTACCTATATAAAGA+AGG + chr1_4:31263774-31263793 Msa0159770:CDS 20.0%
!! AATTTGAACTATTATAATCG+CGG - chr1_4:31264690-31264709 None:intergenic 20.0%
!! TTCAAATTTATGTGTGATTT+AGG + chr1_4:31264702-31264721 Msa0159770:intron 20.0%
!! TAAACTTCATTTATTCATTC+TGG + chr1_4:31264758-31264777 Msa0159770:CDS 20.0%
!!! TTTTTTGAACAAGGATTTTA+TGG + chr1_4:31265539-31265558 Msa0159770:intron 20.0%
!!! AAAGAAAAAGTATAAAGTAC+AGG + chr1_4:31266412-31266431 Msa0159770:CDS 20.0%
!!! AAGAAAAAGTATAAAGTACA+GGG + chr1_4:31266413-31266432 Msa0159770:CDS 20.0%
!! TGCAATAAAAAAAATTATGC+CGG - chr1_4:31266745-31266764 None:intergenic 20.0%
!! TTTCTTGAACTTATATTCAA+TGG + chr1_4:31266780-31266799 Msa0159770:intron 20.0%
!!! TAGCTTAATGTATAACTTTT+CGG - chr1_4:31266846-31266865 None:intergenic 20.0%
!!! TATATGGTAAGTAAAAGTAT+AGG - chr1_4:31267407-31267426 None:intergenic 20.0%
!! TCAAGGAATAGAAAAAAATA+CGG - chr1_4:31269145-31269164 None:intergenic 20.0%
!!! GTTAGTTTTTGTATAAATTG+AGG + chr1_4:31269181-31269200 Msa0159770:three_prime_UTR 20.0%
! AAGAAAAAACACAGAAACAA+TGG + chr1_4:31262449-31262468 Msa0159770:CDS 25.0%
! AGAAAAAACACAGAAACAAT+GGG + chr1_4:31262450-31262469 Msa0159770:CDS 25.0%
!! ATTGAATCGATGAAAGTATA+CGG - chr1_4:31262523-31262542 None:intergenic 25.0%
!!! TTTTTGATTTTTCTAGGGTT+AGG + chr1_4:31262894-31262913 Msa0159770:intron 25.0%
! AAAAATACAACCAAGACAAA+TGG - chr1_4:31263128-31263147 None:intergenic 25.0%
!!! GTTGTATTTTTGTGTTATGA+AGG + chr1_4:31263137-31263156 Msa0159770:intron 25.0%
!!! ATGATTTGGTTGCTTTTATT+AGG + chr1_4:31263524-31263543 Msa0159770:intron 25.0%
!!! TATATAGGTAGTAATTTGCT+TGG - chr1_4:31263770-31263789 None:intergenic 25.0%
! CAATACTTCCTTCTTTATAT+AGG - chr1_4:31263785-31263804 None:intergenic 25.0%
! GTTAGTAATTCTTCATTTGT+TGG + chr1_4:31263965-31263984 Msa0159770:intron 25.0%
! GCTATCAAATTAACATGAAA+TGG + chr1_4:31264001-31264020 Msa0159770:intron 25.0%
!! ATTTTTCATTTAAGCACAAG+CGG + chr1_4:31264282-31264301 Msa0159770:intron 25.0%
! AAAAGTAGTCATTAAGTTCA+AGG - chr1_4:31264355-31264374 None:intergenic 25.0%
!!! TGAACTTAATGACTACTTTT+TGG + chr1_4:31264355-31264374 Msa0159770:intron 25.0%
! ACATAGAAACATAAAAGTCA+AGG - chr1_4:31264627-31264646 None:intergenic 25.0%
!!! CTTTTATGTTTCTATGTATG+AGG + chr1_4:31264630-31264649 Msa0159770:intron 25.0%
! ATTTGAACTATTATAATCGC+GGG - chr1_4:31264689-31264708 None:intergenic 25.0%
!! TTTGAAACTTTAAGTAGTGA+TGG - chr1_4:31264784-31264803 None:intergenic 25.0%
! TACATGCTAACCTTTATAAT+GGG - chr1_4:31264829-31264848 None:intergenic 25.0%
! ATACATGCTAACCTTTATAA+TGG - chr1_4:31264830-31264849 None:intergenic 25.0%
! AAGTATAAACCACTATATAC+AGG + chr1_4:31265108-31265127 Msa0159770:intron 25.0%
! AGTATAAACCACTATATACA+GGG + chr1_4:31265109-31265128 Msa0159770:intron 25.0%
!! GATACTATCTAATTCCATTT+TGG + chr1_4:31265275-31265294 Msa0159770:intron 25.0%
! ACTAAATGGAGCAAAATAAA+AGG - chr1_4:31265690-31265709 None:intergenic 25.0%
!! AACACAATAAACGATTTTTG+CGG + chr1_4:31265995-31266014 Msa0159770:intron 25.0%
!! ACAAAAAGTAATTGGTTTAG+GGG - chr1_4:31266054-31266073 None:intergenic 25.0%
!! CACAAAAAGTAATTGGTTTA+GGG - chr1_4:31266055-31266074 None:intergenic 25.0%
!! ACACAAAAAGTAATTGGTTT+AGG - chr1_4:31266056-31266075 None:intergenic 25.0%
! TTAGGAACACAAAAAGTAAT+TGG - chr1_4:31266062-31266081 None:intergenic 25.0%
! AAAGACTGAATGAAAGAATT+AGG - chr1_4:31266080-31266099 None:intergenic 25.0%
!!! AAATTTTTGGTGTTTGTACA+GGG + chr1_4:31266110-31266129 Msa0159770:intron 25.0%
! GTGTTAGAAAATTGATGTAT+TGG - chr1_4:31266314-31266333 None:intergenic 25.0%
! TTTGGTCAAATTCATCTTAA+AGG - chr1_4:31266547-31266566 None:intergenic 25.0%
! AGTATTACTAGGACAATTAT+TGG + chr1_4:31266633-31266652 Msa0159770:CDS 25.0%
! AAAATAGCCATTACAAAGAA+AGG - chr1_4:31266971-31266990 None:intergenic 25.0%
!! TTTCTTTGTAATGGCTATTT+TGG + chr1_4:31266970-31266989 Msa0159770:intron 25.0%
! ATTTCACATGGATGATATTT+GGG - chr1_4:31267146-31267165 None:intergenic 25.0%
! AATTTCACATGGATGATATT+TGG - chr1_4:31267147-31267166 None:intergenic 25.0%
! ACATTCTCAATAATTTCACA+TGG - chr1_4:31267158-31267177 None:intergenic 25.0%
!! ATGTAAATTTTCTTTGTTGC+AGG + chr1_4:31267456-31267475 Msa0159770:intron 25.0%
!! TGTAAATTTTCTTTGTTGCA+GGG + chr1_4:31267457-31267476 Msa0159770:intron 25.0%
! AAGATAAAGAAGAATTATGC+AGG + chr1_4:31267560-31267579 Msa0159770:CDS 25.0%
! TTTCGTTTGATTCTTAAACT+CGG - chr1_4:31267950-31267969 None:intergenic 25.0%
! AAGAGAGACAATTACTTATT+TGG + chr1_4:31268309-31268328 Msa0159770:intron 25.0%
!! TATCGTGTTATGAAAGTATC+GGG - chr1_4:31262397-31262416 None:intergenic 30.0%
! GTATCGTGTTATGAAAGTAT+CGG - chr1_4:31262398-31262417 None:intergenic 30.0%
TATCAATTTCTACTCTCAAC+CGG - chr1_4:31262690-31262709 None:intergenic 30.0%
AATGTTTCATCGCCTATTAA+TGG - chr1_4:31262751-31262770 None:intergenic 30.0%
!! ATAGTTACTCGACTTGTTTT+TGG + chr1_4:31262803-31262822 Msa0159770:CDS 30.0%
!! TAGTTACTCGACTTGTTTTT+GGG + chr1_4:31262804-31262823 Msa0159770:CDS 30.0%
TCAAAATCTCAAAGGAAGAA+AGG - chr1_4:31262874-31262893 None:intergenic 30.0%
!!! ATTTTTCTAGGGTTAGGTTT+TGG + chr1_4:31262900-31262919 Msa0159770:intron 30.0%
! GTTACAGTTTTACATCTTGT+AGG + chr1_4:31262980-31262999 Msa0159770:CDS 30.0%
! GTTTTACATCTTGTAGGAAA+TGG + chr1_4:31262986-31263005 Msa0159770:CDS 30.0%
TGCAGTATTTGTTTGAACTT+TGG + chr1_4:31263041-31263060 Msa0159770:CDS 30.0%
!! TGAACTTTGGTCTTTGATTT+TGG + chr1_4:31263054-31263073 Msa0159770:CDS 30.0%
! ATGCAAGTGCTCAAAATTTT+TGG + chr1_4:31263091-31263110 Msa0159770:intron 30.0%
!! CTTTGATTTTCCATTTGTCT+TGG + chr1_4:31263115-31263134 Msa0159770:intron 30.0%
ATTTCAAACTTGGTTAAGTC+AGG - chr1_4:31263249-31263268 None:intergenic 30.0%
ATTCCATTCAAGTCTTTCAA+AGG + chr1_4:31263366-31263385 Msa0159770:CDS 30.0%
! TAACCTTTGAAAGACTTGAA+TGG - chr1_4:31263372-31263391 None:intergenic 30.0%
! TAAAGTATAGTGTAACTTGC+AGG + chr1_4:31263629-31263648 Msa0159770:intron 30.0%
TAACTCCATTGCTACAATTA+AGG + chr1_4:31263720-31263739 Msa0159770:CDS 30.0%
AACTCCATTGCTACAATTAA+GGG + chr1_4:31263721-31263740 Msa0159770:CDS 30.0%
TTTAGTGGTTAACATCTCTT+TGG - chr1_4:31263908-31263927 None:intergenic 30.0%
CTAGATTGGGTTTAAATTCA+AGG + chr1_4:31263932-31263951 Msa0159770:CDS 30.0%
!!! ACTACTTTTTGGTTTGAAGA+TGG + chr1_4:31264366-31264385 Msa0159770:intron 30.0%
TTTGAACTATTATAATCGCG+GGG - chr1_4:31264688-31264707 None:intergenic 30.0%
GTTTACCTTTCCCATTATAA+AGG + chr1_4:31264816-31264835 Msa0159770:CDS 30.0%
ATACATTTATCTTTCTCTGC+AGG + chr1_4:31264928-31264947 Msa0159770:intron 30.0%
TGAAGACTGGAAAAAAGAAT+TGG + chr1_4:31265003-31265022 Msa0159770:CDS 30.0%
GAAGACTGGAAAAAAGAATT+GGG + chr1_4:31265004-31265023 Msa0159770:CDS 30.0%
GTATAAACCACTATATACAG+GGG + chr1_4:31265110-31265129 Msa0159770:intron 30.0%
TATAAACCACTATATACAGG+GGG + chr1_4:31265111-31265130 Msa0159770:intron 30.0%
!!! TTTGTTTTACTTGCATCTGT+GGG + chr1_4:31265155-31265174 Msa0159770:intron 30.0%
!! TATCTAATTCCATTTTGGTG+TGG + chr1_4:31265280-31265299 Msa0159770:intron 30.0%
!!! TTTTTTCTGCATATCACTCA+TGG + chr1_4:31265313-31265332 Msa0159770:intron 30.0%
!!! TTGTTGGTATTTTAAAGCTG+TGG + chr1_4:31265360-31265379 Msa0159770:intron 30.0%
GGAACAAAAAAAAGAAACGT+TGG + chr1_4:31265449-31265468 Msa0159770:intron 30.0%
! ATTTAGTGGATCTCACTAAA+TGG - chr1_4:31265704-31265723 None:intergenic 30.0%
CACTTTATTGCCTATAGAAA+AGG + chr1_4:31265863-31265882 Msa0159770:intron 30.0%
! GTTTATTGTGTTGACATTGA+TGG - chr1_4:31265987-31266006 None:intergenic 30.0%
!!! CAAATTTTTGGTGTTTGTAC+AGG + chr1_4:31266109-31266128 Msa0159770:intron 30.0%
TCTCAATGAAAAATCTCCAA+AGG + chr1_4:31266463-31266482 Msa0159770:CDS 30.0%
TAAGGAAACTTCTGTTTGTT+TGG - chr1_4:31266565-31266584 None:intergenic 30.0%
AGTCACATAAGCAGTTAATA+AGG - chr1_4:31266583-31266602 None:intergenic 30.0%
! ATGGTGAACAAAGTATTACT+AGG + chr1_4:31266622-31266641 Msa0159770:CDS 30.0%
TACTAGGACAATTATTGGAA+TGG + chr1_4:31266638-31266657 Msa0159770:CDS 30.0%
ATCAATCTTCTCATACCTTA+TGG + chr1_4:31266687-31266706 Msa0159770:CDS 30.0%
TTGAATACTTGAATGAGGAT+GGG + chr1_4:31266912-31266931 Msa0159770:CDS 30.0%
! AAAATACCAGTTTGGTTCAA+TGG - chr1_4:31266942-31266961 None:intergenic 30.0%
TGTTTCTCCTTTCTTTGTAA+TGG + chr1_4:31266961-31266980 Msa0159770:intron 30.0%
TGAATCAGTTCAACTTTGAT+GGG - chr1_4:31267028-31267047 None:intergenic 30.0%
TTGAATCAGTTCAACTTTGA+TGG - chr1_4:31267029-31267048 None:intergenic 30.0%
TTACTTACCATATACACCAT+AGG + chr1_4:31267413-31267432 Msa0159770:intron 30.0%
AGATTTACCTATGGTGTATA+TGG - chr1_4:31267423-31267442 None:intergenic 30.0%
! AAAAGGTACAGATTTACCTA+TGG - chr1_4:31267432-31267451 None:intergenic 30.0%
!!! TCTGTTGTAGCTATTTTTTC+TGG - chr1_4:31267535-31267554 None:intergenic 30.0%
AGAAAAAATAGCTACAACAG+AGG + chr1_4:31267534-31267553 Msa0159770:CDS 30.0%
! ATGTATCTTTTTGATGCAGA+GGG + chr1_4:31267619-31267638 Msa0159770:CDS 30.0%
CAATCAAAAATTCAGCTCTT+CGG - chr1_4:31268012-31268031 None:intergenic 30.0%
! TTGATTGAGATTCTGAAGAA+AGG + chr1_4:31268025-31268044 Msa0159770:CDS 30.0%
GTTGTTTGAAAAGGAATTTG+AGG + chr1_4:31268285-31268304 Msa0159770:CDS 30.0%
ACAGAAAATTCAGACAGAAA+AGG + chr1_4:31268427-31268446 Msa0159770:CDS 30.0%
AACATTGCAATACAGGAAAT+TGG - chr1_4:31268554-31268573 None:intergenic 30.0%
ACTTCATTATCACTATCTGA+TGG - chr1_4:31268646-31268665 None:intergenic 30.0%
!! AACATCTTTTCTTTTGGAAG+TGG - chr1_4:31268743-31268762 None:intergenic 30.0%
TTTCTCACTTTCTTCCTATT+GGG - chr1_4:31268793-31268812 None:intergenic 30.0%
!! GAACCACTTTTCTTGTTAAA+TGG - chr1_4:31268829-31268848 None:intergenic 30.0%
! AAGAAAAGTGGTTCTATACT+GGG + chr1_4:31268835-31268854 Msa0159770:CDS 30.0%
CTTGTGAACAATTCAATTCA+AGG - chr1_4:31269162-31269181 None:intergenic 30.0%
! AAACAATGGGTTTACGAAGA+CGG + chr1_4:31262559-31262578 Msa0159770:CDS 35.0%
TTCACGCTGCTGATAAAAAA+CGG + chr1_4:31262647-31262666 Msa0159770:CDS 35.0%
! GAGATTTCTGTTTGCTACAA+CGG + chr1_4:31262721-31262740 Msa0159770:CDS 35.0%
GAAGGAGTTCCGTAATAATA+TGG + chr1_4:31263155-31263174 Msa0159770:intron 35.0%
GTATTCATCAACTTTGCGTT+TGG - chr1_4:31263205-31263224 None:intergenic 35.0%
AAGACAGGTCATTTCAAACT+TGG - chr1_4:31263259-31263278 None:intergenic 35.0%
TGAAATGACCTGTCTTGAAA+AGG + chr1_4:31263263-31263282 Msa0159770:CDS 35.0%
!! TACAACATCCTTTTCAAGAC+AGG - chr1_4:31263274-31263293 None:intergenic 35.0%
TTTCTTCTTGAATTGTGCTC+AGG + chr1_4:31263398-31263417 Msa0159770:CDS 35.0%
ATCTGTATAGCAACAAACCT+TGG - chr1_4:31263444-31263463 None:intergenic 35.0%
!! GAAGGAAGTATTGAAGAAGA+AGG + chr1_4:31263792-31263811 Msa0159770:CDS 35.0%
ACACTGTGAAGAATCATTTG+TGG + chr1_4:31263836-31263855 Msa0159770:CDS 35.0%
CACTGTGAAGAATCATTTGT+GGG + chr1_4:31263837-31263856 Msa0159770:CDS 35.0%
!! CTCTTTGGTTTGAGAATGAA+AGG - chr1_4:31263893-31263912 None:intergenic 35.0%
GAATTTAAACCCAATCTAGC+TGG - chr1_4:31263931-31263950 None:intergenic 35.0%
! TTAAATTCAAGGCTGACTCA+TGG + chr1_4:31263943-31263962 Msa0159770:CDS 35.0%
!! TGTACCTTGATTTTGACACA+TGG + chr1_4:31264171-31264190 Msa0159770:CDS 35.0%
ATCTCCATGTGTCAAAATCA+AGG - chr1_4:31264178-31264197 None:intergenic 35.0%
TAGACAACAACTTACAGCAA+AGG - chr1_4:31264205-31264224 None:intergenic 35.0%
!! GATGCAGAATCTTTGAGATA+TGG + chr1_4:31264544-31264563 Msa0159770:CDS 35.0%
! CTTTAAGTTACTCACCTGAT+TGG - chr1_4:31264587-31264606 None:intergenic 35.0%
! TGTGTGATTTAGGATGAAGA+TGG + chr1_4:31264712-31264731 Msa0159770:intron 35.0%
! GCTAACCTTTATAATGGGAA+AGG - chr1_4:31264824-31264843 None:intergenic 35.0%
CAGGCTTCTAATTCAAAGAA+GGG + chr1_4:31264947-31264966 Msa0159770:intron 35.0%
AGGCTTCTAATTCAAAGAAG+GGG + chr1_4:31264948-31264967 Msa0159770:intron 35.0%
!! TTGGGAGATAAAGTACTGTA+AGG + chr1_4:31265042-31265061 Msa0159770:CDS 35.0%
!! AGTACTGTAAGGTTTGTTGT+TGG + chr1_4:31265053-31265072 Msa0159770:intron 35.0%
!!! GTTTGTTTTACTTGCATCTG+TGG + chr1_4:31265154-31265173 Msa0159770:intron 35.0%
! ATGGTTTGCCTACACTATAT+TGG + chr1_4:31265332-31265351 Msa0159770:intron 35.0%
ATGCAGCATCATATAAGTCT+TGG + chr1_4:31265385-31265404 Msa0159770:intron 35.0%
GACACAAGAGATAGATTAGT+GGG - chr1_4:31265736-31265755 None:intergenic 35.0%
AGACACAAGAGATAGATTAG+TGG - chr1_4:31265737-31265756 None:intergenic 35.0%
CTCTCTCTCTCTCTATTAAA+TGG + chr1_4:31265777-31265796 Msa0159770:intron 35.0%
TTGCCTATAGAAAAGGTTGA+AGG + chr1_4:31265870-31265889 Msa0159770:intron 35.0%
TGCCTATAGAAAAGGTTGAA+GGG + chr1_4:31265871-31265890 Msa0159770:intron 35.0%
! TTCCCTTCAACCTTTTCTAT+AGG - chr1_4:31265876-31265895 None:intergenic 35.0%
AAAAGGTTGAAGGGAAATGT+CGG + chr1_4:31265880-31265899 Msa0159770:intron 35.0%
!!! AATGTCGGTTTTCATCCTTT+TGG + chr1_4:31265895-31265914 Msa0159770:intron 35.0%
! GGTTTTCATCCTTTTGGATT+TGG + chr1_4:31265901-31265920 Msa0159770:intron 35.0%
! TTTAGGGGAACACAGTATTT+TGG - chr1_4:31266039-31266058 None:intergenic 35.0%
! GATGATGATGATGAACAAGA+TGG + chr1_4:31266203-31266222 Msa0159770:CDS 35.0%
TCAGTAAAAAAGCTGAGGAA+TGG + chr1_4:31266252-31266271 Msa0159770:CDS 35.0%
TAAAAAAGCTGAGGAATGGA+AGG + chr1_4:31266256-31266275 Msa0159770:CDS 35.0%
TAACACAAGCTTACTCTTCT+AGG + chr1_4:31266328-31266347 Msa0159770:intron 35.0%
AACACAAGCTTACTCTTCTA+GGG + chr1_4:31266329-31266348 Msa0159770:intron 35.0%
CTTTCATAATTACAAGTGCC+AGG - chr1_4:31266396-31266415 None:intergenic 35.0%
GAACATTCTCATTGTCACTA+TGG + chr1_4:31266603-31266622 Msa0159770:CDS 35.0%
CTCATACCTTATGGTCAATT+TGG + chr1_4:31266696-31266715 Msa0159770:CDS 35.0%
! ATAACTTTTCGGAACTTGCA+TGG - chr1_4:31266835-31266854 None:intergenic 35.0%
GCTTCTTGAATACTTGAATG+AGG + chr1_4:31266907-31266926 Msa0159770:CDS 35.0%
CTTGAATACTTGAATGAGGA+TGG + chr1_4:31266911-31266930 Msa0159770:CDS 35.0%
GGAGAAACAAAATACCAGTT+TGG - chr1_4:31266950-31266969 None:intergenic 35.0%
GAATCAGTTCAACTTTGATG+GGG - chr1_4:31267027-31267046 None:intergenic 35.0%
GAATGTAAGACGTTTCTTGA+AGG + chr1_4:31267172-31267191 Msa0159770:CDS 35.0%
TTTCTTGAAGGAAGAGGAAA+TGG + chr1_4:31267184-31267203 Msa0159770:CDS 35.0%
!! AACCATTAAGAAAAGTGCCA+AGG + chr1_4:31267241-31267260 Msa0159770:CDS 35.0%
!! ACCATTAAGAAAAGTGCCAA+GGG + chr1_4:31267242-31267261 Msa0159770:CDS 35.0%
CTATACAGTCAATGGTTTAG+TGG + chr1_4:31267265-31267284 Msa0159770:CDS 35.0%
! TTTCTTTGTTGCAGGGTTTT+AGG + chr1_4:31267464-31267483 Msa0159770:intron 35.0%
GCAAATAGGGGTTTATGAAA+TGG + chr1_4:31267486-31267505 Msa0159770:CDS 35.0%
! CATGTATCTTTTTGATGCAG+AGG + chr1_4:31267618-31267637 Msa0159770:CDS 35.0%
! AGAAGGGTATACTTTGTTCT+GGG - chr1_4:31267666-31267685 None:intergenic 35.0%
! AAGAAGGGTATACTTTGTTC+TGG - chr1_4:31267667-31267686 None:intergenic 35.0%
TTGAAGAGTTCTGTAGACTT+CGG + chr1_4:31267768-31267787 Msa0159770:CDS 35.0%
! GAAGTATTATGCGAAGAGAA+AGG + chr1_4:31267793-31267812 Msa0159770:CDS 35.0%
TTCTTCTCTAGATATTCCTG+CGG - chr1_4:31267911-31267930 None:intergenic 35.0%
TGATTACAGTTCAAAAGAGC+AGG + chr1_4:31268081-31268100 Msa0159770:CDS 35.0%
! CTTTCATCGGTGAAATTTTC+AGG - chr1_4:31268169-31268188 None:intergenic 35.0%
AAAGAAGCTGAAGACTTTGA+AGG + chr1_4:31268225-31268244 Msa0159770:CDS 35.0%
! CGATCTCATGTTGTTTGAAA+AGG + chr1_4:31268276-31268295 Msa0159770:CDS 35.0%
AGTGAAACACGCAAGTAAAA+AGG - chr1_4:31268397-31268416 None:intergenic 35.0%
GGAACAAATCATATCAAGCA+TGG + chr1_4:31268448-31268467 Msa0159770:CDS 35.0%
ACCACGAAAGAATAATCAGA+AGG + chr1_4:31268517-31268536 Msa0159770:CDS 35.0%
ACCTTCTGATTATTCTTTCG+TGG - chr1_4:31268521-31268540 None:intergenic 35.0%
GAAGGAAAACATTGCAATAC+AGG - chr1_4:31268561-31268580 None:intergenic 35.0%
AAGCGTTAAACATGATTGGA+AGG - chr1_4:31268579-31268598 None:intergenic 35.0%
GTGTAAGCGTTAAACATGAT+TGG - chr1_4:31268583-31268602 None:intergenic 35.0%
TTTCATGTGCCTATATCATC+AGG + chr1_4:31268603-31268622 Msa0159770:intron 35.0%
TGATGACTTAGTTCAAGAGA+AGG + chr1_4:31268681-31268700 Msa0159770:CDS 35.0%
! TGGCTGAACATCTTTTCTTT+TGG - chr1_4:31268749-31268768 None:intergenic 35.0%
CTTTCTCACTTTCTTCCTAT+TGG - chr1_4:31268794-31268813 None:intergenic 35.0%
TCGCCATTTAACAAGAAAAG+TGG + chr1_4:31268823-31268842 Msa0159770:CDS 35.0%
! CAAGAAAAGTGGTTCTATAC+TGG + chr1_4:31268834-31268853 Msa0159770:CDS 35.0%
! AACAATGGGTTTACGAAGAC+GGG + chr1_4:31262560-31262579 Msa0159770:CDS 40.0%
! CGAAGATTTTGTAGAGACCA+GGG - chr1_4:31262615-31262634 None:intergenic 40.0%
! TCGAAGATTTTGTAGAGACC+AGG - chr1_4:31262616-31262635 None:intergenic 40.0%
TACAACGGTGCTCCATTAAT+AGG + chr1_4:31262736-31262755 Msa0159770:CDS 40.0%
!! GTTGAGTTTGCTGATGAACT+GGG + chr1_4:31262826-31262845 Msa0159770:CDS 40.0%
GGATGTTAAGTTTGAGCGAA+TGG + chr1_4:31263176-31263195 Msa0159770:CDS 40.0%
!! AGTTGATGAATACTCGACCA+CGG + chr1_4:31263212-31263231 Msa0159770:CDS 40.0%
CTTGGTTAAGTCAGGCTTAA+AGG - chr1_4:31263241-31263260 None:intergenic 40.0%
! TTTGATGAAAAAGCGTGTGC+TGG + chr1_4:31263296-31263315 Msa0159770:CDS 40.0%
TTAGTTCAACCGTAACACCA+AGG - chr1_4:31263335-31263354 None:intergenic 40.0%
TATAGCAACAAACCTTGGCA+GGG - chr1_4:31263439-31263458 None:intergenic 40.0%
TGCCAAACTAAGTGATAGCT+TGG + chr1_4:31263552-31263571 Msa0159770:CDS 40.0%
CTCCAAGCTATCACTTAGTT+TGG - chr1_4:31263557-31263576 None:intergenic 40.0%
ATTTGCCTGAGTCTAAGTGA+CGG + chr1_4:31263577-31263596 Msa0159770:CDS 40.0%
TCCATTGCTACAATTAAGGG+TGG + chr1_4:31263724-31263743 Msa0159770:CDS 40.0%
CCATTGCTACAATTAAGGGT+GGG + chr1_4:31263725-31263744 Msa0159770:CDS 40.0%
! TGTGGGTTTTTGTCAATGCT+CGG + chr1_4:31263854-31263873 Msa0159770:CDS 40.0%
TGGTTTGAGAATGAAAGGCA+GGG - chr1_4:31263888-31263907 None:intergenic 40.0%
! TTGGTTTGAGAATGAAAGGC+AGG - chr1_4:31263889-31263908 None:intergenic 40.0%
AACCACTAAACCAGCTAGAT+TGG + chr1_4:31263918-31263937 Msa0159770:CDS 40.0%
ACCACTAAACCAGCTAGATT+GGG + chr1_4:31263919-31263938 Msa0159770:CDS 40.0%
TTCAAACGTATCCGTATCTG+TGG - chr1_4:31264090-31264109 None:intergenic 40.0%
! ACGTTTGAAACAAACGCATG+TGG + chr1_4:31264101-31264120 Msa0159770:CDS 40.0%
!!! CTTTTTGGTTTGAAGATGGC+CGG + chr1_4:31264370-31264389 Msa0159770:intron 40.0%
!!! TTTTTGGTTTGAAGATGGCC+GGG + chr1_4:31264371-31264390 Msa0159770:intron 40.0%
TCAATGGAAACACACCATAG+AGG - chr1_4:31264420-31264439 None:intergenic 40.0%
!! TTGAGCAATTTGCTGGTCAA+TGG - chr1_4:31264436-31264455 None:intergenic 40.0%
CAGCAAATTGCTCAATGTGA+GGG + chr1_4:31264441-31264460 Msa0159770:CDS 40.0%
!! CAGAATCTTTGAGATATGGC+CGG + chr1_4:31264548-31264567 Msa0159770:CDS 40.0%
!! ATATGGCCGGTTGATGATTA+TGG + chr1_4:31264561-31264580 Msa0159770:CDS 40.0%
! GATTGGCCATAATCATCAAC+CGG - chr1_4:31264570-31264589 None:intergenic 40.0%
!! GTTGATGATTATGGCCAATC+AGG + chr1_4:31264570-31264589 Msa0159770:CDS 40.0%
GCAGGCTTCTAATTCAAAGA+AGG + chr1_4:31264946-31264965 Msa0159770:intron 40.0%
CTATGCAGCAATATGAAGAC+TGG + chr1_4:31264990-31265009 Msa0159770:CDS 40.0%
TGGGTAACACTGCAAATGAT+TGG + chr1_4:31265023-31265042 Msa0159770:CDS 40.0%
GGGTAACACTGCAAATGATT+GGG + chr1_4:31265024-31265043 Msa0159770:CDS 40.0%
TATCCCTTCTGATGAAGAAG+GGG - chr1_4:31265259-31265278 None:intergenic 40.0%
GTATCCCTTCTGATGAAGAA+GGG - chr1_4:31265260-31265279 None:intergenic 40.0%
AGTATCCCTTCTGATGAAGA+AGG - chr1_4:31265261-31265280 None:intergenic 40.0%
!! ATTCCATTTTGGTGTGGCAT+TGG + chr1_4:31265286-31265305 Msa0159770:intron 40.0%
CAAGCAAGCCAATATAGTGT+AGG - chr1_4:31265343-31265362 None:intergenic 40.0%
!! CACTATATTGGCTTGCTTGT+TGG + chr1_4:31265344-31265363 Msa0159770:intron 40.0%
! ACTCGCATTTTGTCAAACAC+AGG + chr1_4:31265811-31265830 Msa0159770:intron 40.0%
! TCATCCTTTTGGATTTGGCT+TGG + chr1_4:31265906-31265925 Msa0159770:intron 40.0%
!! CATCCTTTTGGATTTGGCTT+GGG + chr1_4:31265907-31265926 Msa0159770:intron 40.0%
TAACCCAAGCCAAATCCAAA+AGG - chr1_4:31265913-31265932 None:intergenic 40.0%
!!! TTTTGGATTTGGCTTGGGTT+AGG + chr1_4:31265912-31265931 Msa0159770:intron 40.0%
ATTTCCTATAGCTCATGGGT+GGG - chr1_4:31265956-31265975 None:intergenic 40.0%
TATTTCCTATAGCTCATGGG+TGG - chr1_4:31265957-31265976 None:intergenic 40.0%
ACCCATGAGCTATAGGAAAT+AGG + chr1_4:31265956-31265975 Msa0159770:intron 40.0%
GCCTATTTCCTATAGCTCAT+GGG - chr1_4:31265960-31265979 None:intergenic 40.0%
TTCAAGATCTTGATGAGCAC+AGG + chr1_4:31266165-31266184 Msa0159770:CDS 40.0%
TCAAGATCTTGATGAGCACA+GGG + chr1_4:31266166-31266185 Msa0159770:CDS 40.0%
! AGCACAGGGCATATTTTGTT+TGG + chr1_4:31266180-31266199 Msa0159770:CDS 40.0%
!! GCACAGGGCATATTTTGTTT+GGG + chr1_4:31266181-31266200 Msa0159770:CDS 40.0%
AACTTCCACTTCAATTGAGC+TGG + chr1_4:31266226-31266245 Msa0159770:CDS 40.0%
GGCATTCAGTAAAAAAGCTG+AGG + chr1_4:31266247-31266266 Msa0159770:CDS 40.0%
TCTTCCTTTGACCAAGTGTA+AGG - chr1_4:31266512-31266531 None:intergenic 40.0%
GACAATTATTGGAATGGCAC+AGG + chr1_4:31266644-31266663 Msa0159770:CDS 40.0%
GAAGCTTATCATCATCCACA+GGG - chr1_4:31266892-31266911 None:intergenic 40.0%
AGAAGCTTATCATCATCCAC+AGG - chr1_4:31266893-31266912 None:intergenic 40.0%
AATACTTGAATGAGGATGGG+AGG + chr1_4:31266915-31266934 Msa0159770:CDS 40.0%
ATGATTGGTATGTACCTGTG+TGG - chr1_4:31267065-31267084 None:intergenic 40.0%
! ATTCCTCTCGTGCTTGTTAA+TGG + chr1_4:31267083-31267102 Msa0159770:CDS 40.0%
AGAACTAAAACATGTCCCCA+TGG - chr1_4:31267117-31267136 None:intergenic 40.0%
AAGACGTTTCTTGAAGGAAG+AGG + chr1_4:31267178-31267197 Msa0159770:CDS 40.0%
! AAATGGTGCCAATGAAACCA+TGG + chr1_4:31267201-31267220 Msa0159770:CDS 40.0%
CAATGAAACCATGGTACAGA+GGG + chr1_4:31267210-31267229 Msa0159770:CDS 40.0%
AAGAGCTTCCTATTCGAAAG+TGG + chr1_4:31267318-31267337 Msa0159770:CDS 40.0%
TCTTGAGTCCACTTTCGAAT+AGG - chr1_4:31267329-31267348 None:intergenic 40.0%
!!! TTGCAGGGTTTTAGGCAAAT+AGG + chr1_4:31267472-31267491 Msa0159770:intron 40.0%
!!! TGCAGGGTTTTAGGCAAATA+GGG + chr1_4:31267473-31267492 Msa0159770:intron 40.0%
! GAAGGGTATACTTTGTTCTG+GGG - chr1_4:31267665-31267684 None:intergenic 40.0%
TCTTCTCTAGATATTCCTGC+GGG - chr1_4:31267910-31267929 None:intergenic 40.0%
AATTCAGCTCTTCGGTAGAT+CGG - chr1_4:31268004-31268023 None:intergenic 40.0%
CAGAAAACTGTAGCGACATT+GGG + chr1_4:31268115-31268134 Msa0159770:CDS 40.0%
!! TCATCGGTGAAATTTTCAGG+AGG - chr1_4:31268166-31268185 None:intergenic 40.0%
!! TCGTTTAACCACATTGACTC+TGG - chr1_4:31268259-31268278 None:intergenic 40.0%
CATCAGCTTCCTGATGATAT+AGG - chr1_4:31268615-31268634 None:intergenic 40.0%
GAAGAAAGTGAGAAAGACGA+GGG + chr1_4:31268798-31268817 Msa0159770:CDS 40.0%
! AAAAGTGGTTCTATACTGGG+CGG + chr1_4:31268838-31268857 Msa0159770:CDS 40.0%
ATGAGCGACAGTGATTATGA+TGG + chr1_4:31268958-31268977 Msa0159770:CDS 40.0%
! TCTGATGATGAGTATCTGAG+TGG + chr1_4:31268991-31269010 Msa0159770:CDS 40.0%
! TTTTATCAGCAGCGTGAACG+AGG - chr1_4:31262645-31262664 None:intergenic 45.0%
! TTCTACTCTCAACCGGTTCA+TGG - chr1_4:31262683-31262702 None:intergenic 45.0%
!! GGTTGAGTTTGCTGATGAAC+TGG + chr1_4:31262825-31262844 Msa0159770:CDS 45.0%
ACAAACCTTGGCAGGGAAAA+GGG - chr1_4:31263432-31263451 None:intergenic 45.0%
AACAAACCTTGGCAGGGAAA+AGG - chr1_4:31263433-31263452 None:intergenic 45.0%
GTATAGCAACAAACCTTGGC+AGG - chr1_4:31263440-31263459 None:intergenic 45.0%
TTGAGAACTCAATCTGCGTG+TGG + chr1_4:31263470-31263489 Msa0159770:intron 45.0%
TGAGAACTCAATCTGCGTGT+GGG + chr1_4:31263471-31263490 Msa0159770:intron 45.0%
TTTGCCTGAGTCTAAGTGAC+GGG + chr1_4:31263578-31263597 Msa0159770:CDS 45.0%
! AAGTGACGGGAAGTTTCAAC+AGG + chr1_4:31263591-31263610 Msa0159770:CDS 45.0%
TGGAGTTAACAAAGCTGACC+TGG - chr1_4:31263708-31263727 None:intergenic 45.0%
CCCACCCTTAATTGTAGCAA+TGG - chr1_4:31263728-31263747 None:intergenic 45.0%
! ACCCAATCTAGCTGGTTTAG+TGG - chr1_4:31263923-31263942 None:intergenic 45.0%
AAACCCTCCTACCACAGATA+CGG + chr1_4:31264076-31264095 Msa0159770:CDS 45.0%
TATCCGTATCTGTGGTAGGA+GGG - chr1_4:31264082-31264101 None:intergenic 45.0%
AACGTATCCGTATCTGTGGT+AGG - chr1_4:31264086-31264105 None:intergenic 45.0%
AAGGTACATTTGCCACGCTT+GGG - chr1_4:31264159-31264178 None:intergenic 45.0%
!!! TTTTGGTTTGAAGATGGCCG+GGG + chr1_4:31264372-31264391 Msa0159770:intron 45.0%
CCTCACATTGAGCAATTTGC+TGG - chr1_4:31264443-31264462 None:intergenic 45.0%
CCAGCAAATTGCTCAATGTG+AGG + chr1_4:31264440-31264459 Msa0159770:CDS 45.0%
CAGATTCTGATGACCGTTCT+TGG + chr1_4:31264496-31264515 Msa0159770:CDS 45.0%
GTTTCGCACTAGTCCAAGAA+CGG - chr1_4:31264512-31264531 None:intergenic 45.0%
GAAGATGGCGCTCACTTAAA+AGG + chr1_4:31264727-31264746 Msa0159770:CDS 45.0%
AATCAGCCCCCTGTATATAG+TGG - chr1_4:31265120-31265139 None:intergenic 45.0%
ACTATATACAGGGGGCTGAT+TGG + chr1_4:31265119-31265138 Msa0159770:intron 45.0%
TCTGTCAGTGTGTCTCAAAG+AGG + chr1_4:31265188-31265207 Msa0159770:intron 45.0%
TCAGTGTGTCTCAAAGAGGT+TGG + chr1_4:31265192-31265211 Msa0159770:intron 45.0%
!! TGAAGAAGGGGCTCTAAAAG+AGG - chr1_4:31265247-31265266 None:intergenic 45.0%
ACACCAATGCCACACCAAAA+TGG - chr1_4:31265292-31265311 None:intergenic 45.0%
GTGGGACTCGTTTCATTTAG+TGG - chr1_4:31265718-31265737 None:intergenic 45.0%
CGCCTATTTCCTATAGCTCA+TGG - chr1_4:31265961-31265980 None:intergenic 45.0%
GAATGCCAGCTCAATTGAAG+TGG - chr1_4:31266234-31266253 None:intergenic 45.0%
GGCTTGGATTTGTAACTCTC+AGG + chr1_4:31266277-31266296 Msa0159770:CDS 45.0%
CAGGCTGCATCATCTGATAA+TGG - chr1_4:31266377-31266396 None:intergenic 45.0%
CATTATCAGATGATGCAGCC+TGG + chr1_4:31266375-31266394 Msa0159770:intron 45.0%
TCCATTCCGTCTATGGTAGA+TGG + chr1_4:31266486-31266505 Msa0159770:CDS 45.0%
GTAAGGCCATCTACCATAGA+CGG - chr1_4:31266495-31266514 None:intergenic 45.0%
! ATGGTAGATGGCCTTACACT+TGG + chr1_4:31266498-31266517 Msa0159770:CDS 45.0%
! ATGGCCTTACACTTGGTCAA+AGG + chr1_4:31266505-31266524 Msa0159770:CDS 45.0%
! TGGAATGGCACAGGATTTTG+TGG + chr1_4:31266653-31266672 Msa0159770:CDS 45.0%
! GGAATGGCACAGGATTTTGT+GGG + chr1_4:31266654-31266673 Msa0159770:CDS 45.0%
CGAGTGCCAAATTGACCATA+AGG - chr1_4:31266705-31266724 None:intergenic 45.0%
ATGGATAAGTTGCTCGTTCC+AGG + chr1_4:31266799-31266818 Msa0159770:intron 45.0%
TGGATAAGTTGCTCGTTCCA+GGG + chr1_4:31266800-31266819 Msa0159770:intron 45.0%
TATCATCATCCACAGGGAAG+AGG - chr1_4:31266886-31266905 None:intergenic 45.0%
AATTCTGCTTGTCACCACAC+AGG + chr1_4:31267048-31267067 Msa0159770:intron 45.0%
ACAAGCACGAGAGGAATGAT+TGG - chr1_4:31267080-31267099 None:intergenic 45.0%
CAACCATTAACAAGCACGAG+AGG - chr1_4:31267089-31267108 None:intergenic 45.0%
TGTTAATGGTTGCCATGCCA+TGG + chr1_4:31267097-31267116 Msa0159770:CDS 45.0%
GTTAATGGTTGCCATGCCAT+GGG + chr1_4:31267098-31267117 Msa0159770:CDS 45.0%
TTAATGGTTGCCATGCCATG+GGG + chr1_4:31267099-31267118 Msa0159770:CDS 45.0%
TAAAACATGTCCCCATGGCA+TGG - chr1_4:31267112-31267131 None:intergenic 45.0%
CCTCTGTACCATGGTTTCAT+TGG - chr1_4:31267212-31267231 None:intergenic 45.0%
CCAATGAAACCATGGTACAG+AGG + chr1_4:31267209-31267228 Msa0159770:CDS 45.0%
! GCCCTTGGCACTTTTCTTAA+TGG - chr1_4:31267246-31267265 None:intergenic 45.0%
! ACCATTGACTGTATAGCCCT+TGG - chr1_4:31267261-31267280 None:intergenic 45.0%
!!! CCTGAGCAGTTTTTTTGGCA+AGG - chr1_4:31267364-31267383 None:intergenic 45.0%
CCTTGCCAAAAAAACTGCTC+AGG + chr1_4:31267361-31267380 Msa0159770:CDS 45.0%
!!! GCAGGGTTTTAGGCAAATAG+GGG + chr1_4:31267474-31267493 Msa0159770:intron 45.0%
TTGTGCTAATAGTGCACGAC+AGG - chr1_4:31267594-31267613 None:intergenic 45.0%
GCATGACGCATTCACAACAT+CGG - chr1_4:31267981-31268000 None:intergenic 45.0%
ATTCAGCTCTTCGGTAGATC+GGG - chr1_4:31268003-31268022 None:intergenic 45.0%
TCATTTGCACCTGCAACTTG+TGG - chr1_4:31268064-31268083 None:intergenic 45.0%
GCAGAAAACTGTAGCGACAT+TGG + chr1_4:31268114-31268133 Msa0159770:CDS 45.0%
!! GGTGAAATTTTCAGGAGGCA+AGG - chr1_4:31268161-31268180 None:intergenic 45.0%
CAGCTTCACAAGGCTTTCAT+CGG - chr1_4:31268182-31268201 None:intergenic 45.0%
! GGAAGCTGAACTTGGTGAAA+AGG + chr1_4:31268201-31268220 Msa0159770:CDS 45.0%
ATTCCTCACCAGAGTCAATG+TGG + chr1_4:31268248-31268267 Msa0159770:CDS 45.0%
!! TAACCACATTGACTCTGGTG+AGG - chr1_4:31268254-31268273 None:intergenic 45.0%
TTGTAGGCCCCTTCTTATCT+GGG - chr1_4:31268711-31268730 None:intergenic 45.0%
TTTGTAGGCCCCTTCTTATC+TGG - chr1_4:31268712-31268731 None:intergenic 45.0%
AGATAAGAAGGGGCCTACAA+AGG + chr1_4:31268711-31268730 Msa0159770:CDS 45.0%
GATAAACCTGCACTTTCAGC+TGG - chr1_4:31268769-31268788 None:intergenic 45.0%
GTGCAGGTTTATCACCCAAT+AGG + chr1_4:31268776-31268795 Msa0159770:CDS 45.0%
GGAAGAAAGTGAGAAAGACG+AGG + chr1_4:31268797-31268816 Msa0159770:CDS 45.0%
! AAAGTGGTTCTATACTGGGC+GGG + chr1_4:31268839-31268858 Msa0159770:CDS 45.0%
TACTAGCTATCCTACTGCAG+TGG + chr1_4:31268909-31268928 Msa0159770:CDS 45.0%
!! TATTATTAATTATTTCAATA+AGG - chr1_4:31265627-31265646 None:intergenic 5.0%
! CAGGGACGTACGAGATTTTG+CGG - chr1_4:31262597-31262616 None:intergenic 50.0%
! ACTCTCAACCGGTTCATGGT+TGG - chr1_4:31262679-31262698 None:intergenic 50.0%
TGAACTGGGAACTACGAGAG+AGG + chr1_4:31262840-31262859 Msa0159770:CDS 50.0%
! GAAAAAGCGTGTGCTGGACA+TGG + chr1_4:31263302-31263321 Msa0159770:CDS 50.0%
AACTCAATCTGCGTGTGGGT+TGG + chr1_4:31263475-31263494 Msa0159770:intron 50.0%
ACTTCCCGTCACTTAGACTC+AGG - chr1_4:31263585-31263604 None:intergenic 50.0%
GTATCCGTATCTGTGGTAGG+AGG - chr1_4:31264083-31264102 None:intergenic 50.0%
AACGCATGTGGAAACGCATG+TGG + chr1_4:31264113-31264132 Msa0159770:CDS 50.0%
AACGCATGTGGAAGCCATGT+TGG + chr1_4:31264125-31264144 Msa0159770:CDS 50.0%
CAAGGTACATTTGCCACGCT+TGG - chr1_4:31264160-31264179 None:intergenic 50.0%
GCACAAGCGGTTGAAGCTTA+TGG + chr1_4:31264295-31264314 Msa0159770:intron 50.0%
GGAAACACACCATAGAGGTC+TGG - chr1_4:31264415-31264434 None:intergenic 50.0%
AGAGCCCCTTCTTCATCAGA+AGG + chr1_4:31265252-31265271 Msa0159770:intron 50.0%
GAGCCCCTTCTTCATCAGAA+GGG + chr1_4:31265253-31265272 Msa0159770:intron 50.0%
!! ATTTGGCTTGGGTTAGGCCA+TGG + chr1_4:31265918-31265937 Msa0159770:intron 50.0%
AAGCTGAGGAATGGAAGGCT+TGG + chr1_4:31266261-31266280 Msa0159770:CDS 50.0%
CCATAGACGGAATGGACCTT+TGG - chr1_4:31266482-31266501 None:intergenic 50.0%
CCAAAGGTCCATTCCGTCTA+TGG + chr1_4:31266479-31266498 Msa0159770:CDS 50.0%
GCCATCTACCATAGACGGAA+TGG - chr1_4:31266490-31266509 None:intergenic 50.0%
TCAATTTGGCACTCGTGACC+TGG + chr1_4:31266710-31266729 Msa0159770:CDS 50.0%
!! TTATGCCGGTTCATCTCACC+AGG - chr1_4:31266731-31266750 None:intergenic 50.0%
ATAAGTTGCTCGTTCCAGGG+TGG + chr1_4:31266803-31266822 Msa0159770:intron 50.0%
TTGCATGGTCTTTACCACCC+TGG - chr1_4:31266820-31266839 None:intergenic 50.0%
GGAGGTCCATTGAACCAAAC+TGG + chr1_4:31266933-31266952 Msa0159770:CDS 50.0%
GCCAAGGGCTATACAGTCAA+TGG + chr1_4:31267257-31267276 Msa0159770:CDS 50.0%
!!! GTGCGCCTGAGCAGTTTTTT+TGG - chr1_4:31267369-31267388 None:intergenic 50.0%
TCTGCAGAACCACAAGTTGC+AGG + chr1_4:31268052-31268071 Msa0159770:CDS 50.0%
! CGATGAAAGCCTTGTGAAGC+TGG + chr1_4:31268180-31268199 Msa0159770:CDS 50.0%
GTTCAGCTTCCAGCTTCACA+AGG - chr1_4:31268192-31268211 None:intergenic 50.0%
GTGAAGCTGGAAGCTGAACT+TGG + chr1_4:31268193-31268212 Msa0159770:CDS 50.0%
AAGGCTGCCCCAGATAAGAA+GGG + chr1_4:31268700-31268719 Msa0159770:CDS 50.0%
TGTAGGCCCCTTCTTATCTG+GGG - chr1_4:31268710-31268729 None:intergenic 50.0%
GAAGTGGTAGCTGCCTTTGT+AGG - chr1_4:31268727-31268746 None:intergenic 50.0%
! AAGTGGTTCTATACTGGGCG+GGG + chr1_4:31268840-31268859 Msa0159770:CDS 50.0%
GGACGAGGTGGTTGAGAAAT+TGG + chr1_4:31268930-31268949 Msa0159770:CDS 50.0%
TTCCCACCGTTTCTCCATGG+CGG - chr1_4:31262374-31262393 None:intergenic 55.0%
!! TTTCTCCATGGTGGTGGTGG+TGG - chr1_4:31262491-31262510 None:intergenic 55.0%
CCACCACCACCATGGAGAAA+CGG + chr1_4:31262491-31262510 Msa0159770:CDS 55.0%
TTCGCACCGTTTCTCCATGG+TGG - chr1_4:31262500-31262519 None:intergenic 55.0%
CGCAAAATCTCGTACGTCCC+TGG + chr1_4:31262595-31262614 Msa0159770:CDS 55.0%
GGCGAGATCCAACCATGAAC+CGG + chr1_4:31262668-31262687 Msa0159770:CDS 55.0%
ACTGGGAACTACGAGAGAGG+TGG + chr1_4:31262843-31262862 Msa0159770:intron 55.0%
GTCAGGCTTAAAGGTCACCG+TGG - chr1_4:31263232-31263251 None:intergenic 55.0%
CCTTGGCAGGGAAAAGGGTT+TGG - chr1_4:31263427-31263446 None:intergenic 55.0%
! CCAAACCCTTTTCCCTGCCA+AGG + chr1_4:31263424-31263443 Msa0159770:CDS 55.0%
CATGTGGAAGCCATGTTGGC+TGG + chr1_4:31264129-31264148 Msa0159770:CDS 55.0%
!! GTGGTGGATCCAGACCTCTA+TGG + chr1_4:31264403-31264422 Msa0159770:CDS 55.0%
!! GAAGGGGCTCTAAAAGAGGC+TGG - chr1_4:31265243-31265262 None:intergenic 55.0%
CGTGACCTGGTGAGATGAAC+CGG + chr1_4:31266723-31266742 Msa0159770:intron 55.0%
TACTCGTCTCCTCTTCCCTG+TGG + chr1_4:31266874-31266893 Msa0159770:CDS 55.0%
CCTCTGAACCCTCTGTACCA+TGG - chr1_4:31267221-31267240 None:intergenic 55.0%
CCATGGTACAGAGGGTTCAG+AGG + chr1_4:31267218-31267237 Msa0159770:CDS 55.0%
AACTGCTCAGGCGCACATTG+AGG + chr1_4:31267373-31267392 Msa0159770:CDS 55.0%
GAAGGCTGCCCCAGATAAGA+AGG + chr1_4:31268699-31268718 Msa0159770:CDS 55.0%
AGGCTGCCCCAGATAAGAAG+GGG + chr1_4:31268701-31268720 Msa0159770:CDS 55.0%
! GTTCAGCCAGCTGAAAGTGC+AGG + chr1_4:31268760-31268779 Msa0159770:CDS 55.0%
CTATCCTACTGCAGTGGACG+AGG + chr1_4:31268915-31268934 Msa0159770:CDS 55.0%
TCTCTCTACCACCACCGCCA+TGG + chr1_4:31262357-31262376 Msa0159770:exon 60.0%
CCACCACCGCCATGGAGAAA+CGG + chr1_4:31262365-31262384 Msa0159770:exon 60.0%
CACCGCCATGGAGAAACGGT+GGG + chr1_4:31262369-31262388 Msa0159770:exon 60.0%
GGGTTCCCACCGTTTCTCCA+TGG - chr1_4:31262377-31262396 None:intergenic 60.0%
!! CCGTTTCTCCATGGTGGTGG+TGG - chr1_4:31262494-31262513 None:intergenic 60.0%
GCACCGTTTCTCCATGGTGG+TGG - chr1_4:31262497-31262516 None:intergenic 60.0%
CGGTTCGCACCGTTTCTCCA+TGG - chr1_4:31262503-31262522 None:intergenic 60.0%
AAGCGTGTGCTGGACATGGC+AGG + chr1_4:31263306-31263325 Msa0159770:CDS 60.0%
AGCGTGTGCTGGACATGGCA+GGG + chr1_4:31263307-31263326 Msa0159770:CDS 60.0%
!! GGCAGGGTGCCTTGGTGTTA+CGG + chr1_4:31263323-31263342 Msa0159770:CDS 60.0%
! GTGGAAGCCATGTTGGCTGG+CGG + chr1_4:31264132-31264151 Msa0159770:CDS 60.0%
ATCCACCACAGCAGAGTCCC+CGG - chr1_4:31264392-31264411 None:intergenic 60.0%
CCTATAGCTCATGGGTGGGC+AGG - chr1_4:31265952-31265971 None:intergenic 60.0%
CCTGCCCACCCATGAGCTAT+AGG + chr1_4:31265949-31265968 Msa0159770:intron 60.0%
TGCAAGTTGTGCTTGCCCGC+AGG + chr1_4:31267892-31267911 Msa0159770:intron 60.0%
GGTTCTATACTGGGCGGGGA+TGG + chr1_4:31268844-31268863 Msa0159770:CDS 60.0%
ACTGGGCGGGGATGGTAACT+TGG + chr1_4:31268852-31268871 Msa0159770:CDS 60.0%
TCCTACTGCAGTGGACGAGG+TGG + chr1_4:31268918-31268937 Msa0159770:CDS 60.0%
ACCACCTCGTCCACTGCAGT+AGG - chr1_4:31268922-31268941 None:intergenic 60.0%
CCGTTTCTCCATGGCGGTGG+TGG - chr1_4:31262368-31262387 None:intergenic 65.0%
CCACCGTTTCTCCATGGCGG+TGG - chr1_4:31262371-31262390 None:intergenic 65.0%
CCACCGCCATGGAGAAACGG+TGG + chr1_4:31262368-31262387 Msa0159770:exon 65.0%
CACCACCACCACCACCACCA+TGG + chr1_4:31262483-31262502 Msa0159770:CDS 65.0%
!! CTCCATGGTGGTGGTGGTGG+TGG - chr1_4:31262488-31262507 None:intergenic 65.0%
! CTGGACATGGCAGGGTGCCT+TGG + chr1_4:31263315-31263334 Msa0159770:CDS 65.0%
CTTGGGTCCGCCAGCCAACA+TGG - chr1_4:31264142-31264161 None:intergenic 65.0%
GTGGGCAGGTTGTGCAGCCA+TGG - chr1_4:31265938-31265957 None:intergenic 65.0%
ACAGGGCTTGACTGCTGCGC+AGG + chr1_4:31266127-31266146 Msa0159770:intron 65.0%
! TTGGCTGGCGGACCCAAGCG+TGG + chr1_4:31264144-31264163 Msa0159770:CDS 70.0%
GATGGCCGGGGACTCTGCTG+TGG + chr1_4:31264384-31264403 Msa0159770:intron 70.0%
GGCCGGGGACTCTGCTGTGG+TGG + chr1_4:31264387-31264406 Msa0159770:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 31262355 31269270 31262355 ID=Msa0159770;Name=Msa0159770
chr1_4 mRNA 31262355 31269270 31262355 ID=Msa0159770-mRNA-1;Parent=Msa0159770;Name=Msa0159770-mRNA-1;_AED=0.10;_eAED=0.11;_QI=21|0.88|0.94|1|1|1|18|244|1306
chr1_4 exon 31262355 31262861 31262355 ID=Msa0159770-mRNA-1:exon:9864;Parent=Msa0159770-mRNA-1
chr1_4 exon 31262974 31263075 31262974 ID=Msa0159770-mRNA-1:exon:9865;Parent=Msa0159770-mRNA-1
chr1_4 exon 31263159 31263445 31263159 ID=Msa0159770-mRNA-1:exon:9866;Parent=Msa0159770-mRNA-1
chr1_4 exon 31263546 31263612 31263546 ID=Msa0159770-mRNA-1:exon:9867;Parent=Msa0159770-mRNA-1
chr1_4 exon 31263709 31263964 31263709 ID=Msa0159770-mRNA-1:exon:9868;Parent=Msa0159770-mRNA-1
chr1_4 exon 31264055 31264209 31264055 ID=Msa0159770-mRNA-1:exon:9869;Parent=Msa0159770-mRNA-1
chr1_4 exon 31264385 31264591 31264385 ID=Msa0159770-mRNA-1:exon:9870;Parent=Msa0159770-mRNA-1
chr1_4 exon 31264724 31264837 31264724 ID=Msa0159770-mRNA-1:exon:9871;Parent=Msa0159770-mRNA-1
chr1_4 exon 31264950 31265063 31264950 ID=Msa0159770-mRNA-1:exon:9872;Parent=Msa0159770-mRNA-1
chr1_4 exon 31266131 31266298 31266131 ID=Msa0159770-mRNA-1:exon:9873;Parent=Msa0159770-mRNA-1
chr1_4 exon 31266384 31266731 31266384 ID=Msa0159770-mRNA-1:exon:9874;Parent=Msa0159770-mRNA-1
chr1_4 exon 31266821 31266954 31266821 ID=Msa0159770-mRNA-1:exon:9875;Parent=Msa0159770-mRNA-1
chr1_4 exon 31267070 31267394 31267070 ID=Msa0159770-mRNA-1:exon:9876;Parent=Msa0159770-mRNA-1
chr1_4 exon 31267478 31267673 31267478 ID=Msa0159770-mRNA-1:exon:9877;Parent=Msa0159770-mRNA-1
chr1_4 exon 31267765 31267814 31267765 ID=Msa0159770-mRNA-1:exon:9878;Parent=Msa0159770-mRNA-1
chr1_4 exon 31267914 31268306 31267914 ID=Msa0159770-mRNA-1:exon:9879;Parent=Msa0159770-mRNA-1
chr1_4 exon 31268422 31268538 31268422 ID=Msa0159770-mRNA-1:exon:9880;Parent=Msa0159770-mRNA-1
chr1_4 exon 31268625 31269270 31268625 ID=Msa0159770-mRNA-1:exon:9881;Parent=Msa0159770-mRNA-1
chr1_4 five_prime_UTR 31262355 31262375 31262355 ID=Msa0159770-mRNA-1:five_prime_utr;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31262376 31262861 31262376 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31262974 31263075 31262974 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31263159 31263445 31263159 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31263546 31263612 31263546 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31263709 31263964 31263709 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31264055 31264209 31264055 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31264385 31264591 31264385 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31264724 31264837 31264724 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31264950 31265063 31264950 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31266131 31266298 31266131 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31266384 31266731 31266384 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31266821 31266954 31266821 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31267070 31267394 31267070 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31267478 31267673 31267478 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31267765 31267814 31267765 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31267914 31268306 31267914 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31268422 31268538 31268422 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 CDS 31268625 31269026 31268625 ID=Msa0159770-mRNA-1:cds;Parent=Msa0159770-mRNA-1
chr1_4 three_prime_UTR 31269027 31269270 31269027 ID=Msa0159770-mRNA-1:three_prime_utr;Parent=Msa0159770-mRNA-1
Gene Sequence

>Msa0159770

ATGGAGAAACGGTGGGAACCCGATACTTTCATAACACGATACTTTCATCGACTCAATAAAAAAAATTCAATAAAAGAAAAAACACAGAAACAATGGGTCTACGACGACACCACCACCACCACCACCATGGAGAAACGGTGCGAACCGTATACTTTCATCGATTCAATAAAAAAAAAAACACAGAAACAATGGGTTTACGAAGACGGGAAAATAGTTCACCGCAAAATCTCGTACGTCCCTGGTCTCTACAAAATCTTCGACATAATCCTCGTTCACGCTGCTGATAAAAAACGGCGAGATCCAACCATGAACCGGTTGAGAGTAGAAATTGATACTAAGATGAATGAGATTTCTGTTTGCTACAACGGTGCTCCATTAATAGGCGATGAAACATTTGATGATGTAATAAACATTTTTCATCTCACGAATAGTTACTCGACTTGTTTTTGGGTTGAGTTTGCTGATGAACTGGGAACTACGAGAGAGAATCATGTTACAGTTTTACATCTTGTAGGAAATGGACCTGTATTTTATATTTCTGCTATCATCTCGTTGCAGTATTTGTTTGAACTTTGGTCTTTGATTTTGGAGTTCCGTAATAATATGGATGTTAAGTTTGAGCGAATGGTAACCAAACGCAAAGTTGATGAATACTCGACCACGGTGACCTTTAAGCCTGACTTAACCAAGTTTGAAATGACCTGTCTTGAAAAGGATGTTGTAGCTTTGATGAAAAAGCGTGTGCTGGACATGGCAGGGTGCCTTGGTGTTACGGTTGAACTAAACAGCGAAGTGATTCCATTCAAGTCTTTCAAAGGTTATGCTGATTTCTTCTTGAATTGTGCTCAGGAGTCCAAACCCTTTTCCCTGCCAAGGACTCATGCCAAACTAAGTGATAGCTTGGAGATTTGCCTGAGTCTAAGTGACGGGAAGTTTCAACAGGTCAGCTTTGTTAACTCCATTGCTACAATTAAGGGTGGGACTCATGTTGATTACATCACCAAGCAAATTACTACCTATATAAAGAAGGAAGTATTGAAGAAGAAGGAGCATGTCAATGTGAATGCTGACACTGTGAAGAATCATTTGTGGGTTTTTGTCAATGCTCGGATTGACAACCCTGCCTTTCATTCTCAAACCAAAGAGATGTTAACCACTAAACCAGCTAGATTGGGTTTAAATTCAAGGCTGACTCATGATCAAAAGTCTGAAATTGCGAAAACCCTCCTACCACAGATACGGATACGTTTGAAACAAACGCATGTGGAAACGCATGTGGAAGCCATGTTGGCTGGCGGACCCAAGCGTGGCAAATGTACCTTGATTTTGACACATGGAGATTCTGCCTTTGCTATGGCCGGGGACTCTGCTGTGGTGGATCCAGACCTCTATGGTGTGTTTCCATTGACCAGCAAATTGCTCAATGTGAGGGACAGTAGAAAGCTATTAAAAAAGAAAGAAATTCAGATTCTGATGACCGTTCTTGGACTAGTGCGAAACAAGAAATACAGTGATGCAGAATCTTTGAGATATGGCCGGTTGATGATTATGGCCAATCAGGATGAAGATGGCGCTCACTTAAAAGGACTATTGATAAACTTCATTTATTCATTCTGGCCATCACTACTTAAAGTTTCAAAATTCATGTCTGTGTTTACCTTTCCCATTATAAAGGCTTCTAATTCAAAGAAGGGGAAGAAGTTATCATTTGATTCTATGCAGCAATATGAAGACTGGAAAAAAGAATTGGGTAACACTGCAAATGATTGGGAGATAAAGTACTGTAAGGGCTTGACTGCTGCGCAGGAAGTGAGAGAGTACTTTCAAGATCTTGATGAGCACAGGGCATATTTTGTTTGGGATGATGATGATGAACAAGATGGAACTTCCACTTCAATTGAGCTGGCATTCAGTAAAAAAGCTGAGGAATGGAAGGCTTGGATTTGTAACTCTCAGATGATGCAGCCTGGCACTTGTAATTATGAAAGAAAAAGTATAAAGTACAGGGATTTTGTTAACAAAGAACTTCTATTCTTCTCAATGAAAAATCTCCAAAGGTCCATTCCGTCTATGGTAGATGGCCTTACACTTGGTCAAAGGAAGACTCTTTTCTGCTCCTTTAAGATGAATTTGACCAAACAAACAGAAGTTTCCTTATTAACTGCTTATGTGACTGAACATTCTCATTGTCACTATGGTGAACAAAGTATTACTAGGACAATTATTGGAATGGCACAGGATTTTGTGGGTAGCAACAACATCAATCTTCTCATACCTTATGGTCAATTTGGCACTCGTGACCTGGGTGGTAAAGACCATGCAAGTTCCGAAAAGTTATACATTAAGCTAAATTGCGTTACTCGTCTCCTCTTCCCTGTGGATGATGATAAGCTTCTTGAATACTTGAATGAGGATGGGAGGTCCATTGAACCAAACTGGTACATACCAATCATTCCTCTCGTGCTTGTTAATGGTTGCCATGCCATGGGGACATGTTTTAGTTCTGATATTCCCAAATATCATCCATGTGAAATTATTGAGAATGTAAGACGTTTCTTGAAGGAAGAGGAAATGGTGCCAATGAAACCATGGTACAGAGGGTTCAGAGGAACCATTAAGAAAAGTGCCAAGGGCTATACAGTCAATGGTTTAGTGGAGAGAATAAATGAACAAACTGTCAGAATCGAAGAGCTTCCTATTCGAAAGTGGACTCAAGATTATAAGAAGTTCCTTGCCAAAAAAACTGCTCAGGCGCACATTGAGGGTTTTAGGCAAATAGGGGTTTATGAAATGGTAGACTTTAAAGTCAAGATGAAGCCAGAAAAAATAGCTACAACAGAGGACGAAGATAAAGAAGAATTATGCAGGAAGTTTAACCTGTCGTGCACTATTAGCACAAGCAACATGTATCTTTTTGATGCAGAGGGAAAAATTATGAAATATAACTCCCCAGAACAAATTCTTGAAGAGTTCTGTAGACTTCGGCTGAAGTATTATGCGAAGAGAAAGGAATATCTAGAGAAGAACATTAAACAACTTTTGCCGAGTTTAAGAATCAAACGAAATTTTATAACCGATGTTGTGAATGCGTCATGCCCGATCTACCGAAGAGCTGAATTTTTGATTGAGATTCTGAAGAAAGGTAACTCTGCAGAACCACAAGTTGCAGGTGCAAATGATTACAGTTCAAAAGAGCAGGAAGCTGATGAGCAGAAAACTGTAGCGACATTGGGTGACTATGAGTATCTTTCATCCTTGCCTCCTGAAAATTTCACCGATGAAAGCCTTGTGAAGCTGGAAGCTGAACTTGGTGAAAAGGAAAAGAAGCTGAAGACTTTGAAGGATTCCTCACCAGAGTCAATGTGGTTAAACGATCTCATGTTGTTTGAAAAGGAATTTGAGAAACTACAGAAAATTCAGACAGAAAAGGAACAAATCATATCAAGCATGGTGAAGAAAAAGAATGATTTTGCAATTGATGCAAAAAAGCTGTCACAACCACGAAAGAATAATCAGAAGGAAGCTGATGATGATATTCCATCAGATAGTGATAATGAAGTCAATGCTGTTGATGCTGATGACTTAGTTCAAGAGAAGGCTGCCCCAGATAAGAAGGGGCCTACAAAGGCAGCTACCACTTCCAAAAGAAAAGATGTTCAGCCAGCTGAAAGTGCAGGTTTATCACCCAATAGGAAGAAAGTGAGAAAGACGAGGGAGTCGCCATTTAACAAGAAAAGTGGTTCTATACTGGGCGGGGATGGTAACTTGGATTTAAGTTTAAATACAGATTTGTTCGATGACTCTACTAGCTATCCTACTGCAGTGGACGAGGTGGTTGAGAAATTGGAGTCTATGAGCGACAGTGATTATGATGGCGACAATGATTCTGATGATGAGTATCTGAGTGGTTTTATGCATTAG
Protein sequence

>Msa0159770

MEKRWEPDTFITRYFHRLNKKNSIKEKTQKQWVYDDTTTTTTMEKRCEPYTFIDSIKKKTQKQWVYEDGKIVHRKISYVPGLYKIFDIILVHAADKKRRDPTMNRLRVEIDTKMNEISVCYNGAPLIGDETFDDVINIFHLTNSYSTCFWVEFADELGTTRENHVTVLHLVGNGPVFYISAIISLQYLFELWSLILEFRNNMDVKFERMVTKRKVDEYSTTVTFKPDLTKFEMTCLEKDVVALMKKRVLDMAGCLGVTVELNSEVIPFKSFKGYADFFLNCAQESKPFSLPRTHAKLSDSLEICLSLSDGKFQQVSFVNSIATIKGGTHVDYITKQITTYIKKEVLKKKEHVNVNADTVKNHLWVFVNARIDNPAFHSQTKEMLTTKPARLGLNSRLTHDQKSEIAKTLLPQIRIRLKQTHVETHVEAMLAGGPKRGKCTLILTHGDSAFAMAGDSAVVDPDLYGVFPLTSKLLNVRDSRKLLKKKEIQILMTVLGLVRNKKYSDAESLRYGRLMIMANQDEDGAHLKGLLINFIYSFWPSLLKVSKFMSVFTFPIIKASNSKKGKKLSFDSMQQYEDWKKELGNTANDWEIKYCKGLTAAQEVREYFQDLDEHRAYFVWDDDDEQDGTSTSIELAFSKKAEEWKAWICNSQMMQPGTCNYERKSIKYRDFVNKELLFFSMKNLQRSIPSMVDGLTLGQRKTLFCSFKMNLTKQTEVSLLTAYVTEHSHCHYGEQSITRTIIGMAQDFVGSNNINLLIPYGQFGTRDLGGKDHASSEKLYIKLNCVTRLLFPVDDDKLLEYLNEDGRSIEPNWYIPIIPLVLVNGCHAMGTCFSSDIPKYHPCEIIENVRRFLKEEEMVPMKPWYRGFRGTIKKSAKGYTVNGLVERINEQTVRIEELPIRKWTQDYKKFLAKKTAQAHIEGFRQIGVYEMVDFKVKMKPEKIATTEDEDKEELCRKFNLSCTISTSNMYLFDAEGKIMKYNSPEQILEEFCRLRLKYYAKRKEYLEKNIKQLLPSLRIKRNFITDVVNASCPIYRRAEFLIEILKKGNSAEPQVAGANDYSSKEQEADEQKTVATLGDYEYLSSLPPENFTDESLVKLEAELGEKEKKLKTLKDSSPESMWLNDLMLFEKEFEKLQKIQTEKEQIISSMVKKKNDFAIDAKKLSQPRKNNQKEADDDIPSDSDNEVNAVDADDLVQEKAAPDKKGPTKAATTSKRKDVQPAESAGLSPNRKKVRKTRESPFNKKSGSILGGDGNLDLSLNTDLFDDSTSYPTAVDEVVEKLESMSDSDYDGDNDSDDEYLSGFMH*