Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159130 | RHN47541.1 | 90.724 | 539 | 8 | 5 | 1 | 504 | 1 | 532 | 0.0 | 949 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159130 | sp|Q9FKP2|CCX2_ARATH | 52.011 | 348 | 149 | 9 | 153 | 498 | 228 | 559 | 1.06e-97 | 308 |
| Msa1159130 | sp|Q9FKP2|CCX2_ARATH | 48.592 | 142 | 68 | 2 | 15 | 151 | 12 | 153 | 5.07e-13 | 75.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159130 | A0A396H4W1 | 90.724 | 539 | 8 | 5 | 1 | 504 | 1 | 532 | 0.0 | 949 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa1159130 | -0.805816 | 1.112183e-49 | -8.615850e-47 |
| Msa0048000 | Msa1159130 | 0.836402 | 9.554799e-57 | -8.615850e-47 |
| Msa0050730 | Msa1159130 | 0.804899 | 1.730888e-49 | -8.615850e-47 |
| Msa0050760 | Msa1159130 | 0.820967 | 5.183932e-53 | -8.615850e-47 |
| Msa0102750 | Msa1159130 | 0.820609 | 6.267799e-53 | -8.615850e-47 |
| Msa0108850 | Msa1159130 | 0.806284 | 8.864283e-50 | -8.615850e-47 |
| Msa0829620 | Msa1159130 | 0.802328 | 5.910015e-49 | -8.615850e-47 |
| Msa0144790 | Msa1159130 | 0.803564 | 3.282911e-49 | -8.615850e-47 |
| Msa0151950 | Msa1159130 | 0.802539 | 5.348170e-49 | -8.615850e-47 |
| Msa0165300 | Msa1159130 | 0.804446 | 2.151804e-49 | -8.615850e-47 |
| Msa0191250 | Msa1159130 | 0.805936 | 1.049343e-49 | -8.615850e-47 |
| Msa0200560 | Msa1159130 | 0.806923 | 6.498640e-50 | -8.615850e-47 |
| Msa0227230 | Msa1159130 | 0.808786 | 2.610090e-50 | -8.615850e-47 |
| Msa0377440 | Msa1159130 | 0.818377 | 2.023731e-52 | -8.615850e-47 |
| Msa0381000 | Msa1159130 | 0.802120 | 6.523855e-49 | -8.615850e-47 |
| Msa0390960 | Msa1159130 | 0.827627 | 1.409374e-54 | -8.615850e-47 |
| Msa0464900 | Msa1159130 | 0.830733 | 2.486270e-55 | -8.615850e-47 |
| Msa0981310 | Msa1159130 | 0.828206 | 1.022456e-54 | -8.615850e-47 |
| Msa1021510 | Msa1159130 | 0.802054 | 6.729802e-49 | -8.615850e-47 |
| Msa1031770 | Msa1159130 | 0.803320 | 3.687642e-49 | -8.615850e-47 |
| Msa1032170 | Msa1159130 | 0.891629 | 3.335826e-74 | -8.615850e-47 |
| Msa1040520 | Msa1159130 | 0.836038 | 1.182468e-56 | -8.615850e-47 |
| Msa1070840 | Msa1159130 | 0.801335 | 9.454290e-49 | -8.615850e-47 |
| Msa1080160 | Msa1159130 | 0.814231 | 1.711400e-51 | -8.615850e-47 |
| Msa1082500 | Msa1159130 | 0.800183 | 1.624312e-48 | -8.615850e-47 |
| Msa0260810 | Msa1159130 | 0.832429 | 9.503197e-56 | -8.615850e-47 |
| Msa0264780 | Msa1159130 | 0.805047 | 1.611897e-49 | -8.615850e-47 |
| Msa0276920 | Msa1159130 | 0.827994 | 1.150290e-54 | -8.615850e-47 |
| Msa0320800 | Msa1159130 | 0.803162 | 3.975681e-49 | -8.615850e-47 |
| Msa1127770 | Msa1159130 | 0.819719 | 1.001869e-52 | -8.615850e-47 |
| Msa1130270 | Msa1159130 | -0.808609 | 2.847206e-50 | -8.615850e-47 |
| Msa1133570 | Msa1159130 | 0.800855 | 1.184978e-48 | -8.615850e-47 |
| Msa1158660 | Msa1159130 | 0.806831 | 6.796793e-50 | -8.615850e-47 |
| Msa1159130 | Msa1174850 | 0.803180 | 3.942346e-49 | -8.615850e-47 |
| Msa1159130 | Msa1214880 | 0.840239 | 9.804106e-58 | -8.615850e-47 |
| Msa1159130 | Msa1219520 | 0.803805 | 2.925028e-49 | -8.615850e-47 |
| Msa1159130 | Msa1331920 | 0.824772 | 6.735785e-54 | -8.615850e-47 |
| Msa1159130 | Msa1338250 | 0.827006 | 1.984840e-54 | -8.615850e-47 |
| Msa1159130 | Msa1341570 | 0.808116 | 3.628094e-50 | -8.615850e-47 |
| Msa1159130 | Msa1404540 | 0.820001 | 8.635775e-53 | -8.615850e-47 |
| Msa1159130 | Msa1409350 | 0.801679 | 8.034312e-49 | -8.615850e-47 |
| Msa1159130 | Msa1410210 | 0.803300 | 3.724020e-49 | -8.615850e-47 |
| Msa1159130 | Msa1422840 | 0.810725 | 9.995142e-51 | -8.615850e-47 |
| Msa1159130 | Msa1431060 | 0.840048 | 1.099397e-57 | -8.615850e-47 |
| Msa1159130 | Msa1440600 | 0.819896 | 9.128452e-53 | -8.615850e-47 |
| Msa1159130 | Msa1457430 | 0.880965 | 3.552959e-70 | -8.615850e-47 |
| Msa0484780 | Msa1159130 | 0.832594 | 8.649705e-56 | -8.615850e-47 |
| Msa0517650 | Msa1159130 | 0.808354 | 3.227281e-50 | -8.615850e-47 |
| Msa0526940 | Msa1159130 | 0.825074 | 5.716217e-54 | -8.615850e-47 |
| Msa0572420 | Msa1159130 | 0.808993 | 2.357048e-50 | -8.615850e-47 |
| Msa0845070 | Msa1159130 | 0.803689 | 3.092664e-49 | -8.615850e-47 |
| Msa0882510 | Msa1159130 | 0.817120 | 3.888824e-52 | -8.615850e-47 |
| Msa0908170 | Msa1159130 | 0.842284 | 2.840797e-58 | -8.615850e-47 |
| Msa0927670 | Msa1159130 | 0.803274 | 3.769332e-49 | -8.615850e-47 |
| Msa0971090 | Msa1159130 | 0.803667 | 3.124540e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159130 | MtrunA17_Chr7g0254091 | 90.724 | 539 | 8 | 5 | 1 | 504 | 1 | 532 | 0.0 | 949 |
| Msa1159130 | MtrunA17_Chr6g0460821 | 65.242 | 351 | 111 | 4 | 153 | 503 | 238 | 577 | 6.88e-142 | 420 |
| Msa1159130 | MtrunA17_Chr6g0460821 | 51.250 | 160 | 56 | 2 | 12 | 152 | 10 | 166 | 7.28e-32 | 129 |
| Msa1159130 | MtrunA17_Chr6g0460831 | 47.278 | 349 | 166 | 6 | 156 | 498 | 250 | 586 | 3.15e-92 | 292 |
| Msa1159130 | MtrunA17_Chr6g0460831 | 50.595 | 168 | 59 | 4 | 5 | 151 | 12 | 176 | 8.56e-27 | 114 |
| Msa1159130 | MtrunA17_Chr8g0344371 | 53.175 | 252 | 115 | 2 | 244 | 495 | 398 | 646 | 9.11e-81 | 264 |
| Msa1159130 | MtrunA17_Chr8g0344371 | 61.728 | 81 | 31 | 0 | 71 | 151 | 125 | 205 | 1.22e-24 | 107 |
| Msa1159130 | MtrunA17_Chr7g0273001 | 34.127 | 252 | 132 | 7 | 208 | 436 | 217 | 457 | 3.46e-23 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159130 | AT5G17860.2 | 47.182 | 479 | 216 | 7 | 48 | 498 | 63 | 532 | 5.63e-131 | 391 |
| Msa1159130 | AT5G17850.1 | 52.011 | 348 | 149 | 9 | 153 | 498 | 228 | 559 | 1.08e-98 | 308 |
| Msa1159130 | AT5G17850.1 | 48.592 | 142 | 68 | 2 | 15 | 151 | 12 | 153 | 5.15e-14 | 75.1 |
| Msa1159130 | AT5G17850.2 | 52.011 | 348 | 149 | 9 | 153 | 498 | 228 | 559 | 1.08e-98 | 308 |
| Msa1159130 | AT5G17850.2 | 48.592 | 142 | 68 | 2 | 15 | 151 | 12 | 153 | 5.15e-14 | 75.1 |
| Msa1159130 | AT5G17860.1 | 47.075 | 359 | 170 | 6 | 144 | 498 | 225 | 567 | 2.44e-95 | 300 |
| Msa1159130 | AT5G17860.1 | 56.731 | 104 | 42 | 1 | 48 | 151 | 63 | 163 | 8.76e-29 | 120 |
| Msa1159130 | AT1G54115.1 | 49.421 | 259 | 128 | 2 | 237 | 495 | 383 | 638 | 8.55e-81 | 264 |
| Msa1159130 | AT1G54115.1 | 61.728 | 81 | 31 | 0 | 71 | 151 | 118 | 198 | 7.51e-24 | 105 |
| Msa1159130 | AT3G14070.1 | 50.579 | 259 | 125 | 2 | 237 | 495 | 382 | 637 | 6.71e-80 | 262 |
| Msa1159130 | AT3G14070.1 | 60.494 | 81 | 32 | 0 | 71 | 151 | 119 | 199 | 1.19e-23 | 105 |
| Msa1159130 | AT1G08960.1 | 34.322 | 236 | 123 | 8 | 221 | 436 | 262 | 485 | 1.37e-25 | 110 |
Find 85 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGGAAATTTCCCTTTAT+TGG | 0.076464 | 7_4:-48727820 | Msa1159130:CDS |
| ACTTGGTTCTCTTCAATTTA+AGG | 0.089846 | 7_4:-48726371 | Msa1159130:CDS |
| TCATCAAGCCTAATAGTTTA+TGG | 0.163623 | 7_4:-48726955 | Msa1159130:CDS |
| ATTGGTTCTCTTCTATCTTT+TGG | 0.181075 | 7_4:-48727772 | Msa1159130:CDS |
| AGTTTATGGAATTGGGTTAT+TGG | 0.209449 | 7_4:-48726941 | Msa1159130:CDS |
| AGCCTAATAGTTTATGGAAT+TGG | 0.211692 | 7_4:-48726949 | Msa1159130:CDS |
| AATTTAACAATGGCTTTAAA+TGG | 0.222751 | 7_4:-48726682 | Msa1159130:CDS |
| ACTTCATTTCTCTTATTCTT+AGG | 0.245806 | 7_4:-48726405 | Msa1159130:CDS |
| GCCAATGTCTCCCACAAATA+TGG | 0.253071 | 7_4:+48726523 | None:intergenic |
| TAGAATGTTACTTTATGTTT+TGG | 0.260934 | 7_4:-48727127 | Msa1159130:CDS |
| ATTGGAAATTTCCCTTTATT+GGG | 0.271619 | 7_4:-48727819 | Msa1159130:CDS |
| AACTATTAGGCTTGATGAAT+TGG | 0.277855 | 7_4:+48726960 | None:intergenic |
| TTATTGGTTGGAATAATATT+AGG | 0.290689 | 7_4:-48726925 | Msa1159130:CDS |
| ACCCAATTCCATAAACTATT+AGG | 0.299539 | 7_4:+48726947 | None:intergenic |
| AAAAGGGTATGACCCAATAA+AGG | 0.334456 | 7_4:+48727807 | None:intergenic |
| AGGCTTTCACCAACTATTGC+TGG | 0.335790 | 7_4:-48727693 | Msa1159130:CDS |
| GGGGCTCAAATAGCAATTTC+AGG | 0.338302 | 7_4:-48726649 | Msa1159130:CDS |
| AAAGTTTCTGTTATTATTGT+TGG | 0.338919 | 7_4:+48727983 | None:intergenic |
| GCCTAATAGTTTATGGAATT+GGG | 0.341474 | 7_4:-48726948 | Msa1159130:CDS |
| TTTGGTTGTTGGATTGATTT+GGG | 0.349011 | 7_4:-48726497 | Msa1159130:CDS |
| TTCAATACAGTTGTTGGATT+GGG | 0.352207 | 7_4:-48726607 | Msa1159130:CDS |
| ACTCTTCTCTCTCTTGGTAA+TGG | 0.355779 | 7_4:-48727666 | Msa1159130:CDS |
| GGTGTTACTCTTCTCTCTCT+TGG | 0.358714 | 7_4:-48727672 | Msa1159130:CDS |
| ATTTCAGCTCAAGAATTAGT+AGG | 0.359746 | 7_4:-48726802 | Msa1159130:CDS |
| CCTATCTTCAATACAGTTGT+TGG | 0.365242 | 7_4:-48726613 | Msa1159130:CDS |
| GATGAAGCTGAAAGTGATTA+TGG | 0.371129 | 7_4:-48727303 | Msa1159130:CDS |
| GTTTCACTTGGTTTCATATG+TGG | 0.378949 | 7_4:-48726772 | Msa1159130:CDS |
| GGTGTTAATCCTTCAATACT+TGG | 0.389771 | 7_4:-48726751 | Msa1159130:CDS |
| GATTTAGATGTTCCTCTACT+TGG | 0.392499 | 7_4:-48727252 | Msa1159130:CDS |
| CTTCAATACAGTTGTTGGAT+TGG | 0.393064 | 7_4:-48726608 | Msa1159130:CDS |
| TTGTTACCATGGCTAGCTGC+AGG | 0.398686 | 7_4:-48726853 | Msa1159130:CDS |
| TGGATTAACAGTACTTGCTT+GGG | 0.408172 | 7_4:-48726731 | Msa1159130:CDS |
| TATCTCTTGTTACATCTACT+TGG | 0.418938 | 7_4:-48726582 | Msa1159130:CDS |
| TTTCCTTTGGATTCCATACA+AGG | 0.420611 | 7_4:-48726995 | Msa1159130:CDS |
| ACTGTTAATCCAAGTATTGA+AGG | 0.428915 | 7_4:+48726742 | None:intergenic |
| TATGGTGATTCAAGAATTCA+TGG | 0.430378 | 7_4:-48727285 | Msa1159130:CDS |
| CCAACAACTGTATTGAAGAT+AGG | 0.432471 | 7_4:+48726613 | None:intergenic |
| GCAATTTCAGGTTGTTATGC+TGG | 0.432764 | 7_4:-48726637 | Msa1159130:CDS |
| TTGGATTAACAGTACTTGCT+TGG | 0.435057 | 7_4:-48726732 | Msa1159130:CDS |
| TATGGAATTGGGTTATTGGT+TGG | 0.441874 | 7_4:-48726937 | Msa1159130:CDS |
| ATGGTTCATAACAATTCAAA+TGG | 0.445885 | 7_4:-48727213 | Msa1159130:CDS |
| CCAATAACCATAGAAACAAA+AGG | 0.447694 | 7_4:+48727790 | None:intergenic |
| AATAACAGAAACTTTGTCTC+TGG | 0.459319 | 7_4:-48727975 | Msa1159130:CDS |
| GCCACACTTGTTTCTTTCAA+AGG | 0.465678 | 7_4:-48727627 | Msa1159130:intron |
| TGGTGAAAGCCTCAAAACTT+TGG | 0.469895 | 7_4:+48727704 | None:intergenic |
| TCCATATTTGTGGGAGACAT+TGG | 0.474566 | 7_4:-48726524 | Msa1159130:CDS |
| CTAGGAATCACAATAGATGA+AGG | 0.475246 | 7_4:+48726550 | None:intergenic |
| CTTAGGCTTACTCAAACACT+TGG | 0.475303 | 7_4:-48726388 | Msa1159130:CDS |
| AGAAAAGGTGTTTGTGATGA+AGG | 0.475574 | 7_4:-48727333 | Msa1159130:CDS |
| AAAGGGTATGACCCAATAAA+GGG | 0.479389 | 7_4:+48727808 | None:intergenic |
| AAGTAACATTCTACATATTG+AGG | 0.479550 | 7_4:+48727137 | None:intergenic |
| ACAGGAATTGTTAATCTCCT+AGG | 0.480184 | 7_4:+48727087 | None:intergenic |
| GCTTTAAATGGTGGGCCAGA+GGG | 0.482620 | 7_4:-48726670 | Msa1159130:CDS |
| ATGAAGCTTGATGCAATGTT+AGG | 0.498376 | 7_4:-48726448 | Msa1159130:CDS |
| TAACAATGGCTTTAAATGGT+GGG | 0.499024 | 7_4:-48726678 | Msa1159130:CDS |
| GTCACATCTAGCAAAAGAAA+AGG | 0.510055 | 7_4:-48727348 | Msa1159130:CDS |
| TTAACAATGGCTTTAAATGG+TGG | 0.512871 | 7_4:-48726679 | Msa1159130:CDS |
| ATATGCCTCTTTACTTGCCT+AGG | 0.517052 | 7_4:-48727104 | Msa1159130:CDS |
| TCCCACAAATATGGATCTCT+AGG | 0.518786 | 7_4:+48726532 | None:intergenic |
| TTTCAGCTCAAGAATTAGTA+GGG | 0.519227 | 7_4:-48726801 | Msa1159130:CDS |
| GTAGGGTTGTTAGTTTCACT+TGG | 0.521163 | 7_4:-48726784 | Msa1159130:CDS |
| TTTAAATGGTGGGCCAGAGG+GGG | 0.522665 | 7_4:-48726668 | Msa1159130:CDS |
| TGTTACCATGGCTAGCTGCA+GGG | 0.525417 | 7_4:-48726852 | Msa1159130:CDS |
| TTCCTAGAGATCCATATTTG+TGG | 0.525439 | 7_4:-48726534 | Msa1159130:CDS |
| CAAAGGAAAGCTAATAAAAG+TGG | 0.528694 | 7_4:+48727009 | None:intergenic |
| TCCTAGAGATCCATATTTGT+GGG | 0.531471 | 7_4:-48726533 | Msa1159130:CDS |
| CTCTGGTGTCACTGATGATG+AGG | 0.535420 | 7_4:-48727958 | Msa1159130:CDS |
| GGCTTTAAATGGTGGGCCAG+AGG | 0.537518 | 7_4:-48726671 | Msa1159130:CDS |
| CAAGAAAATTCTTGTTACCA+TGG | 0.539455 | 7_4:-48726864 | Msa1159130:CDS |
| AGAGTAACACCAGCAATAGT+TGG | 0.546124 | 7_4:+48727684 | None:intergenic |
| TTGGAGAGATTATCAAGAGA+AGG | 0.561396 | 7_4:+48727723 | None:intergenic |
| CAATAACCATAGAAACAAAA+GGG | 0.563756 | 7_4:+48727791 | None:intergenic |
| GGATTAACAGTACTTGCTTG+GGG | 0.569748 | 7_4:-48726730 | Msa1159130:CDS |
| CTTTAAATGGTGGGCCAGAG+GGG | 0.577285 | 7_4:-48726669 | Msa1159130:CDS |
| TTTCCTTGTATGGAATCCAA+AGG | 0.578564 | 7_4:+48726992 | None:intergenic |
| CTTGATGCAATGTTAGGTGG+AGG | 0.588704 | 7_4:-48726442 | Msa1159130:CDS |
| TTTAGTGACTAATTTAACAA+TGG | 0.604981 | 7_4:-48726692 | Msa1159130:CDS |
| AATCTCCTAGGCAAGTAAAG+AGG | 0.606669 | 7_4:+48727099 | None:intergenic |
| ACAAACCCTGCAGCTAGCCA+TGG | 0.621070 | 7_4:+48726847 | None:intergenic |
| AAGCTTGATGCAATGTTAGG+TGG | 0.631062 | 7_4:-48726445 | Msa1159130:CDS |
| TAGGAATCACAATAGATGAA+GGG | 0.638422 | 7_4:+48726551 | None:intergenic |
| GATTAACAGTACTTGCTTGG+GGG | 0.639126 | 7_4:-48726729 | Msa1159130:CDS |
| ACCTTTGAAAGAAACAAGTG+TGG | 0.657131 | 7_4:+48727626 | None:intergenic |
| TTCTCCATAAAACCAAGTAG+AGG | 0.658159 | 7_4:+48727240 | None:intergenic |
| GGTTTGTGATGAGTGTGACA+TGG | 0.672642 | 7_4:-48726831 | Msa1159130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTTTCTGTTATTATTGT+TGG | + | chr7_4:48726496-48726515 | None:intergenic | 20.0% |
| !!! | TTTTGCAATAGAAAATGTAA+AGG | + | chr7_4:48726638-48726657 | None:intergenic | 20.0% |
| !!! | TACATTTTCTATTGCAAAAT+TGG | - | chr7_4:48726639-48726658 | Msa1159130:CDS | 20.0% |
| !!! | TAGAATGTTACTTTATGTTT+TGG | - | chr7_4:48727349-48727368 | Msa1159130:CDS | 20.0% |
| !!! | TTATTGGTTGGAATAATATT+AGG | - | chr7_4:48727551-48727570 | Msa1159130:intron | 20.0% |
| !! | TTTAGTGACTAATTTAACAA+TGG | - | chr7_4:48727784-48727803 | Msa1159130:CDS | 20.0% |
| !!! | AATTTAACAATGGCTTTAAA+TGG | - | chr7_4:48727794-48727813 | Msa1159130:CDS | 20.0% |
| !! | AAAGTTTCTGTTATTATTGT+TGG | + | chr7_4:48726496-48726515 | None:intergenic | 20.0% |
| !!! | TTTTGCAATAGAAAATGTAA+AGG | + | chr7_4:48726638-48726657 | None:intergenic | 20.0% |
| !!! | TACATTTTCTATTGCAAAAT+TGG | - | chr7_4:48726639-48726658 | Msa1159130:CDS | 20.0% |
| !!! | TAGAATGTTACTTTATGTTT+TGG | - | chr7_4:48727349-48727368 | Msa1159130:CDS | 20.0% |
| !!! | TTATTGGTTGGAATAATATT+AGG | - | chr7_4:48727551-48727570 | Msa1159130:intron | 20.0% |
| !! | TTTAGTGACTAATTTAACAA+TGG | - | chr7_4:48727784-48727803 | Msa1159130:CDS | 20.0% |
| !!! | AATTTAACAATGGCTTTAAA+TGG | - | chr7_4:48727794-48727813 | Msa1159130:CDS | 20.0% |
| ! | GAAAAACACAAAACAACAAA+AGG | + | chr7_4:48726419-48726438 | None:intergenic | 25.0% |
| ! | AATTGGAAATTTCCCTTTAT+TGG | - | chr7_4:48726656-48726675 | Msa1159130:CDS | 25.0% |
| ! | ATTGGAAATTTCCCTTTATT+GGG | - | chr7_4:48726657-48726676 | Msa1159130:CDS | 25.0% |
| ! | CAATAACCATAGAAACAAAA+GGG | + | chr7_4:48726688-48726707 | None:intergenic | 25.0% |
| !! | TTGTTTCTTTCAAAGGTAAT+GGG | - | chr7_4:48726856-48726875 | Msa1159130:CDS | 25.0% |
| !! | TTTATTTCATGTGTTGTTGT+GGG | - | chr7_4:48726921-48726940 | Msa1159130:CDS | 25.0% |
| ! | ATGGTTCATAACAATTCAAA+TGG | - | chr7_4:48727263-48727282 | Msa1159130:CDS | 25.0% |
| ! | AAGTAACATTCTACATATTG+AGG | + | chr7_4:48727342-48727361 | None:intergenic | 25.0% |
| ! | ACTTCATTTCTCTTATTCTT+AGG | - | chr7_4:48728071-48728090 | Msa1159130:CDS | 25.0% |
| ! | GAAAAACACAAAACAACAAA+AGG | + | chr7_4:48726419-48726438 | None:intergenic | 25.0% |
| ! | AATTGGAAATTTCCCTTTAT+TGG | - | chr7_4:48726656-48726675 | Msa1159130:CDS | 25.0% |
| ! | ATTGGAAATTTCCCTTTATT+GGG | - | chr7_4:48726657-48726676 | Msa1159130:CDS | 25.0% |
| ! | CAATAACCATAGAAACAAAA+GGG | + | chr7_4:48726688-48726707 | None:intergenic | 25.0% |
| !! | TTGTTTCTTTCAAAGGTAAT+GGG | - | chr7_4:48726856-48726875 | Msa1159130:CDS | 25.0% |
| !! | TTTATTTCATGTGTTGTTGT+GGG | - | chr7_4:48726921-48726940 | Msa1159130:CDS | 25.0% |
| ! | ATGGTTCATAACAATTCAAA+TGG | - | chr7_4:48727263-48727282 | Msa1159130:CDS | 25.0% |
| ! | AAGTAACATTCTACATATTG+AGG | + | chr7_4:48727342-48727361 | None:intergenic | 25.0% |
| ! | ACTTCATTTCTCTTATTCTT+AGG | - | chr7_4:48728071-48728090 | Msa1159130:CDS | 25.0% |
| AATAACAGAAACTTTGTCTC+TGG | - | chr7_4:48726501-48726520 | Msa1159130:CDS | 30.0% | |
| CCAATAACCATAGAAACAAA+AGG | + | chr7_4:48726689-48726708 | None:intergenic | 30.0% | |
| !!! | CCTTTTGTTTCTATGGTTAT+TGG | - | chr7_4:48726686-48726705 | Msa1159130:CDS | 30.0% |
| !! | ATTGGTTCTCTTCTATCTTT+TGG | - | chr7_4:48726704-48726723 | Msa1159130:CDS | 30.0% |
| ! | ATAATCTCTCCAAAGTTTTG+AGG | - | chr7_4:48726763-48726782 | Msa1159130:CDS | 30.0% |
| ! | CTTGTTTCTTTCAAAGGTAA+TGG | - | chr7_4:48726855-48726874 | Msa1159130:CDS | 30.0% |
| CACAACAACACATGAAATAA+AGG | + | chr7_4:48726922-48726941 | None:intergenic | 30.0% | |
| ! | CTTTATTTCATGTGTTGTTG+TGG | - | chr7_4:48726920-48726939 | Msa1159130:CDS | 30.0% |
| !! | TGGTTTTTGTTTGATGTATG+TGG | - | chr7_4:48727085-48727104 | Msa1159130:CDS | 30.0% |
| TATGGTGATTCAAGAATTCA+TGG | - | chr7_4:48727191-48727210 | Msa1159130:CDS | 30.0% | |
| ! | CATTTTTCTTCACAAACAAC+AGG | + | chr7_4:48727410-48727429 | None:intergenic | 30.0% |
| ! | CTGTTGTTTGTGAAGAAAAA+TGG | - | chr7_4:48727408-48727427 | Msa1159130:intron | 30.0% |
| CAAAGGAAAGCTAATAAAAG+TGG | + | chr7_4:48727470-48727489 | None:intergenic | 30.0% | |
| !!! | CACTTTTATTAGCTTTCCTT+TGG | - | chr7_4:48727468-48727487 | Msa1159130:intron | 30.0% |
| AACTATTAGGCTTGATGAAT+TGG | + | chr7_4:48727519-48727538 | None:intergenic | 30.0% | |
| TCATCAAGCCTAATAGTTTA+TGG | - | chr7_4:48727521-48727540 | Msa1159130:intron | 30.0% | |
| AGCCTAATAGTTTATGGAAT+TGG | - | chr7_4:48727527-48727546 | Msa1159130:intron | 30.0% | |
| GCCTAATAGTTTATGGAATT+GGG | - | chr7_4:48727528-48727547 | Msa1159130:intron | 30.0% | |
| ACCCAATTCCATAAACTATT+AGG | + | chr7_4:48727532-48727551 | None:intergenic | 30.0% | |
| AGTTTATGGAATTGGGTTAT+TGG | - | chr7_4:48727535-48727554 | Msa1159130:intron | 30.0% | |
| ! | AACAACAATTTTCACAACTG+AGG | - | chr7_4:48727577-48727596 | Msa1159130:intron | 30.0% |
| ! | CATGGTAACAAGAATTTTCT+TGG | + | chr7_4:48727614-48727633 | None:intergenic | 30.0% |
| CAAGAAAATTCTTGTTACCA+TGG | - | chr7_4:48727612-48727631 | Msa1159130:intron | 30.0% | |
| ATTTCAGCTCAAGAATTAGT+AGG | - | chr7_4:48727674-48727693 | Msa1159130:CDS | 30.0% | |
| TTTCAGCTCAAGAATTAGTA+GGG | - | chr7_4:48727675-48727694 | Msa1159130:CDS | 30.0% | |
| !! | ACTGTTAATCCAAGTATTGA+AGG | + | chr7_4:48727737-48727756 | None:intergenic | 30.0% |
| !! | TTAACAATGGCTTTAAATGG+TGG | - | chr7_4:48727797-48727816 | Msa1159130:CDS | 30.0% |
| !! | TAACAATGGCTTTAAATGGT+GGG | - | chr7_4:48727798-48727817 | Msa1159130:CDS | 30.0% |
| TTCAATACAGTTGTTGGATT+GGG | - | chr7_4:48727869-48727888 | Msa1159130:intron | 30.0% | |
| TATCTCTTGTTACATCTACT+TGG | - | chr7_4:48727894-48727913 | Msa1159130:intron | 30.0% | |
| TAGGAATCACAATAGATGAA+GGG | + | chr7_4:48727928-48727947 | None:intergenic | 30.0% | |
| !! | TTTTGGTTGTTGGATTGATT+TGG | - | chr7_4:48727978-48727997 | Msa1159130:CDS | 30.0% |
| ! | TTTGGTTGTTGGATTGATTT+GGG | - | chr7_4:48727979-48727998 | Msa1159130:CDS | 30.0% |
| ! | ACTTGGTTCTCTTCAATTTA+AGG | - | chr7_4:48728105-48728124 | Msa1159130:CDS | 30.0% |
| AATAACAGAAACTTTGTCTC+TGG | - | chr7_4:48726501-48726520 | Msa1159130:CDS | 30.0% | |
| CCAATAACCATAGAAACAAA+AGG | + | chr7_4:48726689-48726708 | None:intergenic | 30.0% | |
| !!! | CCTTTTGTTTCTATGGTTAT+TGG | - | chr7_4:48726686-48726705 | Msa1159130:CDS | 30.0% |
| !! | ATTGGTTCTCTTCTATCTTT+TGG | - | chr7_4:48726704-48726723 | Msa1159130:CDS | 30.0% |
| ! | ATAATCTCTCCAAAGTTTTG+AGG | - | chr7_4:48726763-48726782 | Msa1159130:CDS | 30.0% |
| ! | CTTGTTTCTTTCAAAGGTAA+TGG | - | chr7_4:48726855-48726874 | Msa1159130:CDS | 30.0% |
| CACAACAACACATGAAATAA+AGG | + | chr7_4:48726922-48726941 | None:intergenic | 30.0% | |
| ! | CTTTATTTCATGTGTTGTTG+TGG | - | chr7_4:48726920-48726939 | Msa1159130:CDS | 30.0% |
| !! | TGGTTTTTGTTTGATGTATG+TGG | - | chr7_4:48727085-48727104 | Msa1159130:CDS | 30.0% |
| TATGGTGATTCAAGAATTCA+TGG | - | chr7_4:48727191-48727210 | Msa1159130:CDS | 30.0% | |
| ! | CATTTTTCTTCACAAACAAC+AGG | + | chr7_4:48727410-48727429 | None:intergenic | 30.0% |
| ! | CTGTTGTTTGTGAAGAAAAA+TGG | - | chr7_4:48727408-48727427 | Msa1159130:intron | 30.0% |
| CAAAGGAAAGCTAATAAAAG+TGG | + | chr7_4:48727470-48727489 | None:intergenic | 30.0% | |
| !!! | CACTTTTATTAGCTTTCCTT+TGG | - | chr7_4:48727468-48727487 | Msa1159130:intron | 30.0% |
| AACTATTAGGCTTGATGAAT+TGG | + | chr7_4:48727519-48727538 | None:intergenic | 30.0% | |
| TCATCAAGCCTAATAGTTTA+TGG | - | chr7_4:48727521-48727540 | Msa1159130:intron | 30.0% | |
| AGCCTAATAGTTTATGGAAT+TGG | - | chr7_4:48727527-48727546 | Msa1159130:intron | 30.0% | |
| GCCTAATAGTTTATGGAATT+GGG | - | chr7_4:48727528-48727547 | Msa1159130:intron | 30.0% | |
| ACCCAATTCCATAAACTATT+AGG | + | chr7_4:48727532-48727551 | None:intergenic | 30.0% | |
| AGTTTATGGAATTGGGTTAT+TGG | - | chr7_4:48727535-48727554 | Msa1159130:intron | 30.0% | |
| ! | AACAACAATTTTCACAACTG+AGG | - | chr7_4:48727577-48727596 | Msa1159130:intron | 30.0% |
| ! | CATGGTAACAAGAATTTTCT+TGG | + | chr7_4:48727614-48727633 | None:intergenic | 30.0% |
| CAAGAAAATTCTTGTTACCA+TGG | - | chr7_4:48727612-48727631 | Msa1159130:intron | 30.0% | |
| ATTTCAGCTCAAGAATTAGT+AGG | - | chr7_4:48727674-48727693 | Msa1159130:CDS | 30.0% | |
| TTTCAGCTCAAGAATTAGTA+GGG | - | chr7_4:48727675-48727694 | Msa1159130:CDS | 30.0% | |
| !! | ACTGTTAATCCAAGTATTGA+AGG | + | chr7_4:48727737-48727756 | None:intergenic | 30.0% |
| !! | TTAACAATGGCTTTAAATGG+TGG | - | chr7_4:48727797-48727816 | Msa1159130:CDS | 30.0% |
| !! | TAACAATGGCTTTAAATGGT+GGG | - | chr7_4:48727798-48727817 | Msa1159130:CDS | 30.0% |
| TTCAATACAGTTGTTGGATT+GGG | - | chr7_4:48727869-48727888 | Msa1159130:intron | 30.0% | |
| TATCTCTTGTTACATCTACT+TGG | - | chr7_4:48727894-48727913 | Msa1159130:intron | 30.0% | |
| TAGGAATCACAATAGATGAA+GGG | + | chr7_4:48727928-48727947 | None:intergenic | 30.0% | |
| !! | TTTTGGTTGTTGGATTGATT+TGG | - | chr7_4:48727978-48727997 | Msa1159130:CDS | 30.0% |
| ! | TTTGGTTGTTGGATTGATTT+GGG | - | chr7_4:48727979-48727998 | Msa1159130:CDS | 30.0% |
| ! | ACTTGGTTCTCTTCAATTTA+AGG | - | chr7_4:48728105-48728124 | Msa1159130:CDS | 30.0% |
| TCTGAGAAAAACGTGTTCAT+AGG | + | chr7_4:48726460-48726479 | None:intergenic | 35.0% | |
| ! | CACAAGGGTTGTTTGATTTA+AGG | + | chr7_4:48726593-48726612 | None:intergenic | 35.0% |
| ! | AAAGGGTATGACCCAATAAA+GGG | + | chr7_4:48726671-48726690 | None:intergenic | 35.0% |
| ! | AAAAGGGTATGACCCAATAA+AGG | + | chr7_4:48726672-48726691 | None:intergenic | 35.0% |
| !!! | GTCATACCCTTTTGTTTCTA+TGG | - | chr7_4:48726679-48726698 | Msa1159130:CDS | 35.0% |
| TTGGAGAGATTATCAAGAGA+AGG | + | chr7_4:48726756-48726775 | None:intergenic | 35.0% | |
| ! | ACCTTTGAAAGAAACAAGTG+TGG | + | chr7_4:48726853-48726872 | None:intergenic | 35.0% |
| ATTGGATTCAACACTGTTCT+TGG | - | chr7_4:48726888-48726907 | Msa1159130:CDS | 35.0% | |
| TTGTTGAGTGTCTTCATCAA+TGG | - | chr7_4:48727038-48727057 | Msa1159130:CDS | 35.0% | |
| TGGTGAAATCAATGTTGTTG+TGG | - | chr7_4:48727058-48727077 | Msa1159130:CDS | 35.0% | |
| GTCACATCTAGCAAAAGAAA+AGG | - | chr7_4:48727128-48727147 | Msa1159130:CDS | 35.0% | |
| !! | AGAAAAGGTGTTTGTGATGA+AGG | - | chr7_4:48727143-48727162 | Msa1159130:CDS | 35.0% |
| GATGAAGCTGAAAGTGATTA+TGG | - | chr7_4:48727173-48727192 | Msa1159130:CDS | 35.0% | |
| GATTTAGATGTTCCTCTACT+TGG | - | chr7_4:48727224-48727243 | Msa1159130:CDS | 35.0% | |
| !!! | TGTTCCTCTACTTGGTTTTA+TGG | - | chr7_4:48727232-48727251 | Msa1159130:CDS | 35.0% |
| TTCTCCATAAAACCAAGTAG+AGG | + | chr7_4:48727239-48727258 | None:intergenic | 35.0% | |
| !!! | TCTACTTGGTTTTATGGAGA+AGG | - | chr7_4:48727238-48727257 | Msa1159130:CDS | 35.0% |
| !!! | CTACTTGGTTTTATGGAGAA+GGG | - | chr7_4:48727239-48727258 | Msa1159130:CDS | 35.0% |
| ACAGGAATTGTTAATCTCCT+AGG | + | chr7_4:48727392-48727411 | None:intergenic | 35.0% | |
| TTTCCTTTGGATTCCATACA+AGG | - | chr7_4:48727481-48727500 | Msa1159130:intron | 35.0% | |
| TTTCCTTGTATGGAATCCAA+AGG | + | chr7_4:48727487-48727506 | None:intergenic | 35.0% | |
| ! | GAGAAACTGTTTTCCTTGTA+TGG | + | chr7_4:48727497-48727516 | None:intergenic | 35.0% |
| TATGGAATTGGGTTATTGGT+TGG | - | chr7_4:48727539-48727558 | Msa1159130:intron | 35.0% | |
| ! | GGTAACAAGAATTTTCTTGG+AGG | + | chr7_4:48727611-48727630 | None:intergenic | 35.0% |
| GTTTCACTTGGTTTCATATG+TGG | - | chr7_4:48727704-48727723 | Msa1159130:CDS | 35.0% | |
| GGTGTTAATCCTTCAATACT+TGG | - | chr7_4:48727725-48727744 | Msa1159130:CDS | 35.0% | |
| TTGGATTAACAGTACTTGCT+TGG | - | chr7_4:48727744-48727763 | Msa1159130:CDS | 35.0% | |
| TGGATTAACAGTACTTGCTT+GGG | - | chr7_4:48727745-48727764 | Msa1159130:CDS | 35.0% | |
| CCAACAACTGTATTGAAGAT+AGG | + | chr7_4:48727866-48727885 | None:intergenic | 35.0% | |
| CCTATCTTCAATACAGTTGT+TGG | - | chr7_4:48727863-48727882 | Msa1159130:intron | 35.0% | |
| CTTCAATACAGTTGTTGGAT+TGG | - | chr7_4:48727868-48727887 | Msa1159130:intron | 35.0% | |
| CTAGGAATCACAATAGATGA+AGG | + | chr7_4:48727929-48727948 | None:intergenic | 35.0% | |
| TTCCTAGAGATCCATATTTG+TGG | - | chr7_4:48727942-48727961 | Msa1159130:CDS | 35.0% | |
| TCCTAGAGATCCATATTTGT+GGG | - | chr7_4:48727943-48727962 | Msa1159130:CDS | 35.0% | |
| !!! | ACATTGGCATTTTTGGTTGT+TGG | - | chr7_4:48727968-48727987 | Msa1159130:CDS | 35.0% |
| ATGAAGCTTGATGCAATGTT+AGG | - | chr7_4:48728028-48728047 | Msa1159130:CDS | 35.0% | |
| TCTGAGAAAAACGTGTTCAT+AGG | + | chr7_4:48726460-48726479 | None:intergenic | 35.0% | |
| ! | CACAAGGGTTGTTTGATTTA+AGG | + | chr7_4:48726593-48726612 | None:intergenic | 35.0% |
| ! | AAAGGGTATGACCCAATAAA+GGG | + | chr7_4:48726671-48726690 | None:intergenic | 35.0% |
| ! | AAAAGGGTATGACCCAATAA+AGG | + | chr7_4:48726672-48726691 | None:intergenic | 35.0% |
| !!! | GTCATACCCTTTTGTTTCTA+TGG | - | chr7_4:48726679-48726698 | Msa1159130:CDS | 35.0% |
| TTGGAGAGATTATCAAGAGA+AGG | + | chr7_4:48726756-48726775 | None:intergenic | 35.0% | |
| ! | ACCTTTGAAAGAAACAAGTG+TGG | + | chr7_4:48726853-48726872 | None:intergenic | 35.0% |
| ATTGGATTCAACACTGTTCT+TGG | - | chr7_4:48726888-48726907 | Msa1159130:CDS | 35.0% | |
| TTGTTGAGTGTCTTCATCAA+TGG | - | chr7_4:48727038-48727057 | Msa1159130:CDS | 35.0% | |
| TGGTGAAATCAATGTTGTTG+TGG | - | chr7_4:48727058-48727077 | Msa1159130:CDS | 35.0% | |
| GTCACATCTAGCAAAAGAAA+AGG | - | chr7_4:48727128-48727147 | Msa1159130:CDS | 35.0% | |
| !! | AGAAAAGGTGTTTGTGATGA+AGG | - | chr7_4:48727143-48727162 | Msa1159130:CDS | 35.0% |
| GATGAAGCTGAAAGTGATTA+TGG | - | chr7_4:48727173-48727192 | Msa1159130:CDS | 35.0% | |
| GATTTAGATGTTCCTCTACT+TGG | - | chr7_4:48727224-48727243 | Msa1159130:CDS | 35.0% | |
| !!! | TGTTCCTCTACTTGGTTTTA+TGG | - | chr7_4:48727232-48727251 | Msa1159130:CDS | 35.0% |
| TTCTCCATAAAACCAAGTAG+AGG | + | chr7_4:48727239-48727258 | None:intergenic | 35.0% | |
| !!! | TCTACTTGGTTTTATGGAGA+AGG | - | chr7_4:48727238-48727257 | Msa1159130:CDS | 35.0% |
| !!! | CTACTTGGTTTTATGGAGAA+GGG | - | chr7_4:48727239-48727258 | Msa1159130:CDS | 35.0% |
| ACAGGAATTGTTAATCTCCT+AGG | + | chr7_4:48727392-48727411 | None:intergenic | 35.0% | |
| TTTCCTTTGGATTCCATACA+AGG | - | chr7_4:48727481-48727500 | Msa1159130:intron | 35.0% | |
| TTTCCTTGTATGGAATCCAA+AGG | + | chr7_4:48727487-48727506 | None:intergenic | 35.0% | |
| ! | GAGAAACTGTTTTCCTTGTA+TGG | + | chr7_4:48727497-48727516 | None:intergenic | 35.0% |
| TATGGAATTGGGTTATTGGT+TGG | - | chr7_4:48727539-48727558 | Msa1159130:intron | 35.0% | |
| ! | GGTAACAAGAATTTTCTTGG+AGG | + | chr7_4:48727611-48727630 | None:intergenic | 35.0% |
| GTTTCACTTGGTTTCATATG+TGG | - | chr7_4:48727704-48727723 | Msa1159130:CDS | 35.0% | |
| GGTGTTAATCCTTCAATACT+TGG | - | chr7_4:48727725-48727744 | Msa1159130:CDS | 35.0% | |
| TTGGATTAACAGTACTTGCT+TGG | - | chr7_4:48727744-48727763 | Msa1159130:CDS | 35.0% | |
| TGGATTAACAGTACTTGCTT+GGG | - | chr7_4:48727745-48727764 | Msa1159130:CDS | 35.0% | |
| CCAACAACTGTATTGAAGAT+AGG | + | chr7_4:48727866-48727885 | None:intergenic | 35.0% | |
| CCTATCTTCAATACAGTTGT+TGG | - | chr7_4:48727863-48727882 | Msa1159130:intron | 35.0% | |
| CTTCAATACAGTTGTTGGAT+TGG | - | chr7_4:48727868-48727887 | Msa1159130:intron | 35.0% | |
| CTAGGAATCACAATAGATGA+AGG | + | chr7_4:48727929-48727948 | None:intergenic | 35.0% | |
| TTCCTAGAGATCCATATTTG+TGG | - | chr7_4:48727942-48727961 | Msa1159130:CDS | 35.0% | |
| TCCTAGAGATCCATATTTGT+GGG | - | chr7_4:48727943-48727962 | Msa1159130:CDS | 35.0% | |
| !!! | ACATTGGCATTTTTGGTTGT+TGG | - | chr7_4:48727968-48727987 | Msa1159130:CDS | 35.0% |
| ATGAAGCTTGATGCAATGTT+AGG | - | chr7_4:48728028-48728047 | Msa1159130:CDS | 35.0% | |
| CAGAGTGAAAAACATGCGTT+TGG | + | chr7_4:48726379-48726398 | None:intergenic | 40.0% | |
| TGGTGAAAGCCTCAAAACTT+TGG | + | chr7_4:48726775-48726794 | None:intergenic | 40.0% | |
| AGAGTAACACCAGCAATAGT+TGG | + | chr7_4:48726795-48726814 | None:intergenic | 40.0% | |
| ACTCTTCTCTCTCTTGGTAA+TGG | - | chr7_4:48726810-48726829 | Msa1159130:CDS | 40.0% | |
| ! | GCCACACTTGTTTCTTTCAA+AGG | - | chr7_4:48726849-48726868 | Msa1159130:CDS | 40.0% |
| !! | TTCAAAGGTAATGGGACACA+AGG | - | chr7_4:48726864-48726883 | Msa1159130:CDS | 40.0% |
| ATCAATGTTGTTGTGGCAGT+TGG | - | chr7_4:48727065-48727084 | Msa1159130:CDS | 40.0% | |
| !!! | TGGTTTTATGGAGAAGGGAA+TGG | - | chr7_4:48727244-48727263 | Msa1159130:CDS | 40.0% |
| ATATGCCTCTTTACTTGCCT+AGG | - | chr7_4:48727372-48727391 | Msa1159130:CDS | 40.0% | |
| AATCTCCTAGGCAAGTAAAG+AGG | + | chr7_4:48727380-48727399 | None:intergenic | 40.0% | |
| ! | GTAGGGTTGTTAGTTTCACT+TGG | - | chr7_4:48727692-48727711 | Msa1159130:CDS | 40.0% |
| GGATTAACAGTACTTGCTTG+GGG | - | chr7_4:48727746-48727765 | Msa1159130:CDS | 40.0% | |
| GATTAACAGTACTTGCTTGG+GGG | - | chr7_4:48727747-48727766 | Msa1159130:CDS | 40.0% | |
| !! | GCAATTTCAGGTTGTTATGC+TGG | - | chr7_4:48727839-48727858 | Msa1159130:CDS | 40.0% |
| TCCCACAAATATGGATCTCT+AGG | + | chr7_4:48727947-48727966 | None:intergenic | 40.0% | |
| TCCATATTTGTGGGAGACAT+TGG | - | chr7_4:48727952-48727971 | Msa1159130:CDS | 40.0% | |
| AAGCTTGATGCAATGTTAGG+TGG | - | chr7_4:48728031-48728050 | Msa1159130:CDS | 40.0% | |
| CTTAGGCTTACTCAAACACT+TGG | - | chr7_4:48728088-48728107 | Msa1159130:CDS | 40.0% | |
| CAGAGTGAAAAACATGCGTT+TGG | + | chr7_4:48726379-48726398 | None:intergenic | 40.0% | |
| TGGTGAAAGCCTCAAAACTT+TGG | + | chr7_4:48726775-48726794 | None:intergenic | 40.0% | |
| AGAGTAACACCAGCAATAGT+TGG | + | chr7_4:48726795-48726814 | None:intergenic | 40.0% | |
| ACTCTTCTCTCTCTTGGTAA+TGG | - | chr7_4:48726810-48726829 | Msa1159130:CDS | 40.0% | |
| ! | GCCACACTTGTTTCTTTCAA+AGG | - | chr7_4:48726849-48726868 | Msa1159130:CDS | 40.0% |
| !! | TTCAAAGGTAATGGGACACA+AGG | - | chr7_4:48726864-48726883 | Msa1159130:CDS | 40.0% |
| ATCAATGTTGTTGTGGCAGT+TGG | - | chr7_4:48727065-48727084 | Msa1159130:CDS | 40.0% | |
| !!! | TGGTTTTATGGAGAAGGGAA+TGG | - | chr7_4:48727244-48727263 | Msa1159130:CDS | 40.0% |
| ATATGCCTCTTTACTTGCCT+AGG | - | chr7_4:48727372-48727391 | Msa1159130:CDS | 40.0% | |
| AATCTCCTAGGCAAGTAAAG+AGG | + | chr7_4:48727380-48727399 | None:intergenic | 40.0% | |
| ! | GTAGGGTTGTTAGTTTCACT+TGG | - | chr7_4:48727692-48727711 | Msa1159130:CDS | 40.0% |
| GGATTAACAGTACTTGCTTG+GGG | - | chr7_4:48727746-48727765 | Msa1159130:CDS | 40.0% | |
| GATTAACAGTACTTGCTTGG+GGG | - | chr7_4:48727747-48727766 | Msa1159130:CDS | 40.0% | |
| !! | GCAATTTCAGGTTGTTATGC+TGG | - | chr7_4:48727839-48727858 | Msa1159130:CDS | 40.0% |
| TCCCACAAATATGGATCTCT+AGG | + | chr7_4:48727947-48727966 | None:intergenic | 40.0% | |
| TCCATATTTGTGGGAGACAT+TGG | - | chr7_4:48727952-48727971 | Msa1159130:CDS | 40.0% | |
| AAGCTTGATGCAATGTTAGG+TGG | - | chr7_4:48728031-48728050 | Msa1159130:CDS | 40.0% | |
| CTTAGGCTTACTCAAACACT+TGG | - | chr7_4:48728088-48728107 | Msa1159130:CDS | 40.0% | |
| ! | AACAACCCTTGTGTCACTCA+AGG | - | chr7_4:48726600-48726619 | Msa1159130:CDS | 45.0% |
| ! | CATAGCCTTGAGTGACACAA+GGG | + | chr7_4:48726608-48726627 | None:intergenic | 45.0% |
| ! | ACATAGCCTTGAGTGACACA+AGG | + | chr7_4:48726609-48726628 | None:intergenic | 45.0% |
| AGGCTTTCACCAACTATTGC+TGG | - | chr7_4:48726783-48726802 | Msa1159130:CDS | 45.0% | |
| !! | GGTGTTACTCTTCTCTCTCT+TGG | - | chr7_4:48726804-48726823 | Msa1159130:CDS | 45.0% |
| GGATTCAACACTGTTCTTGG+TGG | - | chr7_4:48726891-48726910 | Msa1159130:CDS | 45.0% | |
| GGTTTGTGATGAGTGTGACA+TGG | - | chr7_4:48727645-48727664 | Msa1159130:CDS | 45.0% | |
| CTTGCTTGGGGGAATTCAAT+TGG | - | chr7_4:48727758-48727777 | Msa1159130:CDS | 45.0% | |
| GGGGCTCAAATAGCAATTTC+AGG | - | chr7_4:48727827-48727846 | Msa1159130:CDS | 45.0% | |
| GCCAATGTCTCCCACAAATA+TGG | + | chr7_4:48727956-48727975 | None:intergenic | 45.0% | |
| ! | GTGGGAGACATTGGCATTTT+TGG | - | chr7_4:48727961-48727980 | Msa1159130:CDS | 45.0% |
| CTTGATGCAATGTTAGGTGG+AGG | - | chr7_4:48728034-48728053 | Msa1159130:CDS | 45.0% | |
| ! | AACAACCCTTGTGTCACTCA+AGG | - | chr7_4:48726600-48726619 | Msa1159130:CDS | 45.0% |
| ! | CATAGCCTTGAGTGACACAA+GGG | + | chr7_4:48726608-48726627 | None:intergenic | 45.0% |
| ! | ACATAGCCTTGAGTGACACA+AGG | + | chr7_4:48726609-48726628 | None:intergenic | 45.0% |
| AGGCTTTCACCAACTATTGC+TGG | - | chr7_4:48726783-48726802 | Msa1159130:CDS | 45.0% | |
| !! | GGTGTTACTCTTCTCTCTCT+TGG | - | chr7_4:48726804-48726823 | Msa1159130:CDS | 45.0% |
| GGATTCAACACTGTTCTTGG+TGG | - | chr7_4:48726891-48726910 | Msa1159130:CDS | 45.0% | |
| GGTTTGTGATGAGTGTGACA+TGG | - | chr7_4:48727645-48727664 | Msa1159130:CDS | 45.0% | |
| CTTGCTTGGGGGAATTCAAT+TGG | - | chr7_4:48727758-48727777 | Msa1159130:CDS | 45.0% | |
| GGGGCTCAAATAGCAATTTC+AGG | - | chr7_4:48727827-48727846 | Msa1159130:CDS | 45.0% | |
| GCCAATGTCTCCCACAAATA+TGG | + | chr7_4:48727956-48727975 | None:intergenic | 45.0% | |
| ! | GTGGGAGACATTGGCATTTT+TGG | - | chr7_4:48727961-48727980 | Msa1159130:CDS | 45.0% |
| CTTGATGCAATGTTAGGTGG+AGG | - | chr7_4:48728034-48728053 | Msa1159130:CDS | 45.0% | |
| !! | CTCTGGTGTCACTGATGATG+AGG | - | chr7_4:48726518-48726537 | Msa1159130:CDS | 50.0% |
| !! | GGTAATGGGACACAAGGCAT+TGG | - | chr7_4:48726870-48726889 | Msa1159130:CDS | 50.0% |
| ! | TTGTTACCATGGCTAGCTGC+AGG | - | chr7_4:48727623-48727642 | Msa1159130:intron | 50.0% |
| ! | TGTTACCATGGCTAGCTGCA+GGG | - | chr7_4:48727624-48727643 | Msa1159130:intron | 50.0% |
| !! | GCTTTAAATGGTGGGCCAGA+GGG | - | chr7_4:48727806-48727825 | Msa1159130:CDS | 50.0% |
| !! | CTTTAAATGGTGGGCCAGAG+GGG | - | chr7_4:48727807-48727826 | Msa1159130:CDS | 50.0% |
| !! | TTTAAATGGTGGGCCAGAGG+GGG | - | chr7_4:48727808-48727827 | Msa1159130:CDS | 50.0% |
| !! | ATTGCTATTTGAGCCCCCTC+TGG | + | chr7_4:48727824-48727843 | None:intergenic | 50.0% |
| !! | CTCTGGTGTCACTGATGATG+AGG | - | chr7_4:48726518-48726537 | Msa1159130:CDS | 50.0% |
| !! | GGTAATGGGACACAAGGCAT+TGG | - | chr7_4:48726870-48726889 | Msa1159130:CDS | 50.0% |
| ! | TTGTTACCATGGCTAGCTGC+AGG | - | chr7_4:48727623-48727642 | Msa1159130:intron | 50.0% |
| ! | TGTTACCATGGCTAGCTGCA+GGG | - | chr7_4:48727624-48727643 | Msa1159130:intron | 50.0% |
| !! | GCTTTAAATGGTGGGCCAGA+GGG | - | chr7_4:48727806-48727825 | Msa1159130:CDS | 50.0% |
| !! | CTTTAAATGGTGGGCCAGAG+GGG | - | chr7_4:48727807-48727826 | Msa1159130:CDS | 50.0% |
| !! | TTTAAATGGTGGGCCAGAGG+GGG | - | chr7_4:48727808-48727827 | Msa1159130:CDS | 50.0% |
| !! | ATTGCTATTTGAGCCCCCTC+TGG | + | chr7_4:48727824-48727843 | None:intergenic | 50.0% |
| ACAAACCCTGCAGCTAGCCA+TGG | + | chr7_4:48727632-48727651 | None:intergenic | 55.0% | |
| !! | GGCTTTAAATGGTGGGCCAG+AGG | - | chr7_4:48727805-48727824 | Msa1159130:CDS | 55.0% |
| ACAAACCCTGCAGCTAGCCA+TGG | + | chr7_4:48727632-48727651 | None:intergenic | 55.0% | |
| !! | GGCTTTAAATGGTGGGCCAG+AGG | - | chr7_4:48727805-48727824 | Msa1159130:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 48726357 | 48728141 | 48726357 | ID=Msa1159130;Name=Msa1159130 |
| chr7_4 | mRNA | 48726357 | 48728141 | 48726357 | ID=Msa1159130-mRNA-1;Parent=Msa1159130;Name=Msa1159130-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0|0|1|0|0|3|0|504 |
| chr7_4 | exon | 48727934 | 48728141 | 48727934 | ID=Msa1159130-mRNA-1:exon:13288;Parent=Msa1159130-mRNA-1 |
| chr7_4 | exon | 48727628 | 48727876 | 48727628 | ID=Msa1159130-mRNA-1:exon:13287;Parent=Msa1159130-mRNA-1 |
| chr7_4 | exon | 48726357 | 48727414 | 48726357 | ID=Msa1159130-mRNA-1:exon:13286;Parent=Msa1159130-mRNA-1 |
| chr7_4 | CDS | 48727934 | 48728141 | 48727934 | ID=Msa1159130-mRNA-1:cds;Parent=Msa1159130-mRNA-1 |
| chr7_4 | CDS | 48727628 | 48727876 | 48727628 | ID=Msa1159130-mRNA-1:cds;Parent=Msa1159130-mRNA-1 |
| chr7_4 | CDS | 48726357 | 48727414 | 48726357 | ID=Msa1159130-mRNA-1:cds;Parent=Msa1159130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
