AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1007290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1007290 MtrunA17_Chr7g0217681 94.571 571 12 2 1 552 1 571 0.0 1074
Msa1007290 MtrunA17_Chr6g0453421 67.314 566 158 10 1 552 1 553 0.0 673
Msa1007290 MtrunA17_Chr2g0285771 32.597 543 293 16 21 507 22 547 9.22e-72 241
Msa1007290 MtrunA17_Chr2g0285771 26.113 337 196 8 47 347 311 630 4.98e-25 109
Msa1007290 MtrunA17_Chr3g0140741 34.100 478 235 10 27 442 15 474 1.49e-64 223
Msa1007290 MtrunA17_Chr4g0049801 33.333 447 247 11 32 442 4 435 7.18e-61 211
Msa1007290 MtrunA17_Chr4g0049801 28.291 357 177 15 13 312 242 576 2.97e-23 103
Msa1007290 MtrunA17_Chr8g0376551 30.640 594 308 19 13 536 10 569 9.10e-59 206
Msa1007290 MtrunA17_Chr8g0376551 27.796 313 172 10 47 322 313 608 1.91e-24 107
Msa1007290 MtrunA17_Chr4g0002241 30.769 442 236 12 24 447 3 392 2.56e-51 185
Msa1007290 MtrunA17_Chr2g0279641 29.376 497 249 16 25 442 27 500 1.53e-42 162
Msa1007290 MtrunA17_Chr3g0127051 28.636 440 254 12 49 442 63 488 1.15e-41 159
Msa1007290 MtrunA17_Chr3g0127051 35.263 190 98 6 271 438 53 239 3.56e-19 91.3
Msa1007290 MtrunA17_Chr3g0127051 25.648 347 220 10 3 329 293 621 1.27e-17 86.3
Msa1007290 MtrunA17_Chr5g0412061 28.935 432 286 10 39 454 29 455 1.32e-37 146
Msa1007290 MtrunA17_Chr7g0250921 50.888 169 48 5 341 509 12 145 1.09e-32 124
Msa1007290 MtrunA17_Chr1g0184511 33.140 172 97 3 48 208 164 328 1.78e-19 92.0
Msa1007290 MtrunA17_Chr1g0184511 30.508 177 116 2 274 444 160 335 3.08e-15 78.6
Msa1007290 MtrunA17_Chr7g0274301 25.382 327 174 10 48 317 114 427 3.12e-19 90.9
Msa1007290 MtrunA17_Chr7g0274301 25.281 178 132 1 268 444 104 281 1.12e-15 79.7
Msa1007290 MtrunA17_Chr7g0249721 29.787 188 98 4 48 214 99 273 8.04e-19 87.4
Msa1007290 MtrunA17_Chr7g0249721 30.928 194 121 4 282 466 103 292 1.51e-13 71.6
Msa1007290 MtrunA17_Chr2g0298721 30.729 192 122 2 268 453 59 245 1.02e-17 85.9
Msa1007290 MtrunA17_Chr2g0298721 29.885 174 103 2 48 209 69 235 3.41e-15 78.2
Msa1007290 MtrunA17_Chr4g0071791 31.217 189 119 2 271 453 36 219 3.57e-15 77.8
Msa1007290 MtrunA17_Chr4g0071791 32.461 191 109 5 30 208 26 208 2.66e-14 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1007290 AT5G15270.3 58.724 533 192 11 11 531 17 533 0.0 602
Msa1007290 AT5G15270.2 58.733 521 187 11 11 519 17 521 0.0 589
Msa1007290 AT5G15270.1 58.733 521 187 11 11 519 17 521 0.0 589
Msa1007290 AT1G14170.3 50.106 473 179 10 26 475 25 463 2.38e-136 404
Msa1007290 AT1G14170.1 50.330 455 173 8 44 475 14 438 4.42e-135 400
Msa1007290 AT1G14170.2 50.554 451 170 8 48 475 10 430 1.55e-134 399
Msa1007290 AT5G46190.1 34.273 461 240 13 46 454 39 488 5.77e-67 229
Msa1007290 AT5G46190.1 28.481 316 153 10 52 317 320 612 5.39e-24 106
Msa1007290 AT5G46190.4 34.273 461 240 13 46 454 39 488 5.77e-67 229
Msa1007290 AT5G46190.4 28.481 316 153 10 52 317 320 612 5.39e-24 106
Msa1007290 AT5G46190.3 34.273 461 240 13 46 454 39 488 5.77e-67 229
Msa1007290 AT5G46190.3 28.481 316 153 10 52 317 320 612 5.39e-24 106
Msa1007290 AT5G46190.2 34.273 461 240 13 46 454 39 488 2.60e-66 228
Msa1007290 AT5G46190.2 27.869 305 147 10 52 306 320 601 1.04e-21 99.8
Msa1007290 AT4G18375.3 30.179 560 293 21 23 520 7 530 7.00e-61 210
Msa1007290 AT4G18375.2 30.179 560 293 21 23 520 7 530 3.77e-60 210
Msa1007290 AT4G18375.2 27.331 311 164 10 47 329 310 586 8.67e-23 102
Msa1007290 AT1G51580.1 31.881 436 234 12 51 442 21 437 2.54e-52 189
Msa1007290 AT1G51580.1 27.027 185 123 4 30 210 258 434 6.39e-18 87.8
Msa1007290 AT5G53060.3 29.646 452 252 12 38 444 57 487 1.21e-49 180
Msa1007290 AT5G53060.3 28.205 195 121 6 23 208 296 480 3.44e-14 75.9
Msa1007290 AT5G53060.1 29.646 452 252 12 38 444 57 487 1.05e-48 179
Msa1007290 AT5G53060.1 23.547 344 214 12 23 329 296 627 4.13e-14 75.9
Msa1007290 AT2G22600.1 27.887 459 278 15 26 445 2 446 3.44e-33 134
Msa1007290 AT2G03110.2 42.767 159 58 5 82 214 1 152 6.91e-31 118
Msa1007290 AT2G03110.1 42.767 159 58 5 82 214 1 152 6.91e-31 118
Msa1007290 AT2G03110.3 42.767 159 58 5 82 214 1 152 6.91e-31 118
Msa1007290 AT4G18375.1 33.688 282 130 11 247 520 85 317 1.42e-29 120
Msa1007290 AT4G18375.1 27.515 338 168 13 47 356 97 385 7.89e-24 103
Msa1007290 AT5G64390.2 36.872 179 109 1 268 442 441 619 5.12e-27 116
Msa1007290 AT5G64390.2 32.796 186 104 4 38 211 441 617 1.23e-22 102
Msa1007290 AT5G64390.2 32.597 181 95 4 51 210 49 223 8.24e-21 97.1
Msa1007290 AT5G64390.2 33.152 184 79 6 280 433 48 217 2.82e-14 76.6
Msa1007290 AT5G64390.3 36.872 179 109 1 268 442 441 619 5.41e-27 116
Msa1007290 AT5G64390.3 32.796 186 104 4 38 211 441 617 1.32e-22 102
Msa1007290 AT5G64390.3 32.597 181 95 4 51 210 49 223 8.33e-21 97.1
Msa1007290 AT5G64390.3 33.152 184 79 6 280 433 48 217 2.92e-14 76.6
Msa1007290 AT5G64390.1 36.872 179 109 1 268 442 441 619 5.76e-27 116
Msa1007290 AT5G64390.1 32.796 186 104 4 38 211 441 617 1.46e-22 102
Msa1007290 AT5G64390.1 32.597 181 95 4 51 210 49 223 9.44e-21 97.1
Msa1007290 AT5G64390.1 33.152 184 79 6 280 433 48 217 3.14e-14 76.3
Msa1007290 AT3G04610.3 32.948 173 95 3 48 208 162 325 2.71e-20 94.7
Msa1007290 AT3G04610.3 27.528 178 125 1 271 444 155 332 1.23e-16 83.6
Msa1007290 AT3G04610.4 32.948 173 95 3 48 208 162 325 2.71e-20 94.7
Msa1007290 AT3G04610.4 27.528 178 125 1 271 444 155 332 1.23e-16 83.6
Msa1007290 AT3G04610.2 32.948 173 95 3 48 208 186 349 3.19e-20 94.7
Msa1007290 AT3G04610.2 27.528 178 125 1 271 444 179 356 1.42e-16 83.2
Msa1007290 AT3G04610.1 32.948 173 95 3 48 208 186 349 3.19e-20 94.7
Msa1007290 AT3G04610.1 27.528 178 125 1 271 444 179 356 1.42e-16 83.2
Msa1007290 AT4G26000.1 29.379 177 98 4 48 208 73 238 7.46e-17 84.0
Msa1007290 AT4G26000.1 32.222 180 114 3 271 443 66 244 3.87e-15 78.6
Msa1007290 AT5G09560.1 29.778 225 131 6 295 492 320 544 7.20e-15 78.2
Msa1007290 AT5G09560.1 26.316 209 123 6 16 211 279 469 4.03e-12 69.3
Msa1007290 AT5G04430.1 26.846 298 162 12 28 314 17 269 9.73e-12 66.6
Msa1007290 AT5G04430.2 27.243 301 178 14 28 314 17 290 4.51e-11 65.1

Find 308 sgRNAs with CRISPR-Local

Find 526 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCGAATTGGTTGCCTTAT+TGG 0.136643 7_1:+6717851 Msa1007290:CDS
ATGGAACTTGTTCAAGTATT+TGG 0.144742 7_1:+6721137 Msa1007290:three_prime_UTR
TCATGGTGGGGCTCCAATTA+TGG 0.148669 7_1:+6717320 Msa1007290:CDS
CTTTGAGATTCCTTGGATTA+TGG 0.168812 7_1:+6721118 Msa1007290:three_prime_UTR
ACAATTTCTGTTAGAATCTA+TGG 0.177846 7_1:+6719737 Msa1007290:three_prime_UTR
CTCTTTCACTAGCCGGTTAC+TGG 0.187699 7_1:+6717820 Msa1007290:CDS
TTGCTTACTTCTGCAGTTCC+TGG 0.200050 7_1:+6717264 Msa1007290:CDS
ACAATTTCCGTTAGAATCTA+TGG 0.209065 7_1:+6719775 Msa1007290:three_prime_UTR
CAGTTTAGGCAGTAGGCTTC+AGG 0.210067 7_1:-6718979 None:intergenic
CCGTTAGAATCTATGGATAA+TGG 0.220717 7_1:+6719782 Msa1007290:three_prime_UTR
CTGTTAGAATCTATGGATAA+TGG 0.227331 7_1:+6719744 Msa1007290:three_prime_UTR
CAGAAATTGTTTGGGTTGTT+TGG 0.236028 7_1:-6719724 None:intergenic
CTCCGATTGGTGGTGGTTAT+GGG 0.237832 7_1:+6717349 Msa1007290:CDS
GCTCCGATTGGTGGTGGTTA+TGG 0.240110 7_1:+6717348 Msa1007290:CDS
ATCGGAGCCATTCCCATAAT+TGG 0.245633 7_1:-6717333 None:intergenic
GGAGTAGTTTCGTCGGTGTT+AGG 0.249792 7_1:-6714410 None:intergenic
TTTGAATAATATAATGATAT+TGG 0.256594 7_1:+6719350 Msa1007290:three_prime_UTR
ATTAGTCTTGCTCTATGTTT+AGG 0.262619 7_1:+6721059 Msa1007290:three_prime_UTR
ACAGTCTTGTGCGTTAAATT+TGG 0.263618 7_1:+6719392 Msa1007290:three_prime_UTR
AATCAAATTAGGCAGGATTC+TGG 0.274868 7_1:+6717516 Msa1007290:CDS
CTTGGTCGAGGTGGTCCTTA+TGG 0.280832 7_1:+6718476 Msa1007290:CDS
GAATGCAGTTGGATTTCTTC+TGG 0.281160 7_1:+6721235 Msa1007290:three_prime_UTR
GCTTAGGAAGTAAGGTAAAA+TGG 0.285966 7_1:-6719140 None:intergenic
ATCTGACCACTATCTTATAT+TGG 0.286139 7_1:+6719482 Msa1007290:three_prime_UTR
CATATAAAATGTGTGCATAT+TGG 0.287484 7_1:+6720700 Msa1007290:three_prime_UTR
GTTATTTATCATTGATCAAT+AGG 0.292431 7_1:+6720846 Msa1007290:three_prime_UTR
TTGCTCTATGTTTAGGTTGT+TGG 0.302791 7_1:+6721066 Msa1007290:three_prime_UTR
GCTAACATTGGAGGTGTTAT+AGG 0.305964 7_1:+6717474 Msa1007290:CDS
CAAAATAGTGAGTGTTAAAA+TGG 0.309031 7_1:-6720766 None:intergenic
TTGATCCTCCTTTACCAATA+AGG 0.310702 7_1:-6717865 None:intergenic
TGTTCAAGTATTTGGAGATA+TGG 0.315324 7_1:+6721145 Msa1007290:three_prime_UTR
TTTGTGAATTTGTGAGTTTA+GGG 0.317211 7_1:-6714277 None:intergenic
AGATTCTAACAGAAATTGTT+TGG 0.317530 7_1:-6719733 None:intergenic
CGTTAGAATCTATGGATAAT+GGG 0.317951 7_1:+6719783 Msa1007290:three_prime_UTR
TTTGCATCTGGCGACGGTTA+TGG 0.318019 7_1:+6718323 Msa1007290:CDS
GTTTGTGAATTTGTGAGTTT+AGG 0.318513 7_1:-6714278 None:intergenic
CAACCTTGATGCCTCTATCT+AGG 0.320441 7_1:+6719080 Msa1007290:three_prime_UTR
GAGAAAGTTGAAAGAGATTC+TGG 0.321272 7_1:+6717791 Msa1007290:CDS
GGCAGATTGTTCAGAATATA+AGG 0.321391 7_1:+6716103 Msa1007290:CDS
CACGGCTTAGCCACTAGTTA+AGG 0.322342 7_1:+6720340 Msa1007290:three_prime_UTR
TGAGATTGCTGTTGTGAAAA+AGG 0.325029 7_1:+6717188 Msa1007290:CDS
AAATGGCAACGCTAGCTAAA+TGG 0.327704 7_1:-6720670 None:intergenic
CTTTGTCCGGTTCGCAAAAT+CGG 0.328779 7_1:+6714479 Msa1007290:CDS
ACGGAACGGACTAGTACTTC+TGG 0.328930 7_1:+6718518 Msa1007290:CDS
ACCAGAATCTTCAAAATCAT+TGG 0.331469 7_1:-6714633 None:intergenic
TGCTTACTTCTGCAGTTCCT+GGG 0.334858 7_1:+6717265 Msa1007290:CDS
TGCAAAATATTGTGAAATAA+TGG 0.336117 7_1:+6720076 Msa1007290:three_prime_UTR
TTGAAACCATCTGGTCCTTC+TGG 0.338732 7_1:-6718224 None:intergenic
CGCAAAATCGGCAGCATCAT+TGG 0.340343 7_1:+6714491 Msa1007290:CDS
TGTTAGAATCTATGGATAAT+GGG 0.347034 7_1:+6719745 Msa1007290:three_prime_UTR
TAAGAGATTGAGGGCCTGTT+TGG 0.348985 7_1:+6720410 Msa1007290:three_prime_UTR
GGTGGTCCTTATGGAGCTTA+TGG 0.351103 7_1:+6718485 Msa1007290:CDS
GAACTCTGACGAGCTTGTTC+AGG 0.352751 7_1:+6716185 Msa1007290:CDS
TAAGATTGCAAAAGGTCATT+TGG 0.353640 7_1:+6721291 Msa1007290:three_prime_UTR
TCGTTGGTGTTTAGTTTGAA+TGG 0.355963 7_1:+6719594 Msa1007290:three_prime_UTR
CATGCCACTTTGAGATTCCT+TGG 0.358513 7_1:+6721111 Msa1007290:three_prime_UTR
TTAGTTTGAATGGGCTAGTC+TGG 0.362522 7_1:+6719604 Msa1007290:three_prime_UTR
GATTGTCTGGTGGTGTTTCT+CGG 0.365737 7_1:+6718725 Msa1007290:CDS
CTATCCACGGTCCATGTATC+CGG 0.368979 7_1:+6717395 Msa1007290:CDS
CTGAAGCCTACTGCCTAAAC+TGG 0.371136 7_1:+6718980 Msa1007290:three_prime_UTR
TTCAATAGTCTCCACATGTT+TGG 0.377132 7_1:-6719106 None:intergenic
CAATGGTGGGTTCTCATGGT+GGG 0.382167 7_1:+6717307 Msa1007290:CDS
TAGGGAGATCCTCCTTAGAT+AGG 0.383114 7_1:-6717931 None:intergenic
TAACATCCGCATCCTATCTA+AGG 0.386726 7_1:+6717919 Msa1007290:CDS
CATGGTGGGGCTCCAATTAT+GGG 0.388437 7_1:+6717321 Msa1007290:CDS
GTGGTATAATAAATCAAATT+AGG 0.394131 7_1:+6717505 Msa1007290:CDS
CCGATTGGTGGTGGTTATGG+GGG 0.395303 7_1:+6717351 Msa1007290:CDS
ATCAAATTAGGCAGGATTCT+GGG 0.396448 7_1:+6717517 Msa1007290:CDS
AACGGTAAACGGTGTCGTCT+TGG 0.400100 7_1:-6714454 None:intergenic
CGGACAAAGGTAACGGTAAA+CGG 0.401582 7_1:-6714465 None:intergenic
ACGGCTTAGCCACTAGTTAA+GGG 0.405940 7_1:+6720341 Msa1007290:three_prime_UTR
GTATGCGGCCGGTGGTTCAA+TGG 0.406315 7_1:+6717290 Msa1007290:CDS
TCCGATTGGTGGTGGTTATG+GGG 0.406534 7_1:+6717350 Msa1007290:CDS
CCCAGTGACTGACAAATTCA+TGG 0.406816 7_1:+6719056 Msa1007290:three_prime_UTR
AGGGTTACGGCGTTTGTTGT+TGG 0.407039 7_1:-6714390 None:intergenic
TGACTGCTTAATAGCCATTT+CGG 0.407826 7_1:+6717578 Msa1007290:CDS
TCATAAACTCAGGGTCCGTT+TGG 0.409486 7_1:-6720618 None:intergenic
TGAAGATGAAGACGTTGATA+TGG 0.412280 7_1:+6714730 Msa1007290:CDS
AAAATTGTATATTCATAAGT+TGG 0.414004 7_1:+6720500 Msa1007290:three_prime_UTR
CGTTGGTGTTTAGTTTGAAT+GGG 0.415931 7_1:+6719595 Msa1007290:three_prime_UTR
ACGGTAAACGGTGTCGTCTT+GGG 0.416434 7_1:-6714453 None:intergenic
TGCATATTGGATTGTCCTCT+AGG 0.416941 7_1:+6720713 Msa1007290:three_prime_UTR
GCTATTTAAAACAACTGCTC+TGG 0.418782 7_1:-6719873 None:intergenic
ATATTTCATCATTCGATCAC+TGG 0.420864 7_1:+6720813 Msa1007290:three_prime_UTR
TGCGCAGATTAGGATTCTTA+AGG 0.421502 7_1:+6716137 Msa1007290:CDS
GGCGACGGTTATGGAAACTA+TGG 0.421841 7_1:+6718332 Msa1007290:CDS
TTCTACCTCTCTCGCCGAAA+TGG 0.422570 7_1:-6717592 None:intergenic
GTGAGACTGGTGCGCAGATT+AGG 0.423919 7_1:+6716127 Msa1007290:CDS
GCCATGAATTTGTCAGTCAC+TGG 0.424683 7_1:-6719057 None:intergenic
GATCAGATTGGGTGTGTGAT+TGG 0.428636 7_1:+6716072 Msa1007290:intron
AACCATGGTTACTAAAACCT+TGG 0.433601 7_1:+6718754 Msa1007290:exon
GAATGAGACAGGTAATCTAT+TGG 0.436368 7_1:+6721257 Msa1007290:three_prime_UTR
GAGTAGTTTCGTCGGTGTTA+GGG 0.437592 7_1:-6714409 None:intergenic
TTTCGTCGGTGTTAGGGTTA+CGG 0.437692 7_1:-6714403 None:intergenic
TATAACCAGAGGAGCCGAAC+TGG 0.439048 7_1:-6719541 None:intergenic
GGGTGTGTGATTGGGAAAGG+TGG 0.439775 7_1:+6716081 Msa1007290:CDS
TCTGGTCCTTCTGGCGAAGC+AGG 0.442517 7_1:-6718215 None:intergenic
CGAATCGGTGAAACTGTTCC+TGG 0.442677 7_1:+6714566 Msa1007290:CDS
GATTCTAACAGAAATTGTTT+GGG 0.442973 7_1:-6719732 None:intergenic
CAATGTTCATTGAATGCAGT+TGG 0.445821 7_1:+6721224 Msa1007290:three_prime_UTR
TTCAACTTTCTCACTGCACC+GGG 0.446932 7_1:-6717780 None:intergenic
CTGCTATGGATGCACTTGTC+AGG 0.448774 7_1:+6714669 Msa1007290:CDS
TATTATTTATAAATTTGTTA+AGG 0.449726 7_1:-6720537 None:intergenic
ATCCCTTGAGCCCGGATACA+TGG 0.451086 7_1:-6717406 None:intergenic
AACCTTGATGCCTCTATCTA+GGG 0.451615 7_1:+6719081 Msa1007290:three_prime_UTR
TACTTGCACAAGAGCGTCCT+TGG 0.454929 7_1:-6718114 None:intergenic
CGTCTTCCAGTTTAGGCAGT+AGG 0.458624 7_1:-6718986 None:intergenic
CCTTCATAGTTGAAACCATC+TGG 0.458835 7_1:-6718233 None:intergenic
TATTCTTATTCTGATGGCTA+TGG 0.459228 7_1:+6718287 Msa1007290:CDS
TCGCTGAATCTGCAGATCTC+TGG 0.459290 7_1:+6717165 Msa1007290:intron
AAAACAAGCTTAATCCAAAC+AGG 0.461819 7_1:-6720424 None:intergenic
GTTATGTGAAATGTGTCTCT+TGG 0.468813 7_1:-6714431 None:intergenic
TGAGTTTATGTGTCCTGCTA+TGG 0.469447 7_1:+6714655 Msa1007290:CDS
AGTTTAGGCAGTAGGCTTCA+GGG 0.470110 7_1:-6718978 None:intergenic
GTATTCTCTCTTTCACTAGC+CGG 0.470671 7_1:+6717813 Msa1007290:CDS
AAATATCAAGGTTGATAGTT+CGG 0.471588 7_1:+6717542 Msa1007290:CDS
GATTTCTTCTGGAATGAGAC+AGG 0.471703 7_1:+6721246 Msa1007290:three_prime_UTR
GTTCGCAAGCTTAGGAAGTA+AGG 0.474273 7_1:-6719148 None:intergenic
AATAATCAATTAATCACAAA+TGG 0.474294 7_1:-6720968 None:intergenic
TATGGTAAATAGTTGAGATT+CGG 0.474547 7_1:+6721163 Msa1007290:three_prime_UTR
GGTTCAATGGTGGGTTCTCA+TGG 0.474828 7_1:+6717303 Msa1007290:CDS
AACAAGCATGGATTGGAAGT+TGG 0.475843 7_1:-6720288 None:intergenic
TTCTCACAATTCACAATGGC+TGG 0.477989 7_1:+6714305 Msa1007290:exon
CATTGGAGGTGTTATAGGTA+AGG 0.479056 7_1:+6717479 Msa1007290:CDS
TGGCTTTACAGCCTTAGCTC+TGG 0.479442 7_1:-6720180 None:intergenic
TCCTAACATCATAGTCGTCC+AGG 0.479729 7_1:-6720204 None:intergenic
CGGAACGGACTAGTACTTCT+GGG 0.479809 7_1:+6718519 Msa1007290:CDS
TGCAACTGAAGATGATGAAA+TGG 0.481672 7_1:+6717958 Msa1007290:CDS
TTCATCTCGTCTTCCAGTTT+AGG 0.485689 7_1:-6718993 None:intergenic
ATTTAACGCACAAGACTGTA+AGG 0.488292 7_1:-6719388 None:intergenic
TCAAAGCGCAAAGCGGCAGC+CGG 0.488898 7_1:-6716164 None:intergenic
TGAATACAAGATTGGTTCGT+TGG 0.490609 7_1:+6719578 Msa1007290:three_prime_UTR
TGTGTTTATGCAGTTCTTTG+AGG 0.490670 7_1:+6717715 Msa1007290:intron
ATTGGTTGCCTTATTGGTAA+AGG 0.491056 7_1:+6717857 Msa1007290:CDS
TTTCAACTTTCTCACTGCAC+CGG 0.491500 7_1:-6717781 None:intergenic
AGATAGTACAGGTATACAAC+TGG 0.491875 7_1:-6719270 None:intergenic
TGCGGCCGGTGGTTCAATGG+TGG 0.491994 7_1:+6717293 Msa1007290:CDS
CTGGTGTCAAGCTCTCGAAT+TGG 0.492427 7_1:+6717839 Msa1007290:CDS
TCCTGGACGACTATGATGTT+AGG 0.492441 7_1:+6720203 Msa1007290:three_prime_UTR
GAGAGCTTGACACCAGTAAC+CGG 0.492678 7_1:-6717832 None:intergenic
AATGAAACTAAACACCGAAC+TGG 0.494714 7_1:+6720226 Msa1007290:three_prime_UTR
CTAAGGCTGTAAAGCCATCC+TGG 0.496468 7_1:+6720186 Msa1007290:three_prime_UTR
GTTCCTGGGGTGTATGCGGC+CGG 0.498146 7_1:+6717279 Msa1007290:CDS
GAGCACATGTTCGCAAGCTT+AGG 0.498749 7_1:-6719156 None:intergenic
CTTGTATATGTAAGAGATTG+AGG 0.500205 7_1:+6720400 Msa1007290:three_prime_UTR
TCTTATTCTGATGGCTATGG+AGG 0.500846 7_1:+6718290 Msa1007290:CDS
TTGTGATGAGCGTGTTGTTA+CGG 0.501109 7_1:+6714589 Msa1007290:CDS
ATCAGATTGGGTGTGTGATT+GGG 0.501919 7_1:+6716073 Msa1007290:intron
CGTTTACCGTTACCTTTGTC+CGG 0.503615 7_1:+6714466 Msa1007290:CDS
AAAGGCTCTGATTCAGGTTG+CGG 0.503958 7_1:+6717206 Msa1007290:CDS
TATAAGTACAAGAGGTTATG+AGG 0.504979 7_1:+6721021 Msa1007290:three_prime_UTR
CTCAATCTCTTACATATACA+AGG 0.508204 7_1:-6720399 None:intergenic
TCAATGGTGGGTTCTCATGG+TGG 0.510611 7_1:+6717306 Msa1007290:CDS
AGATTGTCCGACAGATTGTC+TGG 0.513148 7_1:+6718712 Msa1007290:CDS
CAAGACTAATATCCAACAGT+TGG 0.514667 7_1:-6721046 None:intergenic
CACAGCTGCTTCAATTGTTG+CGG 0.514880 7_1:-6717747 None:intergenic
GAATGGACTGAATACAAGAT+TGG 0.515824 7_1:+6719570 Msa1007290:three_prime_UTR
ATGTTTGGTCCCCTAGATAG+AGG 0.517490 7_1:-6719091 None:intergenic
TATAATAAATCAAATTAGGC+AGG 0.519067 7_1:+6717509 Msa1007290:CDS
TAGCAGTTGGACAAACAAAT+CGG 0.520156 7_1:-6717455 None:intergenic
GCAGGAAGATATGCAAGTAC+TGG 0.523882 7_1:-6718197 None:intergenic
AAACCTTGGTGGGTCCCTGC+AGG 0.524068 7_1:+6718768 Msa1007290:exon
CCAGATGGTTTCAACTATGA+AGG 0.524623 7_1:+6718233 Msa1007290:CDS
ATCGGCAGCATCATTGGCCG+CGG 0.525073 7_1:+6714497 Msa1007290:CDS
CATATGCGGCAGCTTGGTCG+AGG 0.527118 7_1:+6718464 Msa1007290:intron
GCGGCCGGTGGTTCAATGGT+GGG 0.527583 7_1:+6717294 Msa1007290:CDS
AACTATACACCACACCAGTT+CGG 0.527690 7_1:-6720240 None:intergenic
GGTGGCTATTCTTATTCTGA+TGG 0.527717 7_1:+6718281 Msa1007290:CDS
CTCTACACAACAATGCTGTA+AGG 0.527950 7_1:-6720108 None:intergenic
TTGTATATGTAAGAGATTGA+GGG 0.528732 7_1:+6720401 Msa1007290:three_prime_UTR
ATGGGAATGGCTCCGATTGG+TGG 0.530538 7_1:+6717339 Msa1007290:CDS
TATCTTCCTGCTTCGCCAGA+AGG 0.531028 7_1:+6718209 Msa1007290:CDS
CCTCAGCAATCACCTTCTGA+TGG 0.531133 7_1:-6714694 None:intergenic
TTAGGATTCTTAAGGATGAC+CGG 0.532010 7_1:+6716145 Msa1007290:CDS
GCAAAACCAATATAAGATAG+TGG 0.533028 7_1:-6719488 None:intergenic
TATTTCATCATTCGATCACT+GGG 0.537759 7_1:+6720814 Msa1007290:three_prime_UTR
CTCTGGTTATATGAGCTGAA+TGG 0.538675 7_1:+6719553 Msa1007290:three_prime_UTR
TAACTTCCATAAGCTCCATA+AGG 0.538976 7_1:-6718491 None:intergenic
GTTTGTCCAACTGCTAACAT+TGG 0.542273 7_1:+6717462 Msa1007290:CDS
GGCAGCATCATTGGCCGCGG+CGG 0.543522 7_1:+6714500 Msa1007290:CDS
GGTGTGTGATTGGGAAAGGT+GGG 0.544155 7_1:+6716082 Msa1007290:CDS
GGATTCTGGGGCAAATATCA+AGG 0.544315 7_1:+6717530 Msa1007290:CDS
TATCCACGGTCCATGTATCC+GGG 0.544857 7_1:+6717396 Msa1007290:CDS
TGTTTAACATGGCATTTATG+TGG 0.545748 7_1:-6720942 None:intergenic
CATCATTCGATCACTGGGAA+AGG 0.546009 7_1:+6720819 Msa1007290:three_prime_UTR
ATTGGGTGTGTGATTGGGAA+AGG 0.547162 7_1:+6716078 Msa1007290:CDS
CCATGAATTTGTCAGTCACT+GGG 0.547663 7_1:-6719056 None:intergenic
AAGACTAATATCCAACAGTT+GGG 0.549472 7_1:-6721045 None:intergenic
TATCCGGGCTCAAGGGATGA+AGG 0.550864 7_1:+6717411 Msa1007290:CDS
TTCAACTATGAAGGTAGAGA+TGG 0.552487 7_1:+6718242 Msa1007290:CDS
TTGATTTATATAAATTGTGA+AGG 0.552775 7_1:+6719813 Msa1007290:three_prime_UTR
CAGAATATAAGGAGTGAGAC+TGG 0.554815 7_1:+6716114 Msa1007290:CDS
GCATATTGGATTGTCCTCTA+GGG 0.556453 7_1:+6720714 Msa1007290:three_prime_UTR
TGAAGACGTTGATATGGAGA+AGG 0.558240 7_1:+6714736 Msa1007290:CDS
TCTACCTTTGAGGTCTAGCA+CGG 0.558308 7_1:+6720322 Msa1007290:three_prime_UTR
AATGGTGGGTTCTCATGGTG+GGG 0.558992 7_1:+6717308 Msa1007290:CDS
GAACCTTCATCCCTTGAGCC+CGG 0.559965 7_1:-6717414 None:intergenic
CTGACAAGTGCATCCATAGC+AGG 0.560065 7_1:-6714668 None:intergenic
GGTTGCCTTATTGGTAAAGG+AGG 0.560805 7_1:+6717860 Msa1007290:CDS
TCAAATTAGGCAGGATTCTG+GGG 0.561605 7_1:+6717518 Msa1007290:CDS
GGAATGGCTCCGATTGGTGG+TGG 0.561692 7_1:+6717342 Msa1007290:CDS
GTCTCTTGGAGTAGTTTCGT+CGG 0.561776 7_1:-6714417 None:intergenic
TGGAAACTATGGAAGTTCAC+AGG 0.562268 7_1:+6718343 Msa1007290:CDS
GCTTACTTCTGCAGTTCCTG+GGG 0.562545 7_1:+6717266 Msa1007290:CDS
CATGGTTACTAAAACCTTGG+TGG 0.562818 7_1:+6718757 Msa1007290:exon
ATTTGTCAGTCACTGGGTAG+AGG 0.566631 7_1:-6719050 None:intergenic
CGACAAAACAAAGATAGTAC+AGG 0.570158 7_1:-6719281 None:intergenic
GGTTATGAGGACCCAACTGT+TGG 0.571493 7_1:+6721034 Msa1007290:three_prime_UTR
GTCCATGTATCCGGGCTCAA+GGG 0.574091 7_1:+6717404 Msa1007290:CDS
ACACCTCCAATGTTAGCAGT+TGG 0.575469 7_1:-6717468 None:intergenic
AGAACCCACCATTGAACCAC+CGG 0.576052 7_1:-6717298 None:intergenic
CTCTTGTGCAAGTACTTACC+CGG 0.576314 7_1:+6718123 Msa1007290:CDS
ACAAATGGTGCTGTTTAACA+TGG 0.578000 7_1:-6720953 None:intergenic
AATAGCCATTTCGGCGAGAG+AGG 0.578458 7_1:+6717587 Msa1007290:CDS
TGTCCAACTGCTAACATTGG+AGG 0.579765 7_1:+6717465 Msa1007290:CDS
ACGAAGGCGAAGATTCGAAT+CGG 0.580163 7_1:+6714551 Msa1007290:CDS
TCCCCTAGATAGAGGCATCA+AGG 0.580833 7_1:-6719083 None:intergenic
TACAGGTATACAACTGGCAA+AGG 0.581153 7_1:-6719264 None:intergenic
ACATGTCACATCATAAACTC+AGG 0.582005 7_1:-6720628 None:intergenic
TCAATGAACATTGCAGACCA+AGG 0.582036 7_1:-6721214 None:intergenic
CAATGAACATTGCAGACCAA+GGG 0.582325 7_1:-6721213 None:intergenic
CTGGGTAGAGGCGTCAAGGT+GGG 0.583814 7_1:-6719038 None:intergenic
GTCACTGGGTAGAGGCGTCA+AGG 0.585145 7_1:-6719042 None:intergenic
CTCTGATTCAGGTTGCGGCA+CGG 0.585528 7_1:+6717211 Msa1007290:CDS
GGTGTTATAGGTAAGGGCGG+TGG 0.586093 7_1:+6717486 Msa1007290:CDS
CTTACAGCATTGTTGTGTAG+AGG 0.586603 7_1:+6720109 Msa1007290:three_prime_UTR
CAATCATTACTGAGATGAGA+AGG 0.587009 7_1:+6717885 Msa1007290:CDS
CTAGATAGAGGCATCAAGGT+TGG 0.587204 7_1:-6719079 None:intergenic
AAGGGATGAAGGTTCTCCGA+TGG 0.587530 7_1:+6717422 Msa1007290:CDS
TTCGATCACTGGGAAAGGCT+AGG 0.587738 7_1:+6720824 Msa1007290:three_prime_UTR
TGGGGCTCCAATTATGGGAA+TGG 0.589051 7_1:+6717326 Msa1007290:CDS
TGCAGTTCCTGGGGTGTATG+CGG 0.590287 7_1:+6717275 Msa1007290:CDS
CCTGGGGTGTATGCGGCCGG+TGG 0.591168 7_1:+6717282 Msa1007290:CDS
ATTGGAGGTGTTATAGGTAA+GGG 0.591478 7_1:+6717480 Msa1007290:CDS
GGAAGATATGCAAGTACTGG+TGG 0.592745 7_1:-6718194 None:intergenic
GTTGATAGTTCGGCAACTGA+AGG 0.592881 7_1:+6717552 Msa1007290:CDS
TAAATTTGGAAGACCTTGTG+TGG 0.593111 7_1:+6719406 Msa1007290:three_prime_UTR
ATGGTTACTAAAACCTTGGT+GGG 0.595179 7_1:+6718758 Msa1007290:exon
AGCAAATGTTGAGTACGTGA+AGG 0.595406 7_1:-6717246 None:intergenic
GTTAGTCGTATAAGTACAAG+AGG 0.595664 7_1:+6721013 Msa1007290:three_prime_UTR
ATCTGTCGTCGATCTACTGT+AGG 0.596009 7_1:+6720368 Msa1007290:three_prime_UTR
ACGTGTTCAGAAGACAGATA+AGG 0.596941 7_1:-6720992 None:intergenic
GGTAGAGATGGAAGACGACA+TGG 0.599304 7_1:+6718254 Msa1007290:CDS
AGCTTATGGAAGTTATGCTA+CGG 0.600781 7_1:+6718499 Msa1007290:CDS
TTATCATTGATCAATAGGAA+AGG 0.601346 7_1:+6720851 Msa1007290:three_prime_UTR
TGAAGATGATGAAATGGTGC+AGG 0.602115 7_1:+6717964 Msa1007290:CDS
TGGATCAGTGTTGTCAATTG+CGG 0.602560 7_1:-6720160 None:intergenic
GATCCTCCTTAGATAGGATG+CGG 0.604218 7_1:-6717925 None:intergenic
TGAACAAGTTCCATAATCCA+AGG 0.604569 7_1:-6721128 None:intergenic
ATGCGGCAGCTTGGTCGAGG+TGG 0.604698 7_1:+6718467 Msa1007290:intron
ATTGATCAATAGGAAAGGCT+AGG 0.605002 7_1:+6720856 Msa1007290:three_prime_UTR
ACATTGCAGACCAAGGGGAG+AGG 0.605920 7_1:-6721207 None:intergenic
CGATTGGTGGTGGTTATGGG+GGG 0.606850 7_1:+6717352 Msa1007290:CDS
ATTATGGGAATGGCTCCGAT+TGG 0.609678 7_1:+6717336 Msa1007290:CDS
CCATTATCCATAGATTCTAA+CGG 0.610541 7_1:-6719782 None:intergenic
ATTGCGGATAGCGGAAATAG+CGG 0.611559 7_1:-6720144 None:intergenic
CATCCGCATCCTATCTAAGG+AGG 0.616844 7_1:+6717922 Msa1007290:CDS
GATGGAAGACGACATGGACG+TGG 0.622802 7_1:+6718260 Msa1007290:CDS
TGCGAACCGGACAAAGGTAA+CGG 0.624302 7_1:-6714472 None:intergenic
GCTGGTCAAAGAACATCCTA+CGG 0.624883 7_1:+6714323 Msa1007290:CDS
TATCTAGGGGACCAAACATG+TGG 0.625382 7_1:+6719095 Msa1007290:three_prime_UTR
GCAAATGTTGAGTACGTGAA+GGG 0.628954 7_1:-6717245 None:intergenic
GCTTCGCCAGAAGGACCAGA+TGG 0.629484 7_1:+6718218 Msa1007290:CDS
AACATCATAGTCGTCCAGGA+TGG 0.635584 7_1:-6720200 None:intergenic
ACAACACTGATCCAGAGCTA+AGG 0.637004 7_1:+6720169 Msa1007290:three_prime_UTR
GTGTGAACGTTTGTTGCCGT+AGG 0.637858 7_1:-6714339 None:intergenic
TAAGCCGTGCTAGACCTCAA+AGG 0.638003 7_1:-6720326 None:intergenic
GCAAGTAACTATGAACTACC+AGG 0.638924 7_1:-6719310 None:intergenic
ATTAAATGAACTAGCCCTAG+AGG 0.639234 7_1:-6720728 None:intergenic
ATTGCTGAGGATTTGCGTGG+TGG 0.640532 7_1:+6714707 Msa1007290:CDS
GCAGTGAGTTTGTCAAACCA+TGG 0.642376 7_1:-6719016 None:intergenic
GAAGCTAAAATCTACCTGCA+GGG 0.642778 7_1:-6718782 None:intergenic
ACTGCAATACAGACCACACA+AGG 0.647395 7_1:-6719419 None:intergenic
GTGTTGTCAATTGCGGATAG+CGG 0.651012 7_1:-6720153 None:intergenic
ACAACACGCTCATCACAACC+AGG 0.651674 7_1:-6714584 None:intergenic
GGAAGACGACATGGACGTGG+TGG 0.651683 7_1:+6718263 Msa1007290:CDS
ACCTTGATGCCTCTATCTAG+GGG 0.653496 7_1:+6719082 Msa1007290:three_prime_UTR
CTACCTGCAGGGACCCACCA+AGG 0.655648 7_1:-6718771 None:intergenic
CCATCAGAAGGTGATTGCTG+AGG 0.656110 7_1:+6714694 Msa1007290:CDS
ACTTGTCAGGATCCATCAGA+AGG 0.657484 7_1:+6714682 Msa1007290:CDS
TGTCTGGTGGTGTTTCTCGG+AGG 0.658963 7_1:+6718728 Msa1007290:CDS
CTGGAAGACGAGATGAACCA+TGG 0.661796 7_1:+6718999 Msa1007290:three_prime_UTR
GAAGTAAGGTAAAATGGACA+TGG 0.661826 7_1:-6719134 None:intergenic
ACAACTCCGTCTTGATACGA+AGG 0.662897 7_1:+6714535 Msa1007290:CDS
CAGATGCAACCCTTAACTAG+TGG 0.665116 7_1:-6720350 None:intergenic
AATCGGACTGAAAACTCCAT+CGG 0.665768 7_1:-6717438 None:intergenic
ACAATTCTCACAATTCACAA+TGG 0.665812 7_1:+6714301 Msa1007290:exon
AACACCACCAGACAATCTGT+CGG 0.666702 7_1:-6718719 None:intergenic
ACTGGGTAGAGGCGTCAAGG+TGG 0.670676 7_1:-6719039 None:intergenic
AACTAAACACCGAACTGGTG+TGG 0.672580 7_1:+6720231 Msa1007290:three_prime_UTR
TAATCCAAGGAATCTCAAAG+TGG 0.676593 7_1:-6721115 None:intergenic
CATTCAGCTCATATAACCAG+AGG 0.678713 7_1:-6719552 None:intergenic
GTGATTGCTGAGGATTTGCG+TGG 0.679408 7_1:+6714704 Msa1007290:CDS
GTTTCACGATCTCGCCGCCG+CGG 0.681169 7_1:-6714514 None:intergenic
AATGAACATTGCAGACCAAG+GGG 0.681914 7_1:-6721212 None:intergenic
TCTTCGCCTTCGTATCAAGA+CGG 0.684376 7_1:-6714541 None:intergenic
CATGTCACATCATAAACTCA+GGG 0.685338 7_1:-6720627 None:intergenic
ATGGAAGTTATGCTACGGAA+CGG 0.690137 7_1:+6718504 Msa1007290:CDS
TTTAGATCTAAAACACCATG+TGG 0.696013 7_1:+6719234 Msa1007290:three_prime_UTR
TCAACTTTCTCACTGCACCG+GGG 0.700169 7_1:-6717779 None:intergenic
GTTTCTCGGAGGAGAAACCA+TGG 0.701996 7_1:+6718739 Msa1007290:CDS
GGCAAAGGAACATAGCCACA+TGG 0.702373 7_1:-6719249 None:intergenic
TCAGAGTTCAAAGCGCAAAG+CGG 0.710111 7_1:-6716171 None:intergenic
GGAGGTGTTATAGGTAAGGG+CGG 0.712082 7_1:+6717483 Msa1007290:CDS
TTGTCCGACAGATTGTCTGG+TGG 0.724794 7_1:+6718715 Msa1007290:CDS
GTGATGTTGGAGACTATCCA+CGG 0.725781 7_1:+6717382 Msa1007290:CDS
GAGCCCGGATACATGGACCG+TGG 0.743404 7_1:-6717399 None:intergenic
GCAATAGCGCTATTGCCTAG+CGG 0.755960 7_1:+6719908 Msa1007290:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAAAAAAAATTTAATTTT+TGG + chr7_1:6714771-6714790 Msa1007290:intron 0.0%
!! AAAGAATATGATATAATATT+TGG + chr7_1:6715024-6715043 Msa1007290:intron 10.0%
!! TTTGAATAATATAATGATAT+TGG + chr7_1:6719350-6719369 Msa1007290:three_prime_UTR 10.0%
!!! TTTTTTTTTGCTTATAATAG+TGG - chr7_1:6715500-6715519 None:intergenic 15.0%
!! TTATTCAATGAATCTAAAAA+TGG - chr7_1:6715755-6715774 None:intergenic 15.0%
!!! ATGTATCTAAAGTATATTAT+AGG - chr7_1:6715791-6715810 None:intergenic 15.0%
!! AATAAAAAAAATCACTTGTT+AGG - chr7_1:6715829-6715848 None:intergenic 15.0%
!!! AATCTAATATTTTCAAATAG+CGG + chr7_1:6716539-6716558 Msa1007290:intron 15.0%
!! TTTAATTATTGTTTCATATG+CGG + chr7_1:6718450-6718469 Msa1007290:intron 15.0%
!! TTGATTTATATAAATTGTGA+AGG + chr7_1:6719813-6719832 Msa1007290:three_prime_UTR 15.0%
!! AAAATTGTATATTCATAAGT+TGG + chr7_1:6720500-6720519 Msa1007290:three_prime_UTR 15.0%
!!! TAATTGTATTGTATGTTTTT+AGG + chr7_1:6720911-6720930 Msa1007290:three_prime_UTR 15.0%
!! AATAATCAATTAATCACAAA+TGG - chr7_1:6720971-6720990 None:intergenic 15.0%
!!! TATTTTATGAGTTATGCTAT+TGG + chr7_1:6714899-6714918 Msa1007290:intron 20.0%
!!! ATTTTATGAGTTATGCTATT+GGG + chr7_1:6714900-6714919 Msa1007290:intron 20.0%
!! ATGATATAATATTTGGTATC+AGG + chr7_1:6715031-6715050 Msa1007290:intron 20.0%
!! TGATATAATATTTGGTATCA+GGG + chr7_1:6715032-6715051 Msa1007290:intron 20.0%
!! ACAAAATATCAGAAAGATTA+GGG - chr7_1:6715989-6716008 None:intergenic 20.0%
!! GTGGTATAATAAATCAAATT+AGG + chr7_1:6717505-6717524 Msa1007290:CDS 20.0%
!! TATAATAAATCAAATTAGGC+AGG + chr7_1:6717509-6717528 Msa1007290:CDS 20.0%
!!! AATCAATTTGTTTTGTCATA+TGG + chr7_1:6717643-6717662 Msa1007290:intron 20.0%
!!! ATCAATTTGTTTTGTCATAT+GGG + chr7_1:6717644-6717663 Msa1007290:intron 20.0%
!! TAAAATCCTGGAAAAATTAA+TGG - chr7_1:6718382-6718401 None:intergenic 20.0%
!! ATAAACTACAAAATAAATCG+AGG - chr7_1:6718807-6718826 None:intergenic 20.0%
!!! TTAAGGAAAGCTATTTTTAT+AGG - chr7_1:6719189-6719208 None:intergenic 20.0%
!! TACAAATCTCATTCTTTAAT+AGG + chr7_1:6719953-6719972 Msa1007290:intron 20.0%
!! TGCAAAATATTGTGAAATAA+TGG + chr7_1:6720076-6720095 Msa1007290:three_prime_UTR 20.0%
!!! TTTTCTAGTACATTTCTAAT+GGG + chr7_1:6720261-6720280 Msa1007290:three_prime_UTR 20.0%
!! TAAAAATAAGCTAATCCAAA+CGG + chr7_1:6720603-6720622 Msa1007290:three_prime_UTR 20.0%
!!! ATTTTATATGGGAAGTAAAA+TGG - chr7_1:6720690-6720709 None:intergenic 20.0%
!!! AATATGCACACATTTTATAT+GGG - chr7_1:6720701-6720720 None:intergenic 20.0%
!! GTTATTTATCATTGATCAAT+AGG + chr7_1:6720846-6720865 Msa1007290:three_prime_UTR 20.0%
! TTTGTGAATTTGTGAGTTTA+GGG - chr7_1:6714280-6714299 None:intergenic 25.0%
!! TGGATTTTTGCTTATAATAG+TGG - chr7_1:6715735-6715754 None:intergenic 25.0%
! TTTATTATAATAGTGACCAG+AGG + chr7_1:6715843-6715862 Msa1007290:intron 25.0%
! TTATTATAATAGTGACCAGA+GGG + chr7_1:6715844-6715863 Msa1007290:intron 25.0%
! CACAAAATATCAGAAAGATT+AGG - chr7_1:6715990-6716009 None:intergenic 25.0%
!! TTGTGATGAACCTTTTTAAT+TGG + chr7_1:6716219-6716238 Msa1007290:intron 25.0%
!!! TGTGATGAACCTTTTTAATT+GGG + chr7_1:6716220-6716239 Msa1007290:intron 25.0%
!! ATTAAGTTGTTTATCCAAAG+TGG - chr7_1:6716345-6716364 None:intergenic 25.0%
! ATAGCAAAGTAGAATTTGAA+CGG + chr7_1:6716699-6716718 Msa1007290:intron 25.0%
! ACATACAACAATTTCTCATT+CGG - chr7_1:6717134-6717153 None:intergenic 25.0%
!!! AAATATCAAGGTTGATAGTT+CGG + chr7_1:6717542-6717561 Msa1007290:CDS 25.0%
!! TTCTCAATGCTTTTAGATTT+CGG + chr7_1:6718076-6718095 Msa1007290:intron 25.0%
!! TTACAACCATTAATTTTTCC+AGG + chr7_1:6718373-6718392 Msa1007290:intron 25.0%
! AGAACGTAAAATAAATGGTT+TGG - chr7_1:6718548-6718567 None:intergenic 25.0%
! ACGTTAGAACGTAAAATAAA+TGG - chr7_1:6718553-6718572 None:intergenic 25.0%
! ACATGTATAGAGAAGAATAT+GGG - chr7_1:6718601-6718620 None:intergenic 25.0%
! AACATGTATAGAGAAGAATA+TGG - chr7_1:6718602-6718621 None:intergenic 25.0%
! TAGATAACAAAAGTCAGTAT+TGG - chr7_1:6718675-6718694 None:intergenic 25.0%
!!! TGAATGGTTTTAAGTAACAT+AGG - chr7_1:6718840-6718859 None:intergenic 25.0%
!!! AGCTATTTTTATAGGTTCTT+GGG - chr7_1:6719181-6719200 None:intergenic 25.0%
!!! AAGCTATTTTTATAGGTTCT+TGG - chr7_1:6719182-6719201 None:intergenic 25.0%
! GAATAAAAAAGCAGTCATTA+AGG - chr7_1:6719206-6719225 None:intergenic 25.0%
!!! TAATGACTGCTTTTTTATTC+CGG + chr7_1:6719206-6719225 Msa1007290:three_prime_UTR 25.0%
! GATTCTAACAGAAATTGTTT+GGG - chr7_1:6719735-6719754 None:intergenic 25.0%
! AGATTCTAACAGAAATTGTT+TGG - chr7_1:6719736-6719755 None:intergenic 25.0%
! ACAATTTCTGTTAGAATCTA+TGG + chr7_1:6719737-6719756 Msa1007290:three_prime_UTR 25.0%
! TGTTAGAATCTATGGATAAT+GGG + chr7_1:6719745-6719764 Msa1007290:three_prime_UTR 25.0%
!!! GTTTTAAATAGCAGCAATAT+CGG + chr7_1:6719884-6719903 Msa1007290:three_prime_UTR 25.0%
!!! GTTTTCTAGTACATTTCTAA+TGG + chr7_1:6720260-6720279 Msa1007290:three_prime_UTR 25.0%
! TTGTATATGTAAGAGATTGA+GGG + chr7_1:6720401-6720420 Msa1007290:three_prime_UTR 25.0%
!! CAATATGCACACATTTTATA+TGG - chr7_1:6720702-6720721 None:intergenic 25.0%
! CATATAAAATGTGTGCATAT+TGG + chr7_1:6720700-6720719 Msa1007290:three_prime_UTR 25.0%
! CAAAATAGTGAGTGTTAAAA+TGG - chr7_1:6720769-6720788 None:intergenic 25.0%
! TTATCATTGATCAATAGGAA+AGG + chr7_1:6720851-6720870 Msa1007290:three_prime_UTR 25.0%
! TATGGTAAATAGTTGAGATT+CGG + chr7_1:6721163-6721182 Msa1007290:three_prime_UTR 25.0%
GTTTGTGAATTTGTGAGTTT+AGG - chr7_1:6714281-6714300 None:intergenic 30.0%
ACAATTCTCACAATTCACAA+TGG + chr7_1:6714301-6714320 Msa1007290:exon 30.0%
!! TCCAATGATTTTGAAGATTC+TGG + chr7_1:6714632-6714651 Msa1007290:CDS 30.0%
ACCAGAATCTTCAAAATCAT+TGG - chr7_1:6714636-6714655 None:intergenic 30.0%
TATTAGAGTTTCTCAGTGTA+TGG + chr7_1:6714799-6714818 Msa1007290:intron 30.0%
ATTAGAGTTTCTCAGTGTAT+GGG + chr7_1:6714800-6714819 Msa1007290:intron 30.0%
GCGTAATTCTTTAAGCTATT+TGG + chr7_1:6714949-6714968 Msa1007290:intron 30.0%
ATAAGTGTTTGTGTCATGTT+TGG + chr7_1:6715359-6715378 Msa1007290:intron 30.0%
TTGTGATCTCTAATGTTATC+AGG + chr7_1:6716005-6716024 Msa1007290:intron 30.0%
AATCTACAGCCCAATTAAAA+AGG - chr7_1:6716232-6716251 None:intergenic 30.0%
ATATTGATCATGATCCACTT+TGG + chr7_1:6716328-6716347 Msa1007290:intron 30.0%
AATGTTGTAAATCCAGATCA+CGG - chr7_1:6716584-6716603 None:intergenic 30.0%
GTATTAAATAGCATCCACAT+GGG - chr7_1:6716730-6716749 None:intergenic 30.0%
!!! AGATTGACAACATTTTTTCC+TGG + chr7_1:6716823-6716842 Msa1007290:intron 30.0%
TACGAAAACAACTTACAGTT+CGG - chr7_1:6716907-6716926 None:intergenic 30.0%
TATAGAGCCTCTATTTGAAT+CGG - chr7_1:6716989-6717008 None:intergenic 30.0%
! CATCTTCAGTTGCAATTTTA+GGG - chr7_1:6717952-6717971 None:intergenic 30.0%
! TCATCTTCAGTTGCAATTTT+AGG - chr7_1:6717953-6717972 None:intergenic 30.0%
!!! TGATGTCTTTTTTGGGAAAT+CGG + chr7_1:6718014-6718033 Msa1007290:intron 30.0%
! TCTCAATGCTTTTAGATTTC+GGG + chr7_1:6718077-6718096 Msa1007290:intron 30.0%
! GAGAGCAAATCTTTTTGATA+AGG + chr7_1:6718148-6718167 Msa1007290:CDS 30.0%
TATTCTTATTCTGATGGCTA+TGG + chr7_1:6718287-6718306 Msa1007290:CDS 30.0%
!!! TGGTTTTAAGTAACATAGGA+AGG - chr7_1:6718836-6718855 None:intergenic 30.0%
TCTGTTAATGCTAATGTGAA+TGG - chr7_1:6718856-6718875 None:intergenic 30.0%
ATGAGCATCAAAATTCTACA+TGG - chr7_1:6718904-6718923 None:intergenic 30.0%
! TTTAGATCTAAAACACCATG+TGG + chr7_1:6719234-6719253 Msa1007290:three_prime_UTR 30.0%
ATCTGACCACTATCTTATAT+TGG + chr7_1:6719482-6719501 Msa1007290:three_prime_UTR 30.0%
GCAAAACCAATATAAGATAG+TGG - chr7_1:6719491-6719510 None:intergenic 30.0%
!! TAGTTGAACTTTTTCCAGTT+CGG + chr7_1:6719527-6719546 Msa1007290:three_prime_UTR 30.0%
!!! CTGGTTTTTTTTTTGAGTGA+AGG + chr7_1:6719623-6719642 Msa1007290:three_prime_UTR 30.0%
! AATTGTTTTCAAAACTGTGC+GGG - chr7_1:6719690-6719709 None:intergenic 30.0%
! GAATTGTTTTCAAAACTGTG+CGG - chr7_1:6719691-6719710 None:intergenic 30.0%
CTGTTAGAATCTATGGATAA+TGG + chr7_1:6719744-6719763 Msa1007290:three_prime_UTR 30.0%
ACAATTTCCGTTAGAATCTA+TGG + chr7_1:6719775-6719794 Msa1007290:three_prime_UTR 30.0%
CCATTATCCATAGATTCTAA+CGG - chr7_1:6719747-6719766 None:intergenic 30.0%
CGTTAGAATCTATGGATAAT+GGG + chr7_1:6719783-6719802 Msa1007290:three_prime_UTR 30.0%
AAAGAATGAGATTTGTATCG+CGG - chr7_1:6719950-6719969 None:intergenic 30.0%
AAAAACAAACAAGCATGGAT+TGG - chr7_1:6720298-6720317 None:intergenic 30.0%
AACTCAAAAACAAACAAGCA+TGG - chr7_1:6720303-6720322 None:intergenic 30.0%
CTCAATCTCTTACATATACA+AGG - chr7_1:6720402-6720421 None:intergenic 30.0%
CTTGTATATGTAAGAGATTG+AGG + chr7_1:6720400-6720419 Msa1007290:three_prime_UTR 30.0%
AAAACAAGCTTAATCCAAAC+AGG - chr7_1:6720427-6720446 None:intergenic 30.0%
ATATTTCATCATTCGATCAC+TGG + chr7_1:6720813-6720832 Msa1007290:three_prime_UTR 30.0%
TATTTCATCATTCGATCACT+GGG + chr7_1:6720814-6720833 Msa1007290:three_prime_UTR 30.0%
TGTTTAACATGGCATTTATG+TGG - chr7_1:6720945-6720964 None:intergenic 30.0%
TATAAGTACAAGAGGTTATG+AGG + chr7_1:6721021-6721040 Msa1007290:three_prime_UTR 30.0%
AAGACTAATATCCAACAGTT+GGG - chr7_1:6721048-6721067 None:intergenic 30.0%
!! ATTAGTCTTGCTCTATGTTT+AGG + chr7_1:6721059-6721078 Msa1007290:three_prime_UTR 30.0%
! ATGGAACTTGTTCAAGTATT+TGG + chr7_1:6721137-6721156 Msa1007290:three_prime_UTR 30.0%
TGTTCAAGTATTTGGAGATA+TGG + chr7_1:6721145-6721164 Msa1007290:three_prime_UTR 30.0%
!!! AGACCTTTTAAGATTGCAAA+AGG + chr7_1:6721283-6721302 Msa1007290:three_prime_UTR 30.0%
! TGACCTTTTGCAATCTTAAA+AGG - chr7_1:6721289-6721308 None:intergenic 30.0%
TAAGATTGCAAAAGGTCATT+TGG + chr7_1:6721291-6721310 Msa1007290:three_prime_UTR 30.0%
GTTATGTGAAATGTGTCTCT+TGG - chr7_1:6714434-6714453 None:intergenic 35.0%
TGAAGATGAAGACGTTGATA+TGG + chr7_1:6714730-6714749 Msa1007290:CDS 35.0%
GGATTATTCAGTGTCATATC+TGG + chr7_1:6714921-6714940 Msa1007290:intron 35.0%
AGAGTTTGGTATTATCGAGT+CGG + chr7_1:6715216-6715235 Msa1007290:intron 35.0%
TTATAATTCACTCACAGACG+CGG - chr7_1:6715388-6715407 None:intergenic 35.0%
GAGATTGTTGAATCTTGTGT+CGG + chr7_1:6715443-6715462 Msa1007290:intron 35.0%
TGCTTATAATAGTGGCCATA+GGG - chr7_1:6715492-6715511 None:intergenic 35.0%
TTGCTTATAATAGTGGCCAT+AGG - chr7_1:6715493-6715512 None:intergenic 35.0%
ACCATCTTTGCTTACAATAG+TGG + chr7_1:6715521-6715540 Msa1007290:intron 35.0%
! ATCAGATTTTATGCCGTGTT+TGG + chr7_1:6715601-6715620 Msa1007290:intron 35.0%
AAATTACTAGTTACACCCTC+TGG - chr7_1:6715862-6715881 None:intergenic 35.0%
TGATCTCTAATGTTATCAGG+TGG + chr7_1:6716008-6716027 Msa1007290:intron 35.0%
GGCAGATTGTTCAGAATATA+AGG + chr7_1:6716103-6716122 Msa1007290:CDS 35.0%
TTAGGATTCTTAAGGATGAC+CGG + chr7_1:6716145-6716164 Msa1007290:CDS 35.0%
TCCTGAATCAATGTTGTCAA+TGG + chr7_1:6716499-6716518 Msa1007290:intron 35.0%
TGAATCAATGTTGTCAATGG+CGG + chr7_1:6716502-6716521 Msa1007290:intron 35.0%
TAAATCCAGATCACGGAAAA+TGG - chr7_1:6716577-6716596 None:intergenic 35.0%
! CTGGATTTACAACATTTTCC+TGG + chr7_1:6716588-6716607 Msa1007290:intron 35.0%
! ACATTTTCCTGGAGAGTTTA+TGG + chr7_1:6716599-6716618 Msa1007290:intron 35.0%
!! GTTGTTTTCATAAGTTGTCC+TGG + chr7_1:6716652-6716671 Msa1007290:intron 35.0%
CGTATTAAATAGCATCCACA+TGG - chr7_1:6716731-6716750 None:intergenic 35.0%
!!! CATTTTTTCCTGGAGAGTTA+TGG + chr7_1:6716833-6716852 Msa1007290:intron 35.0%
ACGAAAACAACTTACAGTTC+GGG - chr7_1:6716906-6716925 None:intergenic 35.0%
CTTCATTTGTGAAACTGTTC+AGG - chr7_1:6716936-6716955 None:intergenic 35.0%
! AAATGAGCCGATTCAAATAG+AGG + chr7_1:6716979-6716998 Msa1007290:intron 35.0%
! TGAGATTGCTGTTGTGAAAA+AGG + chr7_1:6717188-6717207 Msa1007290:CDS 35.0%
TAGCAGTTGGACAAACAAAT+CGG - chr7_1:6717458-6717477 None:intergenic 35.0%
!! ATTGGAGGTGTTATAGGTAA+GGG + chr7_1:6717480-6717499 Msa1007290:CDS 35.0%
AATCAAATTAGGCAGGATTC+TGG + chr7_1:6717516-6717535 Msa1007290:CDS 35.0%
ATCAAATTAGGCAGGATTCT+GGG + chr7_1:6717517-6717536 Msa1007290:CDS 35.0%
TGACTGCTTAATAGCCATTT+CGG + chr7_1:6717578-6717597 Msa1007290:CDS 35.0%
GGGCATAAGAAATGATTGAA+TGG + chr7_1:6717664-6717683 Msa1007290:intron 35.0%
TGTGTTTATGCAGTTCTTTG+AGG + chr7_1:6717715-6717734 Msa1007290:intron 35.0%
GAGAAAGTTGAAAGAGATTC+TGG + chr7_1:6717791-6717810 Msa1007290:CDS 35.0%
! ATTGGTTGCCTTATTGGTAA+AGG + chr7_1:6717857-6717876 Msa1007290:CDS 35.0%
TTGATCCTCCTTTACCAATA+AGG - chr7_1:6717868-6717887 None:intergenic 35.0%
CAATCATTACTGAGATGAGA+AGG + chr7_1:6717885-6717904 Msa1007290:CDS 35.0%
TGCAACTGAAGATGATGAAA+TGG + chr7_1:6717958-6717977 Msa1007290:CDS 35.0%
!!! TGCTTGAGTGATGTCTTTTT+TGG + chr7_1:6718006-6718025 Msa1007290:intron 35.0%
!!! GCTTGAGTGATGTCTTTTTT+GGG + chr7_1:6718007-6718026 Msa1007290:intron 35.0%
! CTCAATGCTTTTAGATTTCG+GGG + chr7_1:6718078-6718097 Msa1007290:intron 35.0%
! TCAATGCTTTTAGATTTCGG+GGG + chr7_1:6718079-6718098 Msa1007290:intron 35.0%
TTCAACTATGAAGGTAGAGA+TGG + chr7_1:6718242-6718261 Msa1007290:CDS 35.0%
TAACTTCCATAAGCTCCATA+AGG - chr7_1:6718494-6718513 None:intergenic 35.0%
AGCTTATGGAAGTTATGCTA+CGG + chr7_1:6718499-6718518 Msa1007290:CDS 35.0%
AACCATGGTTACTAAAACCT+TGG + chr7_1:6718754-6718773 Msa1007290:exon 35.0%
ATGGTTACTAAAACCTTGGT+GGG + chr7_1:6718758-6718777 Msa1007290:exon 35.0%
CAAAATTCTACATGGTACAC+TGG - chr7_1:6718896-6718915 None:intergenic 35.0%
TTCAATAGTCTCCACATGTT+TGG - chr7_1:6719109-6719128 None:intergenic 35.0%
GAAGTAAGGTAAAATGGACA+TGG - chr7_1:6719137-6719156 None:intergenic 35.0%
GCTTAGGAAGTAAGGTAAAA+TGG - chr7_1:6719143-6719162 None:intergenic 35.0%
AGATAGTACAGGTATACAAC+TGG - chr7_1:6719273-6719292 None:intergenic 35.0%
CGACAAAACAAAGATAGTAC+AGG - chr7_1:6719284-6719303 None:intergenic 35.0%
!!! TTTGTTTTGTCGTGTTTTCC+TGG + chr7_1:6719292-6719311 Msa1007290:three_prime_UTR 35.0%
ATTTAACGCACAAGACTGTA+AGG - chr7_1:6719391-6719410 None:intergenic 35.0%
! ACAGTCTTGTGCGTTAAATT+TGG + chr7_1:6719392-6719411 Msa1007290:three_prime_UTR 35.0%
TAAATTTGGAAGACCTTGTG+TGG + chr7_1:6719406-6719425 Msa1007290:three_prime_UTR 35.0%
!! GAATGGACTGAATACAAGAT+TGG + chr7_1:6719570-6719589 Msa1007290:three_prime_UTR 35.0%
!! TGAATACAAGATTGGTTCGT+TGG + chr7_1:6719578-6719597 Msa1007290:three_prime_UTR 35.0%
!! TCGTTGGTGTTTAGTTTGAA+TGG + chr7_1:6719594-6719613 Msa1007290:three_prime_UTR 35.0%
!! CGTTGGTGTTTAGTTTGAAT+GGG + chr7_1:6719595-6719614 Msa1007290:three_prime_UTR 35.0%
!! CAGAAATTGTTTGGGTTGTT+TGG - chr7_1:6719727-6719746 None:intergenic 35.0%
CCGTTAGAATCTATGGATAA+TGG + chr7_1:6719782-6719801 Msa1007290:three_prime_UTR 35.0%
! GCTATTTAAAACAACTGCTC+TGG - chr7_1:6719876-6719895 None:intergenic 35.0%
! GCTTTAAATAGCAGCGATAT+CGG + chr7_1:6719995-6720014 Msa1007290:intron 35.0%
AATGAAACTAAACACCGAAC+TGG + chr7_1:6720226-6720245 Msa1007290:three_prime_UTR 35.0%
!!! GTTTTTGAGTTCTACCTTTG+AGG + chr7_1:6720312-6720331 Msa1007290:three_prime_UTR 35.0%
CATGTCACATCATAAACTCA+GGG - chr7_1:6720630-6720649 None:intergenic 35.0%
ACATGTCACATCATAAACTC+AGG - chr7_1:6720631-6720650 None:intergenic 35.0%
ATTAAATGAACTAGCCCTAG+AGG - chr7_1:6720731-6720750 None:intergenic 35.0%
ATTGATCAATAGGAAAGGCT+AGG + chr7_1:6720856-6720875 Msa1007290:three_prime_UTR 35.0%
!! ACAAATGGTGCTGTTTAACA+TGG - chr7_1:6720956-6720975 None:intergenic 35.0%
GTTAGTCGTATAAGTACAAG+AGG + chr7_1:6721013-6721032 Msa1007290:three_prime_UTR 35.0%
CAAGACTAATATCCAACAGT+TGG - chr7_1:6721049-6721068 None:intergenic 35.0%
!! TTGCTCTATGTTTAGGTTGT+TGG + chr7_1:6721066-6721085 Msa1007290:three_prime_UTR 35.0%
TAATCCAAGGAATCTCAAAG+TGG - chr7_1:6721118-6721137 None:intergenic 35.0%
!! CTTTGAGATTCCTTGGATTA+TGG + chr7_1:6721118-6721137 Msa1007290:three_prime_UTR 35.0%
TGAACAAGTTCCATAATCCA+AGG - chr7_1:6721131-6721150 None:intergenic 35.0%
CAATGTTCATTGAATGCAGT+TGG + chr7_1:6721224-6721243 Msa1007290:three_prime_UTR 35.0%
GAATGAGACAGGTAATCTAT+TGG + chr7_1:6721257-6721276 Msa1007290:three_prime_UTR 35.0%
TTCTCACAATTCACAATGGC+TGG + chr7_1:6714305-6714324 Msa1007290:exon 40.0%
! TTGTGATGAGCGTGTTGTTA+CGG + chr7_1:6714589-6714608 Msa1007290:CDS 40.0%
TGAGTTTATGTGTCCTGCTA+TGG + chr7_1:6714655-6714674 Msa1007290:CDS 40.0%
TGAAGACGTTGATATGGAGA+AGG + chr7_1:6714736-6714755 Msa1007290:CDS 40.0%
GGATTATTGTCTGTGTGATG+AGG + chr7_1:6714970-6714989 Msa1007290:intron 40.0%
TTATTGTCTGTGTGATGAGG+AGG + chr7_1:6714973-6714992 Msa1007290:intron 40.0%
CCAAACTCTGTTGTCAATAG+CGG - chr7_1:6715205-6715224 None:intergenic 40.0%
GAGTTTGGTATTATCGAGTC+GGG + chr7_1:6715217-6715236 Msa1007290:intron 40.0%
GCCACTATTGTAAGCAAAGA+TGG - chr7_1:6715525-6715544 None:intergenic 40.0%
TTGCTTACAATAGTGGCTGT+AGG + chr7_1:6715528-6715547 Msa1007290:intron 40.0%
TGCTTACAATAGTGGCTGTA+GGG + chr7_1:6715529-6715548 Msa1007290:intron 40.0%
ACAGACATGAACACCAAACA+CGG - chr7_1:6715617-6715636 None:intergenic 40.0%
TTGCTTATAATAGTGGCCGT+AGG - chr7_1:6715728-6715747 None:intergenic 40.0%
CTCTAATGTTATCAGGTGGA+TGG + chr7_1:6716012-6716031 Msa1007290:intron 40.0%
TAATGTTATCAGGTGGATGG+AGG + chr7_1:6716015-6716034 Msa1007290:intron 40.0%
AATGTTATCAGGTGGATGGA+GGG + chr7_1:6716016-6716035 Msa1007290:intron 40.0%
ATCAGATTGGGTGTGTGATT+GGG + chr7_1:6716073-6716092 Msa1007290:intron 40.0%
CAGAATATAAGGAGTGAGAC+TGG + chr7_1:6716114-6716133 Msa1007290:CDS 40.0%
TGCGCAGATTAGGATTCTTA+AGG + chr7_1:6716137-6716156 Msa1007290:CDS 40.0%
!! GCCATTGACAACATTGATTC+AGG - chr7_1:6716503-6716522 None:intergenic 40.0%
CTTACTTCCATAAACTCTCC+AGG - chr7_1:6716609-6716628 None:intergenic 40.0%
!! TACGAAGTGTTGTCAAACAG+TGG + chr7_1:6716747-6716766 Msa1007290:intron 40.0%
! AAACCACCATTTTCCATGAG+TGG + chr7_1:6716776-6716795 Msa1007290:intron 40.0%
GTTCAACCACTCATGGAAAA+TGG - chr7_1:6716785-6716804 None:intergenic 40.0%
!! GTTGAACAAACCGCCATTTT+GGG + chr7_1:6716798-6716817 Msa1007290:intron 40.0%
GTTGTCAATCTCACCCAAAA+TGG - chr7_1:6716814-6716833 None:intergenic 40.0%
ACTTACTTCCATAACTCTCC+AGG - chr7_1:6716844-6716863 None:intergenic 40.0%
! TGTGAAAAAGGCTCTGATTC+AGG + chr7_1:6717200-6717219 Msa1007290:CDS 40.0%
GCAAATGTTGAGTACGTGAA+GGG - chr7_1:6717248-6717267 None:intergenic 40.0%
AGCAAATGTTGAGTACGTGA+AGG - chr7_1:6717249-6717268 None:intergenic 40.0%
AATCGGACTGAAAACTCCAT+CGG - chr7_1:6717441-6717460 None:intergenic 40.0%
GTTTGTCCAACTGCTAACAT+TGG + chr7_1:6717462-6717481 Msa1007290:CDS 40.0%
!! GCTAACATTGGAGGTGTTAT+AGG + chr7_1:6717474-6717493 Msa1007290:CDS 40.0%
!! CATTGGAGGTGTTATAGGTA+AGG + chr7_1:6717479-6717498 Msa1007290:CDS 40.0%
TCAAATTAGGCAGGATTCTG+GGG + chr7_1:6717518-6717537 Msa1007290:CDS 40.0%
TTTCAACTTTCTCACTGCAC+CGG - chr7_1:6717784-6717803 None:intergenic 40.0%
GTATTCTCTCTTTCACTAGC+CGG + chr7_1:6717813-6717832 Msa1007290:CDS 40.0%
TCTCGAATTGGTTGCCTTAT+TGG + chr7_1:6717851-6717870 Msa1007290:CDS 40.0%
TAACATCCGCATCCTATCTA+AGG + chr7_1:6717919-6717938 Msa1007290:CDS 40.0%
TGAAGATGATGAAATGGTGC+AGG + chr7_1:6717964-6717983 Msa1007290:CDS 40.0%
! AAAAAGATTTGCTCTCAGCC+GGG - chr7_1:6718144-6718163 None:intergenic 40.0%
! CAAAAAGATTTGCTCTCAGC+CGG - chr7_1:6718145-6718164 None:intergenic 40.0%
CCTTCATAGTTGAAACCATC+TGG - chr7_1:6718236-6718255 None:intergenic 40.0%
CCAGATGGTTTCAACTATGA+AGG + chr7_1:6718233-6718252 Msa1007290:CDS 40.0%
GGTGGCTATTCTTATTCTGA+TGG + chr7_1:6718281-6718300 Msa1007290:CDS 40.0%
TCTTATTCTGATGGCTATGG+AGG + chr7_1:6718290-6718309 Msa1007290:CDS 40.0%
TGGAAACTATGGAAGTTCAC+AGG + chr7_1:6718343-6718362 Msa1007290:CDS 40.0%
CTCATCTGCACTTAAAATCC+TGG - chr7_1:6718394-6718413 None:intergenic 40.0%
ATGGAAGTTATGCTACGGAA+CGG + chr7_1:6718504-6718523 Msa1007290:CDS 40.0%
GGACAATCTATCAGACAATC+TGG - chr7_1:6718701-6718720 None:intergenic 40.0%
!! CACCAAGGTTTTAGTAACCA+TGG - chr7_1:6718759-6718778 None:intergenic 40.0%
CATGGTTACTAAAACCTTGG+TGG + chr7_1:6718757-6718776 Msa1007290:exon 40.0%
GAAGCTAAAATCTACCTGCA+GGG - chr7_1:6718785-6718804 None:intergenic 40.0%
ATAACTCAGCTGTTTGGATG+GGG - chr7_1:6718952-6718971 None:intergenic 40.0%
CATAACTCAGCTGTTTGGAT+GGG - chr7_1:6718953-6718972 None:intergenic 40.0%
ACATAACTCAGCTGTTTGGA+TGG - chr7_1:6718954-6718973 None:intergenic 40.0%
CTTCACATAACTCAGCTGTT+TGG - chr7_1:6718958-6718977 None:intergenic 40.0%
TTCATCTCGTCTTCCAGTTT+AGG - chr7_1:6718996-6719015 None:intergenic 40.0%
CCATGAATTTGTCAGTCACT+GGG - chr7_1:6719059-6719078 None:intergenic 40.0%
AACCTTGATGCCTCTATCTA+GGG + chr7_1:6719081-6719100 Msa1007290:three_prime_UTR 40.0%
TACAGGTATACAACTGGCAA+AGG - chr7_1:6719267-6719286 None:intergenic 40.0%
GCAAGTAACTATGAACTACC+AGG - chr7_1:6719313-6719332 None:intergenic 40.0%
CATTCAGCTCATATAACCAG+AGG - chr7_1:6719555-6719574 None:intergenic 40.0%
CTCTGGTTATATGAGCTGAA+TGG + chr7_1:6719553-6719572 Msa1007290:three_prime_UTR 40.0%
!! TTAGTTTGAATGGGCTAGTC+TGG + chr7_1:6719604-6719623 Msa1007290:three_prime_UTR 40.0%
! GCTATTTAAAGCAACTGCTC+TGG - chr7_1:6719987-6720006 None:intergenic 40.0%
CTCTACACAACAATGCTGTA+AGG - chr7_1:6720111-6720130 None:intergenic 40.0%
CTTACAGCATTGTTGTGTAG+AGG + chr7_1:6720109-6720128 Msa1007290:three_prime_UTR 40.0%
TGGATCAGTGTTGTCAATTG+CGG - chr7_1:6720163-6720182 None:intergenic 40.0%
AACTATACACCACACCAGTT+CGG - chr7_1:6720243-6720262 None:intergenic 40.0%
!! AACAAGCATGGATTGGAAGT+TGG - chr7_1:6720291-6720310 None:intergenic 40.0%
AAATGGCAACGCTAGCTAAA+TGG - chr7_1:6720673-6720692 None:intergenic 40.0%
TGCATATTGGATTGTCCTCT+AGG + chr7_1:6720713-6720732 Msa1007290:three_prime_UTR 40.0%
GCATATTGGATTGTCCTCTA+GGG + chr7_1:6720714-6720733 Msa1007290:three_prime_UTR 40.0%
ACGTGTTCAGAAGACAGATA+AGG - chr7_1:6720995-6721014 None:intergenic 40.0%
AATGAACATTGCAGACCAAG+GGG - chr7_1:6721215-6721234 None:intergenic 40.0%
CAATGAACATTGCAGACCAA+GGG - chr7_1:6721216-6721235 None:intergenic 40.0%
TCAATGAACATTGCAGACCA+AGG - chr7_1:6721217-6721236 None:intergenic 40.0%
GAATGCAGTTGGATTTCTTC+TGG + chr7_1:6721235-6721254 Msa1007290:three_prime_UTR 40.0%
!! GATTTCTTCTGGAATGAGAC+AGG + chr7_1:6721246-6721265 Msa1007290:three_prime_UTR 40.0%
GCTGGTCAAAGAACATCCTA+CGG + chr7_1:6714323-6714342 Msa1007290:CDS 45.0%
!! TTTCGTCGGTGTTAGGGTTA+CGG - chr7_1:6714406-6714425 None:intergenic 45.0%
!! GAGTAGTTTCGTCGGTGTTA+GGG - chr7_1:6714412-6714431 None:intergenic 45.0%
GTCTCTTGGAGTAGTTTCGT+CGG - chr7_1:6714420-6714439 None:intergenic 45.0%
! CGGACAAAGGTAACGGTAAA+CGG - chr7_1:6714468-6714487 None:intergenic 45.0%
CGTTTACCGTTACCTTTGTC+CGG + chr7_1:6714466-6714485 Msa1007290:CDS 45.0%
! CTTTGTCCGGTTCGCAAAAT+CGG + chr7_1:6714479-6714498 Msa1007290:CDS 45.0%
ACAACTCCGTCTTGATACGA+AGG + chr7_1:6714535-6714554 Msa1007290:CDS 45.0%
TCTTCGCCTTCGTATCAAGA+CGG - chr7_1:6714544-6714563 None:intergenic 45.0%
ACGAAGGCGAAGATTCGAAT+CGG + chr7_1:6714551-6714570 Msa1007290:CDS 45.0%
ACTTGTCAGGATCCATCAGA+AGG + chr7_1:6714682-6714701 Msa1007290:CDS 45.0%
! CTCAGTGTATGGGTTGTGTT+TGG + chr7_1:6714810-6714829 Msa1007290:intron 45.0%
GGATGACGTTGATATGTCGA+AGG + chr7_1:6714994-6715013 Msa1007290:intron 45.0%
TGACGTTGATATGTCGAAGG+TGG + chr7_1:6714997-6715016 Msa1007290:intron 45.0%
TTTGGAGAAAGCGGATGAAG+CGG - chr7_1:6715114-6715133 None:intergenic 45.0%
CCGCTATTGACAACAGAGTT+TGG + chr7_1:6715202-6715221 Msa1007290:intron 45.0%
!! TGAATCAGTGCTGACGTGTT+CGG + chr7_1:6715268-6715287 Msa1007290:intron 45.0%
! TCTTGTGTCGGTGTTTGTGA+CGG + chr7_1:6715455-6715474 Msa1007290:intron 45.0%
TCTGCTGTCTGTGTCTGTAA+CGG + chr7_1:6715690-6715709 Msa1007290:intron 45.0%
ACGGTGGTTCATACATCCTA+CGG + chr7_1:6715709-6715728 Msa1007290:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr7_1:6715921-6715940 Msa1007290:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr7_1:6715922-6715941 Msa1007290:intron 45.0%
ATGTTATCAGGTGGATGGAG+GGG + chr7_1:6716017-6716036 Msa1007290:intron 45.0%
TTGTGGCGTCTGATCAGATT+GGG + chr7_1:6716061-6716080 Msa1007290:intron 45.0%
GATCAGATTGGGTGTGTGAT+TGG + chr7_1:6716072-6716091 Msa1007290:intron 45.0%
ATTGGGTGTGTGATTGGGAA+AGG + chr7_1:6716078-6716097 Msa1007290:CDS 45.0%
TCAGAGTTCAAAGCGCAAAG+CGG - chr7_1:6716174-6716193 None:intergenic 45.0%
!!! AACTGCCATTTTCCGTGATC+TGG + chr7_1:6716569-6716588 Msa1007290:intron 45.0%
!! TTTGAACGGATTGTCCCATG+TGG + chr7_1:6716713-6716732 Msa1007290:intron 45.0%
CAACCACTCATGGAAAATGG+TGG - chr7_1:6716782-6716801 None:intergenic 45.0%
! GGTTGAACAAACCGCCATTT+TGG + chr7_1:6716797-6716816 Msa1007290:intron 45.0%
GTCAATCTCACCCAAAATGG+CGG - chr7_1:6716811-6716830 None:intergenic 45.0%
!! AAAGGCTCTGATTCAGGTTG+CGG + chr7_1:6717206-6717225 Msa1007290:CDS 45.0%
TTGCTTACTTCTGCAGTTCC+TGG + chr7_1:6717264-6717283 Msa1007290:CDS 45.0%
TGCTTACTTCTGCAGTTCCT+GGG + chr7_1:6717265-6717284 Msa1007290:CDS 45.0%
ATCGGAGCCATTCCCATAAT+TGG - chr7_1:6717336-6717355 None:intergenic 45.0%
ATTATGGGAATGGCTCCGAT+TGG + chr7_1:6717336-6717355 Msa1007290:CDS 45.0%
GTGATGTTGGAGACTATCCA+CGG + chr7_1:6717382-6717401 Msa1007290:CDS 45.0%
TGTCCAACTGCTAACATTGG+AGG + chr7_1:6717465-6717484 Msa1007290:CDS 45.0%
ACACCTCCAATGTTAGCAGT+TGG - chr7_1:6717471-6717490 None:intergenic 45.0%
!! GGATTCTGGGGCAAATATCA+AGG + chr7_1:6717530-6717549 Msa1007290:CDS 45.0%
!! GTTGATAGTTCGGCAACTGA+AGG + chr7_1:6717552-6717571 Msa1007290:CDS 45.0%
CACAGCTGCTTCAATTGTTG+CGG - chr7_1:6717750-6717769 None:intergenic 45.0%
TTCAACTTTCTCACTGCACC+GGG - chr7_1:6717783-6717802 None:intergenic 45.0%
! GGTTGCCTTATTGGTAAAGG+AGG + chr7_1:6717860-6717879 Msa1007290:CDS 45.0%
GATCCTCCTTAGATAGGATG+CGG - chr7_1:6717928-6717947 None:intergenic 45.0%
TAGGGAGATCCTCCTTAGAT+AGG - chr7_1:6717934-6717953 None:intergenic 45.0%
ATGATGAAATGGTGCAGGTG+AGG + chr7_1:6717969-6717988 Msa1007290:intron 45.0%
CTCTTGTGCAAGTACTTACC+CGG + chr7_1:6718123-6718142 Msa1007290:CDS 45.0%
!! GGAAGATATGCAAGTACTGG+TGG - chr7_1:6718197-6718216 None:intergenic 45.0%
GCAGGAAGATATGCAAGTAC+TGG - chr7_1:6718200-6718219 None:intergenic 45.0%
TTGAAACCATCTGGTCCTTC+TGG - chr7_1:6718227-6718246 None:intergenic 45.0%
! GGCTCAAGTGATTTTGCATC+TGG + chr7_1:6718311-6718330 Msa1007290:CDS 45.0%
! AGTGATTTTGCATCTGGCGA+CGG + chr7_1:6718317-6718336 Msa1007290:CDS 45.0%
TTGTTTCATATGCGGCAGCT+TGG + chr7_1:6718458-6718477 Msa1007290:intron 45.0%
AGATTGTCCGACAGATTGTC+TGG + chr7_1:6718712-6718731 Msa1007290:CDS 45.0%
AACACCACCAGACAATCTGT+CGG - chr7_1:6718722-6718741 None:intergenic 45.0%
! GATTGTCTGGTGGTGTTTCT+CGG + chr7_1:6718725-6718744 Msa1007290:CDS 45.0%
GGAAGCTAAAATCTACCTGC+AGG - chr7_1:6718786-6718805 None:intergenic 45.0%
TTCTACATGGTACACTGGTC+AGG - chr7_1:6718891-6718910 None:intergenic 45.0%
AGTTTAGGCAGTAGGCTTCA+GGG - chr7_1:6718981-6719000 None:intergenic 45.0%
GCAGTGAGTTTGTCAAACCA+TGG - chr7_1:6719019-6719038 None:intergenic 45.0%
ATTTGTCAGTCACTGGGTAG+AGG - chr7_1:6719053-6719072 None:intergenic 45.0%
CCCAGTGACTGACAAATTCA+TGG + chr7_1:6719056-6719075 Msa1007290:three_prime_UTR 45.0%
GCCATGAATTTGTCAGTCAC+TGG - chr7_1:6719060-6719079 None:intergenic 45.0%
!! CTAGATAGAGGCATCAAGGT+TGG - chr7_1:6719082-6719101 None:intergenic 45.0%
CAACCTTGATGCCTCTATCT+AGG + chr7_1:6719080-6719099 Msa1007290:three_prime_UTR 45.0%
ACCTTGATGCCTCTATCTAG+GGG + chr7_1:6719082-6719101 Msa1007290:three_prime_UTR 45.0%
ATGTTTGGTCCCCTAGATAG+AGG - chr7_1:6719094-6719113 None:intergenic 45.0%
TATCTAGGGGACCAAACATG+TGG + chr7_1:6719095-6719114 Msa1007290:three_prime_UTR 45.0%
GTTCGCAAGCTTAGGAAGTA+AGG - chr7_1:6719151-6719170 None:intergenic 45.0%
ACTGCAATACAGACCACACA+AGG - chr7_1:6719422-6719441 None:intergenic 45.0%
! GCTATAGTGCTATTGCCTAG+CGG + chr7_1:6720019-6720038 Msa1007290:intron 45.0%
! ACAAGAGTGATTTGTCCGCT+AGG - chr7_1:6720037-6720056 None:intergenic 45.0%
!! ATTGCGGATAGCGGAAATAG+CGG - chr7_1:6720147-6720166 None:intergenic 45.0%
GTGTTGTCAATTGCGGATAG+CGG - chr7_1:6720156-6720175 None:intergenic 45.0%
ACAACACTGATCCAGAGCTA+AGG + chr7_1:6720169-6720188 Msa1007290:three_prime_UTR 45.0%
AACATCATAGTCGTCCAGGA+TGG - chr7_1:6720203-6720222 None:intergenic 45.0%
TCCTGGACGACTATGATGTT+AGG + chr7_1:6720203-6720222 Msa1007290:three_prime_UTR 45.0%
TCCTAACATCATAGTCGTCC+AGG - chr7_1:6720207-6720226 None:intergenic 45.0%
AACTAAACACCGAACTGGTG+TGG + chr7_1:6720231-6720250 Msa1007290:three_prime_UTR 45.0%
!! TCTACCTTTGAGGTCTAGCA+CGG + chr7_1:6720322-6720341 Msa1007290:three_prime_UTR 45.0%
ACGGCTTAGCCACTAGTTAA+GGG + chr7_1:6720341-6720360 Msa1007290:three_prime_UTR 45.0%
CAGATGCAACCCTTAACTAG+TGG - chr7_1:6720353-6720372 None:intergenic 45.0%
ATCTGTCGTCGATCTACTGT+AGG + chr7_1:6720368-6720387 Msa1007290:three_prime_UTR 45.0%
TAAGAGATTGAGGGCCTGTT+TGG + chr7_1:6720410-6720429 Msa1007290:three_prime_UTR 45.0%
TCATAAACTCAGGGTCCGTT+TGG - chr7_1:6720621-6720640 None:intergenic 45.0%
CATCATTCGATCACTGGGAA+AGG + chr7_1:6720819-6720838 Msa1007290:three_prime_UTR 45.0%
!! CATGCCACTTTGAGATTCCT+TGG + chr7_1:6721111-6721130 Msa1007290:three_prime_UTR 45.0%
!!! TATTATTTATAAATTTGTTA+AGG - chr7_1:6720540-6720559 None:intergenic 5.0%
! GTGTGAACGTTTGTTGCCGT+AGG - chr7_1:6714342-6714361 None:intergenic 50.0%
!! AGGGTTACGGCGTTTGTTGT+TGG - chr7_1:6714393-6714412 None:intergenic 50.0%
! GGAGTAGTTTCGTCGGTGTT+AGG - chr7_1:6714413-6714432 None:intergenic 50.0%
!! ACGGTAAACGGTGTCGTCTT+GGG - chr7_1:6714456-6714475 None:intergenic 50.0%
!! AACGGTAAACGGTGTCGTCT+TGG - chr7_1:6714457-6714476 None:intergenic 50.0%
TGCGAACCGGACAAAGGTAA+CGG - chr7_1:6714475-6714494 None:intergenic 50.0%
! CGATTTTGCGAACCGGACAA+AGG - chr7_1:6714481-6714500 None:intergenic 50.0%
!!! ATGCTGCCGATTTTGCGAAC+CGG - chr7_1:6714488-6714507 None:intergenic 50.0%
CGCAAAATCGGCAGCATCAT+TGG + chr7_1:6714491-6714510 Msa1007290:CDS 50.0%
CGAATCGGTGAAACTGTTCC+TGG + chr7_1:6714566-6714585 Msa1007290:CDS 50.0%
ACAACACGCTCATCACAACC+AGG - chr7_1:6714587-6714606 None:intergenic 50.0%
CTGACAAGTGCATCCATAGC+AGG - chr7_1:6714671-6714690 None:intergenic 50.0%
CTGCTATGGATGCACTTGTC+AGG + chr7_1:6714669-6714688 Msa1007290:CDS 50.0%
CCTCAGCAATCACCTTCTGA+TGG - chr7_1:6714697-6714716 None:intergenic 50.0%
CCATCAGAAGGTGATTGCTG+AGG + chr7_1:6714694-6714713 Msa1007290:CDS 50.0%
GTGATTGCTGAGGATTTGCG+TGG + chr7_1:6714704-6714723 Msa1007290:CDS 50.0%
ATTGCTGAGGATTTGCGTGG+TGG + chr7_1:6714707-6714726 Msa1007290:CDS 50.0%
! TTGGTGTCCGTGTTTGTGTC+TGG + chr7_1:6714829-6714848 Msa1007290:intron 50.0%
TGGTGTCCGTGTTTGTGTCT+GGG + chr7_1:6714830-6714849 Msa1007290:intron 50.0%
TTGGAGAAAGCGGATGAAGC+GGG - chr7_1:6715113-6715132 None:intergenic 50.0%
TTTCTCCAAATGCTCCGCGT+TGG + chr7_1:6715124-6715143 Msa1007290:intron 50.0%
!!! GCGTCGCGCTTTGTTGTTTT+TGG + chr7_1:6715153-6715172 Msa1007290:intron 50.0%
TTGTCAATAGCGGCCGAATG+CGG - chr7_1:6715195-6715214 None:intergenic 50.0%
ACGGTGATTCGTACACCCTA+TGG + chr7_1:6715474-6715493 Msa1007290:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr7_1:6715923-6715942 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr7_1:6715920-6715939 Msa1007290:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr7_1:6715926-6715945 Msa1007290:intron 50.0%
AATAGCCGACCCCACTTAGT+GGG - chr7_1:6715934-6715953 None:intergenic 50.0%
AAATAGCCGACCCCACTTAG+TGG - chr7_1:6715935-6715954 None:intergenic 50.0%
! GGATGGAGGGGATTTGGTTA+CGG + chr7_1:6716029-6716048 Msa1007290:intron 50.0%
GGTTACGGCGAAATTGCTTG+TGG + chr7_1:6716044-6716063 Msa1007290:intron 50.0%
CTTGTGGCGTCTGATCAGAT+TGG + chr7_1:6716060-6716079 Msa1007290:intron 50.0%
GGTGTGTGATTGGGAAAGGT+GGG + chr7_1:6716082-6716101 Msa1007290:CDS 50.0%
! GAACTCTGACGAGCTTGTTC+AGG + chr7_1:6716185-6716204 Msa1007290:CDS 50.0%
GTTGTCAATGGCGGCTATTG+CGG + chr7_1:6716511-6716530 Msa1007290:intron 50.0%
GCTTGACAACACTAAGCTCC+AGG - chr7_1:6716673-6716692 None:intergenic 50.0%
! GCGGTTTGTTCAACCACTCA+TGG - chr7_1:6716792-6716811 None:intergenic 50.0%
TCGCTGAATCTGCAGATCTC+TGG + chr7_1:6717165-6717184 Msa1007290:intron 50.0%
GCTTACTTCTGCAGTTCCTG+GGG + chr7_1:6717266-6717285 Msa1007290:CDS 50.0%
AGAACCCACCATTGAACCAC+CGG - chr7_1:6717301-6717320 None:intergenic 50.0%
!! GGTTCAATGGTGGGTTCTCA+TGG + chr7_1:6717303-6717322 Msa1007290:CDS 50.0%
!! TCAATGGTGGGTTCTCATGG+TGG + chr7_1:6717306-6717325 Msa1007290:CDS 50.0%
!! CAATGGTGGGTTCTCATGGT+GGG + chr7_1:6717307-6717326 Msa1007290:CDS 50.0%
!! AATGGTGGGTTCTCATGGTG+GGG + chr7_1:6717308-6717327 Msa1007290:CDS 50.0%
! TCATGGTGGGGCTCCAATTA+TGG + chr7_1:6717320-6717339 Msa1007290:CDS 50.0%
! CATGGTGGGGCTCCAATTAT+GGG + chr7_1:6717321-6717340 Msa1007290:CDS 50.0%
TGGGGCTCCAATTATGGGAA+TGG + chr7_1:6717326-6717345 Msa1007290:CDS 50.0%
!! CTCCGATTGGTGGTGGTTAT+GGG + chr7_1:6717349-6717368 Msa1007290:CDS 50.0%
!! TCCGATTGGTGGTGGTTATG+GGG + chr7_1:6717350-6717369 Msa1007290:CDS 50.0%
! GGTGGTTATGGGGGGTATAA+AGG + chr7_1:6717360-6717379 Msa1007290:CDS 50.0%
! GGGGGGTATAAAGGTGATGT+TGG + chr7_1:6717369-6717388 Msa1007290:CDS 50.0%
CTATCCACGGTCCATGTATC+CGG + chr7_1:6717395-6717414 Msa1007290:CDS 50.0%
TATCCACGGTCCATGTATCC+GGG + chr7_1:6717396-6717415 Msa1007290:CDS 50.0%
AAGGGATGAAGGTTCTCCGA+TGG + chr7_1:6717422-6717441 Msa1007290:CDS 50.0%
!! GGAGGTGTTATAGGTAAGGG+CGG + chr7_1:6717483-6717502 Msa1007290:CDS 50.0%
AATAGCCATTTCGGCGAGAG+AGG + chr7_1:6717587-6717606 Msa1007290:CDS 50.0%
TTCTACCTCTCTCGCCGAAA+TGG - chr7_1:6717595-6717614 None:intergenic 50.0%
TCAACTTTCTCACTGCACCG+GGG - chr7_1:6717782-6717801 None:intergenic 50.0%
CTCTTTCACTAGCCGGTTAC+TGG + chr7_1:6717820-6717839 Msa1007290:CDS 50.0%
GAGAGCTTGACACCAGTAAC+CGG - chr7_1:6717835-6717854 None:intergenic 50.0%
! CTGGTGTCAAGCTCTCGAAT+TGG + chr7_1:6717839-6717858 Msa1007290:CDS 50.0%
CATCCGCATCCTATCTAAGG+AGG + chr7_1:6717922-6717941 Msa1007290:CDS 50.0%
GGGGGAACTAGATATTGCCA+AGG + chr7_1:6718097-6718116 Msa1007290:CDS 50.0%
!! TACTTGCACAAGAGCGTCCT+TGG - chr7_1:6718117-6718136 None:intergenic 50.0%
TATCTTCCTGCTTCGCCAGA+AGG + chr7_1:6718209-6718228 Msa1007290:CDS 50.0%
GGTAGAGATGGAAGACGACA+TGG + chr7_1:6718254-6718273 Msa1007290:CDS 50.0%
TTTGCATCTGGCGACGGTTA+TGG + chr7_1:6718323-6718342 Msa1007290:CDS 50.0%
GGCGACGGTTATGGAAACTA+TGG + chr7_1:6718332-6718351 Msa1007290:CDS 50.0%
GGTGGTCCTTATGGAGCTTA+TGG + chr7_1:6718485-6718504 Msa1007290:CDS 50.0%
!! ACGGAACGGACTAGTACTTC+TGG + chr7_1:6718518-6718537 Msa1007290:CDS 50.0%
!! CGGAACGGACTAGTACTTCT+GGG + chr7_1:6718519-6718538 Msa1007290:CDS 50.0%
TTGTCCGACAGATTGTCTGG+TGG + chr7_1:6718715-6718734 Msa1007290:CDS 50.0%
GTTTCTCGGAGGAGAAACCA+TGG + chr7_1:6718739-6718758 Msa1007290:CDS 50.0%
GGGAAGGGAAAGGCAACAAA+GGG - chr7_1:6718932-6718951 None:intergenic 50.0%
TGTTTGGATGGGGAAGGGAA+AGG - chr7_1:6718942-6718961 None:intergenic 50.0%
TCAGCTGTTTGGATGGGGAA+GGG - chr7_1:6718947-6718966 None:intergenic 50.0%
CAGTTTAGGCAGTAGGCTTC+AGG - chr7_1:6718982-6719001 None:intergenic 50.0%
CTGAAGCCTACTGCCTAAAC+TGG + chr7_1:6718980-6718999 Msa1007290:three_prime_UTR 50.0%
CGTCTTCCAGTTTAGGCAGT+AGG - chr7_1:6718989-6719008 None:intergenic 50.0%
CTGGAAGACGAGATGAACCA+TGG + chr7_1:6718999-6719018 Msa1007290:three_prime_UTR 50.0%
!! TCCCCTAGATAGAGGCATCA+AGG - chr7_1:6719086-6719105 None:intergenic 50.0%
GAGCACATGTTCGCAAGCTT+AGG - chr7_1:6719159-6719178 None:intergenic 50.0%
GGCAAAGGAACATAGCCACA+TGG - chr7_1:6719252-6719271 None:intergenic 50.0%
! TTTTTCCAGTTCGGCTCCTC+TGG + chr7_1:6719536-6719555 Msa1007290:three_prime_UTR 50.0%
TATAACCAGAGGAGCCGAAC+TGG - chr7_1:6719544-6719563 None:intergenic 50.0%
GCAATAGCGCTATTGCCTAG+CGG + chr7_1:6719908-6719927 Msa1007290:three_prime_UTR 50.0%
ACAAGAGCGATTTGTCCGCT+AGG - chr7_1:6719926-6719945 None:intergenic 50.0%
! TGGCTTTACAGCCTTAGCTC+TGG - chr7_1:6720183-6720202 None:intergenic 50.0%
CTAAGGCTGTAAAGCCATCC+TGG + chr7_1:6720186-6720205 Msa1007290:three_prime_UTR 50.0%
TAAGCCGTGCTAGACCTCAA+AGG - chr7_1:6720329-6720348 None:intergenic 50.0%
CACGGCTTAGCCACTAGTTA+AGG + chr7_1:6720340-6720359 Msa1007290:three_prime_UTR 50.0%
TTCGATCACTGGGAAAGGCT+AGG + chr7_1:6720824-6720843 Msa1007290:three_prime_UTR 50.0%
GGTTATGAGGACCCAACTGT+TGG + chr7_1:6721034-6721053 Msa1007290:three_prime_UTR 50.0%
!!! CTGTTTTTGTCCTCTCCCCT+TGG + chr7_1:6721197-6721216 Msa1007290:three_prime_UTR 50.0%
! CGCGGAGCATTTGGAGAAAG+CGG - chr7_1:6715123-6715142 None:intergenic 55.0%
GCTGTCTGTGTCTGTAACGG+TGG + chr7_1:6715693-6715712 Msa1007290:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr7_1:6715928-6715947 None:intergenic 55.0%
TCAGGTGGATGGAGGGGATT+TGG + chr7_1:6716023-6716042 Msa1007290:intron 55.0%
GGGTGTGTGATTGGGAAAGG+TGG + chr7_1:6716081-6716100 Msa1007290:CDS 55.0%
GTGAGACTGGTGCGCAGATT+AGG + chr7_1:6716127-6716146 Msa1007290:CDS 55.0%
!! CTCTGATTCAGGTTGCGGCA+CGG + chr7_1:6717211-6717230 Msa1007290:CDS 55.0%
TGCAGTTCCTGGGGTGTATG+CGG + chr7_1:6717275-6717294 Msa1007290:CDS 55.0%
ATGGGAATGGCTCCGATTGG+TGG + chr7_1:6717339-6717358 Msa1007290:CDS 55.0%
!! GCTCCGATTGGTGGTGGTTA+TGG + chr7_1:6717348-6717367 Msa1007290:CDS 55.0%
CCCCCATAACCACCACCAAT+CGG - chr7_1:6717354-6717373 None:intergenic 55.0%
!! CCGATTGGTGGTGGTTATGG+GGG + chr7_1:6717351-6717370 Msa1007290:CDS 55.0%
!! CGATTGGTGGTGGTTATGGG+GGG + chr7_1:6717352-6717371 Msa1007290:CDS 55.0%
GTCCATGTATCCGGGCTCAA+GGG + chr7_1:6717404-6717423 Msa1007290:CDS 55.0%
ATCCCTTGAGCCCGGATACA+TGG - chr7_1:6717409-6717428 None:intergenic 55.0%
TATCCGGGCTCAAGGGATGA+AGG + chr7_1:6717411-6717430 Msa1007290:CDS 55.0%
GAACCTTCATCCCTTGAGCC+CGG - chr7_1:6717417-6717436 None:intergenic 55.0%
! GGTGTTATAGGTAAGGGCGG+TGG + chr7_1:6717486-6717505 Msa1007290:CDS 55.0%
! CAGCTGTGCTTTTGCAACCC+CGG + chr7_1:6717762-6717781 Msa1007290:CDS 55.0%
GATGGAAGACGACATGGACG+TGG + chr7_1:6718260-6718279 Msa1007290:CDS 55.0%
CTTGGTCGAGGTGGTCCTTA+TGG + chr7_1:6718476-6718495 Msa1007290:CDS 55.0%
! TGTCTGGTGGTGTTTCTCGG+AGG + chr7_1:6718728-6718747 Msa1007290:CDS 55.0%
GGGGAAGGGAAAGGCAACAA+AGG - chr7_1:6718933-6718952 None:intergenic 55.0%
CTCAGCTGTTTGGATGGGGA+AGG - chr7_1:6718948-6718967 None:intergenic 55.0%
ACATTGCAGACCAAGGGGAG+AGG - chr7_1:6721210-6721229 None:intergenic 55.0%
ATCGGCAGCATCATTGGCCG+CGG + chr7_1:6714497-6714516 Msa1007290:CDS 60.0%
GCGCGACCCAGACACAAACA+CGG - chr7_1:6714839-6714858 None:intergenic 60.0%
GTTTGTGTCTGGGTCGCGCT+CGG + chr7_1:6714840-6714859 Msa1007290:intron 60.0%
ATTGCGGGCAAAAGCAGGCG+CGG - chr7_1:6715086-6715105 None:intergenic 60.0%
GCGCAATTGCGGGCAAAAGC+AGG - chr7_1:6715091-6715110 None:intergenic 60.0%
GATGAAGCGGGCGCAATTGC+GGG - chr7_1:6715101-6715120 None:intergenic 60.0%
GGATGAAGCGGGCGCAATTG+CGG - chr7_1:6715102-6715121 None:intergenic 60.0%
! GCACTCCAACGCGGAGCATT+TGG - chr7_1:6715132-6715151 None:intergenic 60.0%
TCAAAGCGCAAAGCGGCAGC+CGG - chr7_1:6716167-6716186 None:intergenic 60.0%
GTATGCGGCCGGTGGTTCAA+TGG + chr7_1:6717290-6717309 Msa1007290:CDS 60.0%
GGAATGGCTCCGATTGGTGG+TGG + chr7_1:6717342-6717361 Msa1007290:CDS 60.0%
GGTCCATGTATCCGGGCTCA+AGG + chr7_1:6717403-6717422 Msa1007290:CDS 60.0%
TCTGGTCCTTCTGGCGAAGC+AGG - chr7_1:6718218-6718237 None:intergenic 60.0%
GCTTCGCCAGAAGGACCAGA+TGG + chr7_1:6718218-6718237 Msa1007290:CDS 60.0%
GGAAGACGACATGGACGTGG+TGG + chr7_1:6718263-6718282 Msa1007290:CDS 60.0%
CATATGCGGCAGCTTGGTCG+AGG + chr7_1:6718464-6718483 Msa1007290:intron 60.0%
! AAACCTTGGTGGGTCCCTGC+AGG + chr7_1:6718768-6718787 Msa1007290:exon 60.0%
!! CTGGGTAGAGGCGTCAAGGT+GGG - chr7_1:6719041-6719060 None:intergenic 60.0%
!! ACTGGGTAGAGGCGTCAAGG+TGG - chr7_1:6719042-6719061 None:intergenic 60.0%
!! GTCACTGGGTAGAGGCGTCA+AGG - chr7_1:6719045-6719064 None:intergenic 60.0%
GTTTCACGATCTCGCCGCCG+CGG - chr7_1:6714517-6714536 None:intergenic 65.0%
GTTCCTGGGGTGTATGCGGC+CGG + chr7_1:6717279-6717298 Msa1007290:CDS 65.0%
TGCGGCCGGTGGTTCAATGG+TGG + chr7_1:6717293-6717312 Msa1007290:CDS 65.0%
GCGGCCGGTGGTTCAATGGT+GGG + chr7_1:6717294-6717313 Msa1007290:CDS 65.0%
GAGCCCGGATACATGGACCG+TGG - chr7_1:6717402-6717421 None:intergenic 65.0%
ATGCGGCAGCTTGGTCGAGG+TGG + chr7_1:6718467-6718486 Msa1007290:intron 65.0%
CTACCTGCAGGGACCCACCA+AGG - chr7_1:6718774-6718793 None:intergenic 65.0%
GGCAGCATCATTGGCCGCGG+CGG + chr7_1:6714500-6714519 Msa1007290:CDS 70.0%
AGGCGCGGTGCGGGTCAAAG+CGG - chr7_1:6715071-6715090 None:intergenic 70.0%
GGCAAAAGCAGGCGCGGTGC+GGG - chr7_1:6715080-6715099 None:intergenic 70.0%
GGGCAAAAGCAGGCGCGGTG+CGG - chr7_1:6715081-6715100 None:intergenic 70.0%
CGCGACGCAGCACTCCAACG+CGG - chr7_1:6715141-6715160 None:intergenic 70.0%
GGCGCGGTGCGGGTCAAAGC+GGG - chr7_1:6715070-6715089 None:intergenic 75.0%
CGCCGCGATCGCGCCGCATT+CGG + chr7_1:6715179-6715198 Msa1007290:intron 75.0%
GGCCGAATGCGGCGCGATCG+CGG - chr7_1:6715184-6715203 None:intergenic 75.0%
CCACCGGCCGCATACACCCC+AGG - chr7_1:6717285-6717304 None:intergenic 75.0%
CCTGGGGTGTATGCGGCCGG+TGG + chr7_1:6717282-6717301 Msa1007290:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 6714232 6721402 6714232 ID=Msa1007290;Name=Msa1007290
chr7_1 mRNA 6714232 6721402 6714232 ID=Msa1007290-mRNA-1;Parent=Msa1007290;Name=Msa1007290-mRNA-1;_AED=0.07;_eAED=0.07;_QI=88|0.87|0.88|1|0.75|0.66|9|2350|552
chr7_1 exon 6714232 6714757 6714232 ID=Msa1007290-mRNA-1:exon:1986;Parent=Msa1007290-mRNA-1
chr7_1 exon 6716078 6716206 6716078 ID=Msa1007290-mRNA-1:exon:1987;Parent=Msa1007290-mRNA-1
chr7_1 exon 6717180 6717608 6717180 ID=Msa1007290-mRNA-1:exon:1988;Parent=Msa1007290-mRNA-1
chr7_1 exon 6717728 6717985 6717728 ID=Msa1007290-mRNA-1:exon:1989;Parent=Msa1007290-mRNA-1
chr7_1 exon 6718092 6718364 6718092 ID=Msa1007290-mRNA-1:exon:1990;Parent=Msa1007290-mRNA-1
chr7_1 exon 6718476 6718540 6718476 ID=Msa1007290-mRNA-1:exon:1991;Parent=Msa1007290-mRNA-1
chr7_1 exon 6718702 6718789 6718702 ID=Msa1007290-mRNA-1:exon:1992;Parent=Msa1007290-mRNA-1
chr7_1 exon 6718963 6719927 6718963 ID=Msa1007290-mRNA-1:exon:1993;Parent=Msa1007290-mRNA-1
chr7_1 exon 6720039 6721402 6720039 ID=Msa1007290-mRNA-1:exon:1994;Parent=Msa1007290-mRNA-1
chr7_1 five_prime_UTR 6714232 6714319 6714232 ID=Msa1007290-mRNA-1:five_prime_utr;Parent=Msa1007290-mRNA-1
chr7_1 CDS 6714320 6714757 6714320 ID=Msa1007290-mRNA-1:cds;Parent=Msa1007290-mRNA-1
chr7_1 CDS 6716078 6716206 6716078 ID=Msa1007290-mRNA-1:cds;Parent=Msa1007290-mRNA-1
chr7_1 CDS 6717180 6717608 6717180 ID=Msa1007290-mRNA-1:cds;Parent=Msa1007290-mRNA-1
chr7_1 CDS 6717728 6717985 6717728 ID=Msa1007290-mRNA-1:cds;Parent=Msa1007290-mRNA-1
chr7_1 CDS 6718092 6718364 6718092 ID=Msa1007290-mRNA-1:cds;Parent=Msa1007290-mRNA-1
chr7_1 CDS 6718476 6718540 6718476 ID=Msa1007290-mRNA-1:cds;Parent=Msa1007290-mRNA-1
chr7_1 CDS 6718702 6718768 6718702 ID=Msa1007290-mRNA-1:cds;Parent=Msa1007290-mRNA-1
chr7_1 three_prime_UTR 6718769 6718789 6718769 ID=Msa1007290-mRNA-1:three_prime_utr;Parent=Msa1007290-mRNA-1
chr7_1 three_prime_UTR 6718963 6719927 6718963 ID=Msa1007290-mRNA-1:three_prime_utr;Parent=Msa1007290-mRNA-1
chr7_1 three_prime_UTR 6720039 6721402 6720039 ID=Msa1007290-mRNA-1:three_prime_utr;Parent=Msa1007290-mRNA-1
Gene Sequence

>Msa1007290

ATGGCTGGTCAAAGAACATCCTACGGCAACAAACGTTCACACTCACACAACAGCGTTGATGACAACAGAACCAACAACAAACGCCGTAACCCTAACACCGACGAAACTACTCCAAGAGACACATTTCACATAACCCAAGACGACACCGTTTACCGTTACCTTTGTCCGGTTCGCAAAATCGGCAGCATCATTGGCCGCGGCGGCGAGATCGTGAAACAACTCCGTCTTGATACGAAGGCGAAGATTCGAATCGGTGAAACTGTTCCTGGTTGTGATGAGCGTGTTGTTACGGTTTATAGTGTTTCTGATGAATCCAATGATTTTGAAGATTCTGGTGAGTTTATGTGTCCTGCTATGGATGCACTTGTCAGGATCCATCAGAAGGTGATTGCTGAGGATTTGCGTGGTGGTGAAGATGAAGACGTTGATATGGAGAAGATTGGGTGTGTGATTGGGAAAGGTGGGCAGATTGTTCAGAATATAAGGAGTGAGACTGGTGCGCAGATTAGGATTCTTAAGGATGACCGGCTGCCGCTTTGCGCTTTGAACTCTGACGAGCTTGTTCAGATCTCTGGTGAGATTGCTGTTGTGAAAAAGGCTCTGATTCAGGTTGCGGCACGGCTTCATGACAACCCTTCACGTACTCAACATTTGCTTACTTCTGCAGTTCCTGGGGTGTATGCGGCCGGTGGTTCAATGGTGGGTTCTCATGGTGGGGCTCCAATTATGGGAATGGCTCCGATTGGTGGTGGTTATGGGGGGTATAAAGGTGATGTTGGAGACTATCCACGGTCCATGTATCCGGGCTCAAGGGATGAAGGTTCTCCGATGGAGTTTTCAGTCCGATTTGTTTGTCCAACTGCTAACATTGGAGGTGTTATAGGTAAGGGCGGTGGTATAATAAATCAAATTAGGCAGGATTCTGGGGCAAATATCAAGGTTGATAGTTCGGCAACTGAAGGAGATGACTGCTTAATAGCCATTTCGGCGAGAGAGTTCTTTGAGGATTCATTCTCCGCAACAATTGAAGCAGCTGTGCTTTTGCAACCCCGGTGCAGTGAGAAAGTTGAAAGAGATTCTGGTATTCTCTCTTTCACTAGCCGGTTACTGGTGTCAAGCTCTCGAATTGGTTGCCTTATTGGTAAAGGAGGATCAATCATTACTGAGATGAGAAGGCTTACAAAAGCTAACATCCGCATCCTATCTAAGGAGGATCTCCCTAAAATTGCAACTGAAGATGATGAAATGGTGCAGATTTCGGGGGAACTAGATATTGCCAAGGACGCTCTTGTGCAAGTACTTACCCGGCTGAGAGCAAATCTTTTTGATAAGGAGCGTTCTGTCTCATCATTGCTTCCACCAGTACTTGCATATCTTCCTGCTTCGCCAGAAGGACCAGATGGTTTCAACTATGAAGGTAGAGATGGAAGACGACATGGACGTGGTGGCTATTCTTATTCTGATGGCTATGGAGGCTCAAGTGATTTTGCATCTGGCGACGGTTATGGAAACTATGGAAGTTCACAGCTTGGTCGAGGTGGTCCTTATGGAGCTTATGGAAGTTATGCTACGGAACGGACTAGTACTTCTGGATTGTCTGATAGATTGTCCGACAGATTGTCTGGTGGTGTTTCTCGGAGGAGAAACCATGGTTACTAA
Protein sequence

>Msa1007290

MAGQRTSYGNKRSHSHNSVDDNRTNNKRRNPNTDETTPRDTFHITQDDTVYRYLCPVRKIGSIIGRGGEIVKQLRLDTKAKIRIGETVPGCDERVVTVYSVSDESNDFEDSGEFMCPAMDALVRIHQKVIAEDLRGGEDEDVDMEKIGCVIGKGGQIVQNIRSETGAQIRILKDDRLPLCALNSDELVQISGEIAVVKKALIQVAARLHDNPSRTQHLLTSAVPGVYAAGGSMVGSHGGAPIMGMAPIGGGYGGYKGDVGDYPRSMYPGSRDEGSPMEFSVRFVCPTANIGGVIGKGGGIINQIRQDSGANIKVDSSATEGDDCLIAISAREFFEDSFSATIEAAVLLQPRCSEKVERDSGILSFTSRLLVSSSRIGCLIGKGGSIITEMRRLTKANIRILSKEDLPKIATEDDEMVQISGELDIAKDALVQVLTRLRANLFDKERSVSSLLPPVLAYLPASPEGPDGFNYEGRDGRRHGRGGYSYSDGYGGSSDFASGDGYGNYGSSQLGRGGPYGAYGSYATERTSTSGLSDRLSDRLSGGVSRRRNHGY*