Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526940 | XP_003626086.1 | 96.897 | 290 | 7 | 2 | 1 | 289 | 1 | 289 | 0.0 | 574 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526940 | G7KVG1 | 96.897 | 290 | 7 | 2 | 1 | 289 | 1 | 289 | 0.0 | 574 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa0526940 | -0.803977 | 2.694140e-49 | -8.615850e-47 |
| Msa0005000 | Msa0526940 | -0.838845 | 2.257264e-57 | -8.615850e-47 |
| Msa0008290 | Msa0526940 | 0.807133 | 5.865913e-50 | -8.615850e-47 |
| Msa0022550 | Msa0526940 | 0.800676 | 1.288796e-48 | -8.615850e-47 |
| Msa0022750 | Msa0526940 | -0.832578 | 8.728865e-56 | -8.615850e-47 |
| Msa0027390 | Msa0526940 | 0.805746 | 1.150558e-49 | -8.615850e-47 |
| Msa0029850 | Msa0526940 | 0.813590 | 2.369985e-51 | -8.615850e-47 |
| Msa0029880 | Msa0526940 | 0.816274 | 6.016376e-52 | -8.615850e-47 |
| Msa0029890 | Msa0526940 | 0.808498 | 3.007111e-50 | -8.615850e-47 |
| Msa0032320 | Msa0526940 | 0.823403 | 1.411371e-53 | -8.615850e-47 |
| Msa0048000 | Msa0526940 | 0.837819 | 4.151377e-57 | -8.615850e-47 |
| Msa0050730 | Msa0526940 | 0.836657 | 8.229565e-57 | -8.615850e-47 |
| Msa0050760 | Msa0526940 | 0.833522 | 5.080355e-56 | -8.615850e-47 |
| Msa0053050 | Msa0526940 | -0.851424 | 8.955168e-61 | -8.615850e-47 |
| Msa0098390 | Msa0526940 | -0.836792 | 7.602586e-57 | -8.615850e-47 |
| Msa0101880 | Msa0526940 | 0.811340 | 7.350875e-51 | -8.615850e-47 |
| Msa0102750 | Msa0526940 | 0.801251 | 9.831623e-49 | -8.615850e-47 |
| Msa0105420 | Msa0526940 | 0.804936 | 1.700592e-49 | -8.615850e-47 |
| Msa0115090 | Msa0526940 | 0.818935 | 1.511585e-52 | -8.615850e-47 |
| Msa0124550 | Msa0526940 | 0.800653 | 1.302747e-48 | -8.615850e-47 |
| Msa0125050 | Msa0526940 | 0.806237 | 9.070739e-50 | -8.615850e-47 |
| Msa0125090 | Msa0526940 | 0.803809 | 2.920126e-49 | -8.615850e-47 |
| Msa0128650 | Msa0526940 | 0.813610 | 2.345911e-51 | -8.615850e-47 |
| Msa0130240 | Msa0526940 | 0.805624 | 1.220090e-49 | -8.615850e-47 |
| Msa0144790 | Msa0526940 | 0.810179 | 1.310824e-50 | -8.615850e-47 |
| Msa0165300 | Msa0526940 | 0.803895 | 2.801791e-49 | -8.615850e-47 |
| Msa0168430 | Msa0526940 | 0.819183 | 1.327360e-52 | -8.615850e-47 |
| Msa0169820 | Msa0526940 | 0.813968 | 1.956669e-51 | -8.615850e-47 |
| Msa0169860 | Msa0526940 | 0.846804 | 1.725058e-59 | -8.615850e-47 |
| Msa0170140 | Msa0526940 | 0.800822 | 1.203426e-48 | -8.615850e-47 |
| Msa0174690 | Msa0526940 | 0.811068 | 8.420648e-51 | -8.615850e-47 |
| Msa0205850 | Msa0526940 | 0.800934 | 1.141629e-48 | -8.615850e-47 |
| Msa0210250 | Msa0526940 | 0.810208 | 1.292108e-50 | -8.615850e-47 |
| Msa0227230 | Msa0526940 | 0.809415 | 1.914181e-50 | -8.615850e-47 |
| Msa0227510 | Msa0526940 | 0.821322 | 4.293216e-53 | -8.615850e-47 |
| Msa0236700 | Msa0526940 | -0.808511 | 2.987212e-50 | -8.615850e-47 |
| Msa0377440 | Msa0526940 | 0.802365 | 5.807973e-49 | -8.615850e-47 |
| Msa0388960 | Msa0526940 | 0.813511 | 2.467172e-51 | -8.615850e-47 |
| Msa0390960 | Msa0526940 | 0.808790 | 2.604956e-50 | -8.615850e-47 |
| Msa0410300 | Msa0526940 | 0.821079 | 4.884547e-53 | -8.615850e-47 |
| Msa0432480 | Msa0526940 | 0.832905 | 7.238587e-56 | -8.615850e-47 |
| Msa0436370 | Msa0526940 | 0.808947 | 2.410587e-50 | -8.615850e-47 |
| Msa0439970 | Msa0526940 | 0.802277 | 6.055912e-49 | -8.615850e-47 |
| Msa0449830 | Msa0526940 | 0.801080 | 1.065965e-48 | -8.615850e-47 |
| Msa0451360 | Msa0526940 | 0.809286 | 2.039587e-50 | -8.615850e-47 |
| Msa0452920 | Msa0526940 | 0.806749 | 7.073550e-50 | -8.615850e-47 |
| Msa0458440 | Msa0526940 | 0.809387 | 1.940225e-50 | -8.615850e-47 |
| Msa0461590 | Msa0526940 | 0.814516 | 1.480562e-51 | -8.615850e-47 |
| Msa0464900 | Msa0526940 | 0.830087 | 3.576652e-55 | -8.615850e-47 |
| Msa0476880 | Msa0526940 | 0.817142 | 3.844353e-52 | -8.615850e-47 |
| Msa0250670 | Msa0526940 | 0.825562 | 4.381079e-54 | -8.615850e-47 |
| Msa0260810 | Msa0526940 | 0.836127 | 1.122601e-56 | -8.615850e-47 |
| Msa0266000 | Msa0526940 | -0.801646 | 8.163012e-49 | -8.615850e-47 |
| Msa0276920 | Msa0526940 | 0.840324 | 9.315073e-58 | -8.615850e-47 |
| Msa0277420 | Msa0526940 | 0.834971 | 2.201487e-56 | -8.615850e-47 |
| Msa0282250 | Msa0526940 | 0.810568 | 1.080310e-50 | -8.615850e-47 |
| Msa0287650 | Msa0526940 | 0.802091 | 6.613218e-49 | -8.615850e-47 |
| Msa0289400 | Msa0526940 | 0.827029 | 1.959940e-54 | -8.615850e-47 |
| Msa0292170 | Msa0526940 | 0.802539 | 5.347880e-49 | -8.615850e-47 |
| Msa0305700 | Msa0526940 | 0.816662 | 4.927276e-52 | -8.615850e-47 |
| Msa0315530 | Msa0526940 | 0.807778 | 4.279596e-50 | -8.615850e-47 |
| Msa0316800 | Msa0526940 | 0.809600 | 1.746188e-50 | -8.615850e-47 |
| Msa0317270 | Msa0526940 | 0.840035 | 1.107720e-57 | -8.615850e-47 |
| Msa0326520 | Msa0526940 | 0.816142 | 6.442124e-52 | -8.615850e-47 |
| Msa0327410 | Msa0526940 | 0.807441 | 5.047484e-50 | -8.615850e-47 |
| Msa0333920 | Msa0526940 | 0.816909 | 4.335945e-52 | -8.615850e-47 |
| Msa0334040 | Msa0526940 | 0.823782 | 1.150928e-53 | -8.615850e-47 |
| Msa0335040 | Msa0526940 | 0.805039 | 1.617883e-49 | -8.615850e-47 |
| Msa0336250 | Msa0526940 | 0.802359 | 5.825345e-49 | -8.615850e-47 |
| Msa0484780 | Msa0526940 | 0.826758 | 2.275411e-54 | -8.615850e-47 |
| Msa0495320 | Msa0526940 | 0.823768 | 1.159364e-53 | -8.615850e-47 |
| Msa0495330 | Msa0526940 | 0.809765 | 1.609490e-50 | -8.615850e-47 |
| Msa0506790 | Msa0526940 | 0.820468 | 6.752610e-53 | -8.615850e-47 |
| Msa0517090 | Msa0526940 | 0.801011 | 1.100961e-48 | -8.615850e-47 |
| Msa0523460 | Msa0526940 | 0.826485 | 2.643325e-54 | -8.615850e-47 |
| Msa0526940 | Msa0530650 | 0.813965 | 1.959136e-51 | -8.615850e-47 |
| Msa0526940 | Msa0572420 | 0.817006 | 4.124691e-52 | -8.615850e-47 |
| Msa0526940 | Msa0576890 | 0.802422 | 5.652148e-49 | -8.615850e-47 |
| Msa0526940 | Msa0577200 | -0.815103 | 1.097514e-51 | -8.615850e-47 |
| Msa0526940 | Msa0578970 | 0.803777 | 2.965028e-49 | -8.615850e-47 |
| Msa0526940 | Msa0587190 | 0.817944 | 2.536008e-52 | -8.615850e-47 |
| Msa0526940 | Msa0610590 | 0.803611 | 3.210223e-49 | -8.615850e-47 |
| Msa0526940 | Msa0613090 | 0.801973 | 6.992213e-49 | -8.615850e-47 |
| Msa0526940 | Msa0626220 | 0.849098 | 4.020274e-60 | -8.615850e-47 |
| Msa0526940 | Msa0626990 | 0.815550 | 8.728413e-52 | -8.615850e-47 |
| Msa0526940 | Msa0627350 | 0.815799 | 7.683775e-52 | -8.615850e-47 |
| Msa0526940 | Msa0628290 | 0.810788 | 9.685205e-51 | -8.615850e-47 |
| Msa0526940 | Msa0628500 | 0.809145 | 2.186650e-50 | -8.615850e-47 |
| Msa0526940 | Msa0657750 | 0.805263 | 1.452394e-49 | -8.615850e-47 |
| Msa0526940 | Msa0663120 | 0.805262 | 1.453277e-49 | -8.615850e-47 |
| Msa0526940 | Msa0667050 | 0.804585 | 2.012467e-49 | -8.615850e-47 |
| Msa0526940 | Msa0679550 | 0.801861 | 7.373422e-49 | -8.615850e-47 |
| Msa0526940 | Msa0682550 | 0.804414 | 2.185263e-49 | -8.615850e-47 |
| Msa0526940 | Msa0693380 | 0.811493 | 6.812275e-51 | -8.615850e-47 |
| Msa0526940 | Msa0723990 | 0.801346 | 9.403441e-49 | -8.615850e-47 |
| Msa0526940 | Msa0724000 | 0.804228 | 2.389330e-49 | -8.615850e-47 |
| Msa0526940 | Msa0735620 | -0.822708 | 2.050179e-53 | -8.615850e-47 |
| Msa0526940 | Msa0747720 | -0.837388 | 5.354036e-57 | -8.615850e-47 |
| Msa0526940 | Msa0750330 | -0.811902 | 5.548787e-51 | -8.615850e-47 |
| Msa0526940 | Msa0757050 | 0.807704 | 4.438725e-50 | -8.615850e-47 |
| Msa0526940 | Msa0758580 | 0.847823 | 9.060271e-60 | -8.615850e-47 |
| Msa0526940 | Msa0783740 | 0.805002 | 1.647513e-49 | -8.615850e-47 |
| Msa0526940 | Msa0811130 | 0.806956 | 6.392574e-50 | -8.615850e-47 |
| Msa0526940 | Msa0820890 | 0.807192 | 5.699225e-50 | -8.615850e-47 |
| Msa0526940 | Msa0828920 | 0.807904 | 4.023676e-50 | -8.615850e-47 |
| Msa0526940 | Msa0829190 | 0.833005 | 6.837777e-56 | -8.615850e-47 |
| Msa0526940 | Msa0866400 | 0.806180 | 9.324316e-50 | -8.615850e-47 |
| Msa0526940 | Msa0888680 | 0.808171 | 3.530078e-50 | -8.615850e-47 |
| Msa0526940 | Msa0891600 | -0.813417 | 2.586367e-51 | -8.615850e-47 |
| Msa0526940 | Msa0893810 | 0.833780 | 4.380717e-56 | -8.615850e-47 |
| Msa0526940 | Msa0896220 | 0.812161 | 4.873753e-51 | -8.615850e-47 |
| Msa0526940 | Msa0900620 | 0.801857 | 7.386185e-49 | -8.615850e-47 |
| Msa0526940 | Msa0908050 | 0.805240 | 1.469009e-49 | -8.615850e-47 |
| Msa0526940 | Msa0908170 | 0.818043 | 2.408586e-52 | -8.615850e-47 |
| Msa0526940 | Msa0910980 | -0.814526 | 1.473226e-51 | -8.615850e-47 |
| Msa0526940 | Msa0926370 | 0.806492 | 8.011015e-50 | -8.615850e-47 |
| Msa0526940 | Msa0930400 | -0.831646 | 1.483888e-55 | -8.615850e-47 |
| Msa0526940 | Msa0954550 | 0.803224 | 3.860830e-49 | -8.615850e-47 |
| Msa0526940 | Msa0967370 | 0.806601 | 7.600452e-50 | -8.615850e-47 |
| Msa0526940 | Msa0969520 | 0.809546 | 1.794178e-50 | -8.615850e-47 |
| Msa0526940 | Msa0981310 | 0.808557 | 2.921366e-50 | -8.615850e-47 |
| Msa0526940 | Msa0982240 | 0.803788 | 2.949000e-49 | -8.615850e-47 |
| Msa0526940 | Msa1004420 | 0.807685 | 4.480226e-50 | -8.615850e-47 |
| Msa0526940 | Msa1010460 | 0.807018 | 6.204870e-50 | -8.615850e-47 |
| Msa0526940 | Msa1019710 | 0.813393 | 2.618134e-51 | -8.615850e-47 |
| Msa0526940 | Msa1021510 | 0.821623 | 3.658484e-53 | -8.615850e-47 |
| Msa0526940 | Msa1031770 | 0.807268 | 5.491091e-50 | -8.615850e-47 |
| Msa0526940 | Msa1032170 | 0.858470 | 8.059054e-63 | -8.615850e-47 |
| Msa0526940 | Msa1040520 | 0.967150 | 6.972414e-127 | -8.615850e-47 |
| Msa0526940 | Msa1053200 | 0.816216 | 6.200208e-52 | -8.615850e-47 |
| Msa0526940 | Msa1068200 | -0.811576 | 6.533973e-51 | -8.615850e-47 |
| Msa0526940 | Msa1070690 | 0.807207 | 5.658051e-50 | -8.615850e-47 |
| Msa0526940 | Msa1070840 | 0.803051 | 4.191410e-49 | -8.615850e-47 |
| Msa0526940 | Msa1075220 | -0.801944 | 7.088715e-49 | -8.615850e-47 |
| Msa0526940 | Msa1080160 | 0.808660 | 2.776689e-50 | -8.615850e-47 |
| Msa0526940 | Msa1082500 | 0.824979 | 6.016790e-54 | -8.615850e-47 |
| Msa0526940 | Msa1083260 | 0.804450 | 2.148133e-49 | -8.615850e-47 |
| Msa0526940 | Msa1087470 | 0.824446 | 8.036670e-54 | -8.615850e-47 |
| Msa0526940 | Msa1098270 | 0.803600 | 3.226857e-49 | -8.615850e-47 |
| Msa0526940 | Msa1105500 | 0.829895 | 3.985329e-55 | -8.615850e-47 |
| Msa0526940 | Msa1113590 | 0.825750 | 3.953819e-54 | -8.615850e-47 |
| Msa0526940 | Msa1118760 | 0.807003 | 6.250728e-50 | -8.615850e-47 |
| Msa0526940 | Msa1127770 | 0.970827 | 3.264909e-132 | -8.615850e-47 |
| Msa0526940 | Msa1130270 | -0.804715 | 1.890837e-49 | -8.615850e-47 |
| Msa0526940 | Msa1133220 | 0.842274 | 2.858742e-58 | -8.615850e-47 |
| Msa0526940 | Msa1149710 | 0.803804 | 2.926326e-49 | -8.615850e-47 |
| Msa0526940 | Msa1152950 | 0.814657 | 1.378082e-51 | -8.615850e-47 |
| Msa0526940 | Msa1158660 | 0.809593 | 1.752190e-50 | -8.615850e-47 |
| Msa0526940 | Msa1159130 | 0.825074 | 5.716217e-54 | -8.615850e-47 |
| Msa0526940 | Msa1162550 | -0.805082 | 1.585080e-49 | -8.615850e-47 |
| Msa0526940 | Msa1174850 | 0.811255 | 7.672298e-51 | -8.615850e-47 |
| Msa0526940 | Msa1179940 | 0.813653 | 2.295553e-51 | -8.615850e-47 |
| Msa0526940 | Msa1179970 | 0.815358 | 9.629317e-52 | -8.615850e-47 |
| Msa0526940 | Msa1214880 | 0.837591 | 4.750154e-57 | -8.615850e-47 |
| Msa0526940 | Msa1253450 | 0.804391 | 2.209276e-49 | -8.615850e-47 |
| Msa0526940 | Msa1266020 | 0.805859 | 1.089093e-49 | -8.615850e-47 |
| Msa0526940 | Msa1295630 | 0.801767 | 7.709737e-49 | -8.615850e-47 |
| Msa0526940 | Msa1300860 | 0.802623 | 5.138111e-49 | -8.615850e-47 |
| Msa0526940 | Msa1313150 | 0.813256 | 2.806651e-51 | -8.615850e-47 |
| Msa0526940 | Msa1320820 | 0.809543 | 1.796399e-50 | -8.615850e-47 |
| Msa0526940 | Msa1331920 | 0.832227 | 1.065850e-55 | -8.615850e-47 |
| Msa0526940 | Msa1338250 | 0.802273 | 6.065707e-49 | -8.615850e-47 |
| Msa0526940 | Msa1340650 | 0.808956 | 2.400136e-50 | -8.615850e-47 |
| Msa0526940 | Msa1341570 | 0.833219 | 6.048172e-56 | -8.615850e-47 |
| Msa0526940 | Msa1359650 | -0.806574 | 7.698782e-50 | -8.615850e-47 |
| Msa0526940 | Msa1359920 | 0.804997 | 1.650831e-49 | -8.615850e-47 |
| Msa0526940 | Msa1366300 | 0.800920 | 1.149096e-48 | -8.615850e-47 |
| Msa0526940 | Msa1376890 | 0.800455 | 1.429456e-48 | -8.615850e-47 |
| Msa0526940 | Msa1379590 | 0.852847 | 3.527438e-61 | -8.615850e-47 |
| Msa0526940 | Msa1379850 | 0.808547 | 2.935874e-50 | -8.615850e-47 |
| Msa0526940 | Msa1396780 | 0.826416 | 2.745837e-54 | -8.615850e-47 |
| Msa0526940 | Msa1398860 | 0.838974 | 2.090908e-57 | -8.615850e-47 |
| Msa0526940 | Msa1404540 | 0.827382 | 1.613580e-54 | -8.615850e-47 |
| Msa0526940 | Msa1408790 | 0.825319 | 5.001941e-54 | -8.615850e-47 |
| Msa0526940 | Msa1410390 | 0.814760 | 1.307237e-51 | -8.615850e-47 |
| Msa0526940 | Msa1422840 | 0.801687 | 8.005250e-49 | -8.615850e-47 |
| Msa0526940 | Msa1423880 | 0.810721 | 1.001391e-50 | -8.615850e-47 |
| Msa0526940 | Msa1424640 | 0.852562 | 4.256789e-61 | -8.615850e-47 |
| Msa0526940 | Msa1431060 | 0.831234 | 1.874055e-55 | -8.615850e-47 |
| Msa0526940 | Msa1435400 | 0.825004 | 5.936937e-54 | -8.615850e-47 |
| Msa0526940 | Msa1436040 | 0.816214 | 6.207513e-52 | -8.615850e-47 |
| Msa0526940 | Msa1440600 | 0.833340 | 5.640452e-56 | -8.615850e-47 |
| Msa0526940 | Msa1440940 | 0.810616 | 1.054885e-50 | -8.615850e-47 |
| Msa0526940 | Msa1447150 | 0.809813 | 1.572064e-50 | -8.615850e-47 |
| Msa0526940 | Msa1457430 | 0.852123 | 5.673544e-61 | -8.615850e-47 |
| Msa0526940 | Msa1459180 | 0.818162 | 2.263063e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526940 | MtrunA17_Chr7g0270921 | 96.897 | 290 | 7 | 2 | 1 | 289 | 1 | 289 | 0.0 | 574 |
| Msa0526940 | MtrunA17_Chr1g0213571 | 49.275 | 69 | 33 | 2 | 214 | 280 | 41 | 109 | 2.96e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526940 | AT2G46940.1 | 41.497 | 294 | 122 | 12 | 1 | 286 | 1 | 252 | 5.47e-52 | 171 |
| Msa0526940 | AT3G62070.1 | 45.977 | 261 | 89 | 12 | 37 | 289 | 12 | 228 | 1.09e-44 | 151 |
| Msa0526940 | AT4G01670.1 | 41.812 | 287 | 102 | 8 | 19 | 287 | 4 | 243 | 6.27e-43 | 147 |
| Msa0526940 | AT2G31560.2 | 41.489 | 94 | 28 | 2 | 214 | 280 | 102 | 195 | 3.10e-13 | 67.8 |
| Msa0526940 | AT2G31560.1 | 41.489 | 94 | 28 | 2 | 214 | 280 | 102 | 195 | 3.10e-13 | 67.8 |
| Msa0526940 | AT2G31560.3 | 41.489 | 94 | 28 | 2 | 214 | 280 | 102 | 195 | 3.10e-13 | 67.8 |
| Msa0526940 | AT2G43340.1 | 41.489 | 94 | 28 | 2 | 214 | 280 | 89 | 182 | 9.36e-13 | 65.9 |
| Msa0526940 | AT1G05870.4 | 42.105 | 95 | 27 | 3 | 214 | 280 | 88 | 182 | 3.06e-12 | 64.7 |
| Msa0526940 | AT1G05870.12 | 42.105 | 95 | 27 | 3 | 214 | 280 | 88 | 182 | 3.06e-12 | 64.7 |
| Msa0526940 | AT1G05870.8 | 42.105 | 95 | 27 | 3 | 214 | 280 | 88 | 182 | 3.06e-12 | 64.7 |
| Msa0526940 | AT1G05870.1 | 42.105 | 95 | 27 | 3 | 214 | 280 | 88 | 182 | 3.06e-12 | 64.7 |
| Msa0526940 | AT1G05870.7 | 42.105 | 95 | 27 | 3 | 214 | 280 | 88 | 182 | 3.06e-12 | 64.7 |
| Msa0526940 | AT1G05870.2 | 42.105 | 95 | 27 | 3 | 214 | 280 | 88 | 182 | 3.06e-12 | 64.7 |
| Msa0526940 | AT1G05870.10 | 42.105 | 95 | 27 | 3 | 214 | 280 | 88 | 182 | 3.06e-12 | 64.7 |
| Msa0526940 | AT1G05870.5 | 42.105 | 95 | 27 | 3 | 214 | 280 | 88 | 182 | 3.06e-12 | 64.7 |
| Msa0526940 | AT1G05870.9 | 42.105 | 95 | 27 | 3 | 214 | 280 | 88 | 182 | 3.06e-12 | 64.7 |
| Msa0526940 | AT1G05870.3 | 42.105 | 95 | 27 | 3 | 214 | 280 | 88 | 182 | 3.06e-12 | 64.7 |
| Msa0526940 | AT1G05870.6 | 42.105 | 95 | 27 | 3 | 214 | 280 | 88 | 182 | 3.06e-12 | 64.7 |
| Msa0526940 | AT1G05870.11 | 42.105 | 95 | 27 | 3 | 214 | 280 | 88 | 182 | 3.06e-12 | 64.7 |
Find 82 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATAGTTGGGAGAATTTA+TGG | 0.098125 | 3_4:-81066927 | Msa0526940:CDS |
| AGAAGAGTGTATTATATTAA+TGG | 0.264708 | 3_4:+81067498 | None:intergenic |
| TAGGAGTTTGTGTATGGATT+TGG | 0.274372 | 3_4:-81066791 | Msa0526940:CDS |
| AGAAACAAAGGAAAGTAGTT+TGG | 0.276827 | 3_4:-81067001 | Msa0526940:CDS |
| GTAATTCACCTATTGCTAAT+TGG | 0.279198 | 3_4:-81066669 | Msa0526940:CDS |
| GTATTAGCTATCAAGAAAAT+TGG | 0.318702 | 3_4:+81066326 | None:intergenic |
| GTTAAAGCTTGTAGAGATCT+TGG | 0.319724 | 3_4:-81066763 | Msa0526940:CDS |
| GAGAAGAGAATTAGTAGTAG+AGG | 0.335248 | 3_4:+81067574 | None:intergenic |
| AGTCGTGCCTTCACATCTCT+TGG | 0.356137 | 3_4:+81066407 | None:intergenic |
| AGGTAGTTGTTATTCGTTAC+CGG | 0.356574 | 3_4:-81067106 | Msa0526940:CDS |
| CTGAAAGCCTTGACAAGTTA+TGG | 0.375744 | 3_4:+81067310 | None:intergenic |
| AGGAAAGTAGTTTGGGAGGT+AGG | 0.378983 | 3_4:-81066993 | Msa0526940:CDS |
| AAATAGTTGGGAGAATTTAT+GGG | 0.384282 | 3_4:-81066926 | Msa0526940:CDS |
| ATGGGATCAGAAGAAGAAAA+TGG | 0.385872 | 3_4:-81066908 | Msa0526940:CDS |
| ATCAGCTTCAAAACTTTCAA+TGG | 0.388916 | 3_4:+81067221 | None:intergenic |
| GAAACAAAGGAAAGTAGTTT+GGG | 0.390177 | 3_4:-81067000 | Msa0526940:CDS |
| TGGGAATAGGAGTTTGTGTA+TGG | 0.391612 | 3_4:-81066797 | Msa0526940:CDS |
| CTGGGGTGATGGTGATTACT+AGG | 0.398778 | 3_4:-81066828 | Msa0526940:CDS |
| ACCACCAAGACGGAGGAGTT+TGG | 0.404035 | 3_4:-81067079 | Msa0526940:CDS |
| TTGGTTCCGGTGAGTGTTGT+TGG | 0.406202 | 3_4:-81067060 | Msa0526940:CDS |
| TGGGTGTCATGAGCCGTATT+TGG | 0.411466 | 3_4:+81066346 | None:intergenic |
| ATCATTCGTTTCTTGTGATA+AGG | 0.412876 | 3_4:+81067549 | None:intergenic |
| AAACTCCTATTCCCACCTTT+AGG | 0.424753 | 3_4:+81066805 | None:intergenic |
| TTCATCTTGAATTGTGATCA+TGG | 0.426005 | 3_4:+81067398 | None:intergenic |
| GGAGAGAGTGATCAGAGTAC+TGG | 0.429926 | 3_4:-81066847 | Msa0526940:CDS |
| GTTTGGGAGGTAGGAGAAGA+AGG | 0.431849 | 3_4:-81066984 | Msa0526940:CDS |
| ACCCGAAAATCCAGCACCCT+TGG | 0.435217 | 3_4:+81066151 | None:intergenic |
| ATAGCATCTGCCACCAAATA+CGG | 0.446123 | 3_4:-81066359 | Msa0526940:CDS |
| CTAGGCCTAAAGGTGGGAAT+AGG | 0.446339 | 3_4:-81066810 | Msa0526940:CDS |
| GAATGAGAAGTGTGTTTGAA+AGG | 0.457694 | 3_4:-81066951 | Msa0526940:CDS |
| AGAAGAGAATTAGTAGTAGA+GGG | 0.459351 | 3_4:+81067575 | None:intergenic |
| GTAGGAGAAGAAGGAGGAGA+AGG | 0.459589 | 3_4:-81066975 | Msa0526940:CDS |
| TAGAGATCTTGGATTTGAGT+TGG | 0.463756 | 3_4:-81066752 | Msa0526940:CDS |
| GAGATTCGCCAATTAGCAAT+AGG | 0.470838 | 3_4:+81066661 | None:intergenic |
| CTCCGTCTTGGTGGTGTCAC+CGG | 0.472824 | 3_4:+81067087 | None:intergenic |
| GTTTGAAAGGGGAAATAGTT+GGG | 0.473057 | 3_4:-81066938 | Msa0526940:CDS |
| GATGATGATTATATTAATGA+TGG | 0.473168 | 3_4:-81067360 | Msa0526940:CDS |
| TTAGAGAATGGTGTGAATAG+TGG | 0.473221 | 3_4:-81066868 | Msa0526940:CDS |
| TCTGGCTCTGAAAATGAATC+AGG | 0.473699 | 3_4:-81067126 | Msa0526940:CDS |
| CTACAACCAGGGTTGTCCTC+TGG | 0.474101 | 3_4:-81067144 | Msa0526940:CDS |
| TATTAGCTATCAAGAAAATT+GGG | 0.476538 | 3_4:+81066327 | None:intergenic |
| GAGAAAGAGAAATTAGAGAA+TGG | 0.488744 | 3_4:-81066880 | Msa0526940:CDS |
| AATGAGAAGTGTGTTTGAAA+GGG | 0.496838 | 3_4:-81066950 | Msa0526940:CDS |
| CCCGAAAATCCAGCACCCTT+GGG | 0.499548 | 3_4:+81066152 | None:intergenic |
| ACCAAACTCCTCCGTCTTGG+TGG | 0.500700 | 3_4:+81067078 | None:intergenic |
| AAGACGGAGGAGTTTGGTTC+CGG | 0.500715 | 3_4:-81067073 | Msa0526940:CDS |
| GAGAGAGTGATCAGAGTACT+GGG | 0.504015 | 3_4:-81066846 | Msa0526940:CDS |
| TGTTTGAAAGGGGAAATAGT+TGG | 0.505309 | 3_4:-81066939 | Msa0526940:CDS |
| ATTGCTAATTGGCGAATCTC+CGG | 0.508950 | 3_4:-81066658 | Msa0526940:CDS |
| TTCACTCCAACAACACTCAC+CGG | 0.546445 | 3_4:+81067054 | None:intergenic |
| AATTGGCGAATCTCCGGTCC+CGG | 0.547996 | 3_4:-81066652 | Msa0526940:intron |
| GGAACCAAACTCCTCCGTCT+TGG | 0.552249 | 3_4:+81067075 | None:intergenic |
| ATGGTGATTACTAGGCCTAA+AGG | 0.564020 | 3_4:-81066820 | Msa0526940:CDS |
| AAATTGAGAATTACCGGGAC+CGG | 0.564355 | 3_4:+81066639 | None:intergenic |
| ATGAGAAGTGTGTTTGAAAG+GGG | 0.566156 | 3_4:-81066949 | Msa0526940:CDS |
| AAAATCACCATAACTTGTCA+AGG | 0.567296 | 3_4:-81067317 | Msa0526940:CDS |
| AAAATTTGGCATAAATAGAG+TGG | 0.569989 | 3_4:-81067611 | Msa0526940:five_prime_UTR |
| ACAAAGGAAAGTAGTTTGGG+AGG | 0.570208 | 3_4:-81066997 | Msa0526940:CDS |
| CATTCTATAACTGATCATAG+TGG | 0.570982 | 3_4:+81066224 | None:intergenic |
| ATGATGATTATATTAATGAT+GGG | 0.578381 | 3_4:-81067359 | Msa0526940:CDS |
| TGAAGCAAGAAAAGAAACAA+AGG | 0.581851 | 3_4:-81067013 | Msa0526940:CDS |
| ACGACTCAAAGTGTGGGCAC+AGG | 0.585079 | 3_4:-81066390 | Msa0526940:CDS |
| TGATGATCCAAGAGATGTGA+AGG | 0.588464 | 3_4:-81066414 | Msa0526940:CDS |
| GAAGAGAATTAGTAGTAGAG+GGG | 0.593049 | 3_4:+81067576 | None:intergenic |
| TGAAGGCACGACTCAAAGTG+TGG | 0.596523 | 3_4:-81066397 | Msa0526940:CDS |
| TGATCAGAGTACTGGGGTGA+TGG | 0.602328 | 3_4:-81066839 | Msa0526940:CDS |
| GTGTCATGAGCCGTATTTGG+TGG | 0.611631 | 3_4:+81066349 | None:intergenic |
| TGGGAGGTAGGAGAAGAAGG+AGG | 0.614935 | 3_4:-81066981 | Msa0526940:CDS |
| TCAGAGCCAGAGGACAACCC+TGG | 0.618857 | 3_4:+81067138 | None:intergenic |
| GATGATCAGTTACTACAACC+AGG | 0.625986 | 3_4:-81067156 | Msa0526940:CDS |
| ATGATCAGTTACTACAACCA+GGG | 0.630170 | 3_4:-81067155 | Msa0526940:CDS |
| GTGATTACTAGGCCTAAAGG+TGG | 0.635360 | 3_4:-81066817 | Msa0526940:CDS |
| TACCGGTGACACCACCAAGA+CGG | 0.643200 | 3_4:-81067089 | Msa0526940:CDS |
| ACACTTGATACTAGTAGTGG+TGG | 0.643694 | 3_4:-81066691 | Msa0526940:CDS |
| TCAACACTTGATACTAGTAG+TGG | 0.666554 | 3_4:-81066694 | Msa0526940:CDS |
| GAAGGCACGACTCAAAGTGT+GGG | 0.668787 | 3_4:-81066396 | Msa0526940:CDS |
| TGATTACTAGGCCTAAAGGT+GGG | 0.670590 | 3_4:-81066816 | Msa0526940:CDS |
| GGACAAGTTTGACATACACA+TGG | 0.672211 | 3_4:+81067242 | None:intergenic |
| CGGTGACACCACCAAGACGG+AGG | 0.698426 | 3_4:-81067086 | Msa0526940:CDS |
| TATACACTTCCACTGTACAG+AGG | 0.707736 | 3_4:+81066111 | None:intergenic |
| GATGGTGGTGATGAAGCAGA+TGG | 0.717318 | 3_4:-81067201 | Msa0526940:CDS |
| AGAGAGTGATCAGAGTACTG+GGG | 0.764816 | 3_4:-81066845 | Msa0526940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTGTATTATATTATGT+AGG | - | chr3_4:81067235-81067254 | Msa0526940:CDS | 10.0% |
| !!! | CATTGTATTTTTTTTTTTTT+TGG | - | chr3_4:81067476-81067495 | Msa0526940:five_prime_UTR | 10.0% |
| !!! | ATTTTTGTATTATATTATGT+AGG | - | chr3_4:81067235-81067254 | Msa0526940:CDS | 10.0% |
| !!! | CATTGTATTTTTTTTTTTTT+TGG | - | chr3_4:81067476-81067495 | Msa0526940:five_prime_UTR | 10.0% |
| !! | ATGATGATTATATTAATGAT+GGG | - | chr3_4:81066313-81066332 | Msa0526940:three_prime_UTR | 15.0% |
| !! | ATAAACATTATAAGATTGTT+TGG | - | chr3_4:81067104-81067123 | Msa0526940:CDS | 15.0% |
| !! | ATGATGATTATATTAATGAT+GGG | - | chr3_4:81066313-81066332 | Msa0526940:three_prime_UTR | 15.0% |
| !! | ATAAACATTATAAGATTGTT+TGG | - | chr3_4:81067104-81067123 | Msa0526940:CDS | 15.0% |
| !!! | AGAAGAGTGTATTATATTAA+TGG | + | chr3_4:81066177-81066196 | None:intergenic | 20.0% |
| !!! | GTACGTTCTTTTTTTATATA+TGG | - | chr3_4:81066239-81066258 | Msa0526940:three_prime_UTR | 20.0% |
| !! | GATGATGATTATATTAATGA+TGG | - | chr3_4:81066312-81066331 | Msa0526940:three_prime_UTR | 20.0% |
| !! | AAAACAATTTATGACATGTT+CGG | - | chr3_4:81067138-81067157 | Msa0526940:CDS | 20.0% |
| !! | TATTAGCTATCAAGAAAATT+GGG | + | chr3_4:81067348-81067367 | None:intergenic | 20.0% |
| !!! | AGAAGAGTGTATTATATTAA+TGG | + | chr3_4:81066177-81066196 | None:intergenic | 20.0% |
| !!! | GTACGTTCTTTTTTTATATA+TGG | - | chr3_4:81066239-81066258 | Msa0526940:three_prime_UTR | 20.0% |
| !! | GATGATGATTATATTAATGA+TGG | - | chr3_4:81066312-81066331 | Msa0526940:three_prime_UTR | 20.0% |
| !! | AAAACAATTTATGACATGTT+CGG | - | chr3_4:81067138-81067157 | Msa0526940:CDS | 20.0% |
| !! | TATTAGCTATCAAGAAAATT+GGG | + | chr3_4:81067348-81067367 | None:intergenic | 20.0% |
| ! | AAAATTTGGCATAAATAGAG+TGG | - | chr3_4:81066061-81066080 | Msa0526940:three_prime_UTR | 25.0% |
| !!! | AAGAACGTACTATTTTGTTT+TGG | + | chr3_4:81066229-81066248 | None:intergenic | 25.0% |
| ! | AAATAGTTGGGAGAATTTAT+GGG | - | chr3_4:81066746-81066765 | Msa0526940:CDS | 25.0% |
| ! | GTATTAGCTATCAAGAAAAT+TGG | + | chr3_4:81067349-81067368 | None:intergenic | 25.0% |
| !!! | TAATACCTACTTCCTTTTTT+TGG | - | chr3_4:81067363-81067382 | Msa0526940:CDS | 25.0% |
| !!! | TTGTCATAAATTTTTTCCCA+AGG | - | chr3_4:81067504-81067523 | Msa0526940:five_prime_UTR | 25.0% |
| !!! | TGTCATAAATTTTTTCCCAA+GGG | - | chr3_4:81067505-81067524 | Msa0526940:five_prime_UTR | 25.0% |
| !!! | TTTTTGTTTAAACTGCTTAC+TGG | - | chr3_4:81067591-81067610 | Msa0526940:five_prime_UTR | 25.0% |
| ! | AAAATTTGGCATAAATAGAG+TGG | - | chr3_4:81066061-81066080 | Msa0526940:three_prime_UTR | 25.0% |
| !!! | AAGAACGTACTATTTTGTTT+TGG | + | chr3_4:81066229-81066248 | None:intergenic | 25.0% |
| ! | AAATAGTTGGGAGAATTTAT+GGG | - | chr3_4:81066746-81066765 | Msa0526940:CDS | 25.0% |
| ! | GTATTAGCTATCAAGAAAAT+TGG | + | chr3_4:81067349-81067368 | None:intergenic | 25.0% |
| !!! | TAATACCTACTTCCTTTTTT+TGG | - | chr3_4:81067363-81067382 | Msa0526940:CDS | 25.0% |
| !!! | TTGTCATAAATTTTTTCCCA+AGG | - | chr3_4:81067504-81067523 | Msa0526940:five_prime_UTR | 25.0% |
| !!! | TGTCATAAATTTTTTCCCAA+GGG | - | chr3_4:81067505-81067524 | Msa0526940:five_prime_UTR | 25.0% |
| !!! | TTTTTGTTTAAACTGCTTAC+TGG | - | chr3_4:81067591-81067610 | Msa0526940:five_prime_UTR | 25.0% |
| AGAAGAGAATTAGTAGTAGA+GGG | + | chr3_4:81066100-81066119 | None:intergenic | 30.0% | |
| ATCATTCGTTTCTTGTGATA+AGG | + | chr3_4:81066126-81066145 | None:intergenic | 30.0% | |
| TTCATCTTGAATTGTGATCA+TGG | + | chr3_4:81066277-81066296 | None:intergenic | 30.0% | |
| ! | AAAATCACCATAACTTGTCA+AGG | - | chr3_4:81066355-81066374 | Msa0526940:CDS | 30.0% |
| ATCAGCTTCAAAACTTTCAA+TGG | + | chr3_4:81066454-81066473 | None:intergenic | 30.0% | |
| !!! | ATTGAAAGTTTTGAAGCTGA+TGG | - | chr3_4:81066453-81066472 | Msa0526940:intron | 30.0% |
| TGAAGCAAGAAAAGAAACAA+AGG | - | chr3_4:81066659-81066678 | Msa0526940:CDS | 30.0% | |
| AGAAACAAAGGAAAGTAGTT+TGG | - | chr3_4:81066671-81066690 | Msa0526940:CDS | 30.0% | |
| GAAACAAAGGAAAGTAGTTT+GGG | - | chr3_4:81066672-81066691 | Msa0526940:CDS | 30.0% | |
| ! | AATGAGAAGTGTGTTTGAAA+GGG | - | chr3_4:81066722-81066741 | Msa0526940:CDS | 30.0% |
| GAAATAGTTGGGAGAATTTA+TGG | - | chr3_4:81066745-81066764 | Msa0526940:CDS | 30.0% | |
| GAGAAAGAGAAATTAGAGAA+TGG | - | chr3_4:81066792-81066811 | Msa0526940:CDS | 30.0% | |
| GTAATTCACCTATTGCTAAT+TGG | - | chr3_4:81067003-81067022 | Msa0526940:CDS | 30.0% | |
| AACCAAAATTGAGAATTACC+GGG | + | chr3_4:81067041-81067060 | None:intergenic | 30.0% | |
| GAACCAAAATTGAGAATTAC+CGG | + | chr3_4:81067042-81067061 | None:intergenic | 30.0% | |
| ! | TTTGGTTCATATTTCCGATT+AGG | - | chr3_4:81067054-81067073 | Msa0526940:CDS | 30.0% |
| TAAGCGCGTATCATATATTA+TGG | + | chr3_4:81067182-81067201 | None:intergenic | 30.0% | |
| CATTCTATAACTGATCATAG+TGG | + | chr3_4:81067451-81067470 | None:intergenic | 30.0% | |
| AGAAGAGAATTAGTAGTAGA+GGG | + | chr3_4:81066100-81066119 | None:intergenic | 30.0% | |
| ATCATTCGTTTCTTGTGATA+AGG | + | chr3_4:81066126-81066145 | None:intergenic | 30.0% | |
| TTCATCTTGAATTGTGATCA+TGG | + | chr3_4:81066277-81066296 | None:intergenic | 30.0% | |
| ! | AAAATCACCATAACTTGTCA+AGG | - | chr3_4:81066355-81066374 | Msa0526940:CDS | 30.0% |
| ATCAGCTTCAAAACTTTCAA+TGG | + | chr3_4:81066454-81066473 | None:intergenic | 30.0% | |
| !!! | ATTGAAAGTTTTGAAGCTGA+TGG | - | chr3_4:81066453-81066472 | Msa0526940:intron | 30.0% |
| TGAAGCAAGAAAAGAAACAA+AGG | - | chr3_4:81066659-81066678 | Msa0526940:CDS | 30.0% | |
| AGAAACAAAGGAAAGTAGTT+TGG | - | chr3_4:81066671-81066690 | Msa0526940:CDS | 30.0% | |
| GAAACAAAGGAAAGTAGTTT+GGG | - | chr3_4:81066672-81066691 | Msa0526940:CDS | 30.0% | |
| ! | AATGAGAAGTGTGTTTGAAA+GGG | - | chr3_4:81066722-81066741 | Msa0526940:CDS | 30.0% |
| GAAATAGTTGGGAGAATTTA+TGG | - | chr3_4:81066745-81066764 | Msa0526940:CDS | 30.0% | |
| GAGAAAGAGAAATTAGAGAA+TGG | - | chr3_4:81066792-81066811 | Msa0526940:CDS | 30.0% | |
| GTAATTCACCTATTGCTAAT+TGG | - | chr3_4:81067003-81067022 | Msa0526940:CDS | 30.0% | |
| AACCAAAATTGAGAATTACC+GGG | + | chr3_4:81067041-81067060 | None:intergenic | 30.0% | |
| GAACCAAAATTGAGAATTAC+CGG | + | chr3_4:81067042-81067061 | None:intergenic | 30.0% | |
| ! | TTTGGTTCATATTTCCGATT+AGG | - | chr3_4:81067054-81067073 | Msa0526940:CDS | 30.0% |
| TAAGCGCGTATCATATATTA+TGG | + | chr3_4:81067182-81067201 | None:intergenic | 30.0% | |
| CATTCTATAACTGATCATAG+TGG | + | chr3_4:81067451-81067470 | None:intergenic | 30.0% | |
| GAAGAGAATTAGTAGTAGAG+GGG | + | chr3_4:81066099-81066118 | None:intergenic | 35.0% | |
| GAGAAGAGAATTAGTAGTAG+AGG | + | chr3_4:81066101-81066120 | None:intergenic | 35.0% | |
| ATGATCAGTTACTACAACCA+GGG | - | chr3_4:81066517-81066536 | Msa0526940:intron | 35.0% | |
| ! | AGGTAGTTGTTATTCGTTAC+CGG | - | chr3_4:81066566-81066585 | Msa0526940:intron | 35.0% |
| ! | GAATGAGAAGTGTGTTTGAA+AGG | - | chr3_4:81066721-81066740 | Msa0526940:CDS | 35.0% |
| ! | ATGAGAAGTGTGTTTGAAAG+GGG | - | chr3_4:81066723-81066742 | Msa0526940:CDS | 35.0% |
| TGTTTGAAAGGGGAAATAGT+TGG | - | chr3_4:81066733-81066752 | Msa0526940:CDS | 35.0% | |
| GTTTGAAAGGGGAAATAGTT+GGG | - | chr3_4:81066734-81066753 | Msa0526940:CDS | 35.0% | |
| ATGGGATCAGAAGAAGAAAA+TGG | - | chr3_4:81066764-81066783 | Msa0526940:CDS | 35.0% | |
| TTAGAGAATGGTGTGAATAG+TGG | - | chr3_4:81066804-81066823 | Msa0526940:CDS | 35.0% | |
| TAGGAGTTTGTGTATGGATT+TGG | - | chr3_4:81066881-81066900 | Msa0526940:CDS | 35.0% | |
| GTTAAAGCTTGTAGAGATCT+TGG | - | chr3_4:81066909-81066928 | Msa0526940:CDS | 35.0% | |
| TAGAGATCTTGGATTTGAGT+TGG | - | chr3_4:81066920-81066939 | Msa0526940:CDS | 35.0% | |
| TCAACACTTGATACTAGTAG+TGG | - | chr3_4:81066978-81066997 | Msa0526940:CDS | 35.0% | |
| ! | CTCGAATAAGTTGACCTAAT+CGG | + | chr3_4:81067071-81067090 | None:intergenic | 35.0% |
| AATCGCCAAAAAAAGGAAGT+AGG | + | chr3_4:81067371-81067390 | None:intergenic | 35.0% | |
| GAAGAGAATTAGTAGTAGAG+GGG | + | chr3_4:81066099-81066118 | None:intergenic | 35.0% | |
| GAGAAGAGAATTAGTAGTAG+AGG | + | chr3_4:81066101-81066120 | None:intergenic | 35.0% | |
| ATGATCAGTTACTACAACCA+GGG | - | chr3_4:81066517-81066536 | Msa0526940:intron | 35.0% | |
| ! | AGGTAGTTGTTATTCGTTAC+CGG | - | chr3_4:81066566-81066585 | Msa0526940:intron | 35.0% |
| ! | GAATGAGAAGTGTGTTTGAA+AGG | - | chr3_4:81066721-81066740 | Msa0526940:CDS | 35.0% |
| ! | ATGAGAAGTGTGTTTGAAAG+GGG | - | chr3_4:81066723-81066742 | Msa0526940:CDS | 35.0% |
| TGTTTGAAAGGGGAAATAGT+TGG | - | chr3_4:81066733-81066752 | Msa0526940:CDS | 35.0% | |
| GTTTGAAAGGGGAAATAGTT+GGG | - | chr3_4:81066734-81066753 | Msa0526940:CDS | 35.0% | |
| ATGGGATCAGAAGAAGAAAA+TGG | - | chr3_4:81066764-81066783 | Msa0526940:CDS | 35.0% | |
| TTAGAGAATGGTGTGAATAG+TGG | - | chr3_4:81066804-81066823 | Msa0526940:CDS | 35.0% | |
| TAGGAGTTTGTGTATGGATT+TGG | - | chr3_4:81066881-81066900 | Msa0526940:CDS | 35.0% | |
| GTTAAAGCTTGTAGAGATCT+TGG | - | chr3_4:81066909-81066928 | Msa0526940:CDS | 35.0% | |
| TAGAGATCTTGGATTTGAGT+TGG | - | chr3_4:81066920-81066939 | Msa0526940:CDS | 35.0% | |
| TCAACACTTGATACTAGTAG+TGG | - | chr3_4:81066978-81066997 | Msa0526940:CDS | 35.0% | |
| ! | CTCGAATAAGTTGACCTAAT+CGG | + | chr3_4:81067071-81067090 | None:intergenic | 35.0% |
| AATCGCCAAAAAAAGGAAGT+AGG | + | chr3_4:81067371-81067390 | None:intergenic | 35.0% | |
| CTGAAAGCCTTGACAAGTTA+TGG | + | chr3_4:81066365-81066384 | None:intergenic | 40.0% | |
| GGACAAGTTTGACATACACA+TGG | + | chr3_4:81066433-81066452 | None:intergenic | 40.0% | |
| !!! | GAAAGTTTTGAAGCTGATGG+TGG | - | chr3_4:81066456-81066475 | Msa0526940:intron | 40.0% |
| ! | GATGGTGAATTTTCTGCTGA+TGG | - | chr3_4:81066489-81066508 | Msa0526940:intron | 40.0% |
| GATGATCAGTTACTACAACC+AGG | - | chr3_4:81066516-81066535 | Msa0526940:intron | 40.0% | |
| ! | TGATTCATTTTCAGAGCCAG+AGG | + | chr3_4:81066547-81066566 | None:intergenic | 40.0% |
| !! | TCTGGCTCTGAAAATGAATC+AGG | - | chr3_4:81066546-81066565 | Msa0526940:intron | 40.0% |
| ACAAAGGAAAGTAGTTTGGG+AGG | - | chr3_4:81066675-81066694 | Msa0526940:CDS | 40.0% | |
| ATGGTGATTACTAGGCCTAA+AGG | - | chr3_4:81066852-81066871 | Msa0526940:CDS | 40.0% | |
| TGATTACTAGGCCTAAAGGT+GGG | - | chr3_4:81066856-81066875 | Msa0526940:CDS | 40.0% | |
| AAACTCCTATTCCCACCTTT+AGG | + | chr3_4:81066870-81066889 | None:intergenic | 40.0% | |
| TGGGAATAGGAGTTTGTGTA+TGG | - | chr3_4:81066875-81066894 | Msa0526940:CDS | 40.0% | |
| ACACTTGATACTAGTAGTGG+TGG | - | chr3_4:81066981-81067000 | Msa0526940:CDS | 40.0% | |
| GAGATTCGCCAATTAGCAAT+AGG | + | chr3_4:81067014-81067033 | None:intergenic | 40.0% | |
| ATTGCTAATTGGCGAATCTC+CGG | - | chr3_4:81067014-81067033 | Msa0526940:CDS | 40.0% | |
| AAATTGAGAATTACCGGGAC+CGG | + | chr3_4:81067036-81067055 | None:intergenic | 40.0% | |
| ! | GTCCCGGTAATTCTCAATTT+TGG | - | chr3_4:81067036-81067055 | Msa0526940:CDS | 40.0% |
| TGATGATCCAAGAGATGTGA+AGG | - | chr3_4:81067258-81067277 | Msa0526940:CDS | 40.0% | |
| ATAGCATCTGCCACCAAATA+CGG | - | chr3_4:81067313-81067332 | Msa0526940:CDS | 40.0% | |
| CTGTCTCAATCGCCAAAAAA+AGG | + | chr3_4:81067378-81067397 | None:intergenic | 40.0% | |
| !!! | AAATTTTTTCCCAAGGGTGC+TGG | - | chr3_4:81067511-81067530 | Msa0526940:five_prime_UTR | 40.0% |
| TATACACTTCCACTGTACAG+AGG | + | chr3_4:81067564-81067583 | None:intergenic | 40.0% | |
| CTGAAAGCCTTGACAAGTTA+TGG | + | chr3_4:81066365-81066384 | None:intergenic | 40.0% | |
| GGACAAGTTTGACATACACA+TGG | + | chr3_4:81066433-81066452 | None:intergenic | 40.0% | |
| !!! | GAAAGTTTTGAAGCTGATGG+TGG | - | chr3_4:81066456-81066475 | Msa0526940:intron | 40.0% |
| ! | GATGGTGAATTTTCTGCTGA+TGG | - | chr3_4:81066489-81066508 | Msa0526940:intron | 40.0% |
| GATGATCAGTTACTACAACC+AGG | - | chr3_4:81066516-81066535 | Msa0526940:intron | 40.0% | |
| ! | TGATTCATTTTCAGAGCCAG+AGG | + | chr3_4:81066547-81066566 | None:intergenic | 40.0% |
| !! | TCTGGCTCTGAAAATGAATC+AGG | - | chr3_4:81066546-81066565 | Msa0526940:intron | 40.0% |
| ACAAAGGAAAGTAGTTTGGG+AGG | - | chr3_4:81066675-81066694 | Msa0526940:CDS | 40.0% | |
| ATGGTGATTACTAGGCCTAA+AGG | - | chr3_4:81066852-81066871 | Msa0526940:CDS | 40.0% | |
| TGATTACTAGGCCTAAAGGT+GGG | - | chr3_4:81066856-81066875 | Msa0526940:CDS | 40.0% | |
| AAACTCCTATTCCCACCTTT+AGG | + | chr3_4:81066870-81066889 | None:intergenic | 40.0% | |
| TGGGAATAGGAGTTTGTGTA+TGG | - | chr3_4:81066875-81066894 | Msa0526940:CDS | 40.0% | |
| ACACTTGATACTAGTAGTGG+TGG | - | chr3_4:81066981-81067000 | Msa0526940:CDS | 40.0% | |
| GAGATTCGCCAATTAGCAAT+AGG | + | chr3_4:81067014-81067033 | None:intergenic | 40.0% | |
| ATTGCTAATTGGCGAATCTC+CGG | - | chr3_4:81067014-81067033 | Msa0526940:CDS | 40.0% | |
| AAATTGAGAATTACCGGGAC+CGG | + | chr3_4:81067036-81067055 | None:intergenic | 40.0% | |
| ! | GTCCCGGTAATTCTCAATTT+TGG | - | chr3_4:81067036-81067055 | Msa0526940:CDS | 40.0% |
| TGATGATCCAAGAGATGTGA+AGG | - | chr3_4:81067258-81067277 | Msa0526940:CDS | 40.0% | |
| ATAGCATCTGCCACCAAATA+CGG | - | chr3_4:81067313-81067332 | Msa0526940:CDS | 40.0% | |
| CTGTCTCAATCGCCAAAAAA+AGG | + | chr3_4:81067378-81067397 | None:intergenic | 40.0% | |
| !!! | AAATTTTTTCCCAAGGGTGC+TGG | - | chr3_4:81067511-81067530 | Msa0526940:five_prime_UTR | 40.0% |
| TATACACTTCCACTGTACAG+AGG | + | chr3_4:81067564-81067583 | None:intergenic | 40.0% | |
| TTCACTCCAACAACACTCAC+CGG | + | chr3_4:81066621-81066640 | None:intergenic | 45.0% | |
| AGGAAAGTAGTTTGGGAGGT+AGG | - | chr3_4:81066679-81066698 | Msa0526940:CDS | 45.0% | |
| ! | GAGAGAGTGATCAGAGTACT+GGG | - | chr3_4:81066826-81066845 | Msa0526940:CDS | 45.0% |
| !! | AGAGAGTGATCAGAGTACTG+GGG | - | chr3_4:81066827-81066846 | Msa0526940:CDS | 45.0% |
| GTGATTACTAGGCCTAAAGG+TGG | - | chr3_4:81066855-81066874 | Msa0526940:CDS | 45.0% | |
| !!! | CTGGATTTTCGGGTATGTGA+TGG | - | chr3_4:81067530-81067549 | Msa0526940:five_prime_UTR | 45.0% |
| ! | GTAGCTTTTCCTCTGTACAG+TGG | - | chr3_4:81067552-81067571 | Msa0526940:five_prime_UTR | 45.0% |
| TTCACTCCAACAACACTCAC+CGG | + | chr3_4:81066621-81066640 | None:intergenic | 45.0% | |
| AGGAAAGTAGTTTGGGAGGT+AGG | - | chr3_4:81066679-81066698 | Msa0526940:CDS | 45.0% | |
| ! | GAGAGAGTGATCAGAGTACT+GGG | - | chr3_4:81066826-81066845 | Msa0526940:CDS | 45.0% |
| !! | AGAGAGTGATCAGAGTACTG+GGG | - | chr3_4:81066827-81066846 | Msa0526940:CDS | 45.0% |
| GTGATTACTAGGCCTAAAGG+TGG | - | chr3_4:81066855-81066874 | Msa0526940:CDS | 45.0% | |
| !!! | CTGGATTTTCGGGTATGTGA+TGG | - | chr3_4:81067530-81067549 | Msa0526940:five_prime_UTR | 45.0% |
| ! | GTAGCTTTTCCTCTGTACAG+TGG | - | chr3_4:81067552-81067571 | Msa0526940:five_prime_UTR | 45.0% |
| ! | GATGGTGGTGATGAAGCAGA+TGG | - | chr3_4:81066471-81066490 | Msa0526940:intron | 50.0% |
| ! | AAGACGGAGGAGTTTGGTTC+CGG | - | chr3_4:81066599-81066618 | Msa0526940:intron | 50.0% |
| ! | TTGGTTCCGGTGAGTGTTGT+TGG | - | chr3_4:81066612-81066631 | Msa0526940:intron | 50.0% |
| GTTTGGGAGGTAGGAGAAGA+AGG | - | chr3_4:81066688-81066707 | Msa0526940:CDS | 50.0% | |
| GTAGGAGAAGAAGGAGGAGA+AGG | - | chr3_4:81066697-81066716 | Msa0526940:CDS | 50.0% | |
| GGAGAGAGTGATCAGAGTAC+TGG | - | chr3_4:81066825-81066844 | Msa0526940:CDS | 50.0% | |
| !! | TGATCAGAGTACTGGGGTGA+TGG | - | chr3_4:81066833-81066852 | Msa0526940:CDS | 50.0% |
| ! | CTGGGGTGATGGTGATTACT+AGG | - | chr3_4:81066844-81066863 | Msa0526940:CDS | 50.0% |
| CTAGGCCTAAAGGTGGGAAT+AGG | - | chr3_4:81066862-81066881 | Msa0526940:CDS | 50.0% | |
| AGTCGTGCCTTCACATCTCT+TGG | + | chr3_4:81067268-81067287 | None:intergenic | 50.0% | |
| ! | TGAAGGCACGACTCAAAGTG+TGG | - | chr3_4:81067275-81067294 | Msa0526940:CDS | 50.0% |
| ! | GAAGGCACGACTCAAAGTGT+GGG | - | chr3_4:81067276-81067295 | Msa0526940:CDS | 50.0% |
| GTGTCATGAGCCGTATTTGG+TGG | + | chr3_4:81067326-81067345 | None:intergenic | 50.0% | |
| ! | TGGGTGTCATGAGCCGTATT+TGG | + | chr3_4:81067329-81067348 | None:intergenic | 50.0% |
| !!! | TCCCAAGGGTGCTGGATTTT+CGG | - | chr3_4:81067519-81067538 | Msa0526940:five_prime_UTR | 50.0% |
| ! | GATGGTGGTGATGAAGCAGA+TGG | - | chr3_4:81066471-81066490 | Msa0526940:intron | 50.0% |
| ! | AAGACGGAGGAGTTTGGTTC+CGG | - | chr3_4:81066599-81066618 | Msa0526940:intron | 50.0% |
| ! | TTGGTTCCGGTGAGTGTTGT+TGG | - | chr3_4:81066612-81066631 | Msa0526940:intron | 50.0% |
| GTTTGGGAGGTAGGAGAAGA+AGG | - | chr3_4:81066688-81066707 | Msa0526940:CDS | 50.0% | |
| GTAGGAGAAGAAGGAGGAGA+AGG | - | chr3_4:81066697-81066716 | Msa0526940:CDS | 50.0% | |
| GGAGAGAGTGATCAGAGTAC+TGG | - | chr3_4:81066825-81066844 | Msa0526940:CDS | 50.0% | |
| !! | TGATCAGAGTACTGGGGTGA+TGG | - | chr3_4:81066833-81066852 | Msa0526940:CDS | 50.0% |
| ! | CTGGGGTGATGGTGATTACT+AGG | - | chr3_4:81066844-81066863 | Msa0526940:CDS | 50.0% |
| CTAGGCCTAAAGGTGGGAAT+AGG | - | chr3_4:81066862-81066881 | Msa0526940:CDS | 50.0% | |
| AGTCGTGCCTTCACATCTCT+TGG | + | chr3_4:81067268-81067287 | None:intergenic | 50.0% | |
| ! | TGAAGGCACGACTCAAAGTG+TGG | - | chr3_4:81067275-81067294 | Msa0526940:CDS | 50.0% |
| ! | GAAGGCACGACTCAAAGTGT+GGG | - | chr3_4:81067276-81067295 | Msa0526940:CDS | 50.0% |
| GTGTCATGAGCCGTATTTGG+TGG | + | chr3_4:81067326-81067345 | None:intergenic | 50.0% | |
| ! | TGGGTGTCATGAGCCGTATT+TGG | + | chr3_4:81067329-81067348 | None:intergenic | 50.0% |
| !!! | TCCCAAGGGTGCTGGATTTT+CGG | - | chr3_4:81067519-81067538 | Msa0526940:five_prime_UTR | 50.0% |
| CTACAACCAGGGTTGTCCTC+TGG | - | chr3_4:81066528-81066547 | Msa0526940:intron | 55.0% | |
| TACCGGTGACACCACCAAGA+CGG | - | chr3_4:81066583-81066602 | Msa0526940:intron | 55.0% | |
| ACCACCAAGACGGAGGAGTT+TGG | - | chr3_4:81066593-81066612 | Msa0526940:intron | 55.0% | |
| ACCAAACTCCTCCGTCTTGG+TGG | + | chr3_4:81066597-81066616 | None:intergenic | 55.0% | |
| GGAACCAAACTCCTCCGTCT+TGG | + | chr3_4:81066600-81066619 | None:intergenic | 55.0% | |
| TGGGAGGTAGGAGAAGAAGG+AGG | - | chr3_4:81066691-81066710 | Msa0526940:CDS | 55.0% | |
| AATTGGCGAATCTCCGGTCC+CGG | - | chr3_4:81067020-81067039 | Msa0526940:CDS | 55.0% | |
| ACGACTCAAAGTGTGGGCAC+AGG | - | chr3_4:81067282-81067301 | Msa0526940:CDS | 55.0% | |
| CCCGAAAATCCAGCACCCTT+GGG | + | chr3_4:81067523-81067542 | None:intergenic | 55.0% | |
| !!! | CCCAAGGGTGCTGGATTTTC+GGG | - | chr3_4:81067520-81067539 | Msa0526940:five_prime_UTR | 55.0% |
| ACCCGAAAATCCAGCACCCT+TGG | + | chr3_4:81067524-81067543 | None:intergenic | 55.0% | |
| CTACAACCAGGGTTGTCCTC+TGG | - | chr3_4:81066528-81066547 | Msa0526940:intron | 55.0% | |
| TACCGGTGACACCACCAAGA+CGG | - | chr3_4:81066583-81066602 | Msa0526940:intron | 55.0% | |
| ACCACCAAGACGGAGGAGTT+TGG | - | chr3_4:81066593-81066612 | Msa0526940:intron | 55.0% | |
| ACCAAACTCCTCCGTCTTGG+TGG | + | chr3_4:81066597-81066616 | None:intergenic | 55.0% | |
| GGAACCAAACTCCTCCGTCT+TGG | + | chr3_4:81066600-81066619 | None:intergenic | 55.0% | |
| TGGGAGGTAGGAGAAGAAGG+AGG | - | chr3_4:81066691-81066710 | Msa0526940:CDS | 55.0% | |
| AATTGGCGAATCTCCGGTCC+CGG | - | chr3_4:81067020-81067039 | Msa0526940:CDS | 55.0% | |
| ACGACTCAAAGTGTGGGCAC+AGG | - | chr3_4:81067282-81067301 | Msa0526940:CDS | 55.0% | |
| CCCGAAAATCCAGCACCCTT+GGG | + | chr3_4:81067523-81067542 | None:intergenic | 55.0% | |
| !!! | CCCAAGGGTGCTGGATTTTC+GGG | - | chr3_4:81067520-81067539 | Msa0526940:five_prime_UTR | 55.0% |
| ACCCGAAAATCCAGCACCCT+TGG | + | chr3_4:81067524-81067543 | None:intergenic | 55.0% | |
| TCAGAGCCAGAGGACAACCC+TGG | + | chr3_4:81066537-81066556 | None:intergenic | 60.0% | |
| !! | CTCCGTCTTGGTGGTGTCAC+CGG | + | chr3_4:81066588-81066607 | None:intergenic | 60.0% |
| TCAGAGCCAGAGGACAACCC+TGG | + | chr3_4:81066537-81066556 | None:intergenic | 60.0% | |
| !! | CTCCGTCTTGGTGGTGTCAC+CGG | + | chr3_4:81066588-81066607 | None:intergenic | 60.0% |
| CGGTGACACCACCAAGACGG+AGG | - | chr3_4:81066586-81066605 | Msa0526940:intron | 65.0% | |
| CGGTGACACCACCAAGACGG+AGG | - | chr3_4:81066586-81066605 | Msa0526940:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 81066060 | 81067634 | 81066060 | ID=Msa0526940;Name=Msa0526940 |
| chr3_4 | mRNA | 81066060 | 81067634 | 81066060 | ID=Msa0526940-mRNA-1;Parent=Msa0526940;Name=Msa0526940-mRNA-1;_AED=0.05;_eAED=0.05;_QI=198|1|1|1|1|1|2|292|289 |
| chr3_4 | exon | 81066060 | 81066437 | 81066060 | ID=Msa0526940-mRNA-1:exon:24429;Parent=Msa0526940-mRNA-1 |
| chr3_4 | exon | 81066653 | 81067634 | 81066653 | ID=Msa0526940-mRNA-1:exon:24428;Parent=Msa0526940-mRNA-1 |
| chr3_4 | five_prime_UTR | 81067437 | 81067634 | 81067437 | ID=Msa0526940-mRNA-1:five_prime_utr;Parent=Msa0526940-mRNA-1 |
| chr3_4 | CDS | 81066653 | 81067436 | 81066653 | ID=Msa0526940-mRNA-1:cds;Parent=Msa0526940-mRNA-1 |
| chr3_4 | CDS | 81066352 | 81066437 | 81066352 | ID=Msa0526940-mRNA-1:cds;Parent=Msa0526940-mRNA-1 |
| chr3_4 | three_prime_UTR | 81066060 | 81066351 | 81066060 | ID=Msa0526940-mRNA-1:three_prime_utr;Parent=Msa0526940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
