Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1316630 | sp|Q9ZPY9|P4KG4_ARATH | 58.487 | 595 | 206 | 9 | 1 | 588 | 1 | 561 | 0.0 | 685 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1316630 | G8A2Y5 | 96.644 | 596 | 20 | 0 | 1 | 596 | 1 | 596 | 0.0 | 1200 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012710 | Msa1316630 | 0.803906 | 2.786802e-49 | -8.615850e-47 |
| Msa0017320 | Msa1316630 | 0.801056 | 1.077760e-48 | -8.615850e-47 |
| Msa0061500 | Msa1316630 | 0.807323 | 5.345904e-50 | -8.615850e-47 |
| Msa0090970 | Msa1316630 | 0.822938 | 1.812355e-53 | -8.615850e-47 |
| Msa0102140 | Msa1316630 | 0.817268 | 3.601497e-52 | -8.615850e-47 |
| Msa0111080 | Msa1316630 | 0.802965 | 4.368347e-49 | -8.615850e-47 |
| Msa0117520 | Msa1316630 | 0.808078 | 3.695922e-50 | -8.615850e-47 |
| Msa0119440 | Msa1316630 | 0.801717 | 7.891251e-49 | -8.615850e-47 |
| Msa0705990 | Msa1316630 | 0.808908 | 2.457752e-50 | -8.615850e-47 |
| Msa0743530 | Msa1316630 | 0.802023 | 6.827924e-49 | -8.615850e-47 |
| Msa0764920 | Msa1316630 | 0.801546 | 8.556126e-49 | -8.615850e-47 |
| Msa0789560 | Msa1316630 | 0.805468 | 1.315610e-49 | -8.615850e-47 |
| Msa0794210 | Msa1316630 | 0.814330 | 1.627806e-51 | -8.615850e-47 |
| Msa0809140 | Msa1316630 | 0.812724 | 3.670825e-51 | -8.615850e-47 |
| Msa0812950 | Msa1316630 | 0.833173 | 6.210239e-56 | -8.615850e-47 |
| Msa0136630 | Msa1316630 | 0.807585 | 4.704545e-50 | -8.615850e-47 |
| Msa0142500 | Msa1316630 | 0.813752 | 2.183612e-51 | -8.615850e-47 |
| Msa0152560 | Msa1316630 | 0.845388 | 4.189549e-59 | -8.615850e-47 |
| Msa0160960 | Msa1316630 | 0.811564 | 6.574341e-51 | -8.615850e-47 |
| Msa0187830 | Msa1316630 | 0.839949 | 1.166341e-57 | -8.615850e-47 |
| Msa0207030 | Msa1316630 | 0.813468 | 2.520833e-51 | -8.615850e-47 |
| Msa1225600 | Msa1316630 | 0.820696 | 5.983943e-53 | -8.615850e-47 |
| Msa1250110 | Msa1316630 | 0.813153 | 2.955970e-51 | -8.615850e-47 |
| Msa1250730 | Msa1316630 | 0.808925 | 2.437622e-50 | -8.615850e-47 |
| Msa1280170 | Msa1316630 | 0.806896 | 6.582407e-50 | -8.615850e-47 |
| Msa1316630 | Msa1338400 | 0.806618 | 7.537275e-50 | -8.615850e-47 |
| Msa1316630 | Msa1400930 | 0.832606 | 8.590550e-56 | -8.615850e-47 |
| Msa1316630 | Msa1416260 | 0.803765 | 2.981516e-49 | -8.615850e-47 |
| Msa1316630 | Msa1424630 | 0.814357 | 1.605224e-51 | -8.615850e-47 |
| Msa1316630 | Msa1428780 | 0.805169 | 1.519687e-49 | -8.615850e-47 |
| Msa1316630 | Msa1442790 | 0.811332 | 7.381595e-51 | -8.615850e-47 |
| Msa0380600 | Msa1316630 | 0.803653 | 3.145831e-49 | -8.615850e-47 |
| Msa0388730 | Msa1316630 | 0.809442 | 1.888760e-50 | -8.615850e-47 |
| Msa0403490 | Msa1316630 | 0.834254 | 3.333027e-56 | -8.615850e-47 |
| Msa0430240 | Msa1316630 | 0.805828 | 1.105479e-49 | -8.615850e-47 |
| Msa1007290 | Msa1316630 | 0.802068 | 6.686920e-49 | -8.615850e-47 |
| Msa1042660 | Msa1316630 | 0.807206 | 5.660314e-50 | -8.615850e-47 |
| Msa1072900 | Msa1316630 | 0.814429 | 1.547621e-51 | -8.615850e-47 |
| Msa0240270 | Msa1316630 | 0.830913 | 2.246440e-55 | -8.615850e-47 |
| Msa0284450 | Msa1316630 | 0.822167 | 2.737705e-53 | -8.615850e-47 |
| Msa0299660 | Msa1316630 | 0.802238 | 6.169487e-49 | -8.615850e-47 |
| Msa1184780 | Msa1316630 | 0.809672 | 1.685515e-50 | -8.615850e-47 |
| Msa1207350 | Msa1316630 | 0.817607 | 3.020909e-52 | -8.615850e-47 |
| Msa1209190 | Msa1316630 | 0.814476 | 1.511328e-51 | -8.615850e-47 |
| Msa1209860 | Msa1316630 | 0.829478 | 5.032682e-55 | -8.615850e-47 |
| Msa0518170 | Msa1316630 | 0.809632 | 1.719239e-50 | -8.615850e-47 |
| Msa0525610 | Msa1316630 | 0.801198 | 1.008423e-48 | -8.615850e-47 |
| Msa0566350 | Msa1316630 | 0.807297 | 5.415356e-50 | -8.615850e-47 |
| Msa0566750 | Msa1316630 | 0.822046 | 2.920231e-53 | -8.615850e-47 |
| Msa0594200 | Msa1316630 | 0.803989 | 2.679504e-49 | -8.615850e-47 |
| Msa0842770 | Msa1316630 | 0.807011 | 6.225416e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1316630 | MtrunA17_Chr8g0346901 | 96.644 | 596 | 20 | 0 | 1 | 596 | 1 | 596 | 0.0 | 1200 |
| Msa1316630 | MtrunA17_Chr7g0275661 | 71.380 | 594 | 162 | 5 | 1 | 590 | 1 | 590 | 0.0 | 839 |
| Msa1316630 | MtrunA17_Chr8g0388301 | 58.070 | 570 | 223 | 8 | 36 | 591 | 25 | 592 | 0.0 | 657 |
| Msa1316630 | MtrunA17_Chr3g0126781 | 58.246 | 570 | 214 | 6 | 30 | 588 | 19 | 575 | 0.0 | 655 |
| Msa1316630 | MtrunA17_Chr5g0396531 | 55.444 | 597 | 236 | 10 | 1 | 587 | 1 | 577 | 0.0 | 646 |
| Msa1316630 | MtrunA17_Chr8g0366091 | 40.411 | 292 | 144 | 7 | 270 | 547 | 150 | 425 | 2.81e-62 | 217 |
| Msa1316630 | MtrunA17_Chr7g0255481 | 38.816 | 304 | 158 | 7 | 258 | 547 | 76 | 365 | 7.39e-59 | 203 |
| Msa1316630 | MtrunA17_Chr5g0420771 | 39.731 | 297 | 141 | 8 | 269 | 547 | 155 | 431 | 2.93e-58 | 206 |
| Msa1316630 | MtrunA17_Chr7g0220391 | 39.236 | 288 | 142 | 7 | 277 | 547 | 155 | 426 | 1.62e-55 | 198 |
| Msa1316630 | MtrunA17_Chr1g0181441 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 7.26e-17 | 80.5 |
| Msa1316630 | MtrunA17_Chr1g0181441 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 2.56e-16 | 78.6 |
| Msa1316630 | MtrunA17_Chr7g0274921 | 32.544 | 169 | 102 | 6 | 26 | 189 | 67 | 228 | 7.48e-17 | 80.1 |
| Msa1316630 | MtrunA17_Chr7g0274921 | 34.615 | 156 | 90 | 6 | 38 | 189 | 5 | 152 | 2.52e-16 | 78.6 |
| Msa1316630 | MtrunA17_Chr4g0041751 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.82e-16 | 79.0 |
| Msa1316630 | MtrunA17_Chr4g0041751 | 34.266 | 143 | 89 | 4 | 26 | 166 | 65 | 204 | 1.94e-11 | 64.3 |
| Msa1316630 | MtrunA17_Chr6g0475961 | 34.615 | 156 | 90 | 6 | 38 | 189 | 6 | 153 | 3.36e-16 | 77.4 |
| Msa1316630 | MtrunA17_Chr6g0475961 | 35.537 | 121 | 75 | 3 | 28 | 146 | 70 | 189 | 2.84e-12 | 66.2 |
| Msa1316630 | MtrunA17_Chr8g0377821 | 33.526 | 173 | 93 | 7 | 21 | 189 | 4 | 158 | 4.94e-16 | 80.5 |
| Msa1316630 | MtrunA17_Chr8g0377821 | 32.544 | 169 | 102 | 6 | 26 | 189 | 73 | 234 | 5.36e-16 | 80.1 |
| Msa1316630 | MtrunA17_Chr8g0377821 | 32.544 | 169 | 102 | 6 | 26 | 189 | 149 | 310 | 5.36e-16 | 80.1 |
| Msa1316630 | MtrunA17_Chr8g0377821 | 32.544 | 169 | 102 | 6 | 26 | 189 | 225 | 386 | 5.36e-16 | 80.1 |
| Msa1316630 | MtrunA17_Chr4g0046801 | 32.544 | 169 | 102 | 6 | 26 | 189 | 68 | 229 | 8.57e-16 | 80.1 |
| Msa1316630 | MtrunA17_Chr4g0046801 | 32.544 | 169 | 102 | 6 | 26 | 189 | 144 | 305 | 8.57e-16 | 80.1 |
| Msa1316630 | MtrunA17_Chr4g0046801 | 32.544 | 169 | 102 | 6 | 26 | 189 | 220 | 381 | 8.57e-16 | 80.1 |
| Msa1316630 | MtrunA17_Chr4g0046801 | 32.544 | 169 | 102 | 6 | 26 | 189 | 296 | 457 | 8.57e-16 | 80.1 |
| Msa1316630 | MtrunA17_Chr4g0046801 | 34.615 | 156 | 90 | 6 | 38 | 189 | 6 | 153 | 2.67e-15 | 78.6 |
| Msa1316630 | MtrunA17_Chr4g0041641 | 32.544 | 169 | 102 | 6 | 26 | 189 | 69 | 230 | 8.69e-16 | 80.1 |
| Msa1316630 | MtrunA17_Chr4g0041641 | 32.544 | 169 | 102 | 6 | 26 | 189 | 145 | 306 | 8.69e-16 | 80.1 |
| Msa1316630 | MtrunA17_Chr4g0041641 | 32.544 | 169 | 102 | 6 | 26 | 189 | 221 | 382 | 8.69e-16 | 80.1 |
| Msa1316630 | MtrunA17_Chr4g0041641 | 32.544 | 169 | 102 | 6 | 26 | 189 | 297 | 458 | 8.69e-16 | 80.1 |
| Msa1316630 | MtrunA17_Chr4g0041641 | 34.615 | 156 | 90 | 6 | 38 | 189 | 7 | 154 | 2.59e-15 | 78.6 |
| Msa1316630 | MtrunA17_Chr4g0048591 | 32.544 | 169 | 102 | 6 | 26 | 189 | 220 | 381 | 9.45e-16 | 80.5 |
| Msa1316630 | MtrunA17_Chr4g0048591 | 32.544 | 169 | 102 | 6 | 26 | 189 | 68 | 229 | 1.16e-15 | 80.1 |
| Msa1316630 | MtrunA17_Chr4g0048591 | 32.544 | 169 | 102 | 6 | 26 | 189 | 144 | 305 | 1.16e-15 | 80.1 |
| Msa1316630 | MtrunA17_Chr4g0048591 | 32.544 | 169 | 102 | 6 | 26 | 189 | 372 | 533 | 1.16e-15 | 80.1 |
| Msa1316630 | MtrunA17_Chr4g0048591 | 34.615 | 156 | 90 | 6 | 38 | 189 | 6 | 153 | 3.44e-15 | 78.6 |
| Msa1316630 | MtrunA17_Chr4g0048591 | 31.953 | 169 | 103 | 6 | 26 | 189 | 296 | 457 | 1.09e-14 | 77.0 |
| Msa1316630 | MtrunA17_Chr8g0342711 | 32.544 | 169 | 102 | 6 | 26 | 189 | 68 | 229 | 1.14e-15 | 80.1 |
| Msa1316630 | MtrunA17_Chr8g0342711 | 32.544 | 169 | 102 | 6 | 26 | 189 | 144 | 305 | 1.14e-15 | 80.1 |
| Msa1316630 | MtrunA17_Chr8g0342711 | 32.544 | 169 | 102 | 6 | 26 | 189 | 220 | 381 | 1.14e-15 | 80.1 |
| Msa1316630 | MtrunA17_Chr8g0342711 | 32.544 | 169 | 102 | 6 | 26 | 189 | 296 | 457 | 1.14e-15 | 80.1 |
| Msa1316630 | MtrunA17_Chr8g0342711 | 32.544 | 169 | 102 | 6 | 26 | 189 | 372 | 533 | 1.14e-15 | 80.1 |
| Msa1316630 | MtrunA17_Chr8g0342711 | 34.615 | 156 | 90 | 6 | 38 | 189 | 6 | 153 | 3.44e-15 | 78.6 |
| Msa1316630 | MtrunA17_Chr4g0041701 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 1.20e-15 | 80.1 |
| Msa1316630 | MtrunA17_Chr4g0041701 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 1.20e-15 | 80.1 |
| Msa1316630 | MtrunA17_Chr4g0041701 | 32.544 | 169 | 102 | 6 | 26 | 189 | 217 | 378 | 1.20e-15 | 80.1 |
| Msa1316630 | MtrunA17_Chr4g0041701 | 32.544 | 169 | 102 | 6 | 26 | 189 | 293 | 454 | 1.20e-15 | 80.1 |
| Msa1316630 | MtrunA17_Chr4g0041701 | 32.544 | 169 | 102 | 6 | 26 | 189 | 369 | 530 | 1.20e-15 | 80.1 |
| Msa1316630 | MtrunA17_Chr4g0041701 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 3.66e-15 | 78.6 |
| Msa1316630 | MtrunA17_Chr4g0046831 | 32.544 | 169 | 102 | 6 | 26 | 189 | 68 | 229 | 1.38e-15 | 80.1 |
| Msa1316630 | MtrunA17_Chr4g0046831 | 32.544 | 169 | 102 | 6 | 26 | 189 | 144 | 305 | 1.38e-15 | 80.1 |
| Msa1316630 | MtrunA17_Chr4g0046831 | 32.544 | 169 | 102 | 6 | 26 | 189 | 356 | 517 | 1.38e-15 | 80.1 |
| Msa1316630 | MtrunA17_Chr4g0046831 | 32.544 | 169 | 102 | 6 | 26 | 189 | 432 | 593 | 1.38e-15 | 80.1 |
| Msa1316630 | MtrunA17_Chr4g0046831 | 34.615 | 156 | 90 | 6 | 38 | 189 | 6 | 153 | 4.27e-15 | 78.6 |
| Msa1316630 | MtrunA17_Chr4g0037241 | 34.437 | 151 | 87 | 6 | 38 | 184 | 3 | 145 | 1.51e-14 | 71.6 |
| Msa1316630 | MtrunA17_Chr5g0444101 | 34.437 | 151 | 87 | 6 | 38 | 184 | 3 | 145 | 1.51e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1316630 | AT2G46500.1 | 58.487 | 595 | 206 | 9 | 1 | 588 | 1 | 561 | 0.0 | 685 |
| Msa1316630 | AT2G46500.2 | 58.487 | 595 | 206 | 9 | 1 | 588 | 1 | 561 | 0.0 | 685 |
| Msa1316630 | AT5G24240.1 | 56.714 | 566 | 211 | 9 | 33 | 588 | 28 | 569 | 0.0 | 627 |
| Msa1316630 | AT5G24240.2 | 56.714 | 566 | 211 | 9 | 33 | 588 | 28 | 569 | 0.0 | 627 |
| Msa1316630 | AT2G46500.3 | 54.118 | 425 | 155 | 8 | 1 | 418 | 1 | 392 | 7.29e-145 | 426 |
| Msa1316630 | AT2G03890.1 | 39.871 | 311 | 154 | 8 | 254 | 547 | 139 | 433 | 3.67e-61 | 214 |
| Msa1316630 | AT1G13640.1 | 40.741 | 297 | 139 | 7 | 272 | 547 | 149 | 429 | 1.12e-60 | 213 |
| Msa1316630 | AT1G13640.2 | 40.741 | 297 | 139 | 7 | 272 | 547 | 149 | 429 | 1.12e-60 | 213 |
| Msa1316630 | AT1G26270.1 | 38.333 | 300 | 152 | 7 | 265 | 547 | 146 | 429 | 9.34e-57 | 202 |
| Msa1316630 | AT2G40850.1 | 38.636 | 308 | 161 | 6 | 280 | 572 | 120 | 414 | 9.05e-56 | 198 |
| Msa1316630 | AT3G56600.2 | 38.796 | 299 | 153 | 7 | 280 | 562 | 100 | 384 | 1.38e-54 | 194 |
| Msa1316630 | AT3G56600.1 | 38.796 | 299 | 153 | 7 | 280 | 562 | 103 | 387 | 1.39e-54 | 194 |
| Msa1316630 | AT3G56600.3 | 38.796 | 299 | 153 | 7 | 280 | 562 | 103 | 387 | 1.39e-54 | 194 |
| Msa1316630 | AT2G03890.2 | 42.174 | 230 | 102 | 6 | 334 | 547 | 99 | 313 | 5.29e-48 | 176 |
| Msa1316630 | AT1G27570.1 | 32.227 | 211 | 125 | 5 | 344 | 543 | 396 | 599 | 3.52e-25 | 110 |
| Msa1316630 | AT1G27570.2 | 32.227 | 211 | 125 | 5 | 344 | 543 | 387 | 590 | 3.81e-25 | 110 |
| Msa1316630 | AT4G02890.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 1.08e-16 | 80.1 |
| Msa1316630 | AT4G02890.2 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 3.51e-16 | 78.6 |
| Msa1316630 | AT4G02890.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 1.08e-16 | 80.1 |
| Msa1316630 | AT4G02890.1 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 3.51e-16 | 78.6 |
| Msa1316630 | AT4G05050.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 1.08e-16 | 80.1 |
| Msa1316630 | AT4G05050.2 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 3.51e-16 | 78.6 |
| Msa1316630 | AT4G05050.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 1.08e-16 | 80.1 |
| Msa1316630 | AT4G05050.1 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 3.51e-16 | 78.6 |
| Msa1316630 | AT4G05050.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 1.08e-16 | 80.1 |
| Msa1316630 | AT4G05050.3 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 3.51e-16 | 78.6 |
| Msa1316630 | AT4G05320.7 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.13e-16 | 77.8 |
| Msa1316630 | AT4G05050.4 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.13e-16 | 77.8 |
| Msa1316630 | AT4G05320.5 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 3.42e-16 | 80.1 |
| Msa1316630 | AT4G05320.5 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 3.42e-16 | 80.1 |
| Msa1316630 | AT4G05320.5 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.11e-15 | 78.6 |
| Msa1316630 | AT4G05320.8 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 3.42e-16 | 80.1 |
| Msa1316630 | AT4G05320.8 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 3.42e-16 | 80.1 |
| Msa1316630 | AT4G05320.8 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.11e-15 | 78.6 |
| Msa1316630 | AT4G02890.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 3.42e-16 | 80.1 |
| Msa1316630 | AT4G02890.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 3.42e-16 | 80.1 |
| Msa1316630 | AT4G02890.3 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.11e-15 | 78.6 |
| Msa1316630 | AT4G02890.4 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 3.42e-16 | 80.1 |
| Msa1316630 | AT4G02890.4 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 3.42e-16 | 80.1 |
| Msa1316630 | AT4G02890.4 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.11e-15 | 78.6 |
| Msa1316630 | AT5G03240.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 3.43e-16 | 80.1 |
| Msa1316630 | AT5G03240.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 3.43e-16 | 80.1 |
| Msa1316630 | AT5G03240.3 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.09e-15 | 78.6 |
| Msa1316630 | AT5G03240.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 3.43e-16 | 80.1 |
| Msa1316630 | AT5G03240.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 3.43e-16 | 80.1 |
| Msa1316630 | AT5G03240.2 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.09e-15 | 78.6 |
| Msa1316630 | AT5G03240.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 3.43e-16 | 80.1 |
| Msa1316630 | AT5G03240.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 3.43e-16 | 80.1 |
| Msa1316630 | AT5G03240.1 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.09e-15 | 78.6 |
| Msa1316630 | AT5G20620.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 3.43e-16 | 80.1 |
| Msa1316630 | AT5G20620.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 3.43e-16 | 80.1 |
| Msa1316630 | AT5G20620.2 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.09e-15 | 78.6 |
| Msa1316630 | AT1G65350.1 | 34.641 | 153 | 93 | 5 | 38 | 189 | 3 | 149 | 5.42e-16 | 79.7 |
| Msa1316630 | AT1G65350.1 | 31.361 | 169 | 103 | 6 | 26 | 189 | 65 | 225 | 2.74e-14 | 74.7 |
| Msa1316630 | AT1G65350.1 | 33.099 | 142 | 90 | 4 | 26 | 165 | 140 | 278 | 1.40e-12 | 69.3 |
| Msa1316630 | AT4G05320.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 7.68e-16 | 80.1 |
| Msa1316630 | AT4G05320.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 7.68e-16 | 80.1 |
| Msa1316630 | AT4G05320.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 217 | 378 | 7.68e-16 | 80.1 |
| Msa1316630 | AT4G05320.1 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 2.40e-15 | 78.6 |
| Msa1316630 | AT4G05320.6 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 7.68e-16 | 80.1 |
| Msa1316630 | AT4G05320.6 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 7.68e-16 | 80.1 |
| Msa1316630 | AT4G05320.6 | 32.544 | 169 | 102 | 6 | 26 | 189 | 217 | 378 | 7.68e-16 | 80.1 |
| Msa1316630 | AT4G05320.6 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 2.40e-15 | 78.6 |
| Msa1316630 | AT4G05320.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 7.68e-16 | 80.1 |
| Msa1316630 | AT4G05320.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 7.68e-16 | 80.1 |
| Msa1316630 | AT4G05320.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 217 | 378 | 7.68e-16 | 80.1 |
| Msa1316630 | AT4G05320.3 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 2.40e-15 | 78.6 |
| Msa1316630 | AT5G20620.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 8.17e-16 | 80.1 |
| Msa1316630 | AT5G20620.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 8.17e-16 | 80.1 |
| Msa1316630 | AT5G20620.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 217 | 378 | 8.17e-16 | 80.1 |
| Msa1316630 | AT5G20620.1 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 2.56e-15 | 78.6 |
| Msa1316630 | AT4G05320.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 1.24e-15 | 80.1 |
| Msa1316630 | AT4G05320.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 1.24e-15 | 80.1 |
| Msa1316630 | AT4G05320.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 217 | 378 | 1.24e-15 | 80.1 |
| Msa1316630 | AT4G05320.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 293 | 454 | 1.24e-15 | 80.1 |
| Msa1316630 | AT4G05320.2 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 3.77e-15 | 78.6 |
| Msa1316630 | AT4G05320.4 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 1.24e-15 | 80.1 |
| Msa1316630 | AT4G05320.4 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 1.24e-15 | 80.1 |
| Msa1316630 | AT4G05320.4 | 32.544 | 169 | 102 | 6 | 26 | 189 | 217 | 378 | 1.24e-15 | 80.1 |
| Msa1316630 | AT4G05320.4 | 32.544 | 169 | 102 | 6 | 26 | 189 | 293 | 454 | 1.24e-15 | 80.1 |
| Msa1316630 | AT4G05320.4 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 3.77e-15 | 78.6 |
| Msa1316630 | AT1G55060.1 | 33.333 | 156 | 92 | 6 | 38 | 189 | 79 | 226 | 4.57e-15 | 75.5 |
| Msa1316630 | AT1G55060.1 | 32.450 | 151 | 91 | 5 | 43 | 189 | 7 | 150 | 2.56e-14 | 73.2 |
| Msa1316630 | AT1G31340.1 | 35.099 | 151 | 86 | 6 | 38 | 184 | 3 | 145 | 7.25e-15 | 72.8 |
| Msa1316630 | AT2G35635.1 | 34.459 | 148 | 91 | 5 | 38 | 184 | 3 | 145 | 7.99e-15 | 72.8 |
| Msa1316630 | AT5G37640.1 | 35.461 | 141 | 80 | 5 | 53 | 189 | 19 | 152 | 1.71e-14 | 75.5 |
| Msa1316630 | AT5G37640.1 | 33.333 | 165 | 98 | 6 | 28 | 187 | 69 | 226 | 2.44e-14 | 74.7 |
| Msa1316630 | AT5G37640.1 | 31.361 | 169 | 105 | 6 | 26 | 189 | 143 | 305 | 2.89e-13 | 71.6 |
| Msa1316630 | AT3G09790.2 | 34.532 | 139 | 80 | 5 | 53 | 187 | 19 | 150 | 5.20e-12 | 69.3 |
| Msa1316630 | AT3G09790.2 | 32.692 | 156 | 92 | 6 | 26 | 171 | 67 | 219 | 2.92e-11 | 67.0 |
| Msa1316630 | AT3G09790.1 | 34.532 | 139 | 80 | 5 | 53 | 187 | 19 | 150 | 5.20e-12 | 69.3 |
| Msa1316630 | AT3G09790.1 | 32.692 | 156 | 92 | 6 | 26 | 171 | 67 | 219 | 2.92e-11 | 67.0 |
Find 191 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGATTAGGTTTGGTCTTC+TGG | 0.077920 | 8_4:-17544616 | Msa1316630:five_prime_UTR |
| TTTACACCAATCACAAAATT+AGG | 0.088539 | 8_4:-17544745 | Msa1316630:five_prime_UTR |
| AATTAAAGCTTAACTATATC+TGG | 0.127212 | 8_4:+17544573 | None:intergenic |
| CGGGAAGGAGTATACCTTTC+AGG | 0.160755 | 8_4:-17544054 | Msa1316630:CDS |
| GGAAGTTGCTGCTTATATTT+TGG | 0.175078 | 8_4:-17543379 | Msa1316630:CDS |
| ATTATAACATTGGCAGAATT+AGG | 0.200063 | 8_4:-17544513 | Msa1316630:five_prime_UTR |
| GTACCTTTGAATGGCTTTAT+TGG | 0.207540 | 8_4:-17542382 | Msa1316630:CDS |
| TTTCGTTTATCTTTCGTATT+CGG | 0.222595 | 8_4:-17544303 | Msa1316630:CDS |
| AGTGGCCGCCGATCATTATT+TGG | 0.232723 | 8_4:-17543345 | Msa1316630:CDS |
| CACTGATTTGTACAGTTATA+TGG | 0.235060 | 8_4:-17544543 | Msa1316630:five_prime_UTR |
| TTCGTTTATCTTTCGTATTC+GGG | 0.235527 | 8_4:-17544302 | Msa1316630:CDS |
| TCTGAAGCTAGTTCAACTTT+AGG | 0.241682 | 8_4:+17543642 | None:intergenic |
| TAATGGAAGTTGTGAGGATA+TGG | 0.244475 | 8_4:-17543202 | Msa1316630:CDS |
| AAGGGGAAAGGGTTTGTTAT+TGG | 0.248743 | 8_4:+17544857 | None:intergenic |
| GATGCAGAGGAAGGTGATTA+TGG | 0.260708 | 8_4:-17543777 | Msa1316630:CDS |
| GAGTTGGCCAAGGAGCTTTC+AGG | 0.267673 | 8_4:-17543401 | Msa1316630:CDS |
| TTGTACAGTTATATGGCTTT+AGG | 0.270873 | 8_4:-17544536 | Msa1316630:five_prime_UTR |
| CTGAAGCTAGTTCAACTTTA+GGG | 0.274765 | 8_4:+17543643 | None:intergenic |
| AATTCTTTGCTCAAGGATTA+TGG | 0.280190 | 8_4:-17544152 | Msa1316630:CDS |
| AATATGAGAAATTAAGCTTC+TGG | 0.281949 | 8_4:-17544709 | Msa1316630:five_prime_UTR |
| TCCTGGTAGAGGTCTTATTT+TGG | 0.283272 | 8_4:-17543682 | Msa1316630:CDS |
| TTGAATTCTGCTATAGGATT+TGG | 0.285711 | 8_4:-17541997 | Msa1316630:three_prime_UTR |
| GGATGCTGTCTCTGAGATTA+TGG | 0.293621 | 8_4:-17542066 | Msa1316630:CDS |
| TTGATTAGGTTTGGTCTTCT+GGG | 0.300503 | 8_4:-17544615 | Msa1316630:five_prime_UTR |
| CACACAACCTCCTGCTGTTC+AGG | 0.306369 | 8_4:+17543963 | None:intergenic |
| TTTAAGAAAATATCACAAAA+AGG | 0.307931 | 8_4:+17544647 | None:intergenic |
| TGAACTAGCTTCAGAGGTTT+GGG | 0.315716 | 8_4:-17543634 | Msa1316630:CDS |
| TTGAACTAGCTTCAGAGGTT+TGG | 0.321874 | 8_4:-17543635 | Msa1316630:CDS |
| ATTGCCCTTCTGAAGTTTCA+TGG | 0.323760 | 8_4:-17542290 | Msa1316630:CDS |
| GCATTTGATTCTGTTCTTCC+TGG | 0.324254 | 8_4:-17542110 | Msa1316630:CDS |
| TACTTTATGCTCGACTCAAC+AGG | 0.327135 | 8_4:-17543534 | Msa1316630:CDS |
| AACAATTTCTCCCTTGAAAC+AGG | 0.332507 | 8_4:+17544386 | None:intergenic |
| TTACACCAATCACAAAATTA+GGG | 0.337991 | 8_4:-17544744 | Msa1316630:five_prime_UTR |
| GAGGGTTTGGCTGCTAAGTT+TGG | 0.346981 | 8_4:-17543249 | Msa1316630:CDS |
| TCATTAAGAATTATAATTGC+TGG | 0.348757 | 8_4:+17542022 | None:intergenic |
| ATGAAGTTGAATTCTGCTAT+AGG | 0.360435 | 8_4:-17542003 | Msa1316630:three_prime_UTR |
| AGCAGGAGGTTGTGTGTAAC+GGG | 0.363517 | 8_4:-17543956 | Msa1316630:CDS |
| ATTTAACCATCCAGAGGGTT+TGG | 0.373470 | 8_4:-17543262 | Msa1316630:CDS |
| TTATAACATTGGCAGAATTA+GGG | 0.374037 | 8_4:-17544512 | Msa1316630:five_prime_UTR |
| TGGTGTTCCTCCGACTGTTA+TGG | 0.392395 | 8_4:-17543304 | Msa1316630:CDS |
| TTAATTCAGAGGTAAATATA+AGG | 0.393713 | 8_4:+17541834 | None:intergenic |
| TTGAAAGGTGTAAGGATGTT+TGG | 0.396056 | 8_4:-17544031 | Msa1316630:CDS |
| GAGTTGTTTGTTGTTGTTGT+TGG | 0.400253 | 8_4:+17544815 | None:intergenic |
| ATGATAAACACTACATATGA+TGG | 0.407373 | 8_4:-17543609 | Msa1316630:CDS |
| CAAATGTTCGTGGAGAATAA+TGG | 0.408480 | 8_4:-17543219 | Msa1316630:CDS |
| ACTTTAGGGTTAACAACAAC+CGG | 0.411541 | 8_4:+17543657 | None:intergenic |
| TTGAAGATTGTACCTTTGAA+TGG | 0.413144 | 8_4:-17542391 | Msa1316630:CDS |
| CTGAAAGGTATACTCCTTCC+CGG | 0.413982 | 8_4:+17544055 | None:intergenic |
| TCAATGATCTCTGGAGAGTA+TGG | 0.416964 | 8_4:+17542344 | None:intergenic |
| CACAAAATTAGGGTTTATAG+AGG | 0.417605 | 8_4:-17544734 | Msa1316630:five_prime_UTR |
| CTCAAAATTCAAAGGAATGA+AGG | 0.419509 | 8_4:-17544227 | Msa1316630:CDS |
| TAAGAAACAGATTGCGGAAA+AGG | 0.427549 | 8_4:-17544003 | Msa1316630:CDS |
| CCTTCTGAAGTTTCATGGAT+GGG | 0.429432 | 8_4:-17542285 | Msa1316630:CDS |
| TCAGTGTGAGAACTTGTTCC+GGG | 0.431902 | 8_4:-17544073 | Msa1316630:CDS |
| GGCCATGAGAAAGGATTTGC+TGG | 0.432160 | 8_4:-17543324 | Msa1316630:CDS |
| TCAGAAGCATGGTCGAGATT+CGG | 0.435796 | 8_4:+17542234 | None:intergenic |
| AGTTGGCCAAGGAGCTTTCA+GGG | 0.436183 | 8_4:-17543400 | Msa1316630:CDS |
| TCATTATTTGGCCATGAGAA+AGG | 0.439250 | 8_4:-17543333 | Msa1316630:CDS |
| ATATGAGAAATTAAGCTTCT+GGG | 0.440663 | 8_4:-17544708 | Msa1316630:five_prime_UTR |
| CCACTCTGAGTCCTGTTTCA+AGG | 0.444085 | 8_4:-17544397 | Msa1316630:CDS |
| AGGCAGTATCCATGATCAAT+TGG | 0.445883 | 8_4:+17543048 | None:intergenic |
| ATCAGGCTTCCAATGGCAAA+AGG | 0.446075 | 8_4:+17542185 | None:intergenic |
| TTTATGTAGTCAATGATCTC+TGG | 0.446436 | 8_4:+17542335 | None:intergenic |
| GTACCCTCTGCAGATCTGAT+TGG | 0.447790 | 8_4:+17543567 | None:intergenic |
| CTTTCAGGTTGAAAGGTGTA+AGG | 0.447803 | 8_4:-17544039 | Msa1316630:CDS |
| ATCAGTGTGAGAACTTGTTC+CGG | 0.450830 | 8_4:-17544074 | Msa1316630:CDS |
| AAACAGAAGTTGGTTTGTAA+TGG | 0.457340 | 8_4:-17544194 | Msa1316630:CDS |
| TCCGATGCGTGTGCTACCTT+CGG | 0.458516 | 8_4:-17544270 | Msa1316630:CDS |
| TGTTGTTGGAATTCAAGATT+CGG | 0.463060 | 8_4:+17544829 | None:intergenic |
| CCCTTCTGAAGTTTCATGGA+TGG | 0.463805 | 8_4:-17542286 | Msa1316630:CDS |
| ATGCAGAGGAAGGTGATTAT+GGG | 0.474524 | 8_4:-17543776 | Msa1316630:CDS |
| TCAATGACTCTCGGCACATC+AGG | 0.474569 | 8_4:+17542168 | None:intergenic |
| AATTCAAGATTCGGAAAAGA+AGG | 0.480058 | 8_4:+17544838 | None:intergenic |
| AACTTAGCAGCCAAACCCTC+TGG | 0.480352 | 8_4:+17543252 | None:intergenic |
| CAATATCTTCTTCAGCATCA+AGG | 0.481634 | 8_4:+17542309 | None:intergenic |
| TAGCAAAGAAGATGCGAGAA+AGG | 0.482978 | 8_4:-17543742 | Msa1316630:CDS |
| GAGAAGAGAAGAATGAATTG+TGG | 0.483865 | 8_4:+17544922 | None:intergenic |
| GGATTACAAAATCCATTGGT+TGG | 0.485669 | 8_4:+17544359 | None:intergenic |
| CACTCTGAGTCCTGTTTCAA+GGG | 0.486062 | 8_4:-17544396 | Msa1316630:CDS |
| GCAAATGCAGATAGGCATGC+TGG | 0.489456 | 8_4:-17543120 | Msa1316630:CDS |
| CAACTTCCCTGAAAGCTCCT+TGG | 0.490176 | 8_4:+17543394 | None:intergenic |
| TCAAAATTCAAAGGAATGAA+GGG | 0.498227 | 8_4:-17544226 | Msa1316630:CDS |
| TCAGGCTTCCAATGGCAAAA+GGG | 0.499240 | 8_4:+17542186 | None:intergenic |
| TTAGGTTTGGTCTTCTGGGT+TGG | 0.500181 | 8_4:-17544611 | Msa1316630:five_prime_UTR |
| TGGCTTTAGGATTATAACAT+TGG | 0.500234 | 8_4:-17544523 | Msa1316630:five_prime_UTR |
| GAATGAATTGTGGAACAAGA+TGG | 0.509380 | 8_4:+17544932 | None:intergenic |
| ACATATGATGGGCTAGATAG+TGG | 0.509383 | 8_4:-17543597 | Msa1316630:CDS |
| TGGTTCCTTGCAAATGTTCG+TGG | 0.511177 | 8_4:-17543229 | Msa1316630:CDS |
| AAATATGCGGATGTTAGTAC+AGG | 0.514113 | 8_4:-17543852 | Msa1316630:CDS |
| CAGCAGGAGGTTGTGTGTAA+CGG | 0.517620 | 8_4:-17543957 | Msa1316630:CDS |
| TCGAGAAATGCTCCTGGTAG+AGG | 0.521176 | 8_4:-17543693 | Msa1316630:CDS |
| AGTGCATAAAATTACTGTGC+TGG | 0.522419 | 8_4:-17543154 | Msa1316630:CDS |
| ATTAAAGCTTAACTATATCT+GGG | 0.522718 | 8_4:+17544574 | None:intergenic |
| TGAGACTTGCAAATGCAGAT+AGG | 0.524034 | 8_4:-17543128 | Msa1316630:CDS |
| GCGTAGCAATTCTTTGCTCA+AGG | 0.525188 | 8_4:-17544159 | Msa1316630:CDS |
| ACAAGGAGTCTGTGATTGAA+GGG | 0.526200 | 8_4:-17542145 | Msa1316630:CDS |
| GGTGACAAACAAACAGAAGT+TGG | 0.531086 | 8_4:-17544204 | Msa1316630:CDS |
| AACAAGGAGTCTGTGATTGA+AGG | 0.533373 | 8_4:-17542146 | Msa1316630:CDS |
| AACGACAAAGGTAAACCTCT+AGG | 0.535148 | 8_4:+17543453 | None:intergenic |
| GTTTGCTGATCCTGAACAGC+AGG | 0.535234 | 8_4:-17543973 | Msa1316630:CDS |
| ATCAGATCTGCAGAGGGTAC+AGG | 0.535943 | 8_4:-17543564 | Msa1316630:CDS |
| TGATCTCTGGAGAGTATGGC+TGG | 0.536526 | 8_4:+17542348 | None:intergenic |
| AGTATACCTTTCAGGTTGAA+AGG | 0.537419 | 8_4:-17544046 | Msa1316630:CDS |
| TAAAGTTGAACTAGCTTCAG+AGG | 0.543230 | 8_4:-17543640 | Msa1316630:CDS |
| AATGGAAGTTGTGAGGATAT+GGG | 0.547910 | 8_4:-17543201 | Msa1316630:CDS |
| TGGTGATCACATCAAGGTGC+TGG | 0.552467 | 8_4:+17542042 | None:intergenic |
| TACATAACTATAGCCAATGA+TGG | 0.552840 | 8_4:-17541942 | Msa1316630:three_prime_UTR |
| TCTCGACATAATCCGTTCGA+TGG | 0.553249 | 8_4:+17543710 | None:intergenic |
| GGTCGAGATTCGGAGAGTGC+GGG | 0.554690 | 8_4:+17542244 | None:intergenic |
| AAATGAAGTGCTTACACTAG+TGG | 0.555410 | 8_4:+17543023 | None:intergenic |
| CTTACACCTTTCAACCTGAA+AGG | 0.556700 | 8_4:+17544040 | None:intergenic |
| AATGAAGTGCTTACACTAGT+GGG | 0.557248 | 8_4:+17543024 | None:intergenic |
| CGGTGAAGCTCAAAATTCAA+AGG | 0.558968 | 8_4:-17544235 | Msa1316630:CDS |
| GAGTATGGCTGGCGAGCTTG+AGG | 0.559426 | 8_4:+17542359 | None:intergenic |
| AATGAATTGTGGAACAAGAT+GGG | 0.559844 | 8_4:+17544933 | None:intergenic |
| AATTGCTACGCGACAACTCA+CGG | 0.559922 | 8_4:+17544171 | None:intergenic |
| AAGGATTATGGAGTTACAGA+AGG | 0.561199 | 8_4:-17544140 | Msa1316630:CDS |
| AATATCTTCTTCAGCATCAA+GGG | 0.561373 | 8_4:+17542310 | None:intergenic |
| AAATTGTTGTCTCCAACCAA+TGG | 0.562278 | 8_4:-17544371 | Msa1316630:CDS |
| TCCTTCACCGGAAAAGCACC+AGG | 0.562505 | 8_4:+17543177 | None:intergenic |
| CAAATGCAGATAGGCATGCT+GGG | 0.565622 | 8_4:-17543119 | Msa1316630:CDS |
| GCCTATGGATGAAGAGCCGA+TGG | 0.567919 | 8_4:-17543487 | Msa1316630:CDS |
| GATTCGGAAAAGAAGGGGAA+AGG | 0.568192 | 8_4:+17544845 | None:intergenic |
| ATTCAAGATTCGGAAAAGAA+GGG | 0.572787 | 8_4:+17544839 | None:intergenic |
| ACGACAAAGGTAAACCTCTA+GGG | 0.574374 | 8_4:+17543454 | None:intergenic |
| GGTTTACCTTTGTCGTTAGA+CGG | 0.574812 | 8_4:-17543447 | Msa1316630:CDS |
| ATTCTCCACGAACATTTGCA+AGG | 0.577079 | 8_4:+17543224 | None:intergenic |
| ATTCGGAAAAGAAGGGGAAA+GGG | 0.577319 | 8_4:+17544846 | None:intergenic |
| CTAGGGTTATTCACAGCCAT+CGG | 0.577439 | 8_4:+17543471 | None:intergenic |
| TGATAAACACTACATATGAT+GGG | 0.578850 | 8_4:-17543608 | Msa1316630:CDS |
| TCGGCACATCAGGCTTCCAA+TGG | 0.583411 | 8_4:+17542178 | None:intergenic |
| AAGAATTCTGATGCAGAGGA+AGG | 0.583886 | 8_4:-17543786 | Msa1316630:CDS |
| CAGTGGATTACAAAATCCAT+TGG | 0.583900 | 8_4:+17544355 | None:intergenic |
| TGTTCTTCCTGGTACTAGTG+AGG | 0.584732 | 8_4:-17542099 | Msa1316630:CDS |
| CAGGCTTCCAATGGCAAAAG+GGG | 0.586520 | 8_4:+17542187 | None:intergenic |
| GAAAGAATGTGTTAAGACCA+AGG | 0.588376 | 8_4:+17541867 | None:intergenic |
| CACCAGCAAATCCTTTCTCA+TGG | 0.593275 | 8_4:+17543322 | None:intergenic |
| AGAGTGCGGGCGCATTCGAG+TGG | 0.593444 | 8_4:+17542257 | None:intergenic |
| CCCATCCATGAAACTTCAGA+AGG | 0.594790 | 8_4:+17542285 | None:intergenic |
| ATCTGCAGAGGGTACAGGTG+GGG | 0.594998 | 8_4:-17543559 | Msa1316630:CDS |
| TTCAAGATTCGGAAAAGAAG+GGG | 0.595412 | 8_4:+17544840 | None:intergenic |
| AACAAGATGGGAGCGCGTAG+TGG | 0.596008 | 8_4:+17544945 | None:intergenic |
| TTTGCATTTGGTGATTCGAC+TGG | 0.596576 | 8_4:-17544111 | Msa1316630:CDS |
| TCGTTTATCTTTCGTATTCG+GGG | 0.598318 | 8_4:-17544301 | Msa1316630:CDS |
| AGATCTGCAGAGGGTACAGG+TGG | 0.599302 | 8_4:-17543561 | Msa1316630:CDS |
| AAAGTAGCCTCACTAGTACC+AGG | 0.600234 | 8_4:+17542092 | None:intergenic |
| CAGAGGAAGGTGATTATGGG+AGG | 0.601611 | 8_4:-17543773 | Msa1316630:CDS |
| ACTCCTTGTTCAATGACTCT+CGG | 0.601726 | 8_4:+17542159 | None:intergenic |
| AAAGAATGTGTTAAGACCAA+GGG | 0.602876 | 8_4:+17541868 | None:intergenic |
| AATTGCTGGTGATCACATCA+AGG | 0.603979 | 8_4:+17542036 | None:intergenic |
| CAATTGGAATCAAAACAGCC+TGG | 0.604227 | 8_4:+17543064 | None:intergenic |
| TCCGAAGGTAGCACACGCAT+CGG | 0.605294 | 8_4:+17544269 | None:intergenic |
| ACCGACTCAATTGTATCCGA+AGG | 0.605708 | 8_4:+17544254 | None:intergenic |
| TGCTGATCCTGAACAGCAGG+AGG | 0.606146 | 8_4:-17543970 | Msa1316630:CDS |
| TACGAAGAATTCTGATGCAG+AGG | 0.606169 | 8_4:-17543790 | Msa1316630:CDS |
| TTCTCCAATCAGATCTGCAG+AGG | 0.606887 | 8_4:-17543571 | Msa1316630:CDS |
| TCTCATGGCCAAATAATGAT+CGG | 0.609397 | 8_4:+17543337 | None:intergenic |
| TGGTCGAGATTCGGAGAGTG+CGG | 0.613622 | 8_4:+17542243 | None:intergenic |
| GCCATCGGCTCTTCATCCAT+AGG | 0.614196 | 8_4:+17543486 | None:intergenic |
| TCCAAAATAAGACCTCTACC+AGG | 0.616093 | 8_4:+17543681 | None:intergenic |
| AGGCCAATAAAGCCATTCAA+AGG | 0.616797 | 8_4:+17542379 | None:intergenic |
| GGAACAAGTTCTCACACTGA+TGG | 0.618065 | 8_4:+17544076 | None:intergenic |
| CCTTTGTCGTTAGACGGCGA+GGG | 0.621719 | 8_4:-17543441 | Msa1316630:CDS |
| TGTGAGAACTTGTTCCGGGA+AGG | 0.622079 | 8_4:-17544069 | Msa1316630:CDS |
| AGGAGTATGAAGCCATCGAA+CGG | 0.625133 | 8_4:-17543722 | Msa1316630:CDS |
| AAAGCATTTAACCATCCAGA+GGG | 0.626201 | 8_4:-17543267 | Msa1316630:CDS |
| ACTTTATGCTCGACTCAACA+GGG | 0.629476 | 8_4:-17543533 | Msa1316630:CDS |
| TAGCAGCCAAACCCTCTGGA+TGG | 0.631866 | 8_4:+17543256 | None:intergenic |
| GTAATGGGTAATGACTCCCT+TGG | 0.634850 | 8_4:-17541884 | Msa1316630:three_prime_UTR |
| GTATGTTAAGAAACAGATTG+CGG | 0.640425 | 8_4:-17544009 | Msa1316630:CDS |
| CAAAATTCAAAGGAATGAAG+GGG | 0.640906 | 8_4:-17544225 | Msa1316630:CDS |
| AAGGGTACAAGAGTTGGCCA+AGG | 0.641585 | 8_4:-17543411 | Msa1316630:CDS |
| AAGCACTTTGCCATAACAGT+CGG | 0.642352 | 8_4:+17543294 | None:intergenic |
| AGGATTATGGAGTTACAGAA+GGG | 0.642917 | 8_4:-17544139 | Msa1316630:CDS |
| GTGCCGAGAGTCATTGAACA+AGG | 0.644592 | 8_4:-17542162 | Msa1316630:CDS |
| ACCTTCGGATACAATTGAGT+CGG | 0.646170 | 8_4:-17544255 | Msa1316630:CDS |
| GGAGAATAATGGAAGTTGTG+AGG | 0.648120 | 8_4:-17543208 | Msa1316630:CDS |
| TCTCCAATCAGATCTGCAGA+GGG | 0.648500 | 8_4:-17543570 | Msa1316630:CDS |
| ATTATGTCGAGAAATGCTCC+TGG | 0.652932 | 8_4:-17543699 | Msa1316630:CDS |
| AAGTGCTTACACTAGTGGGA+AGG | 0.656001 | 8_4:+17543028 | None:intergenic |
| GATCTGCAGAGGGTACAGGT+GGG | 0.656279 | 8_4:-17543560 | Msa1316630:CDS |
| AGTTGTGAGGATATGGGACC+TGG | 0.656793 | 8_4:-17543195 | Msa1316630:CDS |
| CACTTTGCCATAACAGTCGG+AGG | 0.659075 | 8_4:+17543297 | None:intergenic |
| CCATCCATGAAACTTCAGAA+GGG | 0.666106 | 8_4:+17542286 | None:intergenic |
| CAAAGCATTTAACCATCCAG+AGG | 0.671281 | 8_4:-17543268 | Msa1316630:CDS |
| AGATTCGAAGACAAGTGCAG+TGG | 0.674817 | 8_4:+17544338 | None:intergenic |
| CCTTGAAACAGGACTCAGAG+TGG | 0.679484 | 8_4:+17544397 | None:intergenic |
| CATGGCCAAATAATGATCGG+CGG | 0.694496 | 8_4:+17543340 | None:intergenic |
| AATATGCGGATGTTAGTACA+GGG | 0.697062 | 8_4:-17543851 | Msa1316630:CDS |
| GCAGGAGGTTGTGTGTAACG+GGG | 0.717392 | 8_4:-17543955 | Msa1316630:CDS |
| ATGGCTGTGAATAACCCTAG+AGG | 0.736670 | 8_4:-17543468 | Msa1316630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAAATTTGATTTTGATT+AGG | - | chr8_4:17542215-17542234 | Msa1316630:CDS | 10.0% |
| !!! | AAAGTTAAACATTATTTTAT+TGG | - | chr8_4:17544277-17544296 | Msa1316630:CDS | 10.0% |
| !! | TTTAAGAAAATATCACAAAA+AGG | + | chr8_4:17542200-17542219 | None:intergenic | 15.0% |
| !! | AATAAAAGTTGTAATATTTG+AGG | - | chr8_4:17544013-17544032 | Msa1316630:CDS | 15.0% |
| !!! | AACAATCTTTTTGATTGAAA+AGG | + | chr8_4:17542177-17542196 | None:intergenic | 20.0% |
| !!! | AATTTGATTTTGATTAGGTT+TGG | - | chr8_4:17542220-17542239 | Msa1316630:CDS | 20.0% |
| !! | ATTAAAGCTTAACTATATCT+GGG | + | chr8_4:17542273-17542292 | None:intergenic | 20.0% |
| !! | AATTAAAGCTTAACTATATC+TGG | + | chr8_4:17542274-17542293 | None:intergenic | 20.0% |
| !! | AATTCAATGAAAAATGCTAA+AGG | + | chr8_4:17542380-17542399 | None:intergenic | 20.0% |
| !!! | TTTTGTTAGAACAAAATATG+CGG | - | chr8_4:17542979-17542998 | Msa1316630:intron | 20.0% |
| !!! | GTTAAACATTATTTTATTGG+TGG | - | chr8_4:17544280-17544299 | Msa1316630:CDS | 20.0% |
| !! | TCATTAAGAATTATAATTGC+TGG | + | chr8_4:17544825-17544844 | None:intergenic | 20.0% |
| !!! | TTTAATTGTTTTCACAGTAA+TGG | - | chr8_4:17544944-17544963 | Msa1316630:five_prime_UTR | 20.0% |
| !!! | TTAATTGTTTTCACAGTAAT+GGG | - | chr8_4:17544945-17544964 | Msa1316630:five_prime_UTR | 20.0% |
| ! | TTTACACCAATCACAAAATT+AGG | - | chr8_4:17542099-17542118 | Msa1316630:CDS | 25.0% |
| ! | TTACACCAATCACAAAATTA+GGG | - | chr8_4:17542100-17542119 | Msa1316630:CDS | 25.0% |
| !! | ATAAACCCTAATTTTGTGAT+TGG | + | chr8_4:17542108-17542127 | None:intergenic | 25.0% |
| ! | AATATGAGAAATTAAGCTTC+TGG | - | chr8_4:17542135-17542154 | Msa1316630:CDS | 25.0% |
| ! | ATATGAGAAATTAAGCTTCT+GGG | - | chr8_4:17542136-17542155 | Msa1316630:CDS | 25.0% |
| ! | ATTATAACATTGGCAGAATT+AGG | - | chr8_4:17542331-17542350 | Msa1316630:CDS | 25.0% |
| ! | TTATAACATTGGCAGAATTA+GGG | - | chr8_4:17542332-17542351 | Msa1316630:CDS | 25.0% |
| ! | TTTCGTTTATCTTTCGTATT+CGG | - | chr8_4:17542541-17542560 | Msa1316630:intron | 25.0% |
| ! | TCAAAATTCAAAGGAATGAA+GGG | - | chr8_4:17542618-17542637 | Msa1316630:intron | 25.0% |
| ! | ATGATAAACACTACATATGA+TGG | - | chr8_4:17543235-17543254 | Msa1316630:CDS | 25.0% |
| ! | TGATAAACACTACATATGAT+GGG | - | chr8_4:17543236-17543255 | Msa1316630:CDS | 25.0% |
| ! | TAAGTAGTTATAACCAAACA+AGG | + | chr8_4:17543917-17543936 | None:intergenic | 25.0% |
| ! | ATAACTACTTAATCAGTTGT+AGG | - | chr8_4:17543926-17543945 | Msa1316630:CDS | 25.0% |
| ! | AATCTGAAAAACATTCCAAA+AGG | + | chr8_4:17544042-17544061 | None:intergenic | 25.0% |
| ! | TAACACCAGAATTAATGATT+TGG | - | chr8_4:17544187-17544206 | Msa1316630:CDS | 25.0% |
| ! | TCTATCCAAATCATTAATTC+TGG | + | chr8_4:17544195-17544214 | None:intergenic | 25.0% |
| ! | AAGAAAAAAAAGACCATCAT+TGG | + | chr8_4:17544918-17544937 | None:intergenic | 25.0% |
| AATGAATTGTGGAACAAGAT+GGG | + | chr8_4:17541914-17541933 | None:intergenic | 30.0% | |
| ! | TGAAATTTCTCTCTCGTTTT+TGG | - | chr8_4:17541951-17541970 | Msa1316630:three_prime_UTR | 30.0% |
| ATTCAAGATTCGGAAAAGAA+GGG | + | chr8_4:17542008-17542027 | None:intergenic | 30.0% | |
| AATTCAAGATTCGGAAAAGA+AGG | + | chr8_4:17542009-17542028 | None:intergenic | 30.0% | |
| TGTTGTTGGAATTCAAGATT+CGG | + | chr8_4:17542018-17542037 | None:intergenic | 30.0% | |
| CACAAAATTAGGGTTTATAG+AGG | - | chr8_4:17542110-17542129 | Msa1316630:CDS | 30.0% | |
| !! | CACTGATTTGTACAGTTATA+TGG | - | chr8_4:17542301-17542320 | Msa1316630:CDS | 30.0% |
| TTGTACAGTTATATGGCTTT+AGG | - | chr8_4:17542308-17542327 | Msa1316630:CDS | 30.0% | |
| !! | TGGCTTTAGGATTATAACAT+TGG | - | chr8_4:17542321-17542340 | Msa1316630:CDS | 30.0% |
| TTCGTTTATCTTTCGTATTC+GGG | - | chr8_4:17542542-17542561 | Msa1316630:intron | 30.0% | |
| CTCAAAATTCAAAGGAATGA+AGG | - | chr8_4:17542617-17542636 | Msa1316630:intron | 30.0% | |
| CAAAATTCAAAGGAATGAAG+GGG | - | chr8_4:17542619-17542638 | Msa1316630:intron | 30.0% | |
| !! | AAACAGAAGTTGGTTTGTAA+TGG | - | chr8_4:17542650-17542669 | Msa1316630:intron | 30.0% |
| AATTCTTTGCTCAAGGATTA+TGG | - | chr8_4:17542692-17542711 | Msa1316630:intron | 30.0% | |
| GTATGTTAAGAAACAGATTG+CGG | - | chr8_4:17542835-17542854 | Msa1316630:intron | 30.0% | |
| AACAGGGCAAAAATATGTAT+CGG | - | chr8_4:17543327-17543346 | Msa1316630:CDS | 30.0% | |
| ! | TTAAAAAAGGGTACAAGAGT+TGG | - | chr8_4:17543427-17543446 | Msa1316630:CDS | 30.0% |
| !!! | GTTTTGATTCCAATTGATCA+TGG | - | chr8_4:17543787-17543806 | Msa1316630:CDS | 30.0% |
| !!! | AACTTTTGTTTTGCCTTGTT+TGG | - | chr8_4:17543901-17543920 | Msa1316630:CDS | 30.0% |
| ! | CTCTTCTTTAACAATGCTTT+TGG | - | chr8_4:17543961-17543980 | Msa1316630:CDS | 30.0% |
| TATGAGTGTGTAATGTAATC+TGG | - | chr8_4:17544069-17544088 | Msa1316630:CDS | 30.0% | |
| !! | AATGTAATCTGGAGTGTTTT+TGG | - | chr8_4:17544080-17544099 | Msa1316630:CDS | 30.0% |
| ATGAAGGTAATATCATGCTA+GGG | + | chr8_4:17544116-17544135 | None:intergenic | 30.0% | |
| !! | ACTGCATGTATTTTGAGTAA+TGG | - | chr8_4:17544236-17544255 | Msa1316630:CDS | 30.0% |
| GAGTAATGGCAATTGTAATT+AGG | - | chr8_4:17544250-17544269 | Msa1316630:CDS | 30.0% | |
| GGCATTATTTACCTATTTGA+AGG | - | chr8_4:17544301-17544320 | Msa1316630:CDS | 30.0% | |
| GAATGCAAAATCCTTCAAAT+AGG | + | chr8_4:17544315-17544334 | None:intergenic | 30.0% | |
| !!! | TCTTTTTTCTCTTGATGTTC+AGG | - | chr8_4:17544333-17544352 | Msa1316630:CDS | 30.0% |
| !!! | CTTTTTTCTCTTGATGTTCA+GGG | - | chr8_4:17544334-17544353 | Msa1316630:CDS | 30.0% |
| !!! | TTTTTTCTCTTGATGTTCAG+GGG | - | chr8_4:17544335-17544354 | Msa1316630:CDS | 30.0% |
| CAAAAAAAACCTTGAGTGAT+TGG | + | chr8_4:17544420-17544439 | None:intergenic | 30.0% | |
| TTGAAGATTGTACCTTTGAA+TGG | - | chr8_4:17544453-17544472 | Msa1316630:five_prime_UTR | 30.0% | |
| TTTATGTAGTCAATGATCTC+TGG | + | chr8_4:17544512-17544531 | None:intergenic | 30.0% | |
| AATATCTTCTTCAGCATCAA+GGG | + | chr8_4:17544537-17544556 | None:intergenic | 30.0% | |
| ATGAAGTTGAATTCTGCTAT+AGG | - | chr8_4:17544841-17544860 | Msa1316630:five_prime_UTR | 30.0% | |
| TTGAATTCTGCTATAGGATT+TGG | - | chr8_4:17544847-17544866 | Msa1316630:five_prime_UTR | 30.0% | |
| TACATAACTATAGCCAATGA+TGG | - | chr8_4:17544902-17544921 | Msa1316630:five_prime_UTR | 30.0% | |
| AAAGAATGTGTTAAGACCAA+GGG | + | chr8_4:17544979-17544998 | None:intergenic | 30.0% | |
| GAATGAATTGTGGAACAAGA+TGG | + | chr8_4:17541915-17541934 | None:intergenic | 35.0% | |
| GAGAAGAGAAGAATGAATTG+TGG | + | chr8_4:17541925-17541944 | None:intergenic | 35.0% | |
| TTCAAGATTCGGAAAAGAAG+GGG | + | chr8_4:17542007-17542026 | None:intergenic | 35.0% | |
| !! | GAGTTGTTTGTTGTTGTTGT+TGG | + | chr8_4:17542032-17542051 | None:intergenic | 35.0% |
| CTTCTTCTTCTTCTTCTTCT+CGG | - | chr8_4:17542051-17542070 | Msa1316630:CDS | 35.0% | |
| ! | TTTGATTAGGTTTGGTCTTC+TGG | - | chr8_4:17542228-17542247 | Msa1316630:CDS | 35.0% |
| ! | TTGATTAGGTTTGGTCTTCT+GGG | - | chr8_4:17542229-17542248 | Msa1316630:CDS | 35.0% |
| !!! | TTGGCAGAATTAGGGTTTTT+TGG | - | chr8_4:17542340-17542359 | Msa1316630:CDS | 35.0% |
| AGTTGAAAAATGTCTTCTGC+TGG | - | chr8_4:17542419-17542438 | Msa1316630:intron | 35.0% | |
| AACAATTTCTCCCTTGAAAC+AGG | + | chr8_4:17542461-17542480 | None:intergenic | 35.0% | |
| AAATTGTTGTCTCCAACCAA+TGG | - | chr8_4:17542473-17542492 | Msa1316630:intron | 35.0% | |
| GGATTACAAAATCCATTGGT+TGG | + | chr8_4:17542488-17542507 | None:intergenic | 35.0% | |
| !! | CAGTGGATTACAAAATCCAT+TGG | + | chr8_4:17542492-17542511 | None:intergenic | 35.0% |
| TCGTTTATCTTTCGTATTCG+GGG | - | chr8_4:17542543-17542562 | Msa1316630:intron | 35.0% | |
| AAGGATTATGGAGTTACAGA+AGG | - | chr8_4:17542704-17542723 | Msa1316630:intron | 35.0% | |
| AGGATTATGGAGTTACAGAA+GGG | - | chr8_4:17542705-17542724 | Msa1316630:intron | 35.0% | |
| ! | AGAAGGGAATGTTTTGCATT+TGG | - | chr8_4:17542721-17542740 | Msa1316630:intron | 35.0% |
| !! | AGTATACCTTTCAGGTTGAA+AGG | - | chr8_4:17542798-17542817 | Msa1316630:intron | 35.0% |
| ! | TTGAAAGGTGTAAGGATGTT+TGG | - | chr8_4:17542813-17542832 | Msa1316630:intron | 35.0% |
| TAAGAAACAGATTGCGGAAA+AGG | - | chr8_4:17542841-17542860 | Msa1316630:intron | 35.0% | |
| AAATATGCGGATGTTAGTAC+AGG | - | chr8_4:17542992-17543011 | Msa1316630:intron | 35.0% | |
| AATATGCGGATGTTAGTACA+GGG | - | chr8_4:17542993-17543012 | Msa1316630:intron | 35.0% | |
| !! | ACTTTAGGGTTAACAACAAC+CGG | + | chr8_4:17543190-17543209 | None:intergenic | 35.0% |
| CTGAAGCTAGTTCAACTTTA+GGG | + | chr8_4:17543204-17543223 | None:intergenic | 35.0% | |
| ! | TCTGAAGCTAGTTCAACTTT+AGG | + | chr8_4:17543205-17543224 | None:intergenic | 35.0% |
| ! | TAAAGTTGAACTAGCTTCAG+AGG | - | chr8_4:17543204-17543223 | Msa1316630:CDS | 35.0% |
| !! | GGAAGTTGCTGCTTATATTT+TGG | - | chr8_4:17543465-17543484 | Msa1316630:CDS | 35.0% |
| ! | ATTTTGGATCATCCAATGAG+TGG | - | chr8_4:17543481-17543500 | Msa1316630:CDS | 35.0% |
| TCTCATGGCCAAATAATGAT+CGG | + | chr8_4:17543510-17543529 | None:intergenic | 35.0% | |
| TCATTATTTGGCCATGAGAA+AGG | - | chr8_4:17543511-17543530 | Msa1316630:CDS | 35.0% | |
| ! | AAAGCATTTAACCATCCAGA+GGG | - | chr8_4:17543577-17543596 | Msa1316630:CDS | 35.0% |
| CAAATGTTCGTGGAGAATAA+TGG | - | chr8_4:17543625-17543644 | Msa1316630:CDS | 35.0% | |
| TAATGGAAGTTGTGAGGATA+TGG | - | chr8_4:17543642-17543661 | Msa1316630:CDS | 35.0% | |
| AATGGAAGTTGTGAGGATAT+GGG | - | chr8_4:17543643-17543662 | Msa1316630:CDS | 35.0% | |
| ! | ATTTTATGCACTTCCTTCAC+CGG | + | chr8_4:17543682-17543701 | None:intergenic | 35.0% |
| AGTGCATAAAATTACTGTGC+TGG | - | chr8_4:17543690-17543709 | Msa1316630:CDS | 35.0% | |
| CTTGGCAAAGAGAAGAAAAA+TGG | - | chr8_4:17543757-17543776 | Msa1316630:CDS | 35.0% | |
| ! | AATGAAGTGCTTACACTAGT+GGG | + | chr8_4:17543823-17543842 | None:intergenic | 35.0% |
| ! | AAATGAAGTGCTTACACTAG+TGG | + | chr8_4:17543824-17543843 | None:intergenic | 35.0% |
| !! | TAATATTTGAGGCCTCCTTT+TGG | - | chr8_4:17544024-17544043 | Msa1316630:CDS | 35.0% |
| CTGAAAAACATTCCAAAAGG+AGG | + | chr8_4:17544039-17544058 | None:intergenic | 35.0% | |
| CATGAAGGTAATATCATGCT+AGG | + | chr8_4:17544117-17544136 | None:intergenic | 35.0% | |
| ! | GAGAAAAGTAGCATTGGAAA+AGG | + | chr8_4:17544154-17544173 | None:intergenic | 35.0% |
| AGCAAAGAGAAAAGTAGCAT+TGG | + | chr8_4:17544160-17544179 | None:intergenic | 35.0% | |
| AACTCTAAACCAATCACTCA+AGG | - | chr8_4:17544408-17544427 | Msa1316630:CDS | 35.0% | |
| !! | GTACCTTTGAATGGCTTTAT+TGG | - | chr8_4:17544462-17544481 | Msa1316630:five_prime_UTR | 35.0% |
| CAATATCTTCTTCAGCATCA+AGG | + | chr8_4:17544538-17544557 | None:intergenic | 35.0% | |
| ! | ATGCTTCTGAAAAAAGGAGT+GGG | - | chr8_4:17544623-17544642 | Msa1316630:five_prime_UTR | 35.0% |
| !!! | TACTAGTGAGGCTACTTTTA+TGG | - | chr8_4:17544757-17544776 | Msa1316630:five_prime_UTR | 35.0% |
| GAAAGAATGTGTTAAGACCA+AGG | + | chr8_4:17544980-17544999 | None:intergenic | 35.0% | |
| !! | AAGGGGAAAGGGTTTGTTAT+TGG | + | chr8_4:17541990-17542009 | None:intergenic | 40.0% |
| ATTCGGAAAAGAAGGGGAAA+GGG | + | chr8_4:17542001-17542020 | None:intergenic | 40.0% | |
| ACCTTCGGATACAATTGAGT+CGG | - | chr8_4:17542589-17542608 | Msa1316630:intron | 40.0% | |
| CGGTGAAGCTCAAAATTCAA+AGG | - | chr8_4:17542609-17542628 | Msa1316630:intron | 40.0% | |
| GGTGACAAACAAACAGAAGT+TGG | - | chr8_4:17542640-17542659 | Msa1316630:intron | 40.0% | |
| ! | TTTGCATTTGGTGATTCGAC+TGG | - | chr8_4:17542733-17542752 | Msa1316630:intron | 40.0% |
| ! | ATCAGTGTGAGAACTTGTTC+CGG | - | chr8_4:17542770-17542789 | Msa1316630:intron | 40.0% |
| CTTACACCTTTCAACCTGAA+AGG | + | chr8_4:17542807-17542826 | None:intergenic | 40.0% | |
| !! | CTTTCAGGTTGAAAGGTGTA+AGG | - | chr8_4:17542805-17542824 | Msa1316630:intron | 40.0% |
| TACGAAGAATTCTGATGCAG+AGG | - | chr8_4:17543054-17543073 | Msa1316630:CDS | 40.0% | |
| AAGAATTCTGATGCAGAGGA+AGG | - | chr8_4:17543058-17543077 | Msa1316630:CDS | 40.0% | |
| ATGCAGAGGAAGGTGATTAT+GGG | - | chr8_4:17543068-17543087 | Msa1316630:CDS | 40.0% | |
| TAGCAAAGAAGATGCGAGAA+AGG | - | chr8_4:17543102-17543121 | Msa1316630:CDS | 40.0% | |
| ATTATGTCGAGAAATGCTCC+TGG | - | chr8_4:17543145-17543164 | Msa1316630:CDS | 40.0% | |
| !!! | TCCTGGTAGAGGTCTTATTT+TGG | - | chr8_4:17543162-17543181 | Msa1316630:CDS | 40.0% |
| TCCAAAATAAGACCTCTACC+AGG | + | chr8_4:17543166-17543185 | None:intergenic | 40.0% | |
| !!! | TAGAGGTCTTATTTTGGAGC+CGG | - | chr8_4:17543168-17543187 | Msa1316630:CDS | 40.0% |
| ! | TTGAACTAGCTTCAGAGGTT+TGG | - | chr8_4:17543209-17543228 | Msa1316630:CDS | 40.0% |
| ! | TGAACTAGCTTCAGAGGTTT+GGG | - | chr8_4:17543210-17543229 | Msa1316630:CDS | 40.0% |
| !! | ACATATGATGGGCTAGATAG+TGG | - | chr8_4:17543247-17543266 | Msa1316630:CDS | 40.0% |
| TACTTTATGCTCGACTCAAC+AGG | - | chr8_4:17543310-17543329 | Msa1316630:CDS | 40.0% | |
| ACTTTATGCTCGACTCAACA+GGG | - | chr8_4:17543311-17543330 | Msa1316630:CDS | 40.0% | |
| !!! | TGTATCGGTTTTCAAGCCTA+TGG | - | chr8_4:17543342-17543361 | Msa1316630:CDS | 40.0% |
| ACGACAAAGGTAAACCTCTA+GGG | + | chr8_4:17543393-17543412 | None:intergenic | 40.0% | |
| AACGACAAAGGTAAACCTCT+AGG | + | chr8_4:17543394-17543413 | None:intergenic | 40.0% | |
| GGTTTACCTTTGTCGTTAGA+CGG | - | chr8_4:17543397-17543416 | Msa1316630:CDS | 40.0% | |
| AAGCACTTTGCCATAACAGT+CGG | + | chr8_4:17543553-17543572 | None:intergenic | 40.0% | |
| ! | CAAAGCATTTAACCATCCAG+AGG | - | chr8_4:17543576-17543595 | Msa1316630:CDS | 40.0% |
| ATTTAACCATCCAGAGGGTT+TGG | - | chr8_4:17543582-17543601 | Msa1316630:CDS | 40.0% | |
| ATTCTCCACGAACATTTGCA+AGG | + | chr8_4:17543623-17543642 | None:intergenic | 40.0% | |
| ! | GGAGAATAATGGAAGTTGTG+AGG | - | chr8_4:17543636-17543655 | Msa1316630:CDS | 40.0% |
| TGAGACTTGCAAATGCAGAT+AGG | - | chr8_4:17543716-17543735 | Msa1316630:CDS | 40.0% | |
| ! | CATGCTGGGAATATTTTGCT+TGG | - | chr8_4:17543739-17543758 | Msa1316630:CDS | 40.0% |
| CAAAGAGAAGAAAAATGGCC+AGG | - | chr8_4:17543762-17543781 | Msa1316630:CDS | 40.0% | |
| CAATTGGAATCAAAACAGCC+TGG | + | chr8_4:17543783-17543802 | None:intergenic | 40.0% | |
| AGGCAGTATCCATGATCAAT+TGG | + | chr8_4:17543799-17543818 | None:intergenic | 40.0% | |
| GAACAATAAAGCAGCATCAC+AGG | + | chr8_4:17543865-17543884 | None:intergenic | 40.0% | |
| GCAAGTCGTTGTAATCATGA+AGG | + | chr8_4:17544132-17544151 | None:intergenic | 40.0% | |
| GTCTTCAAGATTGACAGCTT+TGG | + | chr8_4:17544218-17544237 | None:intergenic | 40.0% | |
| AGGCCAATAAAGCCATTCAA+AGG | + | chr8_4:17544468-17544487 | None:intergenic | 40.0% | |
| ! | TCAATGATCTCTGGAGAGTA+TGG | + | chr8_4:17544503-17544522 | None:intergenic | 40.0% |
| !! | ATTGCCCTTCTGAAGTTTCA+TGG | - | chr8_4:17544554-17544573 | Msa1316630:five_prime_UTR | 40.0% |
| CCATCCATGAAACTTCAGAA+GGG | + | chr8_4:17544561-17544580 | None:intergenic | 40.0% | |
| !! | CCTTCTGAAGTTTCATGGAT+GGG | - | chr8_4:17544559-17544578 | Msa1316630:five_prime_UTR | 40.0% |
| ! | TCGACCATGCTTCTGAAAAA+AGG | - | chr8_4:17544617-17544636 | Msa1316630:five_prime_UTR | 40.0% |
| !!! | CACTCCTTTTTTCAGAAGCA+TGG | + | chr8_4:17544624-17544643 | None:intergenic | 40.0% |
| ! | CATGCTTCTGAAAAAAGGAG+TGG | - | chr8_4:17544622-17544641 | Msa1316630:five_prime_UTR | 40.0% |
| ! | TGCTTCTGAAAAAAGGAGTG+GGG | - | chr8_4:17544624-17544643 | Msa1316630:five_prime_UTR | 40.0% |
| TGAAAAAAGGAGTGGGGAAA+GGG | - | chr8_4:17544630-17544649 | Msa1316630:five_prime_UTR | 40.0% | |
| ACTCCTTGTTCAATGACTCT+CGG | + | chr8_4:17544688-17544707 | None:intergenic | 40.0% | |
| AACAAGGAGTCTGTGATTGA+AGG | - | chr8_4:17544698-17544717 | Msa1316630:five_prime_UTR | 40.0% | |
| ACAAGGAGTCTGTGATTGAA+GGG | - | chr8_4:17544699-17544718 | Msa1316630:five_prime_UTR | 40.0% | |
| GCATTTGATTCTGTTCTTCC+TGG | - | chr8_4:17544734-17544753 | Msa1316630:five_prime_UTR | 40.0% | |
| AATTGCTGGTGATCACATCA+AGG | + | chr8_4:17544811-17544830 | None:intergenic | 40.0% | |
| GATTCGGAAAAGAAGGGGAA+AGG | + | chr8_4:17542002-17542021 | None:intergenic | 45.0% | |
| ! | TTAGGTTTGGTCTTCTGGGT+TGG | - | chr8_4:17542233-17542252 | Msa1316630:CDS | 45.0% |
| CACTCTGAGTCCTGTTTCAA+GGG | - | chr8_4:17542448-17542467 | Msa1316630:intron | 45.0% | |
| AGATTCGAAGACAAGTGCAG+TGG | + | chr8_4:17542509-17542528 | None:intergenic | 45.0% | |
| ! | ACCGACTCAATTGTATCCGA+AGG | + | chr8_4:17542593-17542612 | None:intergenic | 45.0% |
| AATTGCTACGCGACAACTCA+CGG | + | chr8_4:17542676-17542695 | None:intergenic | 45.0% | |
| GCGTAGCAATTCTTTGCTCA+AGG | - | chr8_4:17542685-17542704 | Msa1316630:intron | 45.0% | |
| GGAACAAGTTCTCACACTGA+TGG | + | chr8_4:17542771-17542790 | None:intergenic | 45.0% | |
| ! | TCAGTGTGAGAACTTGTTCC+GGG | - | chr8_4:17542771-17542790 | Msa1316630:intron | 45.0% |
| ! | CTGAAAGGTATACTCCTTCC+CGG | + | chr8_4:17542792-17542811 | None:intergenic | 45.0% |
| GATGCAGAGGAAGGTGATTA+TGG | - | chr8_4:17543067-17543086 | Msa1316630:CDS | 45.0% | |
| ! | AGGAGTATGAAGCCATCGAA+CGG | - | chr8_4:17543122-17543141 | Msa1316630:CDS | 45.0% |
| TCTCGACATAATCCGTTCGA+TGG | + | chr8_4:17543137-17543156 | None:intergenic | 45.0% | |
| TTCTCCAATCAGATCTGCAG+AGG | - | chr8_4:17543273-17543292 | Msa1316630:CDS | 45.0% | |
| TCTCCAATCAGATCTGCAGA+GGG | - | chr8_4:17543274-17543293 | Msa1316630:CDS | 45.0% | |
| CTAGGGTTATTCACAGCCAT+CGG | + | chr8_4:17543376-17543395 | None:intergenic | 45.0% | |
| ATGGCTGTGAATAACCCTAG+AGG | - | chr8_4:17543376-17543395 | Msa1316630:CDS | 45.0% | |
| CATGGCCAAATAATGATCGG+CGG | + | chr8_4:17543507-17543526 | None:intergenic | 45.0% | |
| CACCAGCAAATCCTTTCTCA+TGG | + | chr8_4:17543525-17543544 | None:intergenic | 45.0% | |
| TGGTTCCTTGCAAATGTTCG+TGG | - | chr8_4:17543615-17543634 | Msa1316630:CDS | 45.0% | |
| CAAATGCAGATAGGCATGCT+GGG | - | chr8_4:17543725-17543744 | Msa1316630:CDS | 45.0% | |
| AAGTGCTTACACTAGTGGGA+AGG | + | chr8_4:17543819-17543838 | None:intergenic | 45.0% | |
| TTTCTCTTGATGTTCAGGGG+AGG | - | chr8_4:17544338-17544357 | Msa1316630:CDS | 45.0% | |
| !! | CCCTTCTGAAGTTTCATGGA+TGG | - | chr8_4:17544558-17544577 | Msa1316630:five_prime_UTR | 45.0% |
| CCCATCCATGAAACTTCAGA+AGG | + | chr8_4:17544562-17544581 | None:intergenic | 45.0% | |
| ! | TCAGAAGCATGGTCGAGATT+CGG | + | chr8_4:17544613-17544632 | None:intergenic | 45.0% |
| CTGAAAAAAGGAGTGGGGAA+AGG | - | chr8_4:17544629-17544648 | Msa1316630:five_prime_UTR | 45.0% | |
| TCAGGCTTCCAATGGCAAAA+GGG | + | chr8_4:17544661-17544680 | None:intergenic | 45.0% | |
| ATCAGGCTTCCAATGGCAAA+AGG | + | chr8_4:17544662-17544681 | None:intergenic | 45.0% | |
| TGTTCTTCCTGGTACTAGTG+AGG | - | chr8_4:17544745-17544764 | Msa1316630:five_prime_UTR | 45.0% | |
| AAAGTAGCCTCACTAGTACC+AGG | + | chr8_4:17544755-17544774 | None:intergenic | 45.0% | |
| !! | GGATGCTGTCTCTGAGATTA+TGG | - | chr8_4:17544778-17544797 | Msa1316630:five_prime_UTR | 45.0% |
| !! | GTAATGGGTAATGACTCCCT+TGG | - | chr8_4:17544960-17544979 | Msa1316630:five_prime_UTR | 45.0% |
| CCTTGAAACAGGACTCAGAG+TGG | + | chr8_4:17542450-17542469 | None:intergenic | 50.0% | |
| CCACTCTGAGTCCTGTTTCA+AGG | - | chr8_4:17542447-17542466 | Msa1316630:intron | 50.0% | |
| ! | TGTGAGAACTTGTTCCGGGA+AGG | - | chr8_4:17542775-17542794 | Msa1316630:intron | 50.0% |
| ! | CGGGAAGGAGTATACCTTTC+AGG | - | chr8_4:17542790-17542809 | Msa1316630:intron | 50.0% |
| ! | GTTTGCTGATCCTGAACAGC+AGG | - | chr8_4:17542871-17542890 | Msa1316630:intron | 50.0% |
| CAGCAGGAGGTTGTGTGTAA+CGG | - | chr8_4:17542887-17542906 | Msa1316630:intron | 50.0% | |
| AGCAGGAGGTTGTGTGTAAC+GGG | - | chr8_4:17542888-17542907 | Msa1316630:intron | 50.0% | |
| CAGAGGAAGGTGATTATGGG+AGG | - | chr8_4:17543071-17543090 | Msa1316630:CDS | 50.0% | |
| TCGAGAAATGCTCCTGGTAG+AGG | - | chr8_4:17543151-17543170 | Msa1316630:CDS | 50.0% | |
| GTACCCTCTGCAGATCTGAT+TGG | + | chr8_4:17543280-17543299 | None:intergenic | 50.0% | |
| ! | ATCAGATCTGCAGAGGGTAC+AGG | - | chr8_4:17543280-17543299 | Msa1316630:CDS | 50.0% |
| AGACGGCGAGGGCTTAAAAA+AGG | - | chr8_4:17543414-17543433 | Msa1316630:CDS | 50.0% | |
| GACGGCGAGGGCTTAAAAAA+GGG | - | chr8_4:17543415-17543434 | Msa1316630:CDS | 50.0% | |
| ! | AAGGGTACAAGAGTTGGCCA+AGG | - | chr8_4:17543433-17543452 | Msa1316630:CDS | 50.0% |
| AGTTGGCCAAGGAGCTTTCA+GGG | - | chr8_4:17543444-17543463 | Msa1316630:CDS | 50.0% | |
| CAACTTCCCTGAAAGCTCCT+TGG | + | chr8_4:17543453-17543472 | None:intergenic | 50.0% | |
| AGTGGCCGCCGATCATTATT+TGG | - | chr8_4:17543499-17543518 | Msa1316630:CDS | 50.0% | |
| GGCCATGAGAAAGGATTTGC+TGG | - | chr8_4:17543520-17543539 | Msa1316630:CDS | 50.0% | |
| TGGTGTTCCTCCGACTGTTA+TGG | - | chr8_4:17543540-17543559 | Msa1316630:CDS | 50.0% | |
| CACTTTGCCATAACAGTCGG+AGG | + | chr8_4:17543550-17543569 | None:intergenic | 50.0% | |
| AACTTAGCAGCCAAACCCTC+TGG | + | chr8_4:17543595-17543614 | None:intergenic | 50.0% | |
| GAGGGTTTGGCTGCTAAGTT+TGG | - | chr8_4:17543595-17543614 | Msa1316630:CDS | 50.0% | |
| AGTTGTGAGGATATGGGACC+TGG | - | chr8_4:17543649-17543668 | Msa1316630:CDS | 50.0% | |
| ! | TATGGGACCTGGTGCTTTTC+CGG | - | chr8_4:17543660-17543679 | Msa1316630:CDS | 50.0% |
| GCAAATGCAGATAGGCATGC+TGG | - | chr8_4:17543724-17543743 | Msa1316630:CDS | 50.0% | |
| ! | TGATCTCTGGAGAGTATGGC+TGG | + | chr8_4:17544499-17544518 | None:intergenic | 50.0% |
| CAGGCTTCCAATGGCAAAAG+GGG | + | chr8_4:17544660-17544679 | None:intergenic | 50.0% | |
| TCAATGACTCTCGGCACATC+AGG | + | chr8_4:17544679-17544698 | None:intergenic | 50.0% | |
| GTGCCGAGAGTCATTGAACA+AGG | - | chr8_4:17544682-17544701 | Msa1316630:five_prime_UTR | 50.0% | |
| TGGTGATCACATCAAGGTGC+TGG | + | chr8_4:17544805-17544824 | None:intergenic | 50.0% | |
| ! | AACAAGATGGGAGCGCGTAG+TGG | + | chr8_4:17541902-17541921 | None:intergenic | 55.0% |
| TCCGATGCGTGTGCTACCTT+CGG | - | chr8_4:17542574-17542593 | Msa1316630:intron | 55.0% | |
| TCCGAAGGTAGCACACGCAT+CGG | + | chr8_4:17542578-17542597 | None:intergenic | 55.0% | |
| TGCTGATCCTGAACAGCAGG+AGG | - | chr8_4:17542874-17542893 | Msa1316630:intron | 55.0% | |
| CACACAACCTCCTGCTGTTC+AGG | + | chr8_4:17542884-17542903 | None:intergenic | 55.0% | |
| GCAGGAGGTTGTGTGTAACG+GGG | - | chr8_4:17542889-17542908 | Msa1316630:intron | 55.0% | |
| ! | AGATCTGCAGAGGGTACAGG+TGG | - | chr8_4:17543283-17543302 | Msa1316630:CDS | 55.0% |
| ! | GATCTGCAGAGGGTACAGGT+GGG | - | chr8_4:17543284-17543303 | Msa1316630:CDS | 55.0% |
| ! | ATCTGCAGAGGGTACAGGTG+GGG | - | chr8_4:17543285-17543304 | Msa1316630:CDS | 55.0% |
| GCCTATGGATGAAGAGCCGA+TGG | - | chr8_4:17543357-17543376 | Msa1316630:CDS | 55.0% | |
| !! | GCCATCGGCTCTTCATCCAT+AGG | + | chr8_4:17543361-17543380 | None:intergenic | 55.0% |
| ACCTTTGTCGTTAGACGGCG+AGG | - | chr8_4:17543402-17543421 | Msa1316630:CDS | 55.0% | |
| CCTTTGTCGTTAGACGGCGA+GGG | - | chr8_4:17543403-17543422 | Msa1316630:CDS | 55.0% | |
| GAGTTGGCCAAGGAGCTTTC+AGG | - | chr8_4:17543443-17543462 | Msa1316630:CDS | 55.0% | |
| AATGATCGGCGGCCACTCAT+TGG | + | chr8_4:17543496-17543515 | None:intergenic | 55.0% | |
| TAGCAGCCAAACCCTCTGGA+TGG | + | chr8_4:17543591-17543610 | None:intergenic | 55.0% | |
| ! | ACCTGGTGCTTTTCCGGTGA+AGG | - | chr8_4:17543666-17543685 | Msa1316630:CDS | 55.0% |
| !! | TCCTTCACCGGAAAAGCACC+AGG | + | chr8_4:17543670-17543689 | None:intergenic | 55.0% |
| CTCTTGATGTTCAGGGGAGG+AGG | - | chr8_4:17544341-17544360 | Msa1316630:CDS | 55.0% | |
| TGGTCGAGATTCGGAGAGTG+CGG | + | chr8_4:17544604-17544623 | None:intergenic | 55.0% | |
| ! | GGGATGACCCCTTTTGCCAT+TGG | - | chr8_4:17544650-17544669 | Msa1316630:five_prime_UTR | 55.0% |
| TCGGCACATCAGGCTTCCAA+TGG | + | chr8_4:17544669-17544688 | None:intergenic | 55.0% | |
| CCCTCGCCGTCTAACGACAA+AGG | + | chr8_4:17543406-17543425 | None:intergenic | 60.0% | |
| GAGTATGGCTGGCGAGCTTG+AGG | + | chr8_4:17544488-17544507 | None:intergenic | 60.0% | |
| ! | GGTCGAGATTCGGAGAGTGC+GGG | + | chr8_4:17544603-17544622 | None:intergenic | 60.0% |
| AGAGTGCGGGCGCATTCGAG+TGG | + | chr8_4:17544590-17544609 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 17541845 | 17545021 | 17541845 | ID=Msa1316630;Name=Msa1316630 |
| chr8_4 | mRNA | 17541845 | 17545021 | 17541845 | ID=Msa1316630-mRNA-1;Parent=Msa1316630;Name=Msa1316630-mRNA-1;_AED=0.02;_eAED=0.02;_QI=583|1|1|1|1|1|2|180|596 |
| chr8_4 | exon | 17541845 | 17542414 | 17541845 | ID=Msa1316630-mRNA-1:exon:6359;Parent=Msa1316630-mRNA-1 |
| chr8_4 | exon | 17543038 | 17545021 | 17543038 | ID=Msa1316630-mRNA-1:exon:6358;Parent=Msa1316630-mRNA-1 |
| chr8_4 | five_prime_UTR | 17544439 | 17545021 | 17544439 | ID=Msa1316630-mRNA-1:five_prime_utr;Parent=Msa1316630-mRNA-1 |
| chr8_4 | CDS | 17543038 | 17544438 | 17543038 | ID=Msa1316630-mRNA-1:cds;Parent=Msa1316630-mRNA-1 |
| chr8_4 | CDS | 17542025 | 17542414 | 17542025 | ID=Msa1316630-mRNA-1:cds;Parent=Msa1316630-mRNA-1 |
| chr8_4 | three_prime_UTR | 17541845 | 17542024 | 17541845 | ID=Msa1316630-mRNA-1:three_prime_utr;Parent=Msa1316630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
