AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1384460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1384460 MtrunA17_Chr3g0142131 98.223 394 6 1 1 393 1 394 0.0 772
Msa1384460 MtrunA17_Chr1g0155761 81.592 402 63 5 1 393 1 400 0.0 643
Msa1384460 MtrunA17_Chr6g0483401 59.659 352 128 5 29 376 19 360 3.63e-143 411
Msa1384460 MtrunA17_Chr5g0408001 40.761 368 205 5 17 376 7 369 1.36e-87 270
Msa1384460 MtrunA17_Chr5g0407991 39.452 365 213 4 17 376 6 367 8.65e-87 268
Msa1384460 MtrunA17_Chr5g0408031 39.247 372 207 5 17 376 7 371 2.70e-83 259
Msa1384460 MtrunA17_Chr7g0255561 39.306 346 200 2 8 352 2 338 2.79e-83 259
Msa1384460 MtrunA17_Chr7g0255581 39.306 346 200 2 8 352 2 338 2.79e-83 259
Msa1384460 MtrunA17_Chr5g0407971 40.762 341 194 4 17 352 8 345 3.74e-83 259
Msa1384460 MtrunA17_Chr8g0354121 40.774 336 190 3 17 351 10 337 1.77e-82 257
Msa1384460 MtrunA17_Chr5g0408041 39.722 360 211 3 22 376 13 371 6.33e-82 256
Msa1384460 MtrunA17_Chr1g0186601 40.356 337 186 4 17 352 13 335 8.04e-82 254
Msa1384460 MtrunA17_Chr1g0171301 38.304 342 198 3 12 352 8 337 1.01e-81 254
Msa1384460 MtrunA17_Chr1g0186611 39.169 337 190 3 17 352 13 335 1.79e-81 253
Msa1384460 MtrunA17_Chr5g0404811 50.566 265 112 4 128 390 1 248 3.54e-81 249
Msa1384460 MtrunA17_Chr1g0186641 40.179 336 186 3 17 351 10 331 4.05e-81 252
Msa1384460 MtrunA17_Chr3g0114691 36.364 352 214 3 1 352 1 342 1.06e-79 250
Msa1384460 MtrunA17_Chr3g0081511 38.920 352 195 3 5 351 2 338 5.50e-79 248
Msa1384460 MtrunA17_Chr8g0369841 37.097 372 220 6 17 383 6 368 1.10e-78 247
Msa1384460 MtrunA17_Chr1g0160171 37.637 364 207 3 17 372 13 364 1.19e-78 247
Msa1384460 MtrunA17_Chr1g0186561 40.950 337 185 4 17 352 13 336 1.79e-78 246
Msa1384460 MtrunA17_Chr3g0081421 40.351 342 195 3 10 350 7 340 1.83e-78 247
Msa1384460 MtrunA17_Chr1g0160181 40.122 329 186 3 25 352 23 341 6.49e-78 245
Msa1384460 MtrunA17_Chr1g0186571 38.253 332 190 4 22 352 15 332 1.57e-75 238
Msa1384460 MtrunA17_Chr8g0334761 38.017 363 202 4 11 365 1 348 2.60e-75 238
Msa1384460 MtrunA17_Chr3g0114731 38.650 326 186 2 25 350 23 334 4.00e-73 233
Msa1384460 MtrunA17_Chr2g0310441 37.127 369 213 4 25 387 15 370 1.02e-72 231
Msa1384460 MtrunA17_Chr7g0263101 36.915 363 211 4 24 380 17 367 3.53e-72 230
Msa1384460 MtrunA17_Chr1g0182291 35.422 367 217 4 17 379 12 362 6.05e-72 229
Msa1384460 MtrunA17_Chr2g0284261 35.905 337 200 2 17 352 5 326 2.37e-71 228
Msa1384460 MtrunA17_Chr6g0463971 36.443 343 208 3 14 356 10 342 3.58e-71 227
Msa1384460 MtrunA17_Chr3g0114711 36.538 364 177 5 26 350 20 368 6.62e-71 228
Msa1384460 MtrunA17_Chr1g0164831 36.047 344 203 4 25 368 8 334 1.49e-69 222
Msa1384460 MtrunA17_Chr1g0184221 32.418 364 212 5 17 366 13 356 6.74e-69 221
Msa1384460 MtrunA17_Chr8g0334771 37.789 389 216 6 11 388 1 374 1.80e-68 221
Msa1384460 MtrunA17_Chr7g0271561 35.455 330 200 3 25 350 12 332 7.70e-68 219
Msa1384460 MtrunA17_Chr4g0059311 34.441 331 204 3 23 352 14 332 7.92e-68 218
Msa1384460 MtrunA17_Chr3g0126101 36.223 323 190 3 37 359 23 329 8.26e-65 210
Msa1384460 MtrunA17_Chr2g0278561 36.232 345 211 2 13 357 8 343 1.25e-64 211
Msa1384460 MtrunA17_Chr2g0290611 36.111 360 211 4 25 376 17 365 5.10e-64 209
Msa1384460 MtrunA17_Chr3g0114701 35.652 345 210 4 25 368 14 347 6.30e-64 209
Msa1384460 MtrunA17_Chr3g0129591 33.898 354 224 2 22 373 7 352 1.01e-63 207
Msa1384460 MtrunA17_Chr3g0129601 35.650 331 202 4 22 351 31 351 2.09e-63 207
Msa1384460 MtrunA17_Chr5g0413961 36.686 338 195 4 33 370 27 345 2.57e-62 204
Msa1384460 MtrunA17_Chr8g0334751 37.297 370 201 6 25 390 16 358 1.23e-61 202
Msa1384460 MtrunA17_Chr3g0129571 33.535 331 210 2 22 350 9 331 2.60e-61 201
Msa1384460 MtrunA17_Chr1g0160111 32.153 339 221 2 29 364 16 348 9.14e-61 201
Msa1384460 MtrunA17_Chr8g0383731 33.531 337 214 2 17 351 2 330 2.28e-60 199
Msa1384460 MtrunA17_Chr2g0278541 35.897 351 209 3 25 369 17 357 4.51e-60 199
Msa1384460 MtrunA17_Chr2g0278551 35.043 351 215 5 25 374 17 355 6.10e-59 196
Msa1384460 MtrunA17_Chr4g0073241 33.867 375 217 7 25 393 13 362 6.81e-59 196
Msa1384460 MtrunA17_Chr5g0413941 32.081 346 215 4 15 356 2 331 4.33e-55 185
Msa1384460 MtrunA17_Chr2g0332001 33.435 329 205 2 25 352 43 358 4.39e-55 186
Msa1384460 MtrunA17_Chr3g0129581 33.051 354 227 3 22 373 7 352 1.25e-54 184
Msa1384460 MtrunA17_Chr4g0050891 32.258 341 214 2 10 345 3 331 3.66e-54 183
Msa1384460 MtrunA17_Chr4g0050941 33.512 373 236 4 25 393 17 381 2.41e-53 181
Msa1384460 MtrunA17_Chr5g0413921 31.085 341 221 4 17 356 4 331 2.31e-52 177
Msa1384460 MtrunA17_Chr1g0177221 36.194 268 154 3 12 278 13 264 4.12e-52 175
Msa1384460 MtrunA17_Chr4g0051021 30.707 368 244 4 25 392 19 375 2.06e-51 176
Msa1384460 MtrunA17_Chr5g0404801 70.588 119 35 0 15 133 2 120 4.37e-51 167
Msa1384460 MtrunA17_Chr5g0428881 29.380 371 241 4 14 374 9 368 1.78e-49 171
Msa1384460 MtrunA17_Chr5g0413951 30.211 331 211 4 25 351 12 326 2.65e-49 170
Msa1384460 MtrunA17_Chr5g0413931 31.858 339 209 6 23 356 9 330 7.93e-47 163
Msa1384460 MtrunA17_Chr4g0050881 32.011 353 214 7 25 368 14 349 8.38e-47 163
Msa1384460 MtrunA17_Chr4g0050931 31.832 333 173 3 25 352 17 300 8.83e-46 159
Msa1384460 MtrunA17_Chr1g0150151 31.792 346 220 6 8 351 2 333 3.67e-45 159
Msa1384460 MtrunA17_Chr4g0056081 30.704 355 215 7 9 351 3 338 6.94e-43 153
Msa1384460 MtrunA17_Chr5g0441761 28.529 340 223 2 14 350 5 327 1.86e-42 152
Msa1384460 MtrunA17_Chr1g0211801 32.677 254 158 3 25 278 16 256 2.23e-40 144
Msa1384460 MtrunA17_Chr5g0399281 32.551 341 206 9 17 350 5 328 2.44e-40 146
Msa1384460 MtrunA17_Chr7g0227921 30.245 367 223 7 24 388 15 350 2.79e-40 146
Msa1384460 MtrunA17_Chr5g0429001 31.410 312 202 4 78 384 7 311 1.14e-39 144
Msa1384460 MtrunA17_Chr4g0051001 30.921 304 201 3 25 328 36 330 9.70e-39 141
Msa1384460 MtrunA17_Chr6g0451211 28.779 344 219 9 40 376 32 356 2.06e-38 141
Msa1384460 MtrunA17_Chr3g0084091 33.203 256 160 2 95 350 5 249 4.37e-38 139
Msa1384460 MtrunA17_Chr3g0126091 27.190 331 219 7 34 356 25 341 4.68e-34 129
Msa1384460 MtrunA17_Chr6g0451201 30.449 312 200 4 40 351 32 326 6.99e-33 126
Msa1384460 MtrunA17_Chr2g0278021 34.043 235 144 2 134 365 1 227 1.09e-32 124
Msa1384460 MtrunA17_Chr6g0451251 30.117 342 220 6 40 379 32 356 4.90e-32 124
Msa1384460 MtrunA17_Chr6g0451261 27.667 300 201 5 34 331 25 310 6.50e-32 127
Msa1384460 MtrunA17_Chr6g0451171 26.901 342 229 6 29 368 21 343 6.45e-30 118
Msa1384460 MtrunA17_Chr8g0334721 37.671 146 84 1 243 388 2 140 3.36e-28 108
Msa1384460 MtrunA17_Chr8g0334711 36.139 202 115 5 25 225 15 203 6.32e-27 106
Msa1384460 MtrunA17_Chr6g0451191 25.957 235 157 3 134 368 1 218 1.05e-21 93.2
Msa1384460 MtrunA17_Chr8g0334731 30.392 204 109 6 24 225 15 187 1.32e-17 80.5
Msa1384460 MtrunA17_Chr1g0182261 34.815 135 84 4 221 352 79 212 8.91e-17 79.0
Msa1384460 MtrunA17_Chr4g0050921 37.255 102 64 0 230 331 3 104 2.13e-16 75.5
Msa1384460 MtrunA17_Chr2g0278031 40.566 106 63 0 25 130 19 124 7.67e-16 73.6
Msa1384460 MtrunA17_Chr1g0211811 43.662 71 40 0 280 350 1 71 1.09e-15 72.0
Msa1384460 MtrunA17_Chr1g0172881 29.487 156 89 3 124 278 14 149 2.39e-15 73.2
Msa1384460 MtrunA17_Chr1g0177231 38.202 89 54 1 264 352 15 102 2.60e-15 72.0
Msa1384460 MtrunA17_Chr4g0050911 35.200 125 78 1 105 229 16 137 4.48e-14 69.7
Msa1384460 MtrunA17_Chr1g0172891 41.176 68 40 0 285 352 13 80 6.88e-14 67.8
Msa1384460 MtrunA17_Chr8g0334741 28.387 155 78 5 243 390 2 130 5.08e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1384460 AT1G75500.1 75.000 396 89 5 1 393 1 389 0.0 586
Msa1384460 AT1G75500.2 75.000 396 89 5 1 393 1 389 0.0 586
Msa1384460 AT3G53210.1 55.968 377 152 3 15 388 4 369 1.23e-146 421
Msa1384460 AT3G18200.2 57.104 366 141 3 15 380 29 378 1.23e-145 418
Msa1384460 AT3G53210.3 60.985 264 92 2 15 278 4 256 1.59e-110 325
Msa1384460 AT3G53210.2 52.862 297 126 3 95 388 27 312 8.26e-105 312
Msa1384460 AT3G18200.1 53.788 264 106 3 117 380 1 248 2.03e-93 281
Msa1384460 AT4G30420.2 39.740 385 211 6 17 393 5 376 6.32e-82 256
Msa1384460 AT4G30420.1 40.212 378 205 6 24 393 2 366 1.28e-81 254
Msa1384460 AT5G07050.1 37.736 371 224 3 12 380 9 374 4.55e-80 252
Msa1384460 AT4G08300.1 37.538 333 199 2 24 356 14 337 4.22e-77 243
Msa1384460 AT4G08290.1 35.733 375 221 3 17 381 9 373 5.60e-76 241
Msa1384460 AT1G44800.1 34.254 362 224 3 17 376 7 356 5.82e-76 240
Msa1384460 AT5G45370.2 37.500 376 212 6 17 386 16 374 8.07e-76 240
Msa1384460 AT5G45370.4 37.500 376 212 6 17 386 16 374 8.07e-76 240
Msa1384460 AT5G45370.1 37.736 371 194 6 17 386 16 350 1.01e-75 239
Msa1384460 AT1G21890.1 37.015 335 208 1 22 356 12 343 3.18e-74 236
Msa1384460 AT2G39510.1 36.316 380 214 8 25 393 12 374 1.20e-73 234
Msa1384460 AT3G45870.1 40.606 330 192 4 17 345 8 334 4.13e-72 231
Msa1384460 AT2G40900.1 36.901 355 202 3 11 360 1 338 1.39e-71 229
Msa1384460 AT4G19185.1 37.433 374 216 5 22 392 22 380 1.41e-70 227
Msa1384460 AT1G09380.1 38.462 325 192 2 24 348 11 327 6.89e-70 224
Msa1384460 AT5G13670.1 35.417 336 206 3 17 351 4 329 1.88e-67 218
Msa1384460 AT2G37460.1 37.101 345 196 6 17 357 11 338 1.01e-66 216
Msa1384460 AT3G45870.8 39.936 313 184 4 17 328 8 317 1.45e-66 214
Msa1384460 AT4G01440.1 37.898 314 181 2 40 352 29 329 1.12e-65 213
Msa1384460 AT3G30340.1 33.636 330 202 2 25 351 15 330 3.17e-65 212
Msa1384460 AT1G11450.3 36.232 345 201 3 25 368 20 346 8.57e-65 211
Msa1384460 AT1G01070.1 34.521 365 221 4 15 372 10 363 3.49e-64 209
Msa1384460 AT4G01430.1 35.260 346 210 5 40 381 28 363 3.33e-63 207
Msa1384460 AT1G43650.1 34.821 336 200 3 22 355 8 326 1.75e-62 204
Msa1384460 AT1G21890.2 36.156 307 193 1 22 328 12 315 2.92e-62 204
Msa1384460 AT3G56620.1 34.615 338 205 2 11 348 1 322 5.44e-62 204
Msa1384460 AT1G11450.5 37.188 320 182 3 50 368 1 302 2.79e-61 200
Msa1384460 AT4G01440.3 37.931 290 166 2 40 328 29 305 3.79e-60 197
Msa1384460 AT1G11450.2 37.621 311 175 3 59 368 3 295 8.94e-60 196
Msa1384460 AT1G11460.1 34.650 329 202 3 25 352 20 336 7.66e-58 192
Msa1384460 AT5G64700.1 34.462 325 208 2 28 352 15 334 4.52e-57 191
Msa1384460 AT4G28040.1 30.556 360 221 6 17 373 4 337 6.29e-55 185
Msa1384460 AT4G28040.5 30.556 360 221 6 17 373 4 337 6.29e-55 185
Msa1384460 AT4G28040.3 30.556 360 221 6 17 373 4 337 6.29e-55 185
Msa1384460 AT4G28040.4 30.556 360 221 6 17 373 4 337 6.29e-55 185
Msa1384460 AT4G28040.2 30.556 360 221 6 17 373 4 337 6.29e-55 185
Msa1384460 AT3G45870.9 40.684 263 152 4 17 278 8 267 9.65e-55 182
Msa1384460 AT1G11450.4 35.410 305 183 2 25 328 20 311 3.78e-54 182
Msa1384460 AT1G01070.2 35.144 313 185 4 67 372 15 316 1.42e-53 181
Msa1384460 AT4G19185.2 35.762 302 176 5 94 392 16 302 1.91e-53 180
Msa1384460 AT4G01430.2 35.739 291 175 3 40 328 28 308 1.13e-52 178
Msa1384460 AT1G68170.2 31.701 388 231 5 13 393 5 365 1.90e-52 179
Msa1384460 AT1G68170.1 32.275 378 222 5 23 393 5 355 6.94e-52 177
Msa1384460 AT1G25270.1 33.718 347 206 4 24 366 6 332 1.64e-51 176
Msa1384460 AT4G08290.2 37.165 261 154 2 17 277 9 259 1.76e-51 174
Msa1384460 AT5G45370.6 36.735 294 153 6 104 386 1 272 4.21e-51 173
Msa1384460 AT5G45370.5 36.735 294 153 6 104 386 1 272 4.21e-51 173
Msa1384460 AT2G37450.2 30.978 368 205 8 25 388 13 335 2.64e-50 172
Msa1384460 AT1G11450.1 37.269 271 151 3 99 368 2 254 4.75e-49 167
Msa1384460 AT4G01440.4 38.750 240 133 2 40 278 29 255 4.21e-48 165
Msa1384460 AT4G01450.2 35.897 312 182 2 40 350 29 323 2.49e-47 165
Msa1384460 AT5G40210.1 30.220 364 212 11 9 367 4 330 4.62e-47 164
Msa1384460 AT4G01450.1 35.862 290 168 2 40 328 29 301 8.07e-46 161
Msa1384460 AT5G40240.1 30.030 333 216 4 23 351 22 341 1.46e-44 158
Msa1384460 AT5G40240.3 30.030 333 216 4 23 351 22 341 1.46e-44 158
Msa1384460 AT5G40230.1 29.973 367 227 9 24 382 24 368 2.34e-44 157
Msa1384460 AT5G40240.2 30.030 333 216 4 23 351 36 355 2.83e-44 158
Msa1384460 AT1G70260.1 29.282 362 234 5 37 392 28 373 7.96e-44 156
Msa1384460 AT3G28050.1 29.600 375 233 10 24 392 15 364 2.49e-43 155
Msa1384460 AT4G01440.5 36.123 227 131 2 122 347 3 216 4.01e-43 151
Msa1384460 AT4G01440.2 36.123 227 131 2 122 347 3 216 4.01e-43 151
Msa1384460 AT3G28130.2 31.454 337 211 8 21 352 13 334 1.41e-42 152
Msa1384460 AT3G30340.2 31.907 257 158 2 25 278 15 257 2.52e-42 150
Msa1384460 AT3G28130.5 32.669 251 157 4 103 352 9 248 8.45e-40 143
Msa1384460 AT3G28130.1 32.669 251 157 4 103 352 9 248 8.45e-40 143
Msa1384460 AT4G01450.4 35.417 240 137 2 40 278 29 251 1.65e-38 139
Msa1384460 AT5G45370.3 34.496 258 146 6 135 386 74 314 4.48e-38 140
Msa1384460 AT3G45870.5 38.318 214 128 4 133 345 49 259 4.72e-38 139
Msa1384460 AT5G47470.1 28.696 345 223 6 10 350 19 344 5.11e-38 140
Msa1384460 AT3G28100.1 30.149 335 215 9 23 352 16 336 6.10e-38 140
Msa1384460 AT5G47470.2 28.653 349 218 5 10 350 47 372 6.41e-38 141
Msa1384460 AT5G47470.3 28.653 349 218 5 10 350 47 372 7.21e-38 140
Msa1384460 AT2G37450.3 31.359 287 169 6 106 388 1 263 1.00e-37 137
Msa1384460 AT3G28070.2 28.626 262 175 3 104 364 8 258 3.76e-37 136
Msa1384460 AT3G28080.5 30.189 265 168 5 104 364 8 259 8.60e-37 135
Msa1384460 AT3G28080.7 30.189 265 168 5 104 364 8 259 8.60e-37 135
Msa1384460 AT3G28080.8 30.189 265 168 5 104 364 8 259 8.60e-37 135
Msa1384460 AT3G28080.6 30.189 265 168 5 104 364 8 259 8.60e-37 135
Msa1384460 AT3G28070.1 28.626 262 175 3 104 364 100 350 3.70e-36 135
Msa1384460 AT3G28080.1 30.189 265 168 5 104 364 97 348 6.60e-36 135
Msa1384460 AT3G28080.2 30.189 265 168 5 104 364 89 340 6.91e-36 134
Msa1384460 AT1G43650.2 32.558 258 155 3 22 277 8 248 9.67e-35 129
Msa1384460 AT4G15540.1 29.429 333 205 7 23 351 19 325 1.14e-34 131
Msa1384460 AT4G15540.2 29.429 333 205 7 23 351 19 325 1.14e-34 131
Msa1384460 AT5G64700.2 34.177 237 151 2 28 264 15 246 1.63e-34 129
Msa1384460 AT1G60050.1 29.063 320 217 3 37 352 29 342 6.32e-34 130
Msa1384460 AT4G16620.1 30.303 363 224 10 29 386 20 358 1.35e-33 129
Msa1384460 AT4G01450.3 37.019 208 113 2 40 246 29 219 3.61e-33 124
Msa1384460 AT3G45870.6 37.056 197 120 4 133 328 49 242 8.89e-33 124
Msa1384460 AT3G45870.7 37.056 197 120 4 133 328 49 242 8.89e-33 124
Msa1384460 AT4G01430.3 31.915 235 147 4 150 381 2 226 1.37e-32 122
Msa1384460 AT3G45870.2 42.254 142 81 1 204 345 43 183 1.92e-30 117
Msa1384460 AT4G24980.1 29.524 315 144 9 37 351 3 239 1.43e-28 113
Msa1384460 AT2G37450.1 32.571 175 110 2 215 388 129 296 3.69e-28 112
Msa1384460 AT3G28130.3 30.455 220 141 4 134 352 1 209 8.82e-28 109
Msa1384460 AT3G28070.3 26.991 226 153 3 104 328 100 314 1.61e-26 108
Msa1384460 AT3G28070.5 25.862 232 160 3 134 364 1 221 5.34e-25 102
Msa1384460 AT3G28080.9 27.234 235 154 5 134 364 1 222 1.68e-24 100
Msa1384460 AT4G16620.4 30.175 285 171 9 106 386 1 261 2.82e-22 95.5
Msa1384460 AT4G16620.2 30.175 285 171 9 106 386 1 261 2.82e-22 95.5
Msa1384460 AT3G45870.4 37.241 145 87 4 135 278 4 145 2.26e-21 90.5
Msa1384460 AT3G45870.3 37.415 147 88 4 133 278 49 192 2.49e-21 91.7
Msa1384460 AT4G16620.3 31.050 219 136 4 29 246 20 224 2.17e-20 90.5
Msa1384460 AT3G28130.4 29.249 253 158 8 21 267 13 250 6.20e-20 89.0
Msa1384460 AT3G28100.3 29.070 258 166 7 23 276 16 260 5.20e-18 83.6
Msa1384460 AT3G28130.6 33.962 159 97 4 21 175 13 167 1.14e-17 81.6
Msa1384460 AT3G28100.2 34.194 155 98 3 23 175 16 168 4.18e-16 77.8
Msa1384460 AT3G28080.4 43.421 76 41 1 104 177 8 83 2.40e-13 69.3
Msa1384460 AT3G28080.4 31.132 106 62 3 269 364 101 205 6.56e-12 65.1
Msa1384460 AT3G28080.3 43.421 76 41 1 104 177 97 172 8.55e-13 68.9
Msa1384460 AT3G28080.3 31.132 106 62 3 269 364 190 294 1.46e-11 65.5

Find 157 sgRNAs with CRISPR-Local

Find 303 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATAGATGTCAATTAAATT+TGG 0.111724 tig0020661:-75466 Msa1384460:three_prime_UTR
TTTGGTAAACAAAATTTATT+AGG 0.156606 tig0020661:-75369 Msa1384460:three_prime_UTR
TGCCTATATATGTTAATTAA+TGG 0.166730 tig0020661:-75420 Msa1384460:three_prime_UTR
AACTCTTGTTGTGGCTATTA+TGG 0.204204 tig0020661:-76635 Msa1384460:CDS
CCTCTAAACAGCAGCATTAA+TGG 0.217047 tig0020661:-78350 Msa1384460:CDS
CTTGGATGTTTGTACCTTAT+AGG 0.224383 tig0020661:-78257 Msa1384460:CDS
TGTTCTAATATCATCATTAA+TGG 0.235933 tig0020661:-79830 Msa1384460:five_prime_UTR
GCAATAATATTGCGGTAAAC+TGG 0.242432 tig0020661:+79288 None:intergenic
AATTCAAAGTGCTTTCTTAC+TGG 0.252575 tig0020661:-75530 Msa1384460:three_prime_UTR
ACTTCCTATACATGTTTCTT+TGG 0.256420 tig0020661:-78158 Msa1384460:CDS
TATAGGCATAATGGGATTTC+AGG 0.258266 tig0020661:+75435 None:intergenic
TTTAGGAGAAGAGTTCTATT+TGG 0.258282 tig0020661:-76602 Msa1384460:CDS
TCAAAGCAATAATGAGAAAT+TGG 0.266484 tig0020661:+78129 None:intergenic
CCAAATTTAATTGACATCTA+TGG 0.268831 tig0020661:+75466 None:intergenic
TGATACACCGCAACGAAAAC+TGG 0.280768 tig0020661:+76667 None:intergenic
ATTATGGCTTCCCTTGCTTT+AGG 0.284109 tig0020661:-76619 Msa1384460:CDS
CATAGATGTCAATTAAATTT+GGG 0.311237 tig0020661:-75465 Msa1384460:three_prime_UTR
CCATTAATGCTGCTGTTTAG+AGG 0.328701 tig0020661:+78350 None:intergenic
GCTGATTCAGGTGGATCTTC+GGG 0.328958 tig0020661:-79441 Msa1384460:CDS
TTTATGAATGGGTTTGCTTT+TGG 0.335652 tig0020661:-75555 Msa1384460:three_prime_UTR
TTAACATATATAGGCATAAT+GGG 0.337448 tig0020661:+75427 None:intergenic
TTAGGAGAAGAGTTCTATTT+GGG 0.354674 tig0020661:-76601 Msa1384460:CDS
GGCTGATTCAGGTGGATCTT+CGG 0.355763 tig0020661:-79442 Msa1384460:CDS
ATTAACATATATAGGCATAA+TGG 0.357185 tig0020661:+75426 None:intergenic
AGGTTGAGAAAGTGATGTTT+TGG 0.357252 tig0020661:+75746 None:intergenic
CTCAATCTCATCACTGGGAT+TGG 0.359629 tig0020661:-78306 Msa1384460:CDS
GCCATGTTGGCCCTGCAGTT+TGG 0.363749 tig0020661:-79375 Msa1384460:CDS
ATGACAAACAATGTCCTATA+AGG 0.364535 tig0020661:+78243 None:intergenic
AAATTCAAAGAGATCATAAC+AGG 0.364850 tig0020661:+79797 None:intergenic
AAGTAGTAGTAATGTATATC+TGG 0.370668 tig0020661:+75598 None:intergenic
GCCCTGCAGTTTGGATATGC+AGG 0.381834 tig0020661:-79366 Msa1384460:CDS
TTTGTCATGGTCTGGTTGGC+TGG 0.389764 tig0020661:-78228 Msa1384460:CDS
AATACAGTAATGGCTGATTC+AGG 0.391933 tig0020661:-79453 Msa1384460:exon
TTGGTAAACAAAATTTATTA+GGG 0.392131 tig0020661:-75368 Msa1384460:three_prime_UTR
GAAGAGGTGGTGGAAGAGTA+AGG 0.392825 tig0020661:+79557 None:intergenic
AATTTATTAGGGAGAGCATA+AGG 0.394245 tig0020661:-75357 Msa1384460:three_prime_UTR
AACCAGGGTTTCTACTTGCT+TGG 0.399423 tig0020661:-78668 Msa1384460:CDS
AAGCCTGAGCATCTCTTTCA+AGG 0.401704 tig0020661:+78105 None:intergenic
TTGTGATGTTACAGGATCAT+TGG 0.404975 tig0020661:-75903 Msa1384460:intron
CTCAATCTCAATCTCATCAC+TGG 0.407185 tig0020661:-78312 Msa1384460:CDS
GAAAACTCTAAACTTGAAAC+TGG 0.413543 tig0020661:-75689 Msa1384460:three_prime_UTR
AACCATTAATTAACATATAT+AGG 0.420354 tig0020661:+75418 None:intergenic
GGACATTGTTTGTCATGGTC+TGG 0.421517 tig0020661:-78236 Msa1384460:CDS
GGGGTTATACCTAGTGTTGT+GGG 0.425622 tig0020661:-75862 Msa1384460:CDS
CTGCTGTTTAGAGGTGGAAC+TGG 0.427694 tig0020661:+78359 None:intergenic
CGGAGCATAGTAACATAATC+AGG 0.429439 tig0020661:-75785 Msa1384460:CDS
ATTCAAAGTGCTTTCTTACT+GGG 0.430014 tig0020661:-75529 Msa1384460:three_prime_UTR
TTGCATTCGCTGTACAGATA+TGG 0.431672 tig0020661:-76708 Msa1384460:CDS
TCAGCTGCATGCGGCCATGT+TGG 0.431764 tig0020661:-79388 Msa1384460:CDS
TATTATAAGATTATTAAGAA+TGG 0.433275 tig0020661:+79520 None:intergenic
CTCAAGAGCTGCACTTAACA+TGG 0.436174 tig0020661:-79331 Msa1384460:CDS
GATCCTTGAAAGAGATGCTC+AGG 0.436181 tig0020661:-78108 Msa1384460:CDS
GCATGCAGCTGAAACCGTTC+TGG 0.437452 tig0020661:+79399 None:intergenic
GAAGCTTGTGTGTTTATGAA+TGG 0.439160 tig0020661:-75567 Msa1384460:three_prime_UTR
TCAATCTCATCACTGGGATT+GGG 0.458072 tig0020661:-78305 Msa1384460:CDS
GGAGCAGTGTTGATCATTGT+GGG 0.460894 tig0020661:-75882 Msa1384460:CDS
GGGTTTCTACTTGCTTGGCT+TGG 0.462522 tig0020661:-78663 Msa1384460:CDS
GGCGAGCCGGATACTTCTTA+AGG 0.463392 tig0020661:+78189 None:intergenic
GCCACAACAAGAGTTTGAAC+AGG 0.464692 tig0020661:+76643 None:intergenic
TTGAAAGAGATGCTCAGGCT+TGG 0.468366 tig0020661:-78103 Msa1384460:CDS
GGTATAAATATAGTGAAAGA+GGG 0.470755 tig0020661:+79579 None:intergenic
TGGGGTTATACCTAGTGTTG+TGG 0.473197 tig0020661:-75863 Msa1384460:CDS
ATTGTTTGTCATGGTCTGGT+TGG 0.476353 tig0020661:-78232 Msa1384460:CDS
CAGCTGAAACCGTTCTGGTA+TGG 0.479979 tig0020661:+79404 None:intergenic
TATTAAGAATGGAGAGGAAG+TGG 0.483763 tig0020661:+79531 None:intergenic
GAAGTGGTGTGAAGAGGTGG+TGG 0.485056 tig0020661:+79547 None:intergenic
TTGAACAGAAAGGATGGAAT+AGG 0.486366 tig0020661:-78458 Msa1384460:CDS
TTGCAGGGAGTAGTGGCATC+AGG 0.488447 tig0020661:-76733 Msa1384460:intron
ATGAATATCAAAGAAGAATG+TGG 0.489445 tig0020661:-79680 Msa1384460:five_prime_UTR
ACCTGTCCTTAAGAAGTATC+CGG 0.489808 tig0020661:-78195 Msa1384460:CDS
TGAATATCAAAGAAGAATGT+GGG 0.490144 tig0020661:-79679 Msa1384460:five_prime_UTR
CATTACTACTACTTTATGTC+AGG 0.491278 tig0020661:-75589 Msa1384460:three_prime_UTR
CAGATATGGTGCATTGATAG+AGG 0.493778 tig0020661:-76694 Msa1384460:CDS
ACCCTGCATATCCAAACTGC+AGG 0.493851 tig0020661:+79364 None:intergenic
ATACAATTTCAGAATAGAAA+AGG 0.499386 tig0020661:-78486 Msa1384460:intron
AAAGAAATTTGCAAGGGAGC+TGG 0.500926 tig0020661:-75826 Msa1384460:CDS
TTATAGGACATTGTTTGTCA+TGG 0.505005 tig0020661:-78241 Msa1384460:CDS
AAGTCCAAAGAAACATGTAT+AGG 0.507011 tig0020661:+78154 None:intergenic
TGTATAGCTGATGCAAAGGT+TGG 0.507289 tig0020661:+78629 None:intergenic
GGGTATAAATATAGTGAAAG+AGG 0.509614 tig0020661:+79578 None:intergenic
CCCTGCAGTTTGGATATGCA+GGG 0.509922 tig0020661:-79365 Msa1384460:CDS
ATTTATTAGGGAGAGCATAA+GGG 0.510005 tig0020661:-75356 Msa1384460:three_prime_UTR
AATTAATTTAAATTTATCAA+AGG 0.510423 tig0020661:-79750 Msa1384460:five_prime_UTR
AAAAGGAAGGAGGAGAAGAA+AGG 0.512453 tig0020661:+79266 None:intergenic
CAATAATATTGCGGTAAACT+GGG 0.512889 tig0020661:+79289 None:intergenic
GCCGGATACTTCTTAAGGAC+AGG 0.515533 tig0020661:+78194 None:intergenic
AAGCTTGTGTGTTTATGAAT+GGG 0.517113 tig0020661:-75566 Msa1384460:three_prime_UTR
CTGGGATTGGGAGATGCAAA+AGG 0.517390 tig0020661:-78293 Msa1384460:CDS
GAGAAGAGTTCTATTTGGGA+GGG 0.519169 tig0020661:-76597 Msa1384460:intron
ACACAGGATTACAGCCAACC+AGG 0.519218 tig0020661:-78684 Msa1384460:intron
GGTTGTCTTGTCAGCAAAGG+AGG 0.520471 tig0020661:-79710 Msa1384460:five_prime_UTR
CTGATTATGTTACTATGCTC+CGG 0.528035 tig0020661:+75786 None:intergenic
TTCTCATGGCAGTCTTACTC+AGG 0.530591 tig0020661:-78583 Msa1384460:intron
GGAGAAGAGTTCTATTTGGG+AGG 0.530894 tig0020661:-76598 Msa1384460:CDS
TGGAGCAGTGTTGATCATTG+TGG 0.532059 tig0020661:-75883 Msa1384460:CDS
GAGGAAGTGGTGTGAAGAGG+TGG 0.532337 tig0020661:+79544 None:intergenic
GAAGTGACAGAGAGGCGAGC+CGG 0.532938 tig0020661:+78176 None:intergenic
AGAAAGTTGAAAGTAATAGC+TGG 0.533149 tig0020661:+79082 None:intergenic
CTGGGATAACATGTAGAATG+AGG 0.538002 tig0020661:-75511 Msa1384460:three_prime_UTR
CTTGTCAGCAAAGGAGGGTG+TGG 0.539463 tig0020661:-79704 Msa1384460:five_prime_UTR
ACCTCTTCTCCCTTCATCAA+CGG 0.543925 tig0020661:-75727 Msa1384460:CDS
AATGATATTGCAGGGAGTAG+TGG 0.547741 tig0020661:-76740 Msa1384460:intron
AAGAGGTGGTGGAAGAGTAA+GGG 0.557973 tig0020661:+79558 None:intergenic
CTAAGAAGTAGGCAAAAGGA+AGG 0.557992 tig0020661:+79253 None:intergenic
AATGATGATATTAGAACAAG+AGG 0.559613 tig0020661:+79835 None:intergenic
GGAACTGGACTGTATATTGT+TGG 0.563287 tig0020661:+78374 None:intergenic
AGAACTCTTCTCCTAAAGCA+AGG 0.563349 tig0020661:+76608 None:intergenic
TCCAAACTGCAGGGCCAACA+TGG 0.564674 tig0020661:+79374 None:intergenic
GATACACCGCAACGAAAACT+GGG 0.571780 tig0020661:+76668 None:intergenic
GCTAGATCATAATACAGTAA+TGG 0.572199 tig0020661:-79463 Msa1384460:exon
ACCAGCCATTACATTTCTCA+TGG 0.574113 tig0020661:-78597 Msa1384460:CDS
GGCAGCAATCACTTCCACTC+CGG 0.576279 tig0020661:-75805 Msa1384460:CDS
ACGAAGAAAAGAAATTTGCA+AGG 0.577476 tig0020661:-75833 Msa1384460:CDS
TAAGATTATTAAGAATGGAG+AGG 0.577880 tig0020661:+79525 None:intergenic
TCCGTTGATGAAGGGAGAAG+AGG 0.579930 tig0020661:+75726 None:intergenic
CACAGGATTACAGCCAACCA+GGG 0.585971 tig0020661:-78683 Msa1384460:intron
ACCTGTTCAAACTCTTGTTG+TGG 0.587524 tig0020661:-76644 Msa1384460:CDS
CTATAAGGTACAAACATCCA+AGG 0.588308 tig0020661:+78258 None:intergenic
GTGCGGTTGAACAGAAAGGA+TGG 0.591081 tig0020661:-78464 Msa1384460:CDS
AAAGGTGCGGTTGAACAGAA+AGG 0.592072 tig0020661:-78468 Msa1384460:CDS
GACTGCCATGAGAAATGTAA+TGG 0.593326 tig0020661:+78592 None:intergenic
TCAATCTCAATCTCATCACT+GGG 0.594573 tig0020661:-78311 Msa1384460:CDS
TAGTAATGTATATCTGGCCA+TGG 0.596808 tig0020661:+75604 None:intergenic
GTGCAGCTCTTGAGACGACA+TGG 0.599138 tig0020661:+79340 None:intergenic
GGAGAGGAAGTGGTGTGAAG+AGG 0.599156 tig0020661:+79541 None:intergenic
CAGAAAGGATGGAATAGGAA+AGG 0.600178 tig0020661:-78453 Msa1384460:CDS
AAATGAAGAAAATGCTACCA+TGG 0.600596 tig0020661:-75621 Msa1384460:three_prime_UTR
GAACTCTTCTCCTAAAGCAA+GGG 0.601075 tig0020661:+76609 None:intergenic
AGCCAAGCAAGTAGAAACCC+TGG 0.603068 tig0020661:+78666 None:intergenic
CGAAGAAAAGAAATTTGCAA+GGG 0.607837 tig0020661:-75832 Msa1384460:CDS
TTAATGCTGCTGTTTAGAGG+TGG 0.608851 tig0020661:+78353 None:intergenic
GATGGAATAGGAAAGGTGGC+AGG 0.613834 tig0020661:-78446 Msa1384460:CDS
GGAGGTTGTCTTGTCAGCAA+AGG 0.620039 tig0020661:-79713 Msa1384460:five_prime_UTR
ATTCTGTATAGCTGATGCAA+AGG 0.622901 tig0020661:+78625 None:intergenic
GCCATGAGAAATGTAATGGC+TGG 0.624808 tig0020661:+78596 None:intergenic
GTATAAATATAGTGAAAGAG+GGG 0.626247 tig0020661:+79580 None:intergenic
ACAGTAATGGCTGATTCAGG+TGG 0.627179 tig0020661:-79450 Msa1384460:exon
GAAGAAAGGCAATAATATTG+CGG 0.628252 tig0020661:+79280 None:intergenic
ATTTCAGAATAGAAAAGGTG+CGG 0.629935 tig0020661:-78481 Msa1384460:intron
GGGTTATACCTAGTGTTGTG+GGG 0.633805 tig0020661:-75861 Msa1384460:CDS
AGAAGTAGGCAAAAGGAAGG+AGG 0.634893 tig0020661:+79256 None:intergenic
GTTGTCTTGTCAGCAAAGGA+GGG 0.640114 tig0020661:-79709 Msa1384460:five_prime_UTR
CTGATTCAGGTGGATCTTCG+GGG 0.648140 tig0020661:-79440 Msa1384460:CDS
AGAACGGTTTCAGCTGCATG+CGG 0.650802 tig0020661:-79397 Msa1384460:CDS
TCAAGAGCTGCACTTAACAT+GGG 0.652569 tig0020661:-79330 Msa1384460:CDS
TATAAGGTACAAACATCCAA+GGG 0.653632 tig0020661:+78259 None:intergenic
CCCTGCATATCCAAACTGCA+GGG 0.660971 tig0020661:+79365 None:intergenic
AAGCAAGTAGAAACCCTGGT+TGG 0.660998 tig0020661:+78670 None:intergenic
AAAGGATGGAATAGGAAAGG+TGG 0.662240 tig0020661:-78450 Msa1384460:CDS
TATGTTACTATGCTCCGGAG+TGG 0.664769 tig0020661:+75791 None:intergenic
TGTGTTGCTCCATACCAGAA+CGG 0.668663 tig0020661:-79413 Msa1384460:CDS
ATATGGTGCATTGATAGAGG+AGG 0.677684 tig0020661:-76691 Msa1384460:CDS
GAGCAGTGTTGATCATTGTG+GGG 0.677789 tig0020661:-75881 Msa1384460:CDS
CTAAACAGCAGCATTAATGG+TGG 0.679207 tig0020661:-78347 Msa1384460:CDS
TCAGTGATTACACTATACAA+AGG 0.680062 tig0020661:-78398 Msa1384460:CDS
ATGTATAGGAAGTGACAGAG+AGG 0.721692 tig0020661:+78168 None:intergenic
AATTCAAAGAGATCATAACA+GGG 0.726017 tig0020661:+79798 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATAAGATTATTAAGAA+TGG + tig0020661:75571-75590 None:intergenic 10.0%
!! TATAATCTAAATTTATATTG+TGG - tig0020661:76193-76212 Msa1384460:intron 10.0%
!! AATTAAAATGAATGAATTAA+GGG + tig0020661:76549-76568 None:intergenic 10.0%
!! AAATTAAAATGAATGAATTA+AGG + tig0020661:76550-76569 None:intergenic 10.0%
!! ACAAAATAATAATATATTTC+CGG + tig0020661:77172-77191 None:intergenic 10.0%
!! ATTTATTAAAACCAAATATA+GGG + tig0020661:77268-77287 None:intergenic 10.0%
!! TATTTATTAAAACCAAATAT+AGG + tig0020661:77269-77288 None:intergenic 10.0%
!!! TTGGTTTTAATAAATATTAT+TGG - tig0020661:77273-77292 Msa1384460:intron 10.0%
!!! AGTAGATATAATATTTTTTA+AGG - tig0020661:77523-77542 Msa1384460:intron 10.0%
!!! GTAGATATAATATTTTTTAA+GGG - tig0020661:77524-77543 Msa1384460:intron 10.0%
!!! TAGATATAATATTTTTTAAG+GGG - tig0020661:77525-77544 Msa1384460:intron 10.0%
!! ATTTATACTATGTTAATTAG+TGG + tig0020661:75885-75904 None:intergenic 15.0%
!! AAATTAACATACATAAAAGT+TGG - tig0020661:75901-75920 Msa1384460:intron 15.0%
!! TATTATATTGTTAGAAAATG+TGG - tig0020661:76164-76183 Msa1384460:intron 15.0%
!! TTTAAATCAATTATATACTG+CGG - tig0020661:76242-76261 Msa1384460:intron 15.0%
!! ATGAAGCTATATAATTAATA+TGG - tig0020661:76350-76369 Msa1384460:intron 15.0%
!!! ATATATTGGCTTTTATATAT+TGG - tig0020661:77331-77350 Msa1384460:intron 15.0%
!!! TTTTTTTACATAATGATGTT+TGG - tig0020661:77904-77923 Msa1384460:intron 15.0%
!!! TTATATTGATTTTATCTTAG+AGG - tig0020661:78002-78021 Msa1384460:intron 15.0%
!!! ATAATGTTCTAAAGATATAA+TGG - tig0020661:78207-78226 Msa1384460:CDS 15.0%
!! TTAAAAATAAAGCAAAAAGA+GGG + tig0020661:78552-78571 None:intergenic 15.0%
!! ATTAAAAATAAAGCAAAAAG+AGG + tig0020661:78553-78572 None:intergenic 15.0%
!! TTATAATAAAATAAAATGCG+TGG + tig0020661:78691-78710 None:intergenic 15.0%
!!! TTTTCTTTTGTAATAAAGAT+AGG + tig0020661:79120-79139 None:intergenic 15.0%
!! TATTACAAAAGAAAAAGAAA+TGG - tig0020661:79125-79144 Msa1384460:intron 15.0%
!! ATTCATAAAAGTTATTTACA+AGG + tig0020661:79154-79173 None:intergenic 15.0%
!!! TTGTAAATAACTTTTATGAA+TGG - tig0020661:79153-79172 Msa1384460:intron 15.0%
!! CTTGAAAAGATTTAAAAAAT+AGG - tig0020661:79433-79452 Msa1384460:CDS 15.0%
!! AACCATTAATTAACATATAT+AGG + tig0020661:79673-79692 None:intergenic 15.0%
!! TTTGGTAAACAAAATTTATT+AGG - tig0020661:79719-79738 Msa1384460:five_prime_UTR 15.0%
!! TTGGTAAACAAAATTTATTA+GGG - tig0020661:79720-79739 Msa1384460:five_prime_UTR 15.0%
!!! ATTTTTGTTCAATTATAGTT+TGG + tig0020661:79824-79843 None:intergenic 15.0%
!! TGTTCTAATATCATCATTAA+TGG - tig0020661:75258-75277 Msa1384460:three_prime_UTR 20.0%
!! AACTTATGTTATGTATTGTA+CGG + tig0020661:75929-75948 None:intergenic 20.0%
!!! TTTTACTTTAATAATGAGTG+GGG + tig0020661:76077-76096 None:intergenic 20.0%
!!! CTTTTACTTTAATAATGAGT+GGG + tig0020661:76078-76097 None:intergenic 20.0%
!!! TCTTTTACTTTAATAATGAG+TGG + tig0020661:76079-76098 None:intergenic 20.0%
!! AGAAGTAAAAAAAAAAACGA+TGG - tig0020661:76096-76115 Msa1384460:intron 20.0%
!!! TCTTTTAAGTATAACAAAAC+AGG + tig0020661:76308-76327 None:intergenic 20.0%
!! ATACAATTTCAGAATAGAAA+AGG - tig0020661:76602-76621 Msa1384460:CDS 20.0%
!! ATATATAAAGACAACTCTAA+CGG + tig0020661:77317-77336 None:intergenic 20.0%
!! TTAGAGTTGTCTTTATATAT+TGG - tig0020661:77317-77336 Msa1384460:intron 20.0%
!! ATCTAAAAGTCTAAAAACAT+TGG - tig0020661:77383-77402 Msa1384460:intron 20.0%
!! TCTAAAAGTCTAAAAACATT+GGG - tig0020661:77384-77403 Msa1384460:intron 20.0%
!! CATTGTTAATACTAAATATG+CGG + tig0020661:77495-77514 None:intergenic 20.0%
!! GATGAAATTTCATATAATCT+TGG + tig0020661:77626-77645 None:intergenic 20.0%
!! GAATAAAAAACCTAATGATA+TGG - tig0020661:77653-77672 Msa1384460:intron 20.0%
!! AATTTACATCTTAATAAAGC+TGG - tig0020661:78036-78055 Msa1384460:intron 20.0%
!! AATGTATATTAGTAGTACAT+AGG + tig0020661:78311-78330 None:intergenic 20.0%
!! TTAATATACAATGATATTGC+AGG - tig0020661:78339-78358 Msa1384460:CDS 20.0%
!! TAATATACAATGATATTGCA+GGG - tig0020661:78340-78359 Msa1384460:CDS 20.0%
!! GAAAATGAATGAAAAAGATA+AGG + tig0020661:78530-78549 None:intergenic 20.0%
!! TATGTATGTGATGAAATTAA+AGG + tig0020661:78596-78615 None:intergenic 20.0%
!! CATAGATGTCAATTAAATTT+GGG - tig0020661:79623-79642 Msa1384460:five_prime_UTR 20.0%
!! TTAACATATATAGGCATAAT+GGG + tig0020661:79664-79683 None:intergenic 20.0%
!! ATTAACATATATAGGCATAA+TGG + tig0020661:79665-79684 None:intergenic 20.0%
!! TGCCTATATATGTTAATTAA+TGG - tig0020661:79668-79687 Msa1384460:five_prime_UTR 20.0%
!!! TTAATGGTTTTATTTACAGA+AGG - tig0020661:79684-79703 Msa1384460:five_prime_UTR 20.0%
!!! TCTTAATCTTTTCGATTTAA+TGG + tig0020661:79768-79787 None:intergenic 20.0%
! AATTCAAAGAGATCATAACA+GGG + tig0020661:75293-75312 None:intergenic 25.0%
! AAATTCAAAGAGATCATAAC+AGG + tig0020661:75294-75313 None:intergenic 25.0%
!!! TTATCAAAGGTTTTTAAGTG+CGG - tig0020661:75351-75370 Msa1384460:three_prime_UTR 25.0%
! ATGAATATCAAAGAAGAATG+TGG - tig0020661:75408-75427 Msa1384460:three_prime_UTR 25.0%
! TGAATATCAAAGAAGAATGT+GGG - tig0020661:75409-75428 Msa1384460:three_prime_UTR 25.0%
! GTATAAATATAGTGAAAGAG+GGG + tig0020661:75511-75530 None:intergenic 25.0%
! GGTATAAATATAGTGAAAGA+GGG + tig0020661:75512-75531 None:intergenic 25.0%
! TAAGATTATTAAGAATGGAG+AGG + tig0020661:75566-75585 None:intergenic 25.0%
!!! TAACTAGCTAGTCTTTTAAT+TGG + tig0020661:75605-75624 None:intergenic 25.0%
! AATTAGTGGAGGTAATATAT+AGG + tig0020661:75871-75890 None:intergenic 25.0%
! TATACTATGTTAATTAGTGG+AGG + tig0020661:75882-75901 None:intergenic 25.0%
!!! ATAGTTCTACTTTTTTGTTC+AGG - tig0020661:75974-75993 Msa1384460:intron 25.0%
! AAAAAAAACGATGGAAATCA+TGG - tig0020661:76105-76124 Msa1384460:intron 25.0%
!!! ATGGTTTTAAATTACAGTTG+TGG - tig0020661:76124-76143 Msa1384460:intron 25.0%
! AAATGAAATTTGCATTACAC+AGG - tig0020661:76388-76407 Msa1384460:intron 25.0%
! TCAAAGCAATAATGAGAAAT+TGG + tig0020661:76962-76981 None:intergenic 25.0%
!! AGTTTTTACTATTTTGTACG+CGG - tig0020661:77028-77047 Msa1384460:intron 25.0%
! TATACTTTCAAAGTGACTTT+GGG - tig0020661:77228-77247 Msa1384460:intron 25.0%
! TATATAAAGACAACTCTAAC+GGG + tig0020661:77316-77335 None:intergenic 25.0%
!!! TTTTATATATTGGCCTTTAG+TGG - tig0020661:77341-77360 Msa1384460:intron 25.0%
! CTAAAAGTCTAAAAACATTG+GGG - tig0020661:77385-77404 Msa1384460:intron 25.0%
!!! CACTATTTTTATCCAATATG+TGG - tig0020661:77429-77448 Msa1384460:intron 25.0%
!!! TTCATTTTGACCATATCATT+AGG + tig0020661:77666-77685 None:intergenic 25.0%
! AAGATGTAAATTCTGATGTA+TGG + tig0020661:78028-78047 None:intergenic 25.0%
!!! CACTTTGTAGTCTTTTTTTT+TGG - tig0020661:78064-78083 Msa1384460:CDS 25.0%
!!! TGTTCTAAAGATATAATGGT+AGG - tig0020661:78211-78230 Msa1384460:CDS 25.0%
!!! TTCATTTGTCGTTTTCAAAA+TGG + tig0020661:78757-78776 None:intergenic 25.0%
!! CTATTATTACAAAGCACTAT+TGG - tig0020661:78860-78879 Msa1384460:intron 25.0%
!!! TTTAAACTTTTTTGACCCTA+TGG + tig0020661:79065-79084 None:intergenic 25.0%
!!! AATCTTTTCAAGATAATGCT+GGG + tig0020661:79425-79444 None:intergenic 25.0%
!!! AAATCTTTTCAAGATAATGC+TGG + tig0020661:79426-79445 None:intergenic 25.0%
! AAGTAGTAGTAATGTATATC+TGG + tig0020661:79493-79512 None:intergenic 25.0%
!!! ATGTAGAATGAGGTTTTTTA+TGG - tig0020661:79587-79606 Msa1384460:five_prime_UTR 25.0%
!!! TGTAGAATGAGGTTTTTTAT+GGG - tig0020661:79588-79607 Msa1384460:five_prime_UTR 25.0%
! CCAAATTTAATTGACATCTA+TGG + tig0020661:79625-79644 None:intergenic 25.0%
! CCATAGATGTCAATTAAATT+TGG - tig0020661:79622-79641 Msa1384460:five_prime_UTR 25.0%
!!! AGAAGGATATTATTTTGCTT+TGG - tig0020661:79701-79720 Msa1384460:five_prime_UTR 25.0%
! GTTGACAAAACGTCTTTTTA+TGG - tig0020661:75465-75484 Msa1384460:three_prime_UTR 30.0%
GGGTATAAATATAGTGAAAG+AGG + tig0020661:75513-75532 None:intergenic 30.0%
GCTAGATCATAATACAGTAA+TGG - tig0020661:75625-75644 Msa1384460:three_prime_UTR 30.0%
CAATAATATTGCGGTAAACT+GGG + tig0020661:75802-75821 None:intergenic 30.0%
GAAGAAAGGCAATAATATTG+CGG + tig0020661:75811-75830 None:intergenic 30.0%
!! TTTTCTAAGAAGTAGGCAAA+AGG + tig0020661:75842-75861 None:intergenic 30.0%
!! GACTAACTTTTCTAAGAAGT+AGG + tig0020661:75849-75868 None:intergenic 30.0%
!!! TTCTACTTTTTTGTTCAGGA+AGG - tig0020661:75978-75997 Msa1384460:intron 30.0%
AGAAAGTTGAAAGTAATAGC+TGG + tig0020661:76009-76028 None:intergenic 30.0%
!! GTTTTAAATTACAGTTGTGG+TGG - tig0020661:76127-76146 Msa1384460:intron 30.0%
! TTTGCAATTTGAAACCATGA+TGG - tig0020661:76266-76285 Msa1384460:intron 30.0%
ATTTCAGAATAGAAAAGGTG+CGG - tig0020661:76607-76626 Msa1384460:CDS 30.0%
TCAGTGATTACACTATACAA+AGG - tig0020661:76690-76709 Msa1384460:CDS 30.0%
TATAAGGTACAAACATCCAA+GGG + tig0020661:76832-76851 None:intergenic 30.0%
ATGACAAACAATGTCCTATA+AGG + tig0020661:76848-76867 None:intergenic 30.0%
TTATAGGACATTGTTTGTCA+TGG - tig0020661:76847-76866 Msa1384460:intron 30.0%
ACTTCCTATACATGTTTCTT+TGG - tig0020661:76930-76949 Msa1384460:intron 30.0%
AAGTCCAAAGAAACATGTAT+AGG + tig0020661:76937-76956 None:intergenic 30.0%
TAGAAAATCAAACATGTGTC+CGG - tig0020661:77150-77169 Msa1384460:intron 30.0%
!!! CACTGTTTTTTTCTTCTTTC+CGG - tig0020661:77202-77221 Msa1384460:intron 30.0%
! TCACTTTGAAAGTATACTTC+CGG + tig0020661:77224-77243 None:intergenic 30.0%
GTATACTTTCAAAGTGACTT+TGG - tig0020661:77227-77246 Msa1384460:intron 30.0%
ATACTTTCAAAGTGACTTTG+GGG - tig0020661:77229-77248 Msa1384460:intron 30.0%
ATATAAAGACAACTCTAACG+GGG + tig0020661:77315-77334 None:intergenic 30.0%
AATAGTGCTAAAAACATGTG+AGG + tig0020661:77416-77435 None:intergenic 30.0%
TCATAAATATACAGTGACCA+AGG + tig0020661:77753-77772 None:intergenic 30.0%
! AAGTTAATTTTGAGCTAAGC+GGG + tig0020661:77838-77857 None:intergenic 30.0%
! GAAGTTAATTTTGAGCTAAG+CGG + tig0020661:77839-77858 None:intergenic 30.0%
AAAAAAGACTACAAAGTGCA+TGG + tig0020661:78062-78081 None:intergenic 30.0%
TTTAGGAGAAGAGTTCTATT+TGG - tig0020661:78486-78505 Msa1384460:intron 30.0%
TTAGGAGAAGAGTTCTATTT+GGG - tig0020661:78487-78506 Msa1384460:intron 30.0%
ATGAAAAAGATAAGGTAGCT+AGG + tig0020661:78522-78541 None:intergenic 30.0%
! TGTAGTCTTGATAACTTTCA+TGG - tig0020661:78664-78683 Msa1384460:CDS 30.0%
!!! AATAGCTAGCCTTTTTTCTT+AGG + tig0020661:78845-78864 None:intergenic 30.0%
TTAATGATTCCATGTTCCAT+AGG - tig0020661:79046-79065 Msa1384460:intron 30.0%
TAATGATTCCATGTTCCATA+GGG - tig0020661:79047-79066 Msa1384460:intron 30.0%
ACGAAGAAAAGAAATTTGCA+AGG - tig0020661:79255-79274 Msa1384460:CDS 30.0%
CGAAGAAAAGAAATTTGCAA+GGG - tig0020661:79256-79275 Msa1384460:CDS 30.0%
!! AAACATTTTCCGTTGATGAA+GGG + tig0020661:79373-79392 None:intergenic 30.0%
GAAAACTCTAAACTTGAAAC+TGG - tig0020661:79399-79418 Msa1384460:CDS 30.0%
AAATGAAGAAAATGCTACCA+TGG - tig0020661:79467-79486 Msa1384460:five_prime_UTR 30.0%
CATTACTACTACTTTATGTC+AGG - tig0020661:79499-79518 Msa1384460:five_prime_UTR 30.0%
AAGCTTGTGTGTTTATGAAT+GGG - tig0020661:79522-79541 Msa1384460:five_prime_UTR 30.0%
!! TTTATGAATGGGTTTGCTTT+TGG - tig0020661:79533-79552 Msa1384460:five_prime_UTR 30.0%
! AATTCAAAGTGCTTTCTTAC+TGG - tig0020661:79558-79577 Msa1384460:five_prime_UTR 30.0%
! ATTCAAAGTGCTTTCTTACT+GGG - tig0020661:79559-79578 Msa1384460:five_prime_UTR 30.0%
! AATTTATTAGGGAGAGCATA+AGG - tig0020661:79731-79750 Msa1384460:five_prime_UTR 30.0%
! ATTTATTAGGGAGAGCATAA+GGG - tig0020661:79732-79751 Msa1384460:five_prime_UTR 30.0%
! AAAGACGTTTTGTCAACTGT+TGG + tig0020661:75462-75481 None:intergenic 35.0%
! ACGTCTTTTTATGGTCATTG+TGG - tig0020661:75474-75493 Msa1384460:three_prime_UTR 35.0%
! CGTCTTTTTATGGTCATTGT+GGG - tig0020661:75475-75494 Msa1384460:three_prime_UTR 35.0%
! GTCTTTTTATGGTCATTGTG+GGG - tig0020661:75476-75495 Msa1384460:three_prime_UTR 35.0%
TATTAAGAATGGAGAGGAAG+TGG + tig0020661:75560-75579 None:intergenic 35.0%
! AATACAGTAATGGCTGATTC+AGG - tig0020661:75635-75654 Msa1384460:three_prime_UTR 35.0%
GCAATAATATTGCGGTAAAC+TGG + tig0020661:75803-75822 None:intergenic 35.0%
! GAAACCATGATGGAAACATT+AGG - tig0020661:76276-76295 Msa1384460:intron 35.0%
CAATCCTAATGTTTCCATCA+TGG + tig0020661:76283-76302 None:intergenic 35.0%
TATATAGCTTCATGACAACG+TGG + tig0020661:76343-76362 None:intergenic 35.0%
ATTCTGTATAGCTGATGCAA+AGG + tig0020661:76466-76485 None:intergenic 35.0%
TTGAACAGAAAGGATGGAAT+AGG - tig0020661:76630-76649 Msa1384460:CDS 35.0%
TCAATCTCAATCTCATCACT+GGG - tig0020661:76777-76796 Msa1384460:intron 35.0%
GAGATGCAAAAGGAAAAAAC+TGG - tig0020661:76805-76824 Msa1384460:intron 35.0%
CTATAAGGTACAAACATCCA+AGG + tig0020661:76833-76852 None:intergenic 35.0%
CTTGGATGTTTGTACCTTAT+AGG - tig0020661:76831-76850 Msa1384460:intron 35.0%
! AAAGTGACTTTGGGGAATAT+AGG - tig0020661:77237-77256 Msa1384460:intron 35.0%
TATAGGAAGCTCCCTATATT+TGG - tig0020661:77254-77273 Msa1384460:intron 35.0%
TGAAAACGAAGTCCACATAT+TGG + tig0020661:77444-77463 None:intergenic 35.0%
!!! TTGTTTTTGCATCAAGTCCT+TGG - tig0020661:77733-77752 Msa1384460:intron 35.0%
! TCTCTACACCAAAAAGCATA+AGG + tig0020661:77867-77886 None:intergenic 35.0%
! AACTCTTGTTGTGGCTATTA+TGG - tig0020661:78453-78472 Msa1384460:CDS 35.0%
TTCTTAGGAGTAAGTCCTAA+AGG + tig0020661:78830-78849 None:intergenic 35.0%
GGACTTACTCCTAAGAAAAA+AGG - tig0020661:78833-78852 Msa1384460:intron 35.0%
!!! TTTTTTGACCCTATGGAACA+TGG + tig0020661:79058-79077 None:intergenic 35.0%
ATCCTGTAACATCACAAATG+TGG + tig0020661:79182-79201 None:intergenic 35.0%
TTGTGATGTTACAGGATCAT+TGG - tig0020661:79185-79204 Msa1384460:intron 35.0%
CTGATTATGTTACTATGCTC+CGG + tig0020661:79305-79324 None:intergenic 35.0%
!!! AAAGTGATGTTTTGGCATGA+TGG + tig0020661:79337-79356 None:intergenic 35.0%
! AGGTTGAGAAAGTGATGTTT+TGG + tig0020661:79345-79364 None:intergenic 35.0%
!! CAAACATTTTCCGTTGATGA+AGG + tig0020661:79374-79393 None:intergenic 35.0%
TAGTAATGTATATCTGGCCA+TGG + tig0020661:79487-79506 None:intergenic 35.0%
GAAGCTTGTGTGTTTATGAA+TGG - tig0020661:79521-79540 Msa1384460:five_prime_UTR 35.0%
! TATAGGCATAATGGGATTTC+AGG + tig0020661:79656-79675 None:intergenic 35.0%
!!! TCAAAGGTTTTTAAGTGCGG+TGG - tig0020661:75354-75373 Msa1384460:three_prime_UTR 40.0%
TCAAGAGCTGCACTTAACAT+GGG - tig0020661:75758-75777 Msa1384460:CDS 40.0%
AAAAGGAAGGAGGAGAAGAA+AGG + tig0020661:75825-75844 None:intergenic 40.0%
CTAAGAAGTAGGCAAAAGGA+AGG + tig0020661:75838-75857 None:intergenic 40.0%
!!! CTTTTTTGTTCAGGAAGGAG+AGG - tig0020661:75983-76002 Msa1384460:intron 40.0%
AAAAATTGCATACCCGACGA+GGG + tig0020661:76052-76071 None:intergenic 40.0%
AAAAAATTGCATACCCGACG+AGG + tig0020661:76053-76072 None:intergenic 40.0%
TGTATAGCTGATGCAAAGGT+TGG + tig0020661:76462-76481 None:intergenic 40.0%
ACCAGCCATTACATTTCTCA+TGG - tig0020661:76491-76510 Msa1384460:intron 40.0%
GACTGCCATGAGAAATGTAA+TGG + tig0020661:76499-76518 None:intergenic 40.0%
CAGAAAGGATGGAATAGGAA+AGG - tig0020661:76635-76654 Msa1384460:CDS 40.0%
AAAGGATGGAATAGGAAAGG+TGG - tig0020661:76638-76657 Msa1384460:CDS 40.0%
!! GGAACATTGTTTTGTGTTGC+AGG - tig0020661:76663-76682 Msa1384460:CDS 40.0%
GGAACTGGACTGTATATTGT+TGG + tig0020661:76717-76736 None:intergenic 40.0%
! TTAATGCTGCTGTTTAGAGG+TGG + tig0020661:76738-76757 None:intergenic 40.0%
! CCATTAATGCTGCTGTTTAG+AGG + tig0020661:76741-76760 None:intergenic 40.0%
CCTCTAAACAGCAGCATTAA+TGG - tig0020661:76738-76757 Msa1384460:intron 40.0%
CTAAACAGCAGCATTAATGG+TGG - tig0020661:76741-76760 Msa1384460:intron 40.0%
CTCAATCTCAATCTCATCAC+TGG - tig0020661:76776-76795 Msa1384460:intron 40.0%
TCAATCTCATCACTGGGATT+GGG - tig0020661:76783-76802 Msa1384460:intron 40.0%
AAAGGAAAAAACTGGACCCT+TGG - tig0020661:76813-76832 Msa1384460:intron 40.0%
ATTGTTTGTCATGGTCTGGT+TGG - tig0020661:76856-76875 Msa1384460:intron 40.0%
!! ACCTGTCCTTAAGAAGTATC+CGG - tig0020661:76893-76912 Msa1384460:intron 40.0%
ATGTATAGGAAGTGACAGAG+AGG + tig0020661:76923-76942 None:intergenic 40.0%
!! CAGGCTTGGATTTTTCAATC+TGG - tig0020661:76999-77018 Msa1384460:intron 40.0%
!! GCTTGGATTTTTCAATCTGG+TGG - tig0020661:77002-77021 Msa1384460:intron 40.0%
GCCTTTAGTGGTCTAAACTT+GGG - tig0020661:77353-77372 Msa1384460:intron 40.0%
CCTTTAGTGGTCTAAACTTG+GGG - tig0020661:77354-77373 Msa1384460:intron 40.0%
GAAGCTACAACTTGTAGCAT+CGG - tig0020661:77771-77790 Msa1384460:intron 40.0%
AATGATATTGCAGGGAGTAG+TGG - tig0020661:78348-78367 Msa1384460:CDS 40.0%
TTGCATTCGCTGTACAGATA+TGG - tig0020661:78380-78399 Msa1384460:CDS 40.0%
! CAGATATGGTGCATTGATAG+AGG - tig0020661:78394-78413 Msa1384460:CDS 40.0%
! ATATGGTGCATTGATAGAGG+AGG - tig0020661:78397-78416 Msa1384460:CDS 40.0%
ACCTGTTCAAACTCTTGTTG+TGG - tig0020661:78444-78463 Msa1384460:CDS 40.0%
ATTATGGCTTCCCTTGCTTT+AGG - tig0020661:78469-78488 Msa1384460:CDS 40.0%
GAACTCTTCTCCTAAAGCAA+GGG + tig0020661:78482-78501 None:intergenic 40.0%
AGAACTCTTCTCCTAAAGCA+AGG + tig0020661:78483-78502 None:intergenic 40.0%
GAGAAGAGTTCTATTTGGGA+GGG - tig0020661:78491-78510 Msa1384460:intron 40.0%
AATGGCGATCATTCATCTGT+TGG + tig0020661:78739-78758 None:intergenic 40.0%
CAACTAGTAAGCTAGAGCTA+AGG - tig0020661:78788-78807 Msa1384460:intron 40.0%
TGCCACATTTGTGATGTTAC+AGG - tig0020661:79177-79196 Msa1384460:intron 40.0%
AAAGAAATTTGCAAGGGAGC+TGG - tig0020661:79262-79281 Msa1384460:CDS 40.0%
CGGAGCATAGTAACATAATC+AGG - tig0020661:79303-79322 Msa1384460:CDS 40.0%
CTGGGATAACATGTAGAATG+AGG - tig0020661:79577-79596 Msa1384460:five_prime_UTR 40.0%
!!! AAGGTTTTTAAGTGCGGTGG+AGG - tig0020661:75357-75376 Msa1384460:three_prime_UTR 45.0%
GTTGTCTTGTCAGCAAAGGA+GGG - tig0020661:75379-75398 Msa1384460:three_prime_UTR 45.0%
!! AAGAGGTGGTGGAAGAGTAA+GGG + tig0020661:75533-75552 None:intergenic 45.0%
! ACAGTAATGGCTGATTCAGG+TGG - tig0020661:75638-75657 Msa1384460:three_prime_UTR 45.0%
! TGTGTTGCTCCATACCAGAA+CGG - tig0020661:75675-75694 Msa1384460:three_prime_UTR 45.0%
CTCAAGAGCTGCACTTAACA+TGG - tig0020661:75757-75776 Msa1384460:CDS 45.0%
AGAAGTAGGCAAAAGGAAGG+AGG + tig0020661:75835-75854 None:intergenic 45.0%
! TTCTTTTGTCTTGCCCTCGT+CGG - tig0020661:76036-76055 Msa1384460:intron 45.0%
AAGCAAGTAGAAACCCTGGT+TGG + tig0020661:76421-76440 None:intergenic 45.0%
AACCAGGGTTTCTACTTGCT+TGG - tig0020661:76420-76439 Msa1384460:intron 45.0%
GCCATGAGAAATGTAATGGC+TGG + tig0020661:76495-76514 None:intergenic 45.0%
TTCTCATGGCAGTCTTACTC+AGG - tig0020661:76505-76524 Msa1384460:intron 45.0%
! AAAGGTGCGGTTGAACAGAA+AGG - tig0020661:76620-76639 Msa1384460:CDS 45.0%
CTCAATCTCATCACTGGGAT+TGG - tig0020661:76782-76801 Msa1384460:intron 45.0%
GGACATTGTTTGTCATGGTC+TGG - tig0020661:76852-76871 Msa1384460:intron 45.0%
GATCCTTGAAAGAGATGCTC+AGG - tig0020661:76980-76999 Msa1384460:intron 45.0%
AAGCCTGAGCATCTCTTTCA+AGG + tig0020661:76986-77005 None:intergenic 45.0%
TTGAAAGAGATGCTCAGGCT+TGG - tig0020661:76985-77004 Msa1384460:intron 45.0%
GGCCTTTAGTGGTCTAAACT+TGG - tig0020661:77352-77371 Msa1384460:intron 45.0%
CCCCAAGTTTAGACCACTAA+AGG + tig0020661:77357-77376 None:intergenic 45.0%
! TTTTGAGCTAAGCGGGTGTT+TGG + tig0020661:77831-77850 None:intergenic 45.0%
! TTCGCTCGCCTTATGCTTTT+TGG - tig0020661:77856-77875 Msa1384460:intron 45.0%
GATACACCGCAACGAAAACT+GGG + tig0020661:78423-78442 None:intergenic 45.0%
TGATACACCGCAACGAAAAC+TGG + tig0020661:78424-78443 None:intergenic 45.0%
GCCACAACAAGAGTTTGAAC+AGG + tig0020661:78448-78467 None:intergenic 45.0%
GGAGAAGAGTTCTATTTGGG+AGG - tig0020661:78490-78509 Msa1384460:intron 45.0%
! AGCTAGAGCTAAGGCACTAT+TGG - tig0020661:78797-78816 Msa1384460:intron 45.0%
! GCTAGAGCTAAGGCACTATT+GGG - tig0020661:78798-78817 Msa1384460:intron 45.0%
! AGCTAAGGCACTATTGGGTT+GGG - tig0020661:78803-78822 Msa1384460:intron 45.0%
!! ACTATTGGGTTGGGACCTTT+AGG - tig0020661:78812-78831 Msa1384460:intron 45.0%
!! TGGAGCAGTGTTGATCATTG+TGG - tig0020661:79205-79224 Msa1384460:intron 45.0%
!! GGAGCAGTGTTGATCATTGT+GGG - tig0020661:79206-79225 Msa1384460:intron 45.0%
!! GAGCAGTGTTGATCATTGTG+GGG - tig0020661:79207-79226 Msa1384460:intron 45.0%
TGGGGTTATACCTAGTGTTG+TGG - tig0020661:79225-79244 Msa1384460:intron 45.0%
GGGGTTATACCTAGTGTTGT+GGG - tig0020661:79226-79245 Msa1384460:intron 45.0%
GGGTTATACCTAGTGTTGTG+GGG - tig0020661:79227-79246 Msa1384460:intron 45.0%
! CGTTTTTACCCCACAACACT+AGG + tig0020661:79238-79257 None:intergenic 45.0%
TATGTTACTATGCTCCGGAG+TGG + tig0020661:79300-79319 None:intergenic 45.0%
!!! TGTTTTGGCATGATGGCTTG+AGG + tig0020661:79330-79349 None:intergenic 45.0%
ACCTCTTCTCCCTTCATCAA+CGG - tig0020661:79361-79380 Msa1384460:CDS 45.0%
!! AATTAATTTAAATTTATCAA+AGG - tig0020661:75338-75357 Msa1384460:three_prime_UTR 5.0%
!!! AAATATTATATCTATTTTTT+TGG + tig0020661:77572-77591 None:intergenic 5.0%
GGAGGTTGTCTTGTCAGCAA+AGG - tig0020661:75375-75394 Msa1384460:three_prime_UTR 50.0%
GGTTGTCTTGTCAGCAAAGG+AGG - tig0020661:75378-75397 Msa1384460:three_prime_UTR 50.0%
!! GAAGAGGTGGTGGAAGAGTA+AGG + tig0020661:75534-75553 None:intergenic 50.0%
! GGCTGATTCAGGTGGATCTT+CGG - tig0020661:75646-75665 Msa1384460:three_prime_UTR 50.0%
! GCTGATTCAGGTGGATCTTC+GGG - tig0020661:75647-75666 Msa1384460:three_prime_UTR 50.0%
CTGATTCAGGTGGATCTTCG+GGG - tig0020661:75648-75667 Msa1384460:three_prime_UTR 50.0%
CAGCTGAAACCGTTCTGGTA+TGG + tig0020661:75687-75706 None:intergenic 50.0%
AGAACGGTTTCAGCTGCATG+CGG - tig0020661:75691-75710 Msa1384460:three_prime_UTR 50.0%
CCCTGCATATCCAAACTGCA+GGG + tig0020661:75726-75745 None:intergenic 50.0%
CCCTGCAGTTTGGATATGCA+GGG - tig0020661:75723-75742 Msa1384460:CDS 50.0%
ACCCTGCATATCCAAACTGC+AGG + tig0020661:75727-75746 None:intergenic 50.0%
! TCTTTTGTCTTGCCCTCGTC+GGG - tig0020661:76037-76056 Msa1384460:intron 50.0%
ACACAGGATTACAGCCAACC+AGG - tig0020661:76404-76423 Msa1384460:intron 50.0%
CACAGGATTACAGCCAACCA+GGG - tig0020661:76405-76424 Msa1384460:intron 50.0%
AGCCAAGCAAGTAGAAACCC+TGG + tig0020661:76425-76444 None:intergenic 50.0%
GGGTTTCTACTTGCTTGGCT+TGG - tig0020661:76425-76444 Msa1384460:intron 50.0%
GTGCGGTTGAACAGAAAGGA+TGG - tig0020661:76624-76643 Msa1384460:CDS 50.0%
GATGGAATAGGAAAGGTGGC+AGG - tig0020661:76642-76661 Msa1384460:CDS 50.0%
! CTGCTGTTTAGAGGTGGAAC+TGG + tig0020661:76732-76751 None:intergenic 50.0%
CTGGGATTGGGAGATGCAAA+AGG - tig0020661:76795-76814 Msa1384460:intron 50.0%
TTTGTCATGGTCTGGTTGGC+TGG - tig0020661:76860-76879 Msa1384460:intron 50.0%
GCCGGATACTTCTTAAGGAC+AGG + tig0020661:76897-76916 None:intergenic 50.0%
! GAGCTAAGGCACTATTGGGT+TGG - tig0020661:78802-78821 Msa1384460:intron 50.0%
! TCCGTTGATGAAGGGAGAAG+AGG + tig0020661:79365-79384 None:intergenic 50.0%
CTTGTCAGCAAAGGAGGGTG+TGG - tig0020661:75384-75403 Msa1384460:three_prime_UTR 55.0%
GAAGTGGTGTGAAGAGGTGG+TGG + tig0020661:75544-75563 None:intergenic 55.0%
GAGGAAGTGGTGTGAAGAGG+TGG + tig0020661:75547-75566 None:intergenic 55.0%
GGAGAGGAAGTGGTGTGAAG+AGG + tig0020661:75550-75569 None:intergenic 55.0%
GCATGCAGCTGAAACCGTTC+TGG + tig0020661:75692-75711 None:intergenic 55.0%
TCCAAACTGCAGGGCCAACA+TGG + tig0020661:75717-75736 None:intergenic 55.0%
GCCCTGCAGTTTGGATATGC+AGG - tig0020661:75722-75741 Msa1384460:CDS 55.0%
GTGCAGCTCTTGAGACGACA+TGG + tig0020661:75751-75770 None:intergenic 55.0%
GGCGAGCCGGATACTTCTTA+AGG + tig0020661:76902-76921 None:intergenic 55.0%
TTGCAGGGAGTAGTGGCATC+AGG - tig0020661:78355-78374 Msa1384460:CDS 55.0%
! AGGAGGCCCAGTTTTCGTTG+CGG - tig0020661:78414-78433 Msa1384460:CDS 55.0%
GGCAGCAATCACTTCCACTC+CGG - tig0020661:79283-79302 Msa1384460:CDS 55.0%
TCAGCTGCATGCGGCCATGT+TGG - tig0020661:75700-75719 Msa1384460:exon 60.0%
GCCATGTTGGCCCTGCAGTT+TGG - tig0020661:75713-75732 Msa1384460:exon 60.0%
GAAGTGACAGAGAGGCGAGC+CGG + tig0020661:76915-76934 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0020661 gene 75256 79854 75256 ID=Msa1384460;Name=Msa1384460
tig0020661 mRNA 75256 79854 75256 ID=Msa1384460-mRNA-1;Parent=Msa1384460;Name=Msa1384460-mRNA-1;_AED=0.07;_eAED=0.07;_QI=388|1|1|1|1|1|6|460|393
tig0020661 exon 75256 75911 75256 ID=Msa1384460-mRNA-1:exon:9099;Parent=Msa1384460-mRNA-1
tig0020661 exon 76598 76749 76598 ID=Msa1384460-mRNA-1:exon:9098;Parent=Msa1384460-mRNA-1
tig0020661 exon 78061 78496 78061 ID=Msa1384460-mRNA-1:exon:9097;Parent=Msa1384460-mRNA-1
tig0020661 exon 78584 78700 78584 ID=Msa1384460-mRNA-1:exon:9096;Parent=Msa1384460-mRNA-1
tig0020661 exon 79052 79114 79052 ID=Msa1384460-mRNA-1:exon:9095;Parent=Msa1384460-mRNA-1
tig0020661 exon 79249 79854 79249 ID=Msa1384460-mRNA-1:exon:9094;Parent=Msa1384460-mRNA-1
tig0020661 five_prime_UTR 79467 79854 79467 ID=Msa1384460-mRNA-1:five_prime_utr;Parent=Msa1384460-mRNA-1
tig0020661 CDS 79249 79466 79249 ID=Msa1384460-mRNA-1:cds;Parent=Msa1384460-mRNA-1
tig0020661 CDS 79052 79114 79052 ID=Msa1384460-mRNA-1:cds;Parent=Msa1384460-mRNA-1
tig0020661 CDS 78584 78700 78584 ID=Msa1384460-mRNA-1:cds;Parent=Msa1384460-mRNA-1
tig0020661 CDS 78061 78496 78061 ID=Msa1384460-mRNA-1:cds;Parent=Msa1384460-mRNA-1
tig0020661 CDS 76598 76749 76598 ID=Msa1384460-mRNA-1:cds;Parent=Msa1384460-mRNA-1
tig0020661 CDS 75716 75911 75716 ID=Msa1384460-mRNA-1:cds;Parent=Msa1384460-mRNA-1
tig0020661 three_prime_UTR 75256 75715 75256 ID=Msa1384460-mRNA-1:three_prime_utr;Parent=Msa1384460-mRNA-1
Gene Sequence

>Msa1384460

ATGGCTGATTCAGGTGGATCTTCGGGGAGAATGTGTTGCTCCATACCAGAACGGTTTCAGCTGCATGCGGCCATGTTGGCCCTGCAGTTTGGATATGCAGGGTTCCATGTCGTCTCAAGAGCTGCACTTAACATGGGTGTTAGCAAACTTGTTTTCCCAGTTTACCGCAATATTATTGCCTTTCTTCTCCTCCTTCCTTTTGCCTACTTCTTAGAAAAGAAGGAGAGGCCAGCTATTACTTTCAACTTTCTCTTGCAGTTCTTTTGTCTTGCCCTCGTCGGGATTACAGCCAACCAGGGTTTCTACTTGCTTGGCTTGGACAACACATCTCCAACCTTTGCATCAGCTATACAGAATTCTGTACCAGCCATTACATTTCTCATGGCAGTCTTACTCAGAATAGAAAAGGTGCGGTTGAACAGAAAGGATGGAATAGGAAAGGTGGCAGGAACATTGTTTTGTGTTGCAGGAGCATCAGTGATTACACTATACAAAGGTCCAACAATATACAGTCCAGTTCCACCTCTAAACAGCAGCATTAATGGTGGCAGTGAGTCAATCTCAATCTCAATCTCATCACTGGGATTGGGAGATGCAAAAGGAAAAAACTGGACCCTTGGATGTTTGTACCTTATAGGACATTGTTTGTCATGGTCTGGTTGGCTGGTGTTGCAAGCACCTGTCCTTAAGAAGTATCCGGCTCGCCTCTCTGTCACTTCCTATACATGTTTCTTTGGACTTATCCAATTTCTCATTATTGCTTTGATCCTTGAAAGAGATGCTCAGGCTTGGATTTTTCAATCTGGTGGAGAAGTTTTTACTATTTTGTACGCGGGAGTAGTGGCATCAGGAATTGCATTCGCTGTACAGATATGGTGCATTGATAGAGGAGGCCCAGTTTTCGTTGCGGTGTATCAACCTGTTCAAACTCTTGTTGTGGCTATTATGGCTTCCCTTGCTTTAGGAGAAGAGTTCTATTTGGGAGGGATCATTGGAGCAGTGTTGATCATTGTGGGGTTATACCTAGTGTTGTGGGGTAAAAACGAAGAAAAGAAATTTGCAAGGGAGCTGGCAGCAATCACTTCCACTCCGGAGCATAGTAACATAATCAGGTCCTCAAGCCATCATGCCAAAACATCACTTTCTCAACCTCTTCTCCCTTCATCAACGGAAAATGTTTGA
Protein sequence

>Msa1384460

MADSGGSSGRMCCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIAFLLLLPFAYFLEKKERPAITFNFLLQFFCLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVLLRIEKVRLNRKDGIGKVAGTLFCVAGASVITLYKGPTIYSPVPPLNSSINGGSESISISISSLGLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLIQFLIIALILERDAQAWIFQSGGEVFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASLALGEEFYLGGIIGAVLIIVGLYLVLWGKNEEKKFARELAAITSTPEHSNIIRSSSHHAKTSLSQPLLPSSTENV*