Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1171630 | XP_013460699.1 | 97.125 | 313 | 4 | 3 | 1 | 308 | 1 | 313 | 0.0 | 596 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1171630 | sp|Q9M2S3|AHL15_ARATH | 52.647 | 340 | 99 | 10 | 1 | 308 | 1 | 310 | 2.95e-79 | 246 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1171630 | A0A072V017 | 97.125 | 313 | 4 | 3 | 1 | 308 | 1 | 313 | 0.0 | 596 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005690 | Msa1171630 | -0.820283 | 7.443014e-53 | -8.615850e-47 |
| Msa0021980 | Msa1171630 | -0.803048 | 4.198430e-49 | -8.615850e-47 |
| Msa0025690 | Msa1171630 | -0.803049 | 4.196799e-49 | -8.615850e-47 |
| Msa0034100 | Msa1171630 | -0.825204 | 5.324710e-54 | -8.615850e-47 |
| Msa0036560 | Msa1171630 | -0.806253 | 8.996772e-50 | -8.615850e-47 |
| Msa0043840 | Msa1171630 | 0.831730 | 1.414300e-55 | -8.615850e-47 |
| Msa0050320 | Msa1171630 | -0.801520 | 8.660946e-49 | -8.615850e-47 |
| Msa0053480 | Msa1171630 | -0.801324 | 9.502025e-49 | -8.615850e-47 |
| Msa0053960 | Msa1171630 | -0.803554 | 3.297824e-49 | -8.615850e-47 |
| Msa0054760 | Msa1171630 | -0.813652 | 2.296481e-51 | -8.615850e-47 |
| Msa0059880 | Msa1171630 | 0.801084 | 1.063789e-48 | -8.615850e-47 |
| Msa0081840 | Msa1171630 | -0.809735 | 1.633996e-50 | -8.615850e-47 |
| Msa0087130 | Msa1171630 | -0.807602 | 4.664680e-50 | -8.615850e-47 |
| Msa0090350 | Msa1171630 | -0.801034 | 1.089122e-48 | -8.615850e-47 |
| Msa0090500 | Msa1171630 | 0.828723 | 7.672644e-55 | -8.615850e-47 |
| Msa0094240 | Msa1171630 | -0.801113 | 1.049640e-48 | -8.615850e-47 |
| Msa0096510 | Msa1171630 | -0.821957 | 3.063217e-53 | -8.615850e-47 |
| Msa0099090 | Msa1171630 | -0.806465 | 8.118725e-50 | -8.615850e-47 |
| Msa0117300 | Msa1171630 | -0.837254 | 5.791922e-57 | -8.615850e-47 |
| Msa0120320 | Msa1171630 | -0.806687 | 7.287409e-50 | -8.615850e-47 |
| Msa0607620 | Msa1171630 | -0.800324 | 1.520479e-48 | -8.615850e-47 |
| Msa0608940 | Msa1171630 | -0.827946 | 1.181289e-54 | -8.615850e-47 |
| Msa0615430 | Msa1171630 | -0.802756 | 4.822662e-49 | -8.615850e-47 |
| Msa0639030 | Msa1171630 | -0.803000 | 4.294765e-49 | -8.615850e-47 |
| Msa0649530 | Msa1171630 | -0.833609 | 4.833582e-56 | -8.615850e-47 |
| Msa0654880 | Msa1171630 | -0.810291 | 1.239838e-50 | -8.615850e-47 |
| Msa0690580 | Msa1171630 | -0.802227 | 6.200793e-49 | -8.615850e-47 |
| Msa0691740 | Msa1171630 | -0.819584 | 1.075511e-52 | -8.615850e-47 |
| Msa0697600 | Msa1171630 | -0.821387 | 4.147895e-53 | -8.615850e-47 |
| Msa0698480 | Msa1171630 | -0.816916 | 4.320693e-52 | -8.615850e-47 |
| Msa0698650 | Msa1171630 | -0.822299 | 2.551486e-53 | -8.615850e-47 |
| Msa0705050 | Msa1171630 | -0.813033 | 3.141888e-51 | -8.615850e-47 |
| Msa0714060 | Msa1171630 | -0.801145 | 1.033748e-48 | -8.615850e-47 |
| Msa0714200 | Msa1171630 | -0.804412 | 2.187625e-49 | -8.615850e-47 |
| Msa0735340 | Msa1171630 | 0.804192 | 2.430888e-49 | -8.615850e-47 |
| Msa0748980 | Msa1171630 | -0.827405 | 1.593254e-54 | -8.615850e-47 |
| Msa0756440 | Msa1171630 | -0.815672 | 8.198027e-52 | -8.615850e-47 |
| Msa0774360 | Msa1171630 | -0.805043 | 1.614915e-49 | -8.615850e-47 |
| Msa0774560 | Msa1171630 | -0.804562 | 2.035620e-49 | -8.615850e-47 |
| Msa0797980 | Msa1171630 | -0.806896 | 6.582544e-50 | -8.615850e-47 |
| Msa0813630 | Msa1171630 | -0.828407 | 9.146079e-55 | -8.615850e-47 |
| Msa0825520 | Msa1171630 | -0.820782 | 5.718063e-53 | -8.615850e-47 |
| Msa0835550 | Msa1171630 | -0.825864 | 3.714852e-54 | -8.615850e-47 |
| Msa0121460 | Msa1171630 | -0.806126 | 9.569134e-50 | -8.615850e-47 |
| Msa0128070 | Msa1171630 | -0.800418 | 1.454605e-48 | -8.615850e-47 |
| Msa0128110 | Msa1171630 | -0.822115 | 2.814817e-53 | -8.615850e-47 |
| Msa0128340 | Msa1171630 | 0.806162 | 9.404399e-50 | -8.615850e-47 |
| Msa0128740 | Msa1171630 | 0.803087 | 4.121324e-49 | -8.615850e-47 |
| Msa0131090 | Msa1171630 | -0.855460 | 6.216534e-62 | -8.615850e-47 |
| Msa0137970 | Msa1171630 | 0.824538 | 7.646907e-54 | -8.615850e-47 |
| Msa0139280 | Msa1171630 | -0.820865 | 5.473645e-53 | -8.615850e-47 |
| Msa0148430 | Msa1171630 | -0.811570 | 6.554422e-51 | -8.615850e-47 |
| Msa0150910 | Msa1171630 | 0.800030 | 1.744595e-48 | -8.615850e-47 |
| Msa0154720 | Msa1171630 | -0.803475 | 3.425572e-49 | -8.615850e-47 |
| Msa0160650 | Msa1171630 | -0.814445 | 1.534952e-51 | -8.615850e-47 |
| Msa0173260 | Msa1171630 | 0.818070 | 2.374084e-52 | -8.615850e-47 |
| Msa0176610 | Msa1171630 | -0.813196 | 2.892486e-51 | -8.615850e-47 |
| Msa0183920 | Msa1171630 | 0.833309 | 5.742302e-56 | -8.615850e-47 |
| Msa0184030 | Msa1171630 | -0.810535 | 1.098390e-50 | -8.615850e-47 |
| Msa0223050 | Msa1171630 | 0.830025 | 3.705142e-55 | -8.615850e-47 |
| Msa0230980 | Msa1171630 | -0.801200 | 1.007412e-48 | -8.615850e-47 |
| Msa0238420 | Msa1171630 | 0.804870 | 1.755315e-49 | -8.615850e-47 |
| Msa0372990 | Msa1171630 | -0.819010 | 1.453559e-52 | -8.615850e-47 |
| Msa0375500 | Msa1171630 | 0.820865 | 5.473645e-53 | -8.615850e-47 |
| Msa0408160 | Msa1171630 | -0.804529 | 2.068175e-49 | -8.615850e-47 |
| Msa0421390 | Msa1171630 | -0.814136 | 1.796036e-51 | -8.615850e-47 |
| Msa0424300 | Msa1171630 | 0.809352 | 1.974591e-50 | -8.615850e-47 |
| Msa0431940 | Msa1171630 | -0.821841 | 3.257663e-53 | -8.615850e-47 |
| Msa0436600 | Msa1171630 | -0.803433 | 3.494212e-49 | -8.615850e-47 |
| Msa0471210 | Msa1171630 | 0.834629 | 2.683252e-56 | -8.615850e-47 |
| Msa0481050 | Msa1171630 | -0.805465 | 1.317611e-49 | -8.615850e-47 |
| Msa0984820 | Msa1171630 | -0.816382 | 5.691389e-52 | -8.615850e-47 |
| Msa0984840 | Msa1171630 | -0.811463 | 6.913961e-51 | -8.615850e-47 |
| Msa0985040 | Msa1171630 | -0.805166 | 1.522181e-49 | -8.615850e-47 |
| Msa0999480 | Msa1171630 | -0.812703 | 3.710126e-51 | -8.615850e-47 |
| Msa1028720 | Msa1171630 | -0.811522 | 6.713632e-51 | -8.615850e-47 |
| Msa1031530 | Msa1171630 | -0.837034 | 6.593261e-57 | -8.615850e-47 |
| Msa1040730 | Msa1171630 | 0.802916 | 4.469436e-49 | -8.615850e-47 |
| Msa1050320 | Msa1171630 | -0.813401 | 2.607610e-51 | -8.615850e-47 |
| Msa1061760 | Msa1171630 | 0.812317 | 4.505234e-51 | -8.615850e-47 |
| Msa1069440 | Msa1171630 | -0.804503 | 2.093434e-49 | -8.615850e-47 |
| Msa1070630 | Msa1171630 | -0.801111 | 1.050248e-48 | -8.615850e-47 |
| Msa1072640 | Msa1171630 | -0.806117 | 9.612533e-50 | -8.615850e-47 |
| Msa1085560 | Msa1171630 | 0.808908 | 2.457923e-50 | -8.615850e-47 |
| Msa1098470 | Msa1171630 | -0.803550 | 3.304720e-49 | -8.615850e-47 |
| Msa1101300 | Msa1171630 | -0.807519 | 4.858920e-50 | -8.615850e-47 |
| Msa0239610 | Msa1171630 | -0.828306 | 9.676357e-55 | -8.615850e-47 |
| Msa0251140 | Msa1171630 | -0.803681 | 3.103599e-49 | -8.615850e-47 |
| Msa0266380 | Msa1171630 | -0.806566 | 7.728841e-50 | -8.615850e-47 |
| Msa0269660 | Msa1171630 | -0.800913 | 1.152876e-48 | -8.615850e-47 |
| Msa0302220 | Msa1171630 | 0.817586 | 3.053673e-52 | -8.615850e-47 |
| Msa0314980 | Msa1171630 | -0.811609 | 6.426676e-51 | -8.615850e-47 |
| Msa0330770 | Msa1171630 | -0.804190 | 2.432578e-49 | -8.615850e-47 |
| Msa0339540 | Msa1171630 | 0.835492 | 1.626055e-56 | -8.615850e-47 |
| Msa0341860 | Msa1171630 | -0.813587 | 2.373978e-51 | -8.615850e-47 |
| Msa1107330 | Msa1171630 | 0.821283 | 4.384401e-53 | -8.615850e-47 |
| Msa1113210 | Msa1171630 | -0.801729 | 7.849027e-49 | -8.615850e-47 |
| Msa1134740 | Msa1171630 | 0.814982 | 1.167146e-51 | -8.615850e-47 |
| Msa1145070 | Msa1171630 | -0.812440 | 4.235420e-51 | -8.615850e-47 |
| Msa1150860 | Msa1171630 | 0.811073 | 8.401146e-51 | -8.615850e-47 |
| Msa1157310 | Msa1171630 | -0.803346 | 3.642542e-49 | -8.615850e-47 |
| Msa1158450 | Msa1171630 | -0.809608 | 1.739286e-50 | -8.615850e-47 |
| Msa1158650 | Msa1171630 | -0.802350 | 5.850138e-49 | -8.615850e-47 |
| Msa1171630 | Msa1181730 | -0.804496 | 2.100708e-49 | -8.615850e-47 |
| Msa1171630 | Msa1182400 | -0.841787 | 3.843360e-58 | -8.615850e-47 |
| Msa1171630 | Msa1193430 | -0.802570 | 5.268762e-49 | -8.615850e-47 |
| Msa1171630 | Msa1194170 | 0.843652 | 1.228217e-58 | -8.615850e-47 |
| Msa1171630 | Msa1194680 | -0.810286 | 1.243324e-50 | -8.615850e-47 |
| Msa1171630 | Msa1199750 | -0.827903 | 1.209494e-54 | -8.615850e-47 |
| Msa1171630 | Msa1214960 | 0.800984 | 1.114920e-48 | -8.615850e-47 |
| Msa1171630 | Msa1216700 | -0.800428 | 1.447701e-48 | -8.615850e-47 |
| Msa1171630 | Msa1221540 | -0.811014 | 8.652963e-51 | -8.615850e-47 |
| Msa1171630 | Msa1230190 | -0.845158 | 4.835626e-59 | -8.615850e-47 |
| Msa1171630 | Msa1237260 | -0.809288 | 2.037669e-50 | -8.615850e-47 |
| Msa1171630 | Msa1242990 | -0.809700 | 1.662449e-50 | -8.615850e-47 |
| Msa1171630 | Msa1249410 | -0.811037 | 8.552240e-51 | -8.615850e-47 |
| Msa1171630 | Msa1259560 | 0.844505 | 7.253645e-59 | -8.615850e-47 |
| Msa1171630 | Msa1272770 | -0.845367 | 4.245220e-59 | -8.615850e-47 |
| Msa1171630 | Msa1278420 | -0.804528 | 2.069081e-49 | -8.615850e-47 |
| Msa1171630 | Msa1279320 | -0.813335 | 2.695951e-51 | -8.615850e-47 |
| Msa1171630 | Msa1286950 | -0.822870 | 1.879226e-53 | -8.615850e-47 |
| Msa1171630 | Msa1289990 | -0.804601 | 1.997549e-49 | -8.615850e-47 |
| Msa1171630 | Msa1295220 | -0.814265 | 1.682570e-51 | -8.615850e-47 |
| Msa1171630 | Msa1299280 | 0.832032 | 1.191573e-55 | -8.615850e-47 |
| Msa1171630 | Msa1303130 | -0.803951 | 2.728138e-49 | -8.615850e-47 |
| Msa1171630 | Msa1319230 | -0.823000 | 1.752669e-53 | -8.615850e-47 |
| Msa1171630 | Msa1328600 | -0.822033 | 2.941005e-53 | -8.615850e-47 |
| Msa1171630 | Msa1334020 | -0.813757 | 2.177514e-51 | -8.615850e-47 |
| Msa1171630 | Msa1339310 | -0.807747 | 4.345673e-50 | -8.615850e-47 |
| Msa1171630 | Msa1345390 | 0.808568 | 2.905403e-50 | -8.615850e-47 |
| Msa1171630 | Msa1356730 | -0.813637 | 2.314721e-51 | -8.615850e-47 |
| Msa1171630 | Msa1368660 | -0.820967 | 5.185626e-53 | -8.615850e-47 |
| Msa1171630 | Msa1371060 | -0.818731 | 1.682041e-52 | -8.615850e-47 |
| Msa1171630 | Msa1377460 | 0.801720 | 7.879808e-49 | -8.615850e-47 |
| Msa1171630 | Msa1384620 | -0.821147 | 4.711675e-53 | -8.615850e-47 |
| Msa1171630 | Msa1384980 | -0.838060 | 3.598372e-57 | -8.615850e-47 |
| Msa1171630 | Msa1388270 | -0.806250 | 9.010522e-50 | -8.615850e-47 |
| Msa1171630 | Msa1395700 | -0.823643 | 1.240350e-53 | -8.615850e-47 |
| Msa1171630 | Msa1399700 | -0.813686 | 2.257960e-51 | -8.615850e-47 |
| Msa1171630 | Msa1402000 | 0.834464 | 2.953089e-56 | -8.615850e-47 |
| Msa1171630 | Msa1409060 | 0.823226 | 1.552397e-53 | -8.615850e-47 |
| Msa1171630 | Msa1413900 | -0.806382 | 8.451697e-50 | -8.615850e-47 |
| Msa1171630 | Msa1431240 | -0.819188 | 1.324068e-52 | -8.615850e-47 |
| Msa1171630 | Msa1431870 | -0.803512 | 3.364455e-49 | -8.615850e-47 |
| Msa1171630 | Msa1432250 | -0.845616 | 3.633592e-59 | -8.615850e-47 |
| Msa1171630 | Msa1434700 | 0.810151 | 1.329384e-50 | -8.615850e-47 |
| Msa1171630 | Msa1450850 | -0.853227 | 2.747564e-61 | -8.615850e-47 |
| Msa1171630 | Msa1451780 | -0.829802 | 4.197978e-55 | -8.615850e-47 |
| Msa1171630 | Msa1458370 | 0.893985 | 3.772858e-75 | -8.615850e-47 |
| Msa1171630 | Msa1459630 | -0.830745 | 2.469953e-55 | -8.615850e-47 |
| Msa1171630 | Msa1460530 | -0.830191 | 3.374723e-55 | -8.615850e-47 |
| Msa1171630 | Msa1463500 | -0.824802 | 6.626620e-54 | -8.615850e-47 |
| Msa0488900 | Msa1171630 | -0.813365 | 2.656389e-51 | -8.615850e-47 |
| Msa0500490 | Msa1171630 | -0.800223 | 1.593995e-48 | -8.615850e-47 |
| Msa0515930 | Msa1171630 | 0.812749 | 3.624728e-51 | -8.615850e-47 |
| Msa0520810 | Msa1171630 | -0.811388 | 7.179477e-51 | -8.615850e-47 |
| Msa0555510 | Msa1171630 | -0.816388 | 5.675117e-52 | -8.615850e-47 |
| Msa0560370 | Msa1171630 | -0.833896 | 4.099070e-56 | -8.615850e-47 |
| Msa0561420 | Msa1171630 | -0.807161 | 5.786644e-50 | -8.615850e-47 |
| Msa0575950 | Msa1171630 | 0.823398 | 1.415158e-53 | -8.615850e-47 |
| Msa0579170 | Msa1171630 | -0.819084 | 1.398596e-52 | -8.615850e-47 |
| Msa0579230 | Msa1171630 | -0.817847 | 2.666021e-52 | -8.615850e-47 |
| Msa0849290 | Msa1171630 | -0.812614 | 3.880996e-51 | -8.615850e-47 |
| Msa0852090 | Msa1171630 | -0.806816 | 6.845941e-50 | -8.615850e-47 |
| Msa0861480 | Msa1171630 | -0.818123 | 2.310345e-52 | -8.615850e-47 |
| Msa0861560 | Msa1171630 | -0.804501 | 2.095968e-49 | -8.615850e-47 |
| Msa0864730 | Msa1171630 | -0.825693 | 4.079297e-54 | -8.615850e-47 |
| Msa0864750 | Msa1171630 | -0.825674 | 4.120179e-54 | -8.615850e-47 |
| Msa0868040 | Msa1171630 | -0.822012 | 2.974313e-53 | -8.615850e-47 |
| Msa0884840 | Msa1171630 | -0.808691 | 2.734653e-50 | -8.615850e-47 |
| Msa0887000 | Msa1171630 | -0.804972 | 1.671297e-49 | -8.615850e-47 |
| Msa0917630 | Msa1171630 | -0.802089 | 6.618044e-49 | -8.615850e-47 |
| Msa0927890 | Msa1171630 | -0.801686 | 8.009789e-49 | -8.615850e-47 |
| Msa0931370 | Msa1171630 | 0.828091 | 1.089737e-54 | -8.615850e-47 |
| Msa0967260 | Msa1171630 | -0.800737 | 1.252496e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1171630 | MtrunA17_Chr3g0112131 | 97.125 | 313 | 4 | 3 | 1 | 308 | 1 | 313 | 0.0 | 596 |
| Msa1171630 | MtrunA17_Chr1g0168121 | 64.681 | 235 | 80 | 1 | 74 | 305 | 40 | 274 | 6.32e-81 | 246 |
| Msa1171630 | MtrunA17_Chr5g0443311 | 52.232 | 224 | 84 | 2 | 76 | 299 | 51 | 251 | 2.23e-69 | 216 |
| Msa1171630 | MtrunA17_Chr1g0190051 | 51.136 | 264 | 119 | 3 | 1 | 257 | 1 | 261 | 2.57e-69 | 218 |
| Msa1171630 | MtrunA17_Chr8g0351651 | 57.727 | 220 | 76 | 1 | 27 | 229 | 20 | 239 | 2.72e-67 | 213 |
| Msa1171630 | MtrunA17_Chr5g0435681 | 47.401 | 327 | 146 | 6 | 1 | 302 | 1 | 326 | 4.39e-66 | 210 |
| Msa1171630 | MtrunA17_Chr5g0398531 | 61.780 | 191 | 61 | 1 | 52 | 230 | 64 | 254 | 2.57e-65 | 208 |
| Msa1171630 | MtrunA17_Chr7g0250031 | 67.516 | 157 | 45 | 1 | 85 | 241 | 66 | 216 | 1.07e-61 | 197 |
| Msa1171630 | MtrunA17_Chr4g0054651 | 53.226 | 248 | 101 | 4 | 53 | 298 | 51 | 285 | 1.67e-60 | 194 |
| Msa1171630 | MtrunA17_Chr3g0133051 | 44.030 | 268 | 112 | 10 | 57 | 308 | 45 | 290 | 8.14e-58 | 187 |
| Msa1171630 | MtrunA17_Chr5g0427311 | 51.163 | 172 | 74 | 4 | 85 | 246 | 60 | 231 | 1.49e-44 | 152 |
| Msa1171630 | MtrunA17_Chr1g0186441 | 46.053 | 152 | 36 | 1 | 74 | 225 | 63 | 168 | 2.17e-35 | 128 |
| Msa1171630 | MtrunA17_Chr3g0094471 | 35.023 | 217 | 111 | 4 | 32 | 222 | 15 | 227 | 8.65e-32 | 120 |
| Msa1171630 | MtrunA17_Chr5g0441851 | 37.423 | 163 | 91 | 2 | 72 | 223 | 73 | 235 | 7.34e-30 | 113 |
| Msa1171630 | MtrunA17_Chr5g0397551 | 36.416 | 173 | 103 | 4 | 76 | 242 | 104 | 275 | 7.25e-24 | 99.4 |
| Msa1171630 | MtrunA17_Chr6g0476061 | 43.966 | 116 | 62 | 1 | 103 | 215 | 130 | 245 | 1.87e-23 | 98.2 |
| Msa1171630 | MtrunA17_Chr5g0441901 | 36.646 | 161 | 92 | 3 | 68 | 219 | 67 | 226 | 2.25e-23 | 95.9 |
| Msa1171630 | MtrunA17_Chr1g0186461 | 44.375 | 160 | 40 | 5 | 67 | 225 | 42 | 153 | 2.92e-23 | 94.4 |
| Msa1171630 | MtrunA17_Chr4g0028181 | 33.929 | 168 | 99 | 4 | 68 | 225 | 45 | 210 | 3.16e-23 | 96.7 |
| Msa1171630 | MtrunA17_Chr1g0179461 | 42.982 | 114 | 61 | 2 | 106 | 215 | 148 | 261 | 9.74e-23 | 97.1 |
| Msa1171630 | MtrunA17_Chr1g0190011 | 42.857 | 112 | 63 | 1 | 106 | 216 | 112 | 223 | 1.79e-22 | 95.5 |
| Msa1171630 | MtrunA17_Chr1g0161621 | 32.530 | 166 | 96 | 5 | 72 | 223 | 97 | 260 | 1.43e-21 | 92.4 |
| Msa1171630 | MtrunA17_Chr1g0175001 | 32.515 | 163 | 101 | 2 | 72 | 225 | 81 | 243 | 1.54e-21 | 92.0 |
| Msa1171630 | MtrunA17_Chr4g0028211 | 33.333 | 162 | 98 | 3 | 72 | 223 | 32 | 193 | 2.14e-21 | 90.9 |
| Msa1171630 | MtrunA17_Chr5g0441441 | 34.177 | 158 | 88 | 2 | 76 | 222 | 50 | 202 | 3.43e-21 | 90.1 |
| Msa1171630 | MtrunA17_Chr7g0247431 | 38.514 | 148 | 85 | 2 | 74 | 215 | 125 | 272 | 6.36e-20 | 88.6 |
| Msa1171630 | MtrunA17_Chr8g0386741 | 36.496 | 137 | 83 | 3 | 95 | 228 | 158 | 293 | 7.47e-19 | 85.9 |
| Msa1171630 | MtrunA17_Chr1g0188211 | 43.966 | 116 | 61 | 2 | 103 | 215 | 134 | 248 | 8.00e-19 | 85.5 |
| Msa1171630 | MtrunA17_Chr8g0351761 | 36.943 | 157 | 83 | 3 | 106 | 258 | 145 | 289 | 8.77e-19 | 85.5 |
| Msa1171630 | MtrunA17_Chr4g0054661 | 32.536 | 209 | 112 | 6 | 19 | 215 | 65 | 256 | 1.19e-18 | 85.1 |
| Msa1171630 | MtrunA17_Chr7g0274821 | 42.982 | 114 | 63 | 2 | 103 | 215 | 143 | 255 | 2.32e-18 | 84.3 |
| Msa1171630 | MtrunA17_Chr7g0245841 | 43.363 | 113 | 61 | 1 | 106 | 215 | 130 | 242 | 1.70e-17 | 81.6 |
| Msa1171630 | MtrunA17_Chr8g0349091 | 41.096 | 146 | 80 | 3 | 76 | 215 | 125 | 270 | 2.11e-17 | 81.6 |
| Msa1171630 | MtrunA17_Chr5g0398621 | 35.115 | 131 | 71 | 3 | 106 | 229 | 100 | 223 | 6.91e-17 | 78.6 |
| Msa1171630 | MtrunA17_Chr8g0374021 | 35.714 | 126 | 71 | 3 | 107 | 223 | 5 | 129 | 3.26e-16 | 74.7 |
| Msa1171630 | MtrunA17_Chr4g0034501 | 36.634 | 101 | 64 | 0 | 70 | 170 | 28 | 128 | 4.93e-16 | 74.7 |
| Msa1171630 | MtrunA17_Chr4g0027371 | 41.176 | 119 | 58 | 3 | 106 | 215 | 22 | 137 | 2.47e-15 | 74.3 |
| Msa1171630 | MtrunA17_Chr4g0056761 | 42.982 | 114 | 61 | 1 | 106 | 215 | 147 | 260 | 9.46e-15 | 73.6 |
| Msa1171630 | MtrunA17_Chr6g0476241 | 40.541 | 111 | 64 | 2 | 106 | 216 | 180 | 288 | 1.41e-14 | 72.8 |
| Msa1171630 | MtrunA17_Chr4g0027351 | 40.187 | 107 | 62 | 2 | 106 | 210 | 22 | 128 | 8.48e-13 | 64.7 |
| Msa1171630 | MtrunA17_Chr4g0027331 | 38.889 | 108 | 60 | 2 | 106 | 207 | 22 | 129 | 5.14e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1171630 | AT3G55560.1 | 52.647 | 340 | 99 | 10 | 1 | 308 | 1 | 310 | 2.99e-80 | 246 |
| Msa1171630 | AT4G14465.1 | 62.613 | 222 | 66 | 3 | 76 | 296 | 67 | 272 | 1.12e-75 | 233 |
| Msa1171630 | AT1G76500.1 | 60.541 | 185 | 63 | 2 | 52 | 227 | 49 | 232 | 3.50e-69 | 218 |
| Msa1171630 | AT2G42940.1 | 49.778 | 225 | 86 | 3 | 75 | 299 | 52 | 249 | 1.13e-64 | 204 |
| Msa1171630 | AT2G45430.1 | 56.170 | 235 | 87 | 6 | 76 | 302 | 89 | 315 | 7.99e-64 | 204 |
| Msa1171630 | AT3G04570.1 | 53.279 | 244 | 88 | 5 | 1 | 225 | 1 | 237 | 1.60e-63 | 203 |
| Msa1171630 | AT3G60870.1 | 52.423 | 227 | 86 | 4 | 76 | 302 | 59 | 263 | 2.96e-63 | 201 |
| Msa1171630 | AT2G35270.1 | 65.584 | 154 | 53 | 0 | 76 | 229 | 78 | 231 | 1.11e-62 | 200 |
| Msa1171630 | AT4G22810.1 | 70.064 | 157 | 44 | 1 | 76 | 229 | 105 | 261 | 7.44e-59 | 191 |
| Msa1171630 | AT4G12050.1 | 69.677 | 155 | 46 | 1 | 76 | 229 | 118 | 272 | 2.06e-58 | 191 |
| Msa1171630 | AT4G35390.1 | 59.296 | 199 | 79 | 1 | 27 | 223 | 14 | 212 | 3.98e-56 | 184 |
| Msa1171630 | AT5G49700.1 | 51.010 | 198 | 74 | 3 | 76 | 250 | 56 | 253 | 5.58e-56 | 182 |
| Msa1171630 | AT4G17800.1 | 66.207 | 145 | 49 | 0 | 85 | 229 | 91 | 235 | 2.41e-55 | 181 |
| Msa1171630 | AT1G20900.1 | 58.730 | 189 | 69 | 1 | 46 | 225 | 56 | 244 | 2.61e-53 | 177 |
| Msa1171630 | AT1G14490.2 | 50.877 | 171 | 75 | 3 | 66 | 229 | 14 | 182 | 1.32e-42 | 146 |
| Msa1171630 | AT1G14490.1 | 52.500 | 160 | 67 | 3 | 77 | 229 | 6 | 163 | 2.64e-42 | 145 |
| Msa1171630 | AT2G33620.1 | 43.243 | 148 | 80 | 3 | 71 | 215 | 132 | 278 | 7.56e-25 | 102 |
| Msa1171630 | AT2G33620.4 | 43.243 | 148 | 80 | 3 | 71 | 215 | 132 | 278 | 7.56e-25 | 102 |
| Msa1171630 | AT2G33620.2 | 43.243 | 148 | 80 | 3 | 71 | 215 | 132 | 278 | 7.56e-25 | 102 |
| Msa1171630 | AT2G33620.3 | 43.243 | 148 | 80 | 3 | 71 | 215 | 132 | 278 | 7.56e-25 | 102 |
| Msa1171630 | AT4G12080.1 | 44.538 | 119 | 59 | 2 | 106 | 219 | 173 | 289 | 1.14e-24 | 102 |
| Msa1171630 | AT4G25320.1 | 45.133 | 113 | 59 | 1 | 106 | 215 | 169 | 281 | 1.84e-23 | 99.8 |
| Msa1171630 | AT4G17950.1 | 42.759 | 145 | 76 | 3 | 76 | 215 | 196 | 338 | 2.00e-23 | 100 |
| Msa1171630 | AT5G51590.1 | 44.348 | 115 | 57 | 2 | 106 | 215 | 181 | 293 | 3.56e-23 | 99.0 |
| Msa1171630 | AT5G62260.2 | 38.710 | 124 | 73 | 1 | 103 | 223 | 160 | 283 | 6.17e-23 | 96.7 |
| Msa1171630 | AT2G45850.1 | 41.096 | 146 | 80 | 3 | 76 | 215 | 132 | 277 | 7.08e-23 | 97.4 |
| Msa1171630 | AT2G45850.2 | 41.096 | 146 | 80 | 3 | 76 | 215 | 132 | 277 | 7.08e-23 | 97.4 |
| Msa1171630 | AT1G63470.1 | 37.415 | 147 | 85 | 3 | 76 | 216 | 147 | 292 | 1.76e-22 | 96.7 |
| Msa1171630 | AT3G04590.1 | 42.727 | 110 | 63 | 0 | 106 | 215 | 174 | 283 | 2.96e-22 | 95.1 |
| Msa1171630 | AT3G04590.2 | 42.727 | 110 | 63 | 0 | 106 | 215 | 174 | 283 | 3.88e-22 | 96.3 |
| Msa1171630 | AT5G62260.1 | 39.655 | 116 | 67 | 1 | 103 | 215 | 160 | 275 | 7.70e-22 | 95.1 |
| Msa1171630 | AT5G62260.3 | 39.655 | 116 | 67 | 1 | 103 | 215 | 160 | 275 | 7.70e-22 | 95.1 |
| Msa1171630 | AT2G45850.3 | 40.136 | 147 | 82 | 3 | 76 | 216 | 132 | 278 | 3.45e-21 | 91.7 |
| Msa1171630 | AT4G00200.2 | 43.103 | 116 | 63 | 1 | 106 | 218 | 126 | 241 | 8.30e-18 | 82.8 |
| Msa1171630 | AT4G00200.1 | 43.103 | 116 | 63 | 1 | 106 | 218 | 126 | 241 | 8.30e-18 | 82.8 |
| Msa1171630 | AT4G22770.2 | 43.333 | 120 | 65 | 1 | 106 | 222 | 153 | 272 | 1.75e-17 | 82.0 |
| Msa1171630 | AT4G22770.1 | 43.333 | 120 | 65 | 1 | 106 | 222 | 153 | 272 | 1.75e-17 | 82.0 |
| Msa1171630 | AT5G46640.1 | 40.972 | 144 | 80 | 2 | 76 | 216 | 155 | 296 | 1.68e-16 | 79.7 |
| Msa1171630 | AT1G63480.2 | 32.051 | 156 | 94 | 4 | 66 | 215 | 125 | 274 | 1.94e-16 | 79.3 |
| Msa1171630 | AT1G63480.1 | 32.051 | 156 | 94 | 4 | 66 | 215 | 125 | 274 | 1.94e-16 | 79.3 |
| Msa1171630 | AT3G61310.1 | 36.986 | 146 | 86 | 2 | 76 | 215 | 134 | 279 | 2.16e-16 | 79.0 |
| Msa1171630 | AT1G63480.5 | 32.051 | 156 | 94 | 4 | 66 | 215 | 119 | 268 | 2.37e-16 | 79.0 |
| Msa1171630 | AT1G63480.7 | 32.051 | 156 | 94 | 4 | 66 | 215 | 119 | 268 | 2.37e-16 | 79.0 |
| Msa1171630 | AT1G63480.4 | 32.051 | 156 | 94 | 4 | 66 | 215 | 119 | 268 | 2.37e-16 | 79.0 |
| Msa1171630 | AT1G63480.3 | 32.051 | 156 | 94 | 4 | 66 | 215 | 119 | 268 | 2.37e-16 | 79.0 |
| Msa1171630 | AT1G63480.6 | 32.051 | 156 | 94 | 4 | 66 | 215 | 119 | 268 | 2.37e-16 | 79.0 |
| Msa1171630 | AT2G36560.1 | 33.043 | 115 | 72 | 2 | 106 | 215 | 108 | 222 | 9.88e-11 | 62.8 |
Find 99 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGAGATACTTTCGCTTTC+GGG | 0.112808 | 8_1:+1449499 | Msa1171630:CDS |
| GCAGGTCCTTTGGTTGCTTC+TGG | 0.205503 | 8_1:+1449613 | Msa1171630:CDS |
| GTACCATTATGCAACAAATT+TGG | 0.220914 | 8_1:-1449862 | None:intergenic |
| CAGGAGCAGCCGGCTGTCTA+AGG | 0.232707 | 8_1:-1449450 | None:intergenic |
| GTTGTTGGTGGTTCTGTTGC+AGG | 0.265821 | 8_1:+1449595 | Msa1171630:CDS |
| CCTTCTCCGGCTGGAGCTAC+TGG | 0.276244 | 8_1:+1449538 | Msa1171630:CDS |
| TTCTTCTCAAGGTTTGGAAT+TGG | 0.279897 | 8_1:+1449786 | Msa1171630:CDS |
| GGTTATAACAATGGGTGGTT+TGG | 0.288461 | 8_1:-1449284 | None:intergenic |
| TTGCTGTTGCTGCTGTTTGT+TGG | 0.296688 | 8_1:-1449148 | None:intergenic |
| GAAGGAGGAGGACGAGGAGG+TGG | 0.303163 | 8_1:-1449916 | None:intergenic |
| GTTATAACAATGGGTGGTTT+GGG | 0.305692 | 8_1:-1449283 | None:intergenic |
| AAATGCCTCATGATGTGTTT+TGG | 0.306421 | 8_1:+1449887 | Msa1171630:CDS |
| CCTCCAAATTTGTTGCATAA+TGG | 0.306945 | 8_1:+1449859 | Msa1171630:CDS |
| TCTTCTCAAGGTTTGGAATT+GGG | 0.310019 | 8_1:+1449787 | Msa1171630:CDS |
| GGTTGCTTCTGGACCTGTTA+TGG | 0.315696 | 8_1:+1449624 | Msa1171630:CDS |
| TGTTTATTTAGCTGGTGGTC+AGG | 0.322450 | 8_1:+1449567 | Msa1171630:CDS |
| GGTGGTCAGGGGCAGGTTGT+TGG | 0.325929 | 8_1:+1449580 | Msa1171630:CDS |
| GGTGGTGTTATTACTCTTCA+TGG | 0.329783 | 8_1:+1449472 | Msa1171630:CDS |
| ATTCGAGATACTTTCGCTTT+CGG | 0.341376 | 8_1:+1449498 | Msa1171630:CDS |
| CTACCTCCGCCTTCTCCGGC+TGG | 0.357947 | 8_1:+1449529 | Msa1171630:CDS |
| ACATGGCTTCTTAGCGCGTT+GGG | 0.359556 | 8_1:-1449316 | None:intergenic |
| GAAAAGAGAGCAAGAGTTGA+TGG | 0.369566 | 8_1:+1449102 | Msa1171630:CDS |
| TAGTTCTTCTTCTCAAGGTT+TGG | 0.373138 | 8_1:+1449780 | Msa1171630:CDS |
| GGATTAACTGTTTATTTAGC+TGG | 0.378249 | 8_1:+1449559 | Msa1171630:CDS |
| GTAGCAGCAATAACCATAAC+AGG | 0.415453 | 8_1:-1449637 | None:intergenic |
| GTGGGCTGGAAATGTGGCTA+TGG | 0.419505 | 8_1:+1449033 | Msa1171630:CDS |
| GGAGGAGGACGAGGAGGTGG+AGG | 0.420358 | 8_1:-1449913 | None:intergenic |
| TTTAGCTGGTGGTCAGGGGC+AGG | 0.423340 | 8_1:+1449573 | Msa1171630:CDS |
| CTTAGACAGCCGGCTGCTCC+TGG | 0.434867 | 8_1:+1449451 | Msa1171630:CDS |
| GCATCATCAACAACTTCAAC+AGG | 0.441442 | 8_1:+1449813 | Msa1171630:CDS |
| TGGTTCTGTTGCAGGTCCTT+TGG | 0.443762 | 8_1:+1449603 | Msa1171630:CDS |
| GGTCAGGGGCAGGTTGTTGG+TGG | 0.444022 | 8_1:+1449583 | Msa1171630:CDS |
| CCACTGCTACCTGGCTCAGA+TGG | 0.446968 | 8_1:-1449217 | None:intergenic |
| CTCCGACCACCACTGCTACC+TGG | 0.451310 | 8_1:-1449226 | None:intergenic |
| GTTACTAGTTCTTCTTCTCA+AGG | 0.454048 | 8_1:+1449775 | Msa1171630:CDS |
| ATGGCAAATCGTTGGTGGGC+TGG | 0.456372 | 8_1:+1449019 | Msa1171630:CDS |
| CTAAAACTCTTTCAGAAAGA+AGG | 0.460091 | 8_1:-1449934 | None:intergenic |
| GACATGGCTTCTTAGCGCGT+TGG | 0.461821 | 8_1:-1449317 | None:intergenic |
| GTTTATTTAGCTGGTGGTCA+GGG | 0.471442 | 8_1:+1449568 | Msa1171630:CDS |
| CACTGCTACCTGGCTCAGAT+GGG | 0.484019 | 8_1:-1449216 | None:intergenic |
| GTGACGGCGGTTAGCAAAGT+TGG | 0.484913 | 8_1:-1449380 | None:intergenic |
| CAGAAAGAAGGAGGAGGACG+AGG | 0.494395 | 8_1:-1449922 | None:intergenic |
| ACCACCTTGTTCATCTTCCA+AGG | 0.497250 | 8_1:-1449689 | None:intergenic |
| TTTGGAGGCAAATTATACAT+AGG | 0.498673 | 8_1:-1449844 | None:intergenic |
| GAAATGCAAGTTCAACAATC+TGG | 0.502411 | 8_1:+1449724 | Msa1171630:CDS |
| TTCAGATGTTCAAGTGATGA+TGG | 0.505534 | 8_1:-1449082 | None:intergenic |
| GATTCTTTGGTTATAACAAT+GGG | 0.518538 | 8_1:-1449292 | None:intergenic |
| GGATTCTTTGGTTATAACAA+TGG | 0.520979 | 8_1:-1449293 | None:intergenic |
| TACTTATGAGAGGTTGCCCT+TGG | 0.521945 | 8_1:+1449672 | Msa1171630:CDS |
| TGGGCTGGAAATGTGGCTAT+GGG | 0.522347 | 8_1:+1449034 | Msa1171630:CDS |
| CCGCCGTCACCGTGGTGTGT+CGG | 0.526432 | 8_1:+1449393 | Msa1171630:CDS |
| GTAGCTCCAGCCGGAGAAGG+CGG | 0.528688 | 8_1:-1449535 | None:intergenic |
| CCAGTAGCTCCAGCCGGAGA+AGG | 0.532784 | 8_1:-1449538 | None:intergenic |
| CACTGCTGATTTCCAAGACA+TGG | 0.534335 | 8_1:-1449333 | None:intergenic |
| GAACAAAACCCATCTGAGCC+AGG | 0.536402 | 8_1:+1449208 | Msa1171630:CDS |
| AGGCCACGTGGGAGACCACC+AGG | 0.537133 | 8_1:+1449247 | Msa1171630:CDS |
| GCTCCAGCCGGAGAAGGCGG+AGG | 0.543492 | 8_1:-1449532 | None:intergenic |
| TTAACTGTTTATTTAGCTGG+TGG | 0.548179 | 8_1:+1449562 | Msa1171630:CDS |
| AAACCGACACACCACGGTGA+CGG | 0.553487 | 8_1:-1449396 | None:intergenic |
| CCATTATGCAACAAATTTGG+AGG | 0.558327 | 8_1:-1449859 | None:intergenic |
| TAATGTAACCCTTAGACAGC+CGG | 0.563997 | 8_1:+1449441 | Msa1171630:CDS |
| AGATTATGGCAAATCGTTGG+TGG | 0.564432 | 8_1:+1449014 | None:intergenic |
| ATAACACCACCAGGAGCAGC+CGG | 0.567921 | 8_1:-1449460 | None:intergenic |
| TTTATTTAGCTGGTGGTCAG+GGG | 0.570136 | 8_1:+1449569 | Msa1171630:CDS |
| AGGAGCAGCCGGCTGTCTAA+GGG | 0.570747 | 8_1:-1449449 | None:intergenic |
| CATGGCTTCTTAGCGCGTTG+GGG | 0.572748 | 8_1:-1449315 | None:intergenic |
| TCAAGTGATGATGGTGATGA+AGG | 0.576683 | 8_1:-1449073 | None:intergenic |
| AGAAGATTATGGCAAATCGT+TGG | 0.586611 | 8_1:+1449011 | None:intergenic |
| TTGCTAATGCTACTTATGAG+AGG | 0.586891 | 8_1:+1449662 | Msa1171630:CDS |
| TCTTTGGTTATAACAATGGG+TGG | 0.587176 | 8_1:-1449289 | None:intergenic |
| AGCCAGGTAGCAGTGGTGGT+CGG | 0.589179 | 8_1:+1449224 | Msa1171630:CDS |
| AGTGGTGGTCGGAGGCCACG+TGG | 0.591936 | 8_1:+1449235 | Msa1171630:CDS |
| GCAAGTTCAACAATCTGGTG+TGG | 0.593311 | 8_1:+1449729 | Msa1171630:CDS |
| ATGGCTTCTTAGCGCGTTGG+GGG | 0.597936 | 8_1:-1449314 | None:intergenic |
| GATTATGGCAAATCGTTGGT+GGG | 0.599720 | 8_1:+1449015 | None:intergenic |
| TCTGAGCCAGGTAGCAGTGG+TGG | 0.601683 | 8_1:+1449220 | Msa1171630:CDS |
| CCATCTGAGCCAGGTAGCAG+TGG | 0.602057 | 8_1:+1449217 | Msa1171630:CDS |
| CTCTTTCAGAAAGAAGGAGG+AGG | 0.605004 | 8_1:-1449928 | None:intergenic |
| AAAGAAGGAGGAGGACGAGG+AGG | 0.613275 | 8_1:-1449919 | None:intergenic |
| CCGACACACCACGGTGACGG+CGG | 0.613394 | 8_1:-1449393 | None:intergenic |
| CAGGTAGCAGTGGTGGTCGG+AGG | 0.616953 | 8_1:+1449227 | Msa1171630:CDS |
| GTTAATCCAGTAGCTCCAGC+CGG | 0.618525 | 8_1:-1449544 | None:intergenic |
| ACAAGGTGGTGGTGATCAAG+AGG | 0.619032 | 8_1:+1449702 | Msa1171630:CDS |
| CCACCTTGTTCATCTTCCAA+GGG | 0.619149 | 8_1:-1449688 | None:intergenic |
| GTGGTGGTCGGAGGCCACGT+GGG | 0.622577 | 8_1:+1449236 | Msa1171630:CDS |
| TCGTTGGTGGGCTGGAAATG+TGG | 0.623949 | 8_1:+1449027 | Msa1171630:CDS |
| CAGCAGTGGTAGTGATGTGG+CGG | 0.628263 | 8_1:+1449348 | Msa1171630:CDS |
| CACTCAAAACCGACACACCA+CGG | 0.631096 | 8_1:-1449402 | None:intergenic |
| AAACTCTTTCAGAAAGAAGG+AGG | 0.632824 | 8_1:-1449931 | None:intergenic |
| TTTGCTAACCGCCGTCACCG+TGG | 0.638394 | 8_1:+1449385 | Msa1171630:CDS |
| GGACCCCAAAACACATCATG+AGG | 0.638475 | 8_1:-1449892 | None:intergenic |
| TTGGAAGATGAACAAGGTGG+TGG | 0.639490 | 8_1:+1449691 | Msa1171630:CDS |
| GATCCTGGTGGTCTCCCACG+TGG | 0.640272 | 8_1:-1449250 | None:intergenic |
| TTGCCCTTGGAAGATGAACA+AGG | 0.667444 | 8_1:+1449685 | Msa1171630:CDS |
| TGAAGAGTAATAACACCACC+AGG | 0.674054 | 8_1:-1449469 | None:intergenic |
| CATGTCTTGGAAATCAGCAG+TGG | 0.685401 | 8_1:+1449334 | Msa1171630:CDS |
| ACAGGTCCAGAAGCAACCAA+AGG | 0.692630 | 8_1:-1449619 | None:intergenic |
| AATCAGCAGTGGTAGTGATG+TGG | 0.709338 | 8_1:+1449345 | Msa1171630:CDS |
| CCCTTGGAAGATGAACAAGG+TGG | 0.848232 | 8_1:+1449688 | Msa1171630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GATTCTTTGGTTATAACAAT+GGG | - | chr8_1:1449295-1449314 | None:intergenic | 25.0% |
| ! | GATTCTTTGGTTATAACAAT+GGG | - | chr8_1:1449295-1449314 | None:intergenic | 25.0% |
| GGATTCTTTGGTTATAACAA+TGG | - | chr8_1:1449296-1449315 | None:intergenic | 30.0% | |
| GGATTAACTGTTTATTTAGC+TGG | + | chr8_1:1449559-1449578 | Msa1171630:CDS | 30.0% | |
| TTAACTGTTTATTTAGCTGG+TGG | + | chr8_1:1449562-1449581 | Msa1171630:CDS | 30.0% | |
| TTTGGAGGCAAATTATACAT+AGG | - | chr8_1:1449847-1449866 | None:intergenic | 30.0% | |
| GTACCATTATGCAACAAATT+TGG | - | chr8_1:1449865-1449884 | None:intergenic | 30.0% | |
| GGATTCTTTGGTTATAACAA+TGG | - | chr8_1:1449296-1449315 | None:intergenic | 30.0% | |
| GGATTAACTGTTTATTTAGC+TGG | + | chr8_1:1449559-1449578 | Msa1171630:CDS | 30.0% | |
| TTAACTGTTTATTTAGCTGG+TGG | + | chr8_1:1449562-1449581 | Msa1171630:CDS | 30.0% | |
| TTTGGAGGCAAATTATACAT+AGG | - | chr8_1:1449847-1449866 | None:intergenic | 30.0% | |
| GTACCATTATGCAACAAATT+TGG | - | chr8_1:1449865-1449884 | None:intergenic | 30.0% | |
| TTCAGATGTTCAAGTGATGA+TGG | - | chr8_1:1449085-1449104 | None:intergenic | 35.0% | |
| GTTATAACAATGGGTGGTTT+GGG | - | chr8_1:1449286-1449305 | None:intergenic | 35.0% | |
| TCTTTGGTTATAACAATGGG+TGG | - | chr8_1:1449292-1449311 | None:intergenic | 35.0% | |
| ATTCGAGATACTTTCGCTTT+CGG | + | chr8_1:1449498-1449517 | Msa1171630:CDS | 35.0% | |
| ! | TTGCTAATGCTACTTATGAG+AGG | + | chr8_1:1449662-1449681 | Msa1171630:CDS | 35.0% |
| GAAATGCAAGTTCAACAATC+TGG | + | chr8_1:1449724-1449743 | Msa1171630:CDS | 35.0% | |
| ! | GTTACTAGTTCTTCTTCTCA+AGG | + | chr8_1:1449775-1449794 | Msa1171630:CDS | 35.0% |
| TAGTTCTTCTTCTCAAGGTT+TGG | + | chr8_1:1449780-1449799 | Msa1171630:CDS | 35.0% | |
| ! | TTCTTCTCAAGGTTTGGAAT+TGG | + | chr8_1:1449786-1449805 | Msa1171630:CDS | 35.0% |
| ! | TCTTCTCAAGGTTTGGAATT+GGG | + | chr8_1:1449787-1449806 | Msa1171630:CDS | 35.0% |
| CCATTATGCAACAAATTTGG+AGG | - | chr8_1:1449862-1449881 | None:intergenic | 35.0% | |
| !! | CCTCCAAATTTGTTGCATAA+TGG | + | chr8_1:1449859-1449878 | Msa1171630:CDS | 35.0% |
| ! | AAATGCCTCATGATGTGTTT+TGG | + | chr8_1:1449887-1449906 | Msa1171630:CDS | 35.0% |
| ! | AATGCCTCATGATGTGTTTT+GGG | + | chr8_1:1449888-1449907 | Msa1171630:CDS | 35.0% |
| TTCAGATGTTCAAGTGATGA+TGG | - | chr8_1:1449085-1449104 | None:intergenic | 35.0% | |
| GTTATAACAATGGGTGGTTT+GGG | - | chr8_1:1449286-1449305 | None:intergenic | 35.0% | |
| TCTTTGGTTATAACAATGGG+TGG | - | chr8_1:1449292-1449311 | None:intergenic | 35.0% | |
| ATTCGAGATACTTTCGCTTT+CGG | + | chr8_1:1449498-1449517 | Msa1171630:CDS | 35.0% | |
| ! | TTGCTAATGCTACTTATGAG+AGG | + | chr8_1:1449662-1449681 | Msa1171630:CDS | 35.0% |
| GAAATGCAAGTTCAACAATC+TGG | + | chr8_1:1449724-1449743 | Msa1171630:CDS | 35.0% | |
| ! | GTTACTAGTTCTTCTTCTCA+AGG | + | chr8_1:1449775-1449794 | Msa1171630:CDS | 35.0% |
| TAGTTCTTCTTCTCAAGGTT+TGG | + | chr8_1:1449780-1449799 | Msa1171630:CDS | 35.0% | |
| ! | TTCTTCTCAAGGTTTGGAAT+TGG | + | chr8_1:1449786-1449805 | Msa1171630:CDS | 35.0% |
| ! | TCTTCTCAAGGTTTGGAATT+GGG | + | chr8_1:1449787-1449806 | Msa1171630:CDS | 35.0% |
| CCATTATGCAACAAATTTGG+AGG | - | chr8_1:1449862-1449881 | None:intergenic | 35.0% | |
| !! | CCTCCAAATTTGTTGCATAA+TGG | + | chr8_1:1449859-1449878 | Msa1171630:CDS | 35.0% |
| ! | AAATGCCTCATGATGTGTTT+TGG | + | chr8_1:1449887-1449906 | Msa1171630:CDS | 35.0% |
| ! | AATGCCTCATGATGTGTTTT+GGG | + | chr8_1:1449888-1449907 | Msa1171630:CDS | 35.0% |
| !! | TCAAGTGATGATGGTGATGA+AGG | - | chr8_1:1449076-1449095 | None:intergenic | 40.0% |
| GAAAAGAGAGCAAGAGTTGA+TGG | + | chr8_1:1449102-1449121 | Msa1171630:CDS | 40.0% | |
| CAACAACAACAACAACGAAG+AGG | + | chr8_1:1449168-1449187 | Msa1171630:CDS | 40.0% | |
| !!! | TTGGGTTTGTTTTTGGATCC+TGG | - | chr8_1:1449268-1449287 | None:intergenic | 40.0% |
| GGTTATAACAATGGGTGGTT+TGG | - | chr8_1:1449287-1449306 | None:intergenic | 40.0% | |
| TAATGTAACCCTTAGACAGC+CGG | + | chr8_1:1449441-1449460 | Msa1171630:CDS | 40.0% | |
| TGAAGAGTAATAACACCACC+AGG | - | chr8_1:1449472-1449491 | None:intergenic | 40.0% | |
| !! | GGTGGTGTTATTACTCTTCA+TGG | + | chr8_1:1449472-1449491 | Msa1171630:CDS | 40.0% |
| TTCGAGATACTTTCGCTTTC+GGG | + | chr8_1:1449499-1449518 | Msa1171630:CDS | 40.0% | |
| TGTTTATTTAGCTGGTGGTC+AGG | + | chr8_1:1449567-1449586 | Msa1171630:CDS | 40.0% | |
| GTTTATTTAGCTGGTGGTCA+GGG | + | chr8_1:1449568-1449587 | Msa1171630:CDS | 40.0% | |
| TTTATTTAGCTGGTGGTCAG+GGG | + | chr8_1:1449569-1449588 | Msa1171630:CDS | 40.0% | |
| GTAGCAGCAATAACCATAAC+AGG | - | chr8_1:1449640-1449659 | None:intergenic | 40.0% | |
| GCATCATCAACAACTTCAAC+AGG | + | chr8_1:1449813-1449832 | Msa1171630:CDS | 40.0% | |
| ! | ATGCCTCATGATGTGTTTTG+GGG | + | chr8_1:1449889-1449908 | Msa1171630:CDS | 40.0% |
| !! | TCAAGTGATGATGGTGATGA+AGG | - | chr8_1:1449076-1449095 | None:intergenic | 40.0% |
| GAAAAGAGAGCAAGAGTTGA+TGG | + | chr8_1:1449102-1449121 | Msa1171630:CDS | 40.0% | |
| CAACAACAACAACAACGAAG+AGG | + | chr8_1:1449168-1449187 | Msa1171630:CDS | 40.0% | |
| !!! | TTGGGTTTGTTTTTGGATCC+TGG | - | chr8_1:1449268-1449287 | None:intergenic | 40.0% |
| GGTTATAACAATGGGTGGTT+TGG | - | chr8_1:1449287-1449306 | None:intergenic | 40.0% | |
| TAATGTAACCCTTAGACAGC+CGG | + | chr8_1:1449441-1449460 | Msa1171630:CDS | 40.0% | |
| TGAAGAGTAATAACACCACC+AGG | - | chr8_1:1449472-1449491 | None:intergenic | 40.0% | |
| !! | GGTGGTGTTATTACTCTTCA+TGG | + | chr8_1:1449472-1449491 | Msa1171630:CDS | 40.0% |
| TTCGAGATACTTTCGCTTTC+GGG | + | chr8_1:1449499-1449518 | Msa1171630:CDS | 40.0% | |
| TGTTTATTTAGCTGGTGGTC+AGG | + | chr8_1:1449567-1449586 | Msa1171630:CDS | 40.0% | |
| GTTTATTTAGCTGGTGGTCA+GGG | + | chr8_1:1449568-1449587 | Msa1171630:CDS | 40.0% | |
| TTTATTTAGCTGGTGGTCAG+GGG | + | chr8_1:1449569-1449588 | Msa1171630:CDS | 40.0% | |
| GTAGCAGCAATAACCATAAC+AGG | - | chr8_1:1449640-1449659 | None:intergenic | 40.0% | |
| GCATCATCAACAACTTCAAC+AGG | + | chr8_1:1449813-1449832 | Msa1171630:CDS | 40.0% | |
| ! | ATGCCTCATGATGTGTTTTG+GGG | + | chr8_1:1449889-1449908 | Msa1171630:CDS | 40.0% |
| ! | TTGCTGTTGCTGCTGTTTGT+TGG | - | chr8_1:1449151-1449170 | None:intergenic | 45.0% |
| !!! | GGTTTGTTTTTGGATCCTGG+TGG | - | chr8_1:1449265-1449284 | None:intergenic | 45.0% |
| !! | GGGTGGTTTGGGTTTGTTTT+TGG | - | chr8_1:1449275-1449294 | None:intergenic | 45.0% |
| !! | CACTGCTGATTTCCAAGACA+TGG | - | chr8_1:1449336-1449355 | None:intergenic | 45.0% |
| CATGTCTTGGAAATCAGCAG+TGG | + | chr8_1:1449334-1449353 | Msa1171630:CDS | 45.0% | |
| ! | AATCAGCAGTGGTAGTGATG+TGG | + | chr8_1:1449345-1449364 | Msa1171630:CDS | 45.0% |
| TACTTATGAGAGGTTGCCCT+TGG | + | chr8_1:1449672-1449691 | Msa1171630:CDS | 45.0% | |
| TTGCCCTTGGAAGATGAACA+AGG | + | chr8_1:1449685-1449704 | Msa1171630:CDS | 45.0% | |
| CCACCTTGTTCATCTTCCAA+GGG | - | chr8_1:1449691-1449710 | None:intergenic | 45.0% | |
| ACCACCTTGTTCATCTTCCA+AGG | - | chr8_1:1449692-1449711 | None:intergenic | 45.0% | |
| TTGGAAGATGAACAAGGTGG+TGG | + | chr8_1:1449691-1449710 | Msa1171630:CDS | 45.0% | |
| GCAAGTTCAACAATCTGGTG+TGG | + | chr8_1:1449729-1449748 | Msa1171630:CDS | 45.0% | |
| ! | TTGCTGTTGCTGCTGTTTGT+TGG | - | chr8_1:1449151-1449170 | None:intergenic | 45.0% |
| !!! | GGTTTGTTTTTGGATCCTGG+TGG | - | chr8_1:1449265-1449284 | None:intergenic | 45.0% |
| !! | GGGTGGTTTGGGTTTGTTTT+TGG | - | chr8_1:1449275-1449294 | None:intergenic | 45.0% |
| !! | CACTGCTGATTTCCAAGACA+TGG | - | chr8_1:1449336-1449355 | None:intergenic | 45.0% |
| CATGTCTTGGAAATCAGCAG+TGG | + | chr8_1:1449334-1449353 | Msa1171630:CDS | 45.0% | |
| ! | AATCAGCAGTGGTAGTGATG+TGG | + | chr8_1:1449345-1449364 | Msa1171630:CDS | 45.0% |
| TACTTATGAGAGGTTGCCCT+TGG | + | chr8_1:1449672-1449691 | Msa1171630:CDS | 45.0% | |
| TTGCCCTTGGAAGATGAACA+AGG | + | chr8_1:1449685-1449704 | Msa1171630:CDS | 45.0% | |
| CCACCTTGTTCATCTTCCAA+GGG | - | chr8_1:1449691-1449710 | None:intergenic | 45.0% | |
| ACCACCTTGTTCATCTTCCA+AGG | - | chr8_1:1449692-1449711 | None:intergenic | 45.0% | |
| TTGGAAGATGAACAAGGTGG+TGG | + | chr8_1:1449691-1449710 | Msa1171630:CDS | 45.0% | |
| GCAAGTTCAACAATCTGGTG+TGG | + | chr8_1:1449729-1449748 | Msa1171630:CDS | 45.0% | |
| ! | TGGGCTGGAAATGTGGCTAT+GGG | + | chr8_1:1449034-1449053 | Msa1171630:CDS | 50.0% |
| GAACAAAACCCATCTGAGCC+AGG | + | chr8_1:1449208-1449227 | Msa1171630:CDS | 50.0% | |
| ACATGGCTTCTTAGCGCGTT+GGG | - | chr8_1:1449319-1449338 | None:intergenic | 50.0% | |
| CACTCAAAACCGACACACCA+CGG | - | chr8_1:1449405-1449424 | None:intergenic | 50.0% | |
| !!! | GTGGTGTGTCGGTTTTGAGT+GGG | + | chr8_1:1449404-1449423 | Msa1171630:CDS | 50.0% |
| ! | TTTTCTACCTCCGCCTTCTC+CGG | + | chr8_1:1449525-1449544 | Msa1171630:CDS | 50.0% |
| GTTAATCCAGTAGCTCCAGC+CGG | - | chr8_1:1449547-1449566 | None:intergenic | 50.0% | |
| !! | GTTGTTGGTGGTTCTGTTGC+AGG | + | chr8_1:1449595-1449614 | Msa1171630:CDS | 50.0% |
| ! | TGGTTCTGTTGCAGGTCCTT+TGG | + | chr8_1:1449603-1449622 | Msa1171630:CDS | 50.0% |
| ACAGGTCCAGAAGCAACCAA+AGG | - | chr8_1:1449622-1449641 | None:intergenic | 50.0% | |
| GGTTGCTTCTGGACCTGTTA+TGG | + | chr8_1:1449624-1449643 | Msa1171630:CDS | 50.0% | |
| CCCTTGGAAGATGAACAAGG+TGG | + | chr8_1:1449688-1449707 | Msa1171630:CDS | 50.0% | |
| ! | ACAAGGTGGTGGTGATCAAG+AGG | + | chr8_1:1449702-1449721 | Msa1171630:CDS | 50.0% |
| GGACCCCAAAACACATCATG+AGG | - | chr8_1:1449895-1449914 | None:intergenic | 50.0% | |
| ! | TGGGCTGGAAATGTGGCTAT+GGG | + | chr8_1:1449034-1449053 | Msa1171630:CDS | 50.0% |
| GAACAAAACCCATCTGAGCC+AGG | + | chr8_1:1449208-1449227 | Msa1171630:CDS | 50.0% | |
| ACATGGCTTCTTAGCGCGTT+GGG | - | chr8_1:1449319-1449338 | None:intergenic | 50.0% | |
| CACTCAAAACCGACACACCA+CGG | - | chr8_1:1449405-1449424 | None:intergenic | 50.0% | |
| !!! | GTGGTGTGTCGGTTTTGAGT+GGG | + | chr8_1:1449404-1449423 | Msa1171630:CDS | 50.0% |
| ! | TTTTCTACCTCCGCCTTCTC+CGG | + | chr8_1:1449525-1449544 | Msa1171630:CDS | 50.0% |
| GTTAATCCAGTAGCTCCAGC+CGG | - | chr8_1:1449547-1449566 | None:intergenic | 50.0% | |
| !! | GTTGTTGGTGGTTCTGTTGC+AGG | + | chr8_1:1449595-1449614 | Msa1171630:CDS | 50.0% |
| ! | TGGTTCTGTTGCAGGTCCTT+TGG | + | chr8_1:1449603-1449622 | Msa1171630:CDS | 50.0% |
| ACAGGTCCAGAAGCAACCAA+AGG | - | chr8_1:1449622-1449641 | None:intergenic | 50.0% | |
| GGTTGCTTCTGGACCTGTTA+TGG | + | chr8_1:1449624-1449643 | Msa1171630:CDS | 50.0% | |
| CCCTTGGAAGATGAACAAGG+TGG | + | chr8_1:1449688-1449707 | Msa1171630:CDS | 50.0% | |
| ! | ACAAGGTGGTGGTGATCAAG+AGG | + | chr8_1:1449702-1449721 | Msa1171630:CDS | 50.0% |
| GGACCCCAAAACACATCATG+AGG | - | chr8_1:1449895-1449914 | None:intergenic | 50.0% | |
| ! | ATGGCAAATCGTTGGTGGGC+TGG | + | chr8_1:1449019-1449038 | Msa1171630:CDS | 55.0% |
| !! | TCGTTGGTGGGCTGGAAATG+TGG | + | chr8_1:1449027-1449046 | Msa1171630:CDS | 55.0% |
| !! | GTGGGCTGGAAATGTGGCTA+TGG | + | chr8_1:1449033-1449052 | Msa1171630:CDS | 55.0% |
| CACTGCTACCTGGCTCAGAT+GGG | - | chr8_1:1449219-1449238 | None:intergenic | 55.0% | |
| TAGCGCGTTGGGGGATTCTT+TGG | - | chr8_1:1449308-1449327 | None:intergenic | 55.0% | |
| ATGGCTTCTTAGCGCGTTGG+GGG | - | chr8_1:1449317-1449336 | None:intergenic | 55.0% | |
| CATGGCTTCTTAGCGCGTTG+GGG | - | chr8_1:1449318-1449337 | None:intergenic | 55.0% | |
| GACATGGCTTCTTAGCGCGT+TGG | - | chr8_1:1449320-1449339 | None:intergenic | 55.0% | |
| CGCGCTAAGAAGCCATGTCT+TGG | + | chr8_1:1449321-1449340 | Msa1171630:CDS | 55.0% | |
| ! | CAGCAGTGGTAGTGATGTGG+CGG | + | chr8_1:1449348-1449367 | Msa1171630:CDS | 55.0% |
| GTGACGGCGGTTAGCAAAGT+TGG | - | chr8_1:1449383-1449402 | None:intergenic | 55.0% | |
| AAACCGACACACCACGGTGA+CGG | - | chr8_1:1449399-1449418 | None:intergenic | 55.0% | |
| !!! | CGTGGTGTGTCGGTTTTGAG+TGG | + | chr8_1:1449403-1449422 | Msa1171630:CDS | 55.0% |
| !!! | GTGTCGGTTTTGAGTGGGAG+CGG | + | chr8_1:1449409-1449428 | Msa1171630:CDS | 55.0% |
| ATAACACCACCAGGAGCAGC+CGG | - | chr8_1:1449463-1449482 | None:intergenic | 55.0% | |
| GCAGGTCCTTTGGTTGCTTC+TGG | + | chr8_1:1449613-1449632 | Msa1171630:CDS | 55.0% | |
| AAAGAAGGAGGAGGACGAGG+AGG | - | chr8_1:1449922-1449941 | None:intergenic | 55.0% | |
| CAGAAAGAAGGAGGAGGACG+AGG | - | chr8_1:1449925-1449944 | None:intergenic | 55.0% | |
| ! | ATGGCAAATCGTTGGTGGGC+TGG | + | chr8_1:1449019-1449038 | Msa1171630:CDS | 55.0% |
| !! | TCGTTGGTGGGCTGGAAATG+TGG | + | chr8_1:1449027-1449046 | Msa1171630:CDS | 55.0% |
| !! | GTGGGCTGGAAATGTGGCTA+TGG | + | chr8_1:1449033-1449052 | Msa1171630:CDS | 55.0% |
| CACTGCTACCTGGCTCAGAT+GGG | - | chr8_1:1449219-1449238 | None:intergenic | 55.0% | |
| TAGCGCGTTGGGGGATTCTT+TGG | - | chr8_1:1449308-1449327 | None:intergenic | 55.0% | |
| ATGGCTTCTTAGCGCGTTGG+GGG | - | chr8_1:1449317-1449336 | None:intergenic | 55.0% | |
| CATGGCTTCTTAGCGCGTTG+GGG | - | chr8_1:1449318-1449337 | None:intergenic | 55.0% | |
| GACATGGCTTCTTAGCGCGT+TGG | - | chr8_1:1449320-1449339 | None:intergenic | 55.0% | |
| CGCGCTAAGAAGCCATGTCT+TGG | + | chr8_1:1449321-1449340 | Msa1171630:CDS | 55.0% | |
| ! | CAGCAGTGGTAGTGATGTGG+CGG | + | chr8_1:1449348-1449367 | Msa1171630:CDS | 55.0% |
| GTGACGGCGGTTAGCAAAGT+TGG | - | chr8_1:1449383-1449402 | None:intergenic | 55.0% | |
| AAACCGACACACCACGGTGA+CGG | - | chr8_1:1449399-1449418 | None:intergenic | 55.0% | |
| !!! | CGTGGTGTGTCGGTTTTGAG+TGG | + | chr8_1:1449403-1449422 | Msa1171630:CDS | 55.0% |
| !!! | GTGTCGGTTTTGAGTGGGAG+CGG | + | chr8_1:1449409-1449428 | Msa1171630:CDS | 55.0% |
| ATAACACCACCAGGAGCAGC+CGG | - | chr8_1:1449463-1449482 | None:intergenic | 55.0% | |
| GCAGGTCCTTTGGTTGCTTC+TGG | + | chr8_1:1449613-1449632 | Msa1171630:CDS | 55.0% | |
| AAAGAAGGAGGAGGACGAGG+AGG | - | chr8_1:1449922-1449941 | None:intergenic | 55.0% | |
| CAGAAAGAAGGAGGAGGACG+AGG | - | chr8_1:1449925-1449944 | None:intergenic | 55.0% | |
| CCACTGCTACCTGGCTCAGA+TGG | - | chr8_1:1449220-1449239 | None:intergenic | 60.0% | |
| CCATCTGAGCCAGGTAGCAG+TGG | + | chr8_1:1449217-1449236 | Msa1171630:CDS | 60.0% | |
| TCTGAGCCAGGTAGCAGTGG+TGG | + | chr8_1:1449220-1449239 | Msa1171630:CDS | 60.0% | |
| AGCCAGGTAGCAGTGGTGGT+CGG | + | chr8_1:1449224-1449243 | Msa1171630:CDS | 60.0% | |
| TTTGCTAACCGCCGTCACCG+TGG | + | chr8_1:1449385-1449404 | Msa1171630:CDS | 60.0% | |
| AGGAGCAGCCGGCTGTCTAA+GGG | - | chr8_1:1449452-1449471 | None:intergenic | 60.0% | |
| TTTAGCTGGTGGTCAGGGGC+AGG | + | chr8_1:1449573-1449592 | Msa1171630:CDS | 60.0% | |
| CCACTGCTACCTGGCTCAGA+TGG | - | chr8_1:1449220-1449239 | None:intergenic | 60.0% | |
| CCATCTGAGCCAGGTAGCAG+TGG | + | chr8_1:1449217-1449236 | Msa1171630:CDS | 60.0% | |
| TCTGAGCCAGGTAGCAGTGG+TGG | + | chr8_1:1449220-1449239 | Msa1171630:CDS | 60.0% | |
| AGCCAGGTAGCAGTGGTGGT+CGG | + | chr8_1:1449224-1449243 | Msa1171630:CDS | 60.0% | |
| TTTGCTAACCGCCGTCACCG+TGG | + | chr8_1:1449385-1449404 | Msa1171630:CDS | 60.0% | |
| AGGAGCAGCCGGCTGTCTAA+GGG | - | chr8_1:1449452-1449471 | None:intergenic | 60.0% | |
| TTTAGCTGGTGGTCAGGGGC+AGG | + | chr8_1:1449573-1449592 | Msa1171630:CDS | 60.0% | |
| CTCCGACCACCACTGCTACC+TGG | - | chr8_1:1449229-1449248 | None:intergenic | 65.0% | |
| CAGGTAGCAGTGGTGGTCGG+AGG | + | chr8_1:1449227-1449246 | Msa1171630:CDS | 65.0% | |
| GATCCTGGTGGTCTCCCACG+TGG | - | chr8_1:1449253-1449272 | None:intergenic | 65.0% | |
| CAGGAGCAGCCGGCTGTCTA+AGG | - | chr8_1:1449453-1449472 | None:intergenic | 65.0% | |
| CTTAGACAGCCGGCTGCTCC+TGG | + | chr8_1:1449451-1449470 | Msa1171630:CDS | 65.0% | |
| GTAGCTCCAGCCGGAGAAGG+CGG | - | chr8_1:1449538-1449557 | None:intergenic | 65.0% | |
| CCAGTAGCTCCAGCCGGAGA+AGG | - | chr8_1:1449541-1449560 | None:intergenic | 65.0% | |
| CCTTCTCCGGCTGGAGCTAC+TGG | + | chr8_1:1449538-1449557 | Msa1171630:CDS | 65.0% | |
| GGTGGTCAGGGGCAGGTTGT+TGG | + | chr8_1:1449580-1449599 | Msa1171630:CDS | 65.0% | |
| GGTCAGGGGCAGGTTGTTGG+TGG | + | chr8_1:1449583-1449602 | Msa1171630:CDS | 65.0% | |
| GAAGGAGGAGGACGAGGAGG+TGG | - | chr8_1:1449919-1449938 | None:intergenic | 65.0% | |
| CTCCGACCACCACTGCTACC+TGG | - | chr8_1:1449229-1449248 | None:intergenic | 65.0% | |
| CAGGTAGCAGTGGTGGTCGG+AGG | + | chr8_1:1449227-1449246 | Msa1171630:CDS | 65.0% | |
| GATCCTGGTGGTCTCCCACG+TGG | - | chr8_1:1449253-1449272 | None:intergenic | 65.0% | |
| CAGGAGCAGCCGGCTGTCTA+AGG | - | chr8_1:1449453-1449472 | None:intergenic | 65.0% | |
| CTTAGACAGCCGGCTGCTCC+TGG | + | chr8_1:1449451-1449470 | Msa1171630:CDS | 65.0% | |
| GTAGCTCCAGCCGGAGAAGG+CGG | - | chr8_1:1449538-1449557 | None:intergenic | 65.0% | |
| CCAGTAGCTCCAGCCGGAGA+AGG | - | chr8_1:1449541-1449560 | None:intergenic | 65.0% | |
| CCTTCTCCGGCTGGAGCTAC+TGG | + | chr8_1:1449538-1449557 | Msa1171630:CDS | 65.0% | |
| GGTGGTCAGGGGCAGGTTGT+TGG | + | chr8_1:1449580-1449599 | Msa1171630:CDS | 65.0% | |
| GGTCAGGGGCAGGTTGTTGG+TGG | + | chr8_1:1449583-1449602 | Msa1171630:CDS | 65.0% | |
| GAAGGAGGAGGACGAGGAGG+TGG | - | chr8_1:1449919-1449938 | None:intergenic | 65.0% | |
| AGTGGTGGTCGGAGGCCACG+TGG | + | chr8_1:1449235-1449254 | Msa1171630:CDS | 70.0% | |
| GTGGTGGTCGGAGGCCACGT+GGG | + | chr8_1:1449236-1449255 | Msa1171630:CDS | 70.0% | |
| AGGCCACGTGGGAGACCACC+AGG | + | chr8_1:1449247-1449266 | Msa1171630:CDS | 70.0% | |
| ! | CCGACACACCACGGTGACGG+CGG | - | chr8_1:1449396-1449415 | None:intergenic | 70.0% |
| CCGCCGTCACCGTGGTGTGT+CGG | + | chr8_1:1449393-1449412 | Msa1171630:CDS | 70.0% | |
| AGACAGCCGGCTGCTCCTGG+TGG | + | chr8_1:1449454-1449473 | Msa1171630:CDS | 70.0% | |
| CTACCTCCGCCTTCTCCGGC+TGG | + | chr8_1:1449529-1449548 | Msa1171630:CDS | 70.0% | |
| GGAGGAGGACGAGGAGGTGG+AGG | - | chr8_1:1449916-1449935 | None:intergenic | 70.0% | |
| AGTGGTGGTCGGAGGCCACG+TGG | + | chr8_1:1449235-1449254 | Msa1171630:CDS | 70.0% | |
| GTGGTGGTCGGAGGCCACGT+GGG | + | chr8_1:1449236-1449255 | Msa1171630:CDS | 70.0% | |
| AGGCCACGTGGGAGACCACC+AGG | + | chr8_1:1449247-1449266 | Msa1171630:CDS | 70.0% | |
| ! | CCGACACACCACGGTGACGG+CGG | - | chr8_1:1449396-1449415 | None:intergenic | 70.0% |
| CCGCCGTCACCGTGGTGTGT+CGG | + | chr8_1:1449393-1449412 | Msa1171630:CDS | 70.0% | |
| AGACAGCCGGCTGCTCCTGG+TGG | + | chr8_1:1449454-1449473 | Msa1171630:CDS | 70.0% | |
| CTACCTCCGCCTTCTCCGGC+TGG | + | chr8_1:1449529-1449548 | Msa1171630:CDS | 70.0% | |
| GGAGGAGGACGAGGAGGTGG+AGG | - | chr8_1:1449916-1449935 | None:intergenic | 70.0% | |
| GCTCCAGCCGGAGAAGGCGG+AGG | - | chr8_1:1449535-1449554 | None:intergenic | 75.0% | |
| GCTCCAGCCGGAGAAGGCGG+AGG | - | chr8_1:1449535-1449554 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 1449019 | 1449945 | 1449019 | ID=Msa1171630;Name=Msa1171630 |
| chr8_1 | mRNA | 1449019 | 1449945 | 1449019 | ID=Msa1171630-mRNA-1;Parent=Msa1171630;Name=Msa1171630-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|308 |
| chr8_1 | exon | 1449019 | 1449945 | 1449019 | ID=Msa1171630-mRNA-1:exon:429;Parent=Msa1171630-mRNA-1 |
| chr8_1 | CDS | 1449019 | 1449945 | 1449019 | ID=Msa1171630-mRNA-1:cds;Parent=Msa1171630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
