AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1323800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1323800 MtrunA17_Chr1g0205411 81.377 247 46 0 1 247 332 578 7.11e-148 425
Msa1323800 MtrunA17_Chr8g0344341 80.816 245 45 1 2 246 334 576 9.02e-144 414
Msa1323800 MtrunA17_Chr8g0356451 97.701 87 2 0 87 173 1 87 3.12e-59 182
Msa1323800 MtrunA17_Chr8g0356461 90.625 64 5 1 185 247 1 64 6.31e-34 117
Msa1323800 MtrunA17_Chr7g0221321 29.469 207 131 3 2 205 522 716 4.32e-20 89.0
Msa1323800 MtrunA17_Chr6g0456451 28.986 207 132 3 2 205 524 718 6.03e-19 85.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1323800 AT3G48150.2 71.545 246 70 0 1 246 220 465 6.35e-136 390
Msa1323800 AT3G48150.1 71.545 246 70 0 1 246 333 578 3.10e-134 390
Msa1323800 AT3G16320.1 28.431 204 114 3 2 173 495 698 8.55e-20 88.6
Msa1323800 AT3G16320.2 28.431 204 114 3 2 173 484 687 9.62e-20 88.6
Msa1323800 AT2G20000.1 28.000 225 147 3 2 223 513 725 1.07e-19 88.2
Msa1323800 AT2G20000.2 31.852 135 92 0 2 136 513 647 4.27e-18 83.6

Find 142 sgRNAs with CRISPR-Local

Find 530 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGAATCTTGTTATATTAT+TGG 0.100460 8_4:+32446963 Msa1323800:CDS
GATAGTTTCTGTTCAGTTTA+AGG 0.124435 8_4:-32447043 None:intergenic
TGTGCTGCATTCTTCAATTT+TGG 0.172410 8_4:+32447842 Msa1323800:three_prime_UTR
ATAAAGCTTACAGTTGATTT+AGG 0.198264 8_4:-32440927 None:intergenic
TGGGAACTATTACAGTTTAA+AGG 0.211236 8_4:+32446983 Msa1323800:CDS
TCTATCTGCTTGGACACTTA+TGG 0.214889 8_4:+32447064 Msa1323800:CDS
GATCAGAATTAAGTAATTAT+TGG 0.226911 8_4:+32441288 Msa1323800:five_prime_UTR
TTTGGACAAGCTGTGTGTTT+TGG 0.249614 8_4:+32441226 Msa1323800:five_prime_UTR
CGCTATGCATCCTTAGTTCT+TGG 0.250723 8_4:-32446682 None:intergenic
CTGAATCTTGTTATATTATT+GGG 0.254755 8_4:+32446964 Msa1323800:CDS
TTTCAAACTGTATTGGGTTT+TGG 0.260377 8_4:-32446774 None:intergenic
ATGACAAGAGTTATAGAAAT+TGG 0.272333 8_4:-32440902 None:intergenic
TGGATAATTCTGCTGGAAAA+AGG 0.285711 8_4:+32441402 Msa1323800:five_prime_UTR
TTTGAGTGAGAATTAGAAAT+AGG 0.298095 8_4:+32441167 Msa1323800:five_prime_UTR
CAAATTCTTTCAAACTGTAT+TGG 0.299689 8_4:-32446781 None:intergenic
GCAAAATCAAAGATTGTTAA+AGG 0.300521 8_4:+32441191 Msa1323800:five_prime_UTR
AAATTCTTTCAAACTGTATT+GGG 0.302755 8_4:-32446780 None:intergenic
ATAGTTTCTGTTCAGTTTAA+GGG 0.307375 8_4:-32447042 None:intergenic
AGTTCTCCCTCATAATTGTT+GGG 0.309844 8_4:+32440979 Msa1323800:five_prime_UTR
GAATATTTACTCACAGCTTT+TGG 0.311134 8_4:+32446722 Msa1323800:five_prime_UTR
TAAAGGAATTTCAAGTTGTT+TGG 0.314231 8_4:+32441208 Msa1323800:five_prime_UTR
GGGAACTATTACAGTTTAAA+GGG 0.318469 8_4:+32446984 Msa1323800:CDS
AATGAAGATTTGAAGAGAAA+AGG 0.321710 8_4:-32440844 None:intergenic
TCCATGTCATCCACTCTATA+TGG 0.324005 8_4:-32446845 None:intergenic
ACTCGTCTTCTTGATTATAC+TGG 0.333176 8_4:+32447572 Msa1323800:CDS
ATGAAGATTTGAAGAGAAAA+GGG 0.337477 8_4:-32440843 None:intergenic
AAGTAATGAAGCGCCCAAAA+AGG 0.358468 8_4:-32447215 None:intergenic
CTATCTGCTTGGACACTTAT+GGG 0.359090 8_4:+32447065 Msa1323800:CDS
CCAATAATATAACAAGATTC+AGG 0.361390 8_4:-32446963 None:intergenic
GTACTTCATCAAGAGACATT+AGG 0.365396 8_4:-32447812 None:intergenic
TTGCAAATTATTACAAATCA+AGG 0.367506 8_4:+32447519 Msa1323800:CDS
ATCGAAGTTTGGGATGAATT+CGG 0.389791 8_4:+32441526 Msa1323800:five_prime_UTR
CAGTTCTCCCTCATAATTGT+TGG 0.391076 8_4:+32440978 Msa1323800:five_prime_UTR
CCTCATCGAGCATGTGAATC+TGG 0.394225 8_4:-32447310 None:intergenic
ATTGACAACCGGGAATCATT+TGG 0.397870 8_4:-32447260 None:intergenic
AGTAAAATGCTGCCTCTTCA+TGG 0.401716 8_4:-32447424 None:intergenic
TCTATCAGCCAAATGATTCC+CGG 0.401773 8_4:+32447252 Msa1323800:CDS
TTTCCGAGTTCATTACTAAT+CGG 0.402134 8_4:-32441366 None:intergenic
AAGCTGCAGTTAAGATGTTT+CGG 0.409549 8_4:+32441565 Msa1323800:five_prime_UTR
GAAATTTATATCCGCTTTGA+AGG 0.413198 8_4:-32441335 None:intergenic
GAGCCATTGCAATTGACAAC+CGG 0.416984 8_4:-32447271 None:intergenic
ACCATATAAGTACAAACAAA+AGG 0.420898 8_4:-32446474 None:intergenic
AGATTCAGGTCTGTATTTAT+CGG 0.422176 8_4:-32446949 None:intergenic
TAAAAGTGATGTTGTGAATC+AGG 0.422566 8_4:+32446394 Msa1323800:five_prime_UTR
AGCAAAGCCTCAACCATGTT+AGG 0.424072 8_4:-32447491 None:intergenic
ACAATCTAGTTTCCCTCCAT+TGG 0.424954 8_4:+32447771 Msa1323800:CDS
ATTTGAAGAGAAAAGGGTTA+GGG 0.427160 8_4:-32440837 None:intergenic
TACTTCATCAAGAGACATTA+GGG 0.431430 8_4:-32447811 None:intergenic
TAAATAACTACCCTTGGAAC+TGG 0.434575 8_4:+32446555 Msa1323800:five_prime_UTR
TCAAAACTCTTATTAATCAT+AGG 0.434814 8_4:-32441504 None:intergenic
TAGTGTTGCATCAGAACTAA+TGG 0.439417 8_4:+32447885 Msa1323800:three_prime_UTR
TTGAAGTTGGATAATTCTGC+TGG 0.447928 8_4:+32441395 Msa1323800:five_prime_UTR
TGGAAAGCTGCATTCAGAGC+TGG 0.448234 8_4:+32447397 Msa1323800:CDS
GTCTTAATCTCAGTAGTCAT+TGG 0.453258 8_4:+32446630 Msa1323800:five_prime_UTR
TCGGAAAGTGCGTTTGAAGT+TGG 0.455733 8_4:+32441382 Msa1323800:five_prime_UTR
CGGAGACTTCAGAAATGTTA+AGG 0.456422 8_4:+32441639 Msa1323800:five_prime_UTR
TTTATTGATGTTTAAAAGCA+AGG 0.457257 8_4:+32441061 Msa1323800:five_prime_UTR
GATATCAACGGAAGTGCATA+AGG 0.458806 8_4:-32446600 None:intergenic
ACAGAAAGGCAATAAAACTT+TGG 0.461435 8_4:+32446508 Msa1323800:five_prime_UTR
CGTGATTACCGTGCTTGGTA+TGG 0.461627 8_4:+32447161 Msa1323800:CDS
TGCTGTGGGTGCCTATCGTC+AGG 0.461676 8_4:+32447121 Msa1323800:CDS
GATTTGAAGAGAAAAGGGTT+AGG 0.462811 8_4:-32440838 None:intergenic
TGGATTTAGACTAGTTAGAA+AGG 0.467465 8_4:+32441467 Msa1323800:five_prime_UTR
AGCACACCGGGAGCTTCATT+AGG 0.483434 8_4:+32441604 Msa1323800:five_prime_UTR
CCTTAGTTCTTGGTAGAGAC+TGG 0.487318 8_4:-32446672 None:intergenic
CTGAATGCAGCTTTCCAAGT+TGG 0.487798 8_4:-32447391 None:intergenic
GGAAAGCTGCATTCAGAGCT+GGG 0.488825 8_4:+32447398 Msa1323800:CDS
GTTTCGGATAAAAGTGCTTA+CGG 0.489459 8_4:+32441581 Msa1323800:five_prime_UTR
GCAATTGCTACGCACCAACT+TGG 0.491024 8_4:+32447377 Msa1323800:CDS
ATAGAACTTGACGGACCTCT+TGG 0.491087 8_4:+32446371 Msa1323800:five_prime_UTR
TAGCACATTTAAATCTAAAG+TGG 0.493100 8_4:+32447995 Msa1323800:three_prime_UTR
AGGTCTGTATTTATCGGTCA+TGG 0.495829 8_4:-32446943 None:intergenic
AATCTGTAAATAACTACCCT+TGG 0.497774 8_4:+32446549 Msa1323800:five_prime_UTR
TTGATTTGTAATAATTTGCA+AGG 0.500059 8_4:-32447517 None:intergenic
AGGACAAGCTTACGAGATGA+TGG 0.502402 8_4:+32447187 Msa1323800:CDS
GATGAAGAAGCAGACATAGC+TGG 0.505357 8_4:+32445627 Msa1323800:five_prime_UTR
TCTCAGTAGTCATTGGATGA+AGG 0.506459 8_4:+32446637 Msa1323800:five_prime_UTR
CTACTGATGTGTACTTTACA+TGG 0.507160 8_4:-32445651 None:intergenic
AAACTTGAGGAAAGTGATAG+AGG 0.508866 8_4:+32441129 Msa1323800:five_prime_UTR
GTTCTCCCTCATAATTGTTG+GGG 0.516201 8_4:+32440980 Msa1323800:five_prime_UTR
ACCCTTGGAACTGGAATGCA+TGG 0.516827 8_4:+32446564 Msa1323800:five_prime_UTR
GGAGTTGATTTCATTAGAGA+GGG 0.518238 8_4:+32446415 Msa1323800:five_prime_UTR
TTGCGAAATGAGCTAAATTG+TGG 0.520903 8_4:+32441447 Msa1323800:five_prime_UTR
TATTTATCGGTCATGGTCCA+TGG 0.523538 8_4:-32446936 None:intergenic
TTTGGCACGTACAGTTCTTG+TGG 0.529861 8_4:+32446526 Msa1323800:five_prime_UTR
GAAGAAACAATAGAACTTGA+CGG 0.529935 8_4:+32446362 Msa1323800:five_prime_UTR
GTCCATGCATTCCAGTTCCA+AGG 0.536564 8_4:-32446566 None:intergenic
AGGAGTTGATTTCATTAGAG+AGG 0.538821 8_4:+32446414 Msa1323800:five_prime_UTR
CCTTGCTCATAAAGTATCCA+TGG 0.541505 8_4:+32446919 Msa1323800:five_prime_UTR
CTCCAATGTGCTATATGCTA+AGG 0.543521 8_4:+32446874 Msa1323800:five_prime_UTR
CCAGTCTCTACCAAGAACTA+AGG 0.548129 8_4:+32446672 Msa1323800:five_prime_UTR
TCAACTTGTGGGTTAATGTA+TGG 0.553592 8_4:+32441015 Msa1323800:five_prime_UTR
AAGTGCTTACGGAGCACACC+GGG 0.554318 8_4:+32441592 Msa1323800:five_prime_UTR
ACAGAAACTATCTATCTGCT+TGG 0.555103 8_4:+32447054 Msa1323800:CDS
CCATATAAGTACAAACAAAA+GGG 0.555110 8_4:-32446473 None:intergenic
TTCCCGGTTGTCAATTGCAA+TGG 0.558643 8_4:+32447268 Msa1323800:CDS
AGAGGATGGAATCTGAAGAG+AGG 0.560802 8_4:+32447462 Msa1323800:CDS
ATCGGCGTGATTACCGTGCT+TGG 0.563363 8_4:+32447156 Msa1323800:CDS
GGAAAGTGATCAACATCCAA+TGG 0.566140 8_4:-32447787 None:intergenic
CAAGTTATTATACGATAGGA+TGG 0.566557 8_4:+32445599 Msa1323800:five_prime_UTR
GGCGGGAGAAAAGCGAAAAG+AGG 0.569695 8_4:+32446340 Msa1323800:intron
AAATTTATATCCGCTTTGAA+GGG 0.570994 8_4:-32441334 None:intergenic
AACTGAGTTCAGTTAAGAGA+GGG 0.574190 8_4:-32440960 None:intergenic
GTCAGGCTGTTGATATAGAT+CGG 0.576817 8_4:+32447138 Msa1323800:CDS
TGTACAAGTTATTATACGAT+AGG 0.577409 8_4:+32445595 Msa1323800:five_prime_UTR
GAGAAGATTTGAAGAAGCAG+AGG 0.585735 8_4:+32447541 Msa1323800:CDS
GAATGGACCTAACATGGTTG+AGG 0.586258 8_4:+32447484 Msa1323800:CDS
ATGGAATCTGAAGAGAGGAA+TGG 0.590186 8_4:+32447467 Msa1323800:CDS
TGTGCTTGAAGCTTTAGTCA+TGG 0.594704 8_4:+32441038 Msa1323800:five_prime_UTR
GGAACTATTACAGTTTAAAG+GGG 0.594968 8_4:+32446985 Msa1323800:CDS
AAGACTATTTAAGATATCAA+CGG 0.594984 8_4:-32446612 None:intergenic
TACCGTGCTTGGTATGGACT+AGG 0.597512 8_4:+32447167 Msa1323800:CDS
TTGAGTCCTAATGAAGCTCC+CGG 0.598699 8_4:-32441610 None:intergenic
AGCCATTGCAATTGACAACC+GGG 0.600474 8_4:-32447270 None:intergenic
AGGCGATAAAGTGTTACAGA+AGG 0.600848 8_4:+32447330 Msa1323800:CDS
TCCATGCATTCCAGTTCCAA+GGG 0.603030 8_4:-32446565 None:intergenic
GGTCTCGTACTTAAACAGAA+AGG 0.603062 8_4:+32446494 Msa1323800:five_prime_UTR
TTCCTTAGCATATAGCACAT+TGG 0.603607 8_4:-32446876 None:intergenic
CCATGGATACTTTATGAGCA+AGG 0.606069 8_4:-32446919 None:intergenic
AGGGCATCAAATTGTAATGA+CGG 0.608493 8_4:+32447350 Msa1323800:CDS
AGAGAGGAATGGACCTAACA+TGG 0.611348 8_4:+32447478 Msa1323800:CDS
AGTGTTCTCTGTTGTGTGAG+AGG 0.612505 8_4:-32440786 None:intergenic
AAGTGATCAACATCCAATGG+AGG 0.617646 8_4:-32447784 None:intergenic
TATATCAACAGCCTGACGAT+AGG 0.619426 8_4:-32447132 None:intergenic
GAACTGAGTTCAGTTAAGAG+AGG 0.628312 8_4:-32440961 None:intergenic
ATTCCGATTAGTAATGAACT+CGG 0.629078 8_4:+32441363 Msa1323800:five_prime_UTR
TTTGAAGAGAAAAGGGTTAG+GGG 0.632345 8_4:-32440836 None:intergenic
TCCATATAGAGTGGATGACA+TGG 0.635117 8_4:+32446844 Msa1323800:five_prime_UTR
GTCCTAGTCCATACCAAGCA+CGG 0.636493 8_4:-32447169 None:intergenic
GGACAAGCTTACGAGATGAT+GGG 0.636745 8_4:+32447188 Msa1323800:CDS
GGCGATAAAGTGTTACAGAA+GGG 0.637537 8_4:+32447331 Msa1323800:CDS
AGTGATCAACATCCAATGGA+GGG 0.639833 8_4:-32447783 None:intergenic
AGAGCTGGGACACCATGAAG+AGG 0.640240 8_4:+32447412 Msa1323800:CDS
CCAGATTCACATGCTCGATG+AGG 0.655750 8_4:+32447310 Msa1323800:CDS
CAAGAGAAAGAAGAGAACAG+AGG 0.659168 8_4:-32440810 None:intergenic
ACATTCAATTCCCTTCAAAG+CGG 0.668704 8_4:+32441324 Msa1323800:five_prime_UTR
CTATATTTGAAGAACTGCTG+AGG 0.671189 8_4:+32446816 Msa1323800:five_prime_UTR
TGTAAAGTACACATCAGTAG+AGG 0.675724 8_4:+32445654 Msa1323800:five_prime_UTR
GAGGACTGATCCATATAGAG+TGG 0.685603 8_4:+32446835 Msa1323800:five_prime_UTR
AAAGTGCTTACGGAGCACAC+CGG 0.700164 8_4:+32441591 Msa1323800:five_prime_UTR
TTCATCAAGAGACATTAGGG+AGG 0.723637 8_4:-32447808 None:intergenic
TCATTAGGACTCAAGCAGCG+CGG 0.755879 8_4:+32441619 Msa1323800:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATTTATTTGAATGTTAA+TGG + chr8_4:32441977-32441996 Msa1323800:intron 10.0%
!! ATTTAGATCATTAAATTATT+TGG - chr8_4:32447696-32447715 None:intergenic 10.0%
!! ACAAAAAAAAAATTGAAGTT+AGG + chr8_4:32441089-32441108 Msa1323800:five_prime_UTR 15.0%
!! CAAAAAAAAAATTGAAGTTA+GGG + chr8_4:32441090-32441109 Msa1323800:five_prime_UTR 15.0%
!! TTGATGTATATATATACTTA+TGG + chr8_4:32442545-32442564 Msa1323800:intron 15.0%
!! AAAAAAAAATTATGGAATCA+AGG + chr8_4:32443225-32443244 Msa1323800:intron 15.0%
!!! AAGTTATGTTTAGAATAAAT+TGG + chr8_4:32443306-32443325 Msa1323800:intron 15.0%
!! ATATATTGAATATATGATTG+TGG + chr8_4:32443487-32443506 Msa1323800:intron 15.0%
!!! TTATCTTTTTACTTTAGTTT+TGG - chr8_4:32444390-32444409 None:intergenic 15.0%
!! AAAACTAAAGTAAAAAGATA+AGG + chr8_4:32444389-32444408 Msa1323800:intron 15.0%
!!! TACATCTGAAATAAATAAAA+GGG - chr8_4:32445579-32445598 None:intergenic 15.0%
!!! TTTTTAAGAAAATCAACTTG+TGG + chr8_4:32441003-32441022 Msa1323800:five_prime_UTR 20.0%
!!! TTTTAAGAAAATCAACTTGT+GGG + chr8_4:32441004-32441023 Msa1323800:five_prime_UTR 20.0%
!! TTTATTGATGTTTAAAAGCA+AGG + chr8_4:32441061-32441080 Msa1323800:five_prime_UTR 20.0%
!! GATCAGAATTAAGTAATTAT+TGG + chr8_4:32441288-32441307 Msa1323800:five_prime_UTR 20.0%
!! TCAAAACTCTTATTAATCAT+AGG - chr8_4:32441507-32441526 None:intergenic 20.0%
!! AAATTGATGAATTAAGATGT+TGG + chr8_4:32441840-32441859 Msa1323800:intron 20.0%
!! AATTGATGAATTAAGATGTT+GGG + chr8_4:32441841-32441860 Msa1323800:intron 20.0%
!!! TTTTGATTGTTAGAGAATTA+AGG + chr8_4:32441951-32441970 Msa1323800:intron 20.0%
!!! AAAGCATTCAAATATATCAA+AGG - chr8_4:32442261-32442280 None:intergenic 20.0%
!! AATAATATGATATGTCCAAA+TGG - chr8_4:32442381-32442400 None:intergenic 20.0%
!!! TTTCAAAATAACTTGTCATA+TGG + chr8_4:32442724-32442743 Msa1323800:intron 20.0%
!! TTAATCCTATGAATTTACTT+TGG + chr8_4:32442765-32442784 Msa1323800:intron 20.0%
!!! AAAATGAGGAATTTTAGTTA+TGG + chr8_4:32443368-32443387 Msa1323800:intron 20.0%
!! AAATTGTATAAACCCAAAAT+GGG + chr8_4:32445458-32445477 Msa1323800:intron 20.0%
!! GAAATAAATAAAAGGGATTT+GGG - chr8_4:32445572-32445591 None:intergenic 20.0%
!! TGAAATAAATAAAAGGGATT+TGG - chr8_4:32445573-32445592 None:intergenic 20.0%
!!! GTACATCTGAAATAAATAAA+AGG - chr8_4:32445580-32445599 None:intergenic 20.0%
!!! AACCAAGTTTTTTTAGTTTT+TGG + chr8_4:32446271-32446290 Msa1323800:intron 20.0%
!! TTCCAAAAACTAAAAAAACT+TGG - chr8_4:32446276-32446295 None:intergenic 20.0%
!!! AAGACTATTTAAGATATCAA+CGG - chr8_4:32446615-32446634 None:intergenic 20.0%
!! AAATTCTTTCAAACTGTATT+GGG - chr8_4:32446783-32446802 None:intergenic 20.0%
!!! CTGAATCTTGTTATATTATT+GGG + chr8_4:32446964-32446983 Msa1323800:CDS 20.0%
!!! AAAAAGCAGTTCAATATTTT+AGG + chr8_4:32447015-32447034 Msa1323800:CDS 20.0%
!!! TTGATTTGTAATAATTTGCA+AGG - chr8_4:32447520-32447539 None:intergenic 20.0%
!! TTGCAAATTATTACAAATCA+AGG + chr8_4:32447519-32447538 Msa1323800:CDS 20.0%
!!! CAAATAAAAATTGAAAGTGT+AGG - chr8_4:32447620-32447639 None:intergenic 20.0%
! ATGAAGATTTGAAGAGAAAA+GGG - chr8_4:32440846-32440865 None:intergenic 25.0%
! AATGAAGATTTGAAGAGAAA+AGG - chr8_4:32440847-32440866 None:intergenic 25.0%
! ATGACAAGAGTTATAGAAAT+TGG - chr8_4:32440905-32440924 None:intergenic 25.0%
!! ATAAAGCTTACAGTTGATTT+AGG - chr8_4:32440930-32440949 None:intergenic 25.0%
! AAAAAATTGAAGTTAGGGTT+TGG + chr8_4:32441095-32441114 Msa1323800:five_prime_UTR 25.0%
! AAAAATTGAAGTTAGGGTTT+GGG + chr8_4:32441096-32441115 Msa1323800:five_prime_UTR 25.0%
! TTTGAGTGAGAATTAGAAAT+AGG + chr8_4:32441167-32441186 Msa1323800:five_prime_UTR 25.0%
! GCAAAATCAAAGATTGTTAA+AGG + chr8_4:32441191-32441210 Msa1323800:five_prime_UTR 25.0%
!!! TAAAGGAATTTCAAGTTGTT+TGG + chr8_4:32441208-32441227 Msa1323800:five_prime_UTR 25.0%
!! AAATTTATATCCGCTTTGAA+GGG - chr8_4:32441337-32441356 None:intergenic 25.0%
!!! TGAGAATTGAATTTGTTGTT+TGG + chr8_4:32441693-32441712 Msa1323800:intron 25.0%
! GCATACTTGTAGAAAAAATT+AGG + chr8_4:32441773-32441792 Msa1323800:intron 25.0%
! ACTTGTAGAAAAAATTAGGT+TGG + chr8_4:32441777-32441796 Msa1323800:intron 25.0%
! CTTGTAGAAAAAATTAGGTT+GGG + chr8_4:32441778-32441797 Msa1323800:intron 25.0%
!! TTGTAGAAAAAATTAGGTTG+GGG + chr8_4:32441779-32441798 Msa1323800:intron 25.0%
! ACATCAATCACAGTTAATTT+CGG - chr8_4:32442045-32442064 None:intergenic 25.0%
! TGATGAAATGTATAAATGCT+AGG + chr8_4:32442090-32442109 Msa1323800:intron 25.0%
! ATTCAAAGTCATATGCAATT+AGG - chr8_4:32442144-32442163 None:intergenic 25.0%
!! CAGGTTAAGATTGTATTTTA+AGG + chr8_4:32442347-32442366 Msa1323800:intron 25.0%
! TATAGAAAATCCCAGAAAAA+TGG + chr8_4:32442625-32442644 Msa1323800:intron 25.0%
! ACTTATAAAAACATGCTACA+AGG - chr8_4:32442669-32442688 None:intergenic 25.0%
! AAGTTACAAACTTTGTTCTA+TGG + chr8_4:32442685-32442704 Msa1323800:intron 25.0%
! AGTTACAAACTTTGTTCTAT+GGG + chr8_4:32442686-32442705 Msa1323800:intron 25.0%
!!! TCATATGGTAATTTGTTATG+AGG + chr8_4:32442739-32442758 Msa1323800:intron 25.0%
!!! CATATGGTAATTTGTTATGA+GGG + chr8_4:32442740-32442759 Msa1323800:intron 25.0%
! TATCACCAAAGTAAATTCAT+AGG - chr8_4:32442773-32442792 None:intergenic 25.0%
! ATGTTAGTATTCATGTTGAA+GGG - chr8_4:32443265-32443284 None:intergenic 25.0%
! TATGTTAGTATTCATGTTGA+AGG - chr8_4:32443266-32443285 None:intergenic 25.0%
! TTTACCAATAGTTGAAAATG+AGG + chr8_4:32443354-32443373 Msa1323800:intron 25.0%
!! AATTCCTCATTTTCAACTAT+TGG - chr8_4:32443361-32443380 None:intergenic 25.0%
! TGTGGTTATTGATATGATTA+TGG + chr8_4:32443505-32443524 Msa1323800:intron 25.0%
! TATTTGATAGAACATTATGG+CGG - chr8_4:32443599-32443618 None:intergenic 25.0%
! TGGTATTTGATAGAACATTA+TGG - chr8_4:32443602-32443621 None:intergenic 25.0%
! GTTCTATCAAATACCATATT+TGG + chr8_4:32443606-32443625 Msa1323800:intron 25.0%
! AACCATTAGAAAAGATTTAG+AGG - chr8_4:32443646-32443665 None:intergenic 25.0%
!! TTTTCTAATGGTTTCTCTAA+TGG + chr8_4:32443653-32443672 Msa1323800:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - chr8_4:32443788-32443807 None:intergenic 25.0%
! AAGTAAAAAGATAAGGACTT+AGG + chr8_4:32444396-32444415 Msa1323800:intron 25.0%
! AGTAAAAAGATAAGGACTTA+GGG + chr8_4:32444397-32444416 Msa1323800:intron 25.0%
! ATTCCAATCTATAAGAACAA+GGG - chr8_4:32444833-32444852 None:intergenic 25.0%
! AATTCCAATCTATAAGAACA+AGG - chr8_4:32444834-32444853 None:intergenic 25.0%
! GTTCTTATAGATTGGAATTA+AGG + chr8_4:32444835-32444854 Msa1323800:intron 25.0%
! ATCCTTCATTAAATAAGTTG+TGG + chr8_4:32445110-32445129 Msa1323800:intron 25.0%
! TTCCACAACTTATTTAATGA+AGG - chr8_4:32445115-32445134 None:intergenic 25.0%
! CTTTAATCATAAACATAGCT+AGG - chr8_4:32445354-32445373 None:intergenic 25.0%
! GAAATTGTATAAACCCAAAA+TGG + chr8_4:32445457-32445476 Msa1323800:intron 25.0%
! TGTACAAGTTATTATACGAT+AGG + chr8_4:32445595-32445614 Msa1323800:five_prime_UTR 25.0%
! AAAGTAAAGAATTTGATCTG+GGG - chr8_4:32445998-32446017 None:intergenic 25.0%
! GAAAGTAAAGAATTTGATCT+GGG - chr8_4:32445999-32446018 None:intergenic 25.0%
! CAGATCAAATTCTTTACTTT+CGG + chr8_4:32445998-32446017 Msa1323800:intron 25.0%
! CCATATAAGTACAAACAAAA+GGG - chr8_4:32446476-32446495 None:intergenic 25.0%
! ACCATATAAGTACAAACAAA+AGG - chr8_4:32446477-32446496 None:intergenic 25.0%
! CAAATTCTTTCAAACTGTAT+TGG - chr8_4:32446784-32446803 None:intergenic 25.0%
! CCAATAATATAACAAGATTC+AGG - chr8_4:32446966-32446985 None:intergenic 25.0%
!! CCTGAATCTTGTTATATTAT+TGG + chr8_4:32446963-32446982 Msa1323800:CDS 25.0%
! ATAGTTTCTGTTCAGTTTAA+GGG - chr8_4:32447045-32447064 None:intergenic 25.0%
! GTATGTAGAAATGAAAAACA+CGG + chr8_4:32447094-32447113 Msa1323800:CDS 25.0%
! TATGTAGAAATGAAAAACAC+GGG + chr8_4:32447095-32447114 Msa1323800:CDS 25.0%
! ACTACAAAAAAGATTTAGAG+AGG + chr8_4:32447444-32447463 Msa1323800:CDS 25.0%
! ATGATCTAAATCATTCTTTC+AGG + chr8_4:32447705-32447724 Msa1323800:intron 25.0%
ATTTGAAGAGAAAAGGGTTA+GGG - chr8_4:32440840-32440859 None:intergenic 30.0%
AAAAACCCCAACAATTATGA+GGG - chr8_4:32440988-32441007 None:intergenic 30.0%
TAAAAACCCCAACAATTATG+AGG - chr8_4:32440989-32441008 None:intergenic 30.0%
GAAATTTATATCCGCTTTGA+AGG - chr8_4:32441338-32441357 None:intergenic 30.0%
ATTCCGATTAGTAATGAACT+CGG + chr8_4:32441363-32441382 Msa1323800:five_prime_UTR 30.0%
TTTCCGAGTTCATTACTAAT+CGG - chr8_4:32441369-32441388 None:intergenic 30.0%
! TGGATTTAGACTAGTTAGAA+AGG + chr8_4:32441467-32441486 Msa1323800:five_prime_UTR 30.0%
!! TAAGAGTTTTGATCGAAGTT+TGG + chr8_4:32441515-32441534 Msa1323800:five_prime_UTR 30.0%
!! AAGAGTTTTGATCGAAGTTT+GGG + chr8_4:32441516-32441535 Msa1323800:five_prime_UTR 30.0%
!! GAATTGAATTTGTTGTTTGG+TGG + chr8_4:32441696-32441715 Msa1323800:intron 30.0%
!! AATTTGTTGTTTGGTGGTAA+TGG + chr8_4:32441702-32441721 Msa1323800:intron 30.0%
!! ATTTGTTGTTTGGTGGTAAT+GGG + chr8_4:32441703-32441722 Msa1323800:intron 30.0%
! TTTTCTACAAGTATGCATGA+GGG - chr8_4:32441769-32441788 None:intergenic 30.0%
! TTTTTCTACAAGTATGCATG+AGG - chr8_4:32441770-32441789 None:intergenic 30.0%
GCAGTCATATGCATATTATA+TGG + chr8_4:32441922-32441941 Msa1323800:intron 30.0%
GAAATTAACTGTGATTGATG+TGG + chr8_4:32442044-32442063 Msa1323800:intron 30.0%
GGTTTATTGAATTCTTGAAG+TGG + chr8_4:32442065-32442084 Msa1323800:intron 30.0%
TAGGACATCAATAACTTTCT+AGG - chr8_4:32442125-32442144 None:intergenic 30.0%
TTGAATTGCTTTCATGTGTA+TGG + chr8_4:32442205-32442224 Msa1323800:intron 30.0%
AAATACAATCTTAACCTGCA+AGG - chr8_4:32442345-32442364 None:intergenic 30.0%
! TTTAAGGTCATAACTCCATT+TGG + chr8_4:32442363-32442382 Msa1323800:intron 30.0%
TTTCAATACAATCTGTTGCA+TGG - chr8_4:32442471-32442490 None:intergenic 30.0%
CAACAGATTGTATTGAAAAC+AGG + chr8_4:32442473-32442492 Msa1323800:intron 30.0%
CATCAAGCATAATGTAAAAG+AGG - chr8_4:32442520-32442539 None:intergenic 30.0%
!! CTACTCATTTCCATTTTTCT+GGG - chr8_4:32442638-32442657 None:intergenic 30.0%
ATAATGTAGTCTATGACGTA+CGG + chr8_4:32442858-32442877 Msa1323800:intron 30.0%
TAGTAACGAATGTGAAAACT+CGG + chr8_4:32443077-32443096 Msa1323800:intron 30.0%
GGAATCAAGGAAAAATTCTA+AGG + chr8_4:32443238-32443257 Msa1323800:intron 30.0%
!!! GAATTTTAGTTATGGAACTC+CGG + chr8_4:32443376-32443395 Msa1323800:intron 30.0%
! TTTCCGATAACAACTAGTTT+CGG - chr8_4:32443411-32443430 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG + chr8_4:32443641-32443660 Msa1323800:intron 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG + chr8_4:32443663-32443682 Msa1323800:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG + chr8_4:32443792-32443811 Msa1323800:intron 30.0%
TTACACGGTTTAGATATCTT+GGG - chr8_4:32444124-32444143 None:intergenic 30.0%
ATATCTAAACCGTGTAACTT+GGG + chr8_4:32444127-32444146 Msa1323800:intron 30.0%
TGGAATGTAACTTCAGTAAA+AGG - chr8_4:32444199-32444218 None:intergenic 30.0%
!!! TTTAGTTTTGGATGTACTGA+CGG - chr8_4:32444378-32444397 None:intergenic 30.0%
TATTGTTATGGGAAAATCTC+CGG + chr8_4:32444439-32444458 Msa1323800:intron 30.0%
!!! AGTTTTCATTGATTTGGAGA+AGG - chr8_4:32444597-32444616 None:intergenic 30.0%
!! GCACTTAGTTTTCATTGATT+TGG - chr8_4:32444603-32444622 None:intergenic 30.0%
TTCCAATCTATAAGAACAAG+GGG - chr8_4:32444832-32444851 None:intergenic 30.0%
! AACTTTTCAACGAGATTATG+AGG - chr8_4:32444895-32444914 None:intergenic 30.0%
GGAACTATAACTATTATCGT+CGG - chr8_4:32445042-32445061 None:intergenic 30.0%
GACGATAATAGTTATAGTTC+CGG + chr8_4:32445041-32445060 Msa1323800:intron 30.0%
AAGTGTATTAAGGATGAAGA+GGG - chr8_4:32445187-32445206 None:intergenic 30.0%
GAAGGATTATACCAATCTTT+AGG - chr8_4:32445286-32445305 None:intergenic 30.0%
CAAGTTATTATACGATAGGA+TGG + chr8_4:32445599-32445618 Msa1323800:five_prime_UTR 30.0%
TCTAACATGTGTGTTAAACT+TGG - chr8_4:32445750-32445769 None:intergenic 30.0%
TATCTTGCAAGATGTAACAA+GGG - chr8_4:32445824-32445843 None:intergenic 30.0%
ATATCTTGCAAGATGTAACA+AGG - chr8_4:32445825-32445844 None:intergenic 30.0%
CGAAAGTAAAGAATTTGATC+TGG - chr8_4:32446000-32446019 None:intergenic 30.0%
!!! CTGATAACTCTTTTTTGCAT+AGG - chr8_4:32446063-32446082 None:intergenic 30.0%
TTTGGAAAGCTGAGAAAAAT+GGG - chr8_4:32446132-32446151 None:intergenic 30.0%
ATTTGGAAAGCTGAGAAAAA+TGG - chr8_4:32446133-32446152 None:intergenic 30.0%
GAAGAAACAATAGAACTTGA+CGG + chr8_4:32446362-32446381 Msa1323800:five_prime_UTR 30.0%
TAAAAGTGATGTTGTGAATC+AGG + chr8_4:32446394-32446413 Msa1323800:five_prime_UTR 30.0%
!! CCCTTTTGTTTGTACTTATA+TGG + chr8_4:32446473-32446492 Msa1323800:five_prime_UTR 30.0%
ACAGAAAGGCAATAAAACTT+TGG + chr8_4:32446508-32446527 Msa1323800:five_prime_UTR 30.0%
AATCTGTAAATAACTACCCT+TGG + chr8_4:32446549-32446568 Msa1323800:five_prime_UTR 30.0%
! GAATATTTACTCACAGCTTT+TGG + chr8_4:32446722-32446741 Msa1323800:five_prime_UTR 30.0%
! TTTCAAACTGTATTGGGTTT+TGG - chr8_4:32446777-32446796 None:intergenic 30.0%
AGATTCAGGTCTGTATTTAT+CGG - chr8_4:32446952-32446971 None:intergenic 30.0%
TGGGAACTATTACAGTTTAA+AGG + chr8_4:32446983-32447002 Msa1323800:CDS 30.0%
GGGAACTATTACAGTTTAAA+GGG + chr8_4:32446984-32447003 Msa1323800:CDS 30.0%
GGAACTATTACAGTTTAAAG+GGG + chr8_4:32446985-32447004 Msa1323800:CDS 30.0%
GATAGTTTCTGTTCAGTTTA+AGG - chr8_4:32447046-32447065 None:intergenic 30.0%
CAAAAAAGATTTAGAGAGGA+TGG + chr8_4:32447448-32447467 Msa1323800:CDS 30.0%
GTAAATATCTTAGACTCACA+GGG - chr8_4:32447598-32447617 None:intergenic 30.0%
TTGATTGAAATTTGAGAGTG+TGG - chr8_4:32447663-32447682 None:intergenic 30.0%
TAAATCATTCTTTCAGGAGA+GGG + chr8_4:32447711-32447730 Msa1323800:intron 30.0%
ACAGCAAAAAGTTTACTTAG+AGG + chr8_4:32447736-32447755 Msa1323800:CDS 30.0%
CAGCAAAAAGTTTACTTAGA+GGG + chr8_4:32447737-32447756 Msa1323800:CDS 30.0%
TACTTCATCAAGAGACATTA+GGG - chr8_4:32447814-32447833 None:intergenic 30.0%
TTTGAAGAGAAAAGGGTTAG+GGG - chr8_4:32440839-32440858 None:intergenic 35.0%
GATTTGAAGAGAAAAGGGTT+AGG - chr8_4:32440841-32440860 None:intergenic 35.0%
AACTGAGTTCAGTTAAGAGA+GGG - chr8_4:32440963-32440982 None:intergenic 35.0%
AGTTCTCCCTCATAATTGTT+GGG + chr8_4:32440979-32440998 Msa1323800:five_prime_UTR 35.0%
! TCAACTTGTGGGTTAATGTA+TGG + chr8_4:32441015-32441034 Msa1323800:five_prime_UTR 35.0%
AAACTTGAGGAAAGTGATAG+AGG + chr8_4:32441129-32441148 Msa1323800:five_prime_UTR 35.0%
ACATTCAATTCCCTTCAAAG+CGG + chr8_4:32441324-32441343 Msa1323800:five_prime_UTR 35.0%
TTGAAGTTGGATAATTCTGC+TGG + chr8_4:32441395-32441414 Msa1323800:five_prime_UTR 35.0%
TGGATAATTCTGCTGGAAAA+AGG + chr8_4:32441402-32441421 Msa1323800:five_prime_UTR 35.0%
TTGCGAAATGAGCTAAATTG+TGG + chr8_4:32441447-32441466 Msa1323800:five_prime_UTR 35.0%
! ATCGAAGTTTGGGATGAATT+CGG + chr8_4:32441526-32441545 Msa1323800:five_prime_UTR 35.0%
AAGCTGCAGTTAAGATGTTT+CGG + chr8_4:32441565-32441584 Msa1323800:five_prime_UTR 35.0%
!! GTTTCGGATAAAAGTGCTTA+CGG + chr8_4:32441581-32441600 Msa1323800:five_prime_UTR 35.0%
GTGACATGTTTGAGAAAAGT+AGG + chr8_4:32441729-32441748 Msa1323800:intron 35.0%
CTCAAAGCTATAATGAGTCA+TGG - chr8_4:32442183-32442202 None:intergenic 35.0%
AATTGCTTTCATGTGTATGG+AGG + chr8_4:32442208-32442227 Msa1323800:intron 35.0%
!! AGAAAGATTTTAGTCCTTGC+AGG + chr8_4:32442328-32442347 Msa1323800:intron 35.0%
AAGTGAATAAGAGTGAAGCA+TGG + chr8_4:32442417-32442436 Msa1323800:intron 35.0%
!! GCTACTCATTTCCATTTTTC+TGG - chr8_4:32442639-32442658 None:intergenic 35.0%
TTATCTCTCGTTGTAGCAAA+CGG - chr8_4:32442842-32442861 None:intergenic 35.0%
TAATGTAGTCTATGACGTAC+GGG + chr8_4:32442859-32442878 Msa1323800:intron 35.0%
TTATCTCTCGTTGTAGCAAA+CGG - chr8_4:32442842-32442861 None:intergenic 35.0%
ATAATGTAGCCTATGACGTA+CGG + chr8_4:32442922-32442941 Msa1323800:intron 35.0%
TTATCTCTCGTTGTAGCAAA+CGG - chr8_4:32442842-32442861 None:intergenic 35.0%
ATAATGTAGCCTATGAGGTA+CGG + chr8_4:32443050-32443069 Msa1323800:intron 35.0%
ATAATGTAGCCTATGAGGTA+CGG + chr8_4:32443050-32443069 Msa1323800:intron 35.0%
GCTACGAAGTAATAGTTCAT+GGG + chr8_4:32443328-32443347 Msa1323800:intron 35.0%
TAGCCGAAACTAGTTGTTAT+CGG + chr8_4:32443405-32443424 Msa1323800:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr8_4:32443622-32443641 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr8_4:32443634-32443653 None:intergenic 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr8_4:32443718-32443737 None:intergenic 35.0%
GGTAAGAAGAGTAGATCAAA+TGG - chr8_4:32443721-32443740 None:intergenic 35.0%
TTGATCTACTCTTCTTACCA+CGG + chr8_4:32443722-32443741 Msa1323800:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG - chr8_4:32443774-32443793 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - chr8_4:32443779-32443798 None:intergenic 35.0%
AGCACCTATAGTAGAAAAGT+TGG - chr8_4:32443799-32443818 None:intergenic 35.0%
AGACTAGACATGATAGGATT+AGG - chr8_4:32443851-32443870 None:intergenic 35.0%
AGCTGAAAGGAAAGTTCTAT+CGG - chr8_4:32443986-32444005 None:intergenic 35.0%
AACTTTCCTTTCAGCTTAAG+TGG + chr8_4:32443990-32444009 Msa1323800:intron 35.0%
TACATCATCGTATTCAAGCT+GGG - chr8_4:32444064-32444083 None:intergenic 35.0%
!! TTCTCCGTCATTTTGTACTA+TGG + chr8_4:32444097-32444116 Msa1323800:intron 35.0%
GTTACACGGTTTAGATATCT+TGG - chr8_4:32444125-32444144 None:intergenic 35.0%
GATATCTAAACCGTGTAACT+TGG + chr8_4:32444126-32444145 Msa1323800:intron 35.0%
TATCTAAACCGTGTAACTTG+GGG + chr8_4:32444128-32444147 Msa1323800:intron 35.0%
ATATCATACCCCAAGTTACA+CGG - chr8_4:32444139-32444158 None:intergenic 35.0%
ACTTCAGTAAAAGGAGAAGT+GGG - chr8_4:32444190-32444209 None:intergenic 35.0%
AACTTCAGTAAAAGGAGAAG+TGG - chr8_4:32444191-32444210 None:intergenic 35.0%
TAGAAACAAGACGGAGTATA+TGG - chr8_4:32444219-32444238 None:intergenic 35.0%
! TCTGCAAAAAGCATACATCT+CGG + chr8_4:32444332-32444351 Msa1323800:intron 35.0%
! GGAGATTTTCCCATAACAAT+AGG - chr8_4:32444440-32444459 None:intergenic 35.0%
!! ATCCTGGATAGCTCTAATAT+AGG + chr8_4:32444508-32444527 Msa1323800:intron 35.0%
!!! ACCAATTTGGTTTTATGCCT+GGG - chr8_4:32444697-32444716 None:intergenic 35.0%
!!! AACCAATTTGGTTTTATGCC+TGG - chr8_4:32444698-32444717 None:intergenic 35.0%
AAGAAAAGAGACTCACGTTA+CGG - chr8_4:32444723-32444742 None:intergenic 35.0%
GAGTCATACCATGAAGTTAT+GGG - chr8_4:32444768-32444787 None:intergenic 35.0%
TGAGTCATACCATGAAGTTA+TGG - chr8_4:32444769-32444788 None:intergenic 35.0%
ACAAGATTGCGCGAATTATA+GGG - chr8_4:32444804-32444823 None:intergenic 35.0%
TACAAGATTGCGCGAATTAT+AGG - chr8_4:32444805-32444824 None:intergenic 35.0%
TCCAATCTATAAGAACAAGG+GGG - chr8_4:32444831-32444850 None:intergenic 35.0%
TAACTATTATCGTCGGATTC+AGG - chr8_4:32445035-32445054 None:intergenic 35.0%
AGAGAGATATTAAGGATCGA+TGG - chr8_4:32445147-32445166 None:intergenic 35.0%
GAAGTGTATTAAGGATGAAG+AGG - chr8_4:32445188-32445207 None:intergenic 35.0%
CATCCTTAATACACTTCACT+TGG + chr8_4:32445191-32445210 Msa1323800:intron 35.0%
TCTATATACAAGCTTGCGAA+GGG - chr8_4:32445244-32445263 None:intergenic 35.0%
ATCTATATACAAGCTTGCGA+AGG - chr8_4:32445245-32445264 None:intergenic 35.0%
ATACCAATCTTTAGGTACCA+AGG - chr8_4:32445278-32445297 None:intergenic 35.0%
CATAAACATAGCTAGGAAAG+AGG - chr8_4:32445347-32445366 None:intergenic 35.0%
!! TATAAACCCAAAATGGGTTG+AGG + chr8_4:32445464-32445483 Msa1323800:intron 35.0%
! TTCTAACCTCAACCCATTTT+GGG - chr8_4:32445473-32445492 None:intergenic 35.0%
! TTTCTAACCTCAACCCATTT+TGG - chr8_4:32445474-32445493 None:intergenic 35.0%
CTACTGATGTGTACTTTACA+TGG - chr8_4:32445654-32445673 None:intergenic 35.0%
TGTAAAGTACACATCAGTAG+AGG + chr8_4:32445654-32445673 Msa1323800:five_prime_UTR 35.0%
TACACATCAGTAGAGGTAAT+AGG + chr8_4:32445661-32445680 Msa1323800:intron 35.0%
! TTTTCGATTGTCCAAAAGCT+AGG - chr8_4:32445867-32445886 None:intergenic 35.0%
CTCTATCAAGTAATCTAGCA+CGG + chr8_4:32445948-32445967 Msa1323800:intron 35.0%
TCTATCAAGTAATCTAGCAC+GGG + chr8_4:32445949-32445968 Msa1323800:intron 35.0%
ATTTGATCTGGGGAATTTGT+CGG - chr8_4:32445988-32446007 None:intergenic 35.0%
!!! TAACTCTTTTTTGCATAGGC+CGG - chr8_4:32446059-32446078 None:intergenic 35.0%
! ACTCTGTTAAGAGTGCATAT+TGG - chr8_4:32446105-32446124 None:intergenic 35.0%
!! ACAACATCACTTTTACCAAG+AGG - chr8_4:32446389-32446408 None:intergenic 35.0%
! AGGAGTTGATTTCATTAGAG+AGG + chr8_4:32446414-32446433 Msa1323800:five_prime_UTR 35.0%
! GGAGTTGATTTCATTAGAGA+GGG + chr8_4:32446415-32446434 Msa1323800:five_prime_UTR 35.0%
TAAATAACTACCCTTGGAAC+TGG + chr8_4:32446555-32446574 Msa1323800:five_prime_UTR 35.0%
GTCTTAATCTCAGTAGTCAT+TGG + chr8_4:32446630-32446649 Msa1323800:five_prime_UTR 35.0%
CTATATTTGAAGAACTGCTG+AGG + chr8_4:32446816-32446835 Msa1323800:five_prime_UTR 35.0%
TTCCTTAGCATATAGCACAT+TGG - chr8_4:32446879-32446898 None:intergenic 35.0%
ACAGAAACTATCTATCTGCT+TGG + chr8_4:32447054-32447073 Msa1323800:CDS 35.0%
! AGGGCATCAAATTGTAATGA+CGG + chr8_4:32447350-32447369 Msa1323800:CDS 35.0%
ACTCGTCTTCTTGATTATAC+TGG + chr8_4:32447572-32447591 Msa1323800:CDS 35.0%
GGTAAATATCTTAGACTCAC+AGG - chr8_4:32447599-32447618 None:intergenic 35.0%
CTAAATCATTCTTTCAGGAG+AGG + chr8_4:32447710-32447729 Msa1323800:intron 35.0%
GTACTTCATCAAGAGACATT+AGG - chr8_4:32447815-32447834 None:intergenic 35.0%
! TGTGCTGCATTCTTCAATTT+TGG + chr8_4:32447842-32447861 Msa1323800:three_prime_UTR 35.0%
TAGTGTTGCATCAGAACTAA+TGG + chr8_4:32447885-32447904 Msa1323800:three_prime_UTR 35.0%
CAAGAGAAAGAAGAGAACAG+AGG - chr8_4:32440813-32440832 None:intergenic 40.0%
GAACTGAGTTCAGTTAAGAG+AGG - chr8_4:32440964-32440983 None:intergenic 40.0%
CAGTTCTCCCTCATAATTGT+TGG + chr8_4:32440978-32440997 Msa1323800:five_prime_UTR 40.0%
GTTCTCCCTCATAATTGTTG+GGG + chr8_4:32440980-32440999 Msa1323800:five_prime_UTR 40.0%
! TGTGCTTGAAGCTTTAGTCA+TGG + chr8_4:32441038-32441057 Msa1323800:five_prime_UTR 40.0%
GGGTGTTAAGCAAAAACTTG+AGG + chr8_4:32441116-32441135 Msa1323800:five_prime_UTR 40.0%
! TTTGGACAAGCTGTGTGTTT+TGG + chr8_4:32441226-32441245 Msa1323800:five_prime_UTR 40.0%
! TTGGACAAGCTGTGTGTTTT+GGG + chr8_4:32441227-32441246 Msa1323800:five_prime_UTR 40.0%
TTCTGCTGGAAAAAGGCTTA+CGG + chr8_4:32441409-32441428 Msa1323800:five_prime_UTR 40.0%
CGGAGACTTCAGAAATGTTA+AGG + chr8_4:32441639-32441658 Msa1323800:five_prime_UTR 40.0%
CGCATGAGTCTTTATAGTTG+AGG + chr8_4:32441892-32441911 Msa1323800:intron 40.0%
AAACAGGACAGAACATGCAA+TGG + chr8_4:32442489-32442508 Msa1323800:intron 40.0%
ACTGTGAGCATGTTACTCAT+AGG - chr8_4:32442601-32442620 None:intergenic 40.0%
TACTATGACACGTACGTCAT+AGG - chr8_4:32442934-32442953 None:intergenic 40.0%
TAATGTAGCCTATGACGTAC+GGG + chr8_4:32442923-32442942 Msa1323800:intron 40.0%
GAGAGATAATGTAGCCTATG+AGG + chr8_4:32442917-32442936 Msa1323800:intron 40.0%
GAGAGATAATGTAGCCTATG+AGG + chr8_4:32442917-32442936 Msa1323800:intron 40.0%
GGCTACGAAGTAATAGTTCA+TGG + chr8_4:32443327-32443346 Msa1323800:intron 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - chr8_4:32443693-32443712 None:intergenic 40.0%
ACATCATTAGAGAGAGAGTG+GGG - chr8_4:32443824-32443843 None:intergenic 40.0%
GACATCATTAGAGAGAGAGT+GGG - chr8_4:32443825-32443844 None:intergenic 40.0%
TGACATCATTAGAGAGAGAG+TGG - chr8_4:32443826-32443845 None:intergenic 40.0%
GTGGTAAGACTAGACATGAT+AGG - chr8_4:32443857-32443876 None:intergenic 40.0%
! AAGGTACCACTTAAGCTGAA+AGG - chr8_4:32443999-32444018 None:intergenic 40.0%
GTACATCATCGTATTCAAGC+TGG - chr8_4:32444065-32444084 None:intergenic 40.0%
GGGTCCATAGTACAAAATGA+CGG - chr8_4:32444104-32444123 None:intergenic 40.0%
ATCTCCAACTTTCACCTCTA+AGG + chr8_4:32444160-32444179 Msa1323800:intron 40.0%
TCTACCTTAGAGGTGAAAGT+TGG - chr8_4:32444167-32444186 None:intergenic 40.0%
TAACAATAGGACTGCACCAA+GGG - chr8_4:32444427-32444446 None:intergenic 40.0%
ATAACAATAGGACTGCACCA+AGG - chr8_4:32444428-32444447 None:intergenic 40.0%
TTGGTGCAGTCCTATTGTTA+TGG + chr8_4:32444427-32444446 Msa1323800:intron 40.0%
TGGTGCAGTCCTATTGTTAT+GGG + chr8_4:32444428-32444447 Msa1323800:intron 40.0%
GCTATCCAGGATATGTATGA+GGG - chr8_4:32444500-32444519 None:intergenic 40.0%
AGCTATCCAGGATATGTATG+AGG - chr8_4:32444501-32444520 None:intergenic 40.0%
TGCCTATATTAGAGCTATCC+AGG - chr8_4:32444513-32444532 None:intergenic 40.0%
GCTTTCCACAAAATCTCTCT+AGG + chr8_4:32444557-32444576 Msa1323800:intron 40.0%
! GAGTACCTAGAGAGATTTTG+TGG - chr8_4:32444565-32444584 None:intergenic 40.0%
!!! AATTTGGTTTTATGCCTGGG+AGG - chr8_4:32444694-32444713 None:intergenic 40.0%
TCCCAGGCATAAAACCAAAT+TGG + chr8_4:32444693-32444712 Msa1323800:intron 40.0%
CACGTTACGGATAACCAATT+TGG - chr8_4:32444710-32444729 None:intergenic 40.0%
TACCATGAAGTTATGGGAGA+GGG - chr8_4:32444762-32444781 None:intergenic 40.0%
ATACCATGAAGTTATGGGAG+AGG - chr8_4:32444763-32444782 None:intergenic 40.0%
CAAGATTGCGCGAATTATAG+GGG - chr8_4:32444803-32444822 None:intergenic 40.0%
TCCCCCTTGTTCTTATAGAT+TGG + chr8_4:32444827-32444846 Msa1323800:intron 40.0%
ATCGAAGTGTGGAAAAGTCT+TGG - chr8_4:32444944-32444963 None:intergenic 40.0%
! AGACTTTTCCACACTTCGAT+AGG + chr8_4:32444944-32444963 Msa1323800:intron 40.0%
ACAACATACCTATCGAAGTG+TGG - chr8_4:32444955-32444974 None:intergenic 40.0%
ACTTCGATAGGTATGTTGTC+CGG + chr8_4:32444956-32444975 Msa1323800:intron 40.0%
GAAAAGGATGAGTAATGGCA+AGG - chr8_4:32444990-32445009 None:intergenic 40.0%
GCGTTGAAAAGGATGAGTAA+TGG - chr8_4:32444995-32445014 None:intergenic 40.0%
!! AGGTGAAAGAAGCGTTGAAA+AGG - chr8_4:32445006-32445025 None:intergenic 40.0%
TAACAGGTTAGACATCAGAG+AGG - chr8_4:32445071-32445090 None:intergenic 40.0%
ATGTCTAACCTGTTAGAGTC+TGG + chr8_4:32445076-32445095 Msa1323800:intron 40.0%
AGATCTTACCAGACTCTAAC+AGG - chr8_4:32445087-32445106 None:intergenic 40.0%
GGTGCAAGAGAGAGATATTA+AGG - chr8_4:32445155-32445174 None:intergenic 40.0%
GGACCAAGTGAAGTGTATTA+AGG - chr8_4:32445197-32445216 None:intergenic 40.0%
TAATACACTTCACTTGGTCC+AGG + chr8_4:32445197-32445216 Msa1323800:intron 40.0%
AATCTTTAGGTACCAAGGAG+GGG - chr8_4:32445273-32445292 None:intergenic 40.0%
CAATCTTTAGGTACCAAGGA+GGG - chr8_4:32445274-32445293 None:intergenic 40.0%
TAGAAACAGATGGTGATCCT+AGG + chr8_4:32445488-32445507 Msa1323800:intron 40.0%
TTCCATCTATCCTAGGTTGT+AGG - chr8_4:32445527-32445546 None:intergenic 40.0%
CAAAAGCTAGGAATGTTTGG+AGG - chr8_4:32445855-32445874 None:intergenic 40.0%
!! CTCCAAACATTCCTAGCTTT+TGG + chr8_4:32445853-32445872 Msa1323800:intron 40.0%
GTCCAAAAGCTAGGAATGTT+TGG - chr8_4:32445858-32445877 None:intergenic 40.0%
CGTGCTAGATTACTTGATAG+AGG - chr8_4:32445950-32445969 None:intergenic 40.0%
TTTGATCTGGGGAATTTGTC+GGG - chr8_4:32445987-32446006 None:intergenic 40.0%
!!! AACTCTTTTTTGCATAGGCC+GGG - chr8_4:32446058-32446077 None:intergenic 40.0%
! TGCATATTGGTTGTGTATGG+AGG - chr8_4:32446092-32446111 None:intergenic 40.0%
! GAGTGCATATTGGTTGTGTA+TGG - chr8_4:32446095-32446114 None:intergenic 40.0%
TGGAGGAGGACAAACTTATT+TGG - chr8_4:32446150-32446169 None:intergenic 40.0%
TCCTCCACTTGTCGAAATAA+CGG + chr8_4:32446163-32446182 Msa1323800:intron 40.0%
! AATGCCGTTATTTCGACAAG+TGG - chr8_4:32446170-32446189 None:intergenic 40.0%
! CCTGTAAGAAGTACAAAGCA+TGG - chr8_4:32446322-32446341 None:intergenic 40.0%
CCATGCTTTGTACTTCTTAC+AGG + chr8_4:32446319-32446338 Msa1323800:intron 40.0%
TGCTTTGTACTTCTTACAGG+CGG + chr8_4:32446322-32446341 Msa1323800:intron 40.0%
GGTCTCGTACTTAAACAGAA+AGG + chr8_4:32446494-32446513 Msa1323800:five_prime_UTR 40.0%
! GATATCAACGGAAGTGCATA+AGG - chr8_4:32446603-32446622 None:intergenic 40.0%
TCTCAGTAGTCATTGGATGA+AGG + chr8_4:32446637-32446656 Msa1323800:five_prime_UTR 40.0%
! TTTTGGCAATTTGAGCTTGG+AGG - chr8_4:32446760-32446779 None:intergenic 40.0%
TCCATATAGAGTGGATGACA+TGG + chr8_4:32446844-32446863 Msa1323800:five_prime_UTR 40.0%
TCCATGTCATCCACTCTATA+TGG - chr8_4:32446848-32446867 None:intergenic 40.0%
CTCCAATGTGCTATATGCTA+AGG + chr8_4:32446874-32446893 Msa1323800:five_prime_UTR 40.0%
CCATGGATACTTTATGAGCA+AGG - chr8_4:32446922-32446941 None:intergenic 40.0%
! CCTTGCTCATAAAGTATCCA+TGG + chr8_4:32446919-32446938 Msa1323800:five_prime_UTR 40.0%
TATTTATCGGTCATGGTCCA+TGG - chr8_4:32446939-32446958 None:intergenic 40.0%
AGGTCTGTATTTATCGGTCA+TGG - chr8_4:32446946-32446965 None:intergenic 40.0%
TCTATCTGCTTGGACACTTA+TGG + chr8_4:32447064-32447083 Msa1323800:CDS 40.0%
CTATCTGCTTGGACACTTAT+GGG + chr8_4:32447065-32447084 Msa1323800:CDS 40.0%
TATATCAACAGCCTGACGAT+AGG - chr8_4:32447135-32447154 None:intergenic 40.0%
GTCAGGCTGTTGATATAGAT+CGG + chr8_4:32447138-32447157 Msa1323800:CDS 40.0%
!!! AGATGATGGGTAAGCCTTTT+TGG + chr8_4:32447201-32447220 Msa1323800:CDS 40.0%
!!! GATGATGGGTAAGCCTTTTT+GGG + chr8_4:32447202-32447221 Msa1323800:CDS 40.0%
! AAGTAATGAAGCGCCCAAAA+AGG - chr8_4:32447218-32447237 None:intergenic 40.0%
TCTATCAGCCAAATGATTCC+CGG + chr8_4:32447252-32447271 Msa1323800:CDS 40.0%
ATTGACAACCGGGAATCATT+TGG - chr8_4:32447263-32447282 None:intergenic 40.0%
! AGGCGATAAAGTGTTACAGA+AGG + chr8_4:32447330-32447349 Msa1323800:CDS 40.0%
! GGCGATAAAGTGTTACAGAA+GGG + chr8_4:32447331-32447350 Msa1323800:CDS 40.0%
AGTAAAATGCTGCCTCTTCA+TGG - chr8_4:32447427-32447446 None:intergenic 40.0%
ATGGAATCTGAAGAGAGGAA+TGG + chr8_4:32447467-32447486 Msa1323800:CDS 40.0%
GAGAAGATTTGAAGAAGCAG+AGG + chr8_4:32447541-32447560 Msa1323800:CDS 40.0%
! ACAATCTAGTTTCCCTCCAT+TGG + chr8_4:32447771-32447790 Msa1323800:CDS 40.0%
AGTGATCAACATCCAATGGA+GGG - chr8_4:32447786-32447805 None:intergenic 40.0%
AAGTGATCAACATCCAATGG+AGG - chr8_4:32447787-32447806 None:intergenic 40.0%
GGAAAGTGATCAACATCCAA+TGG - chr8_4:32447790-32447809 None:intergenic 40.0%
TTCATCAAGAGACATTAGGG+AGG - chr8_4:32447811-32447830 None:intergenic 40.0%
AGTGTTCTCTGTTGTGTGAG+AGG - chr8_4:32440789-32440808 None:intergenic 45.0%
! GTCGTGATCTGTTTTGTGTG+TGG + chr8_4:32441249-32441268 Msa1323800:five_prime_UTR 45.0%
! TCGGAAAGTGCGTTTGAAGT+TGG + chr8_4:32441382-32441401 Msa1323800:five_prime_UTR 45.0%
TCTGCTGGAAAAAGGCTTAC+GGG + chr8_4:32441410-32441429 Msa1323800:five_prime_UTR 45.0%
TTGAGTCCTAATGAAGCTCC+CGG - chr8_4:32441613-32441632 None:intergenic 45.0%
ACAAGTATGCATGAGGGAGA+GGG - chr8_4:32441763-32441782 None:intergenic 45.0%
TACAAGTATGCATGAGGGAG+AGG - chr8_4:32441764-32441783 None:intergenic 45.0%
TACTATGACCCGTACGTCAT+AGG - chr8_4:32442870-32442889 None:intergenic 45.0%
TACTATGAGCCGTACCTCAT+AGG - chr8_4:32443062-32443081 None:intergenic 45.0%
TACTATGAGCCGTACCTCAT+AGG - chr8_4:32443062-32443081 None:intergenic 45.0%
CTAGTTTCGGCTAACTAAGC+CGG - chr8_4:32443398-32443417 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr8_4:32443552-32443571 Msa1323800:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr8_4:32443553-32443572 Msa1323800:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - chr8_4:32443699-32443718 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG - chr8_4:32443709-32443728 None:intergenic 45.0%
CATCATTAGAGAGAGAGTGG+GGG - chr8_4:32443823-32443842 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG - chr8_4:32443904-32443923 None:intergenic 45.0%
CGCTTACTTTACTCTCGTGT+TGG + chr8_4:32443907-32443926 Msa1323800:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG - chr8_4:32443943-32443962 None:intergenic 45.0%
TGTTGTATGGTACGGAGTGT+TGG - chr8_4:32443944-32443963 None:intergenic 45.0%
TCCGTACCATACAACATTGC+CGG + chr8_4:32443948-32443967 Msa1323800:intron 45.0%
ACCGGCAATGTTGTATGGTA+CGG - chr8_4:32443952-32443971 None:intergenic 45.0%
AGGTGTGTTGTGCGATAAGA+AGG - chr8_4:32444018-32444037 None:intergenic 45.0%
TTGAAATGGAGAAGAGCCTC+AGG - chr8_4:32444038-32444057 None:intergenic 45.0%
TTCAAGCTGGGTGGTTGAAA+TGG - chr8_4:32444052-32444071 None:intergenic 45.0%
ATCATCGTATTCAAGCTGGG+TGG - chr8_4:32444061-32444080 None:intergenic 45.0%
!! ACTCCGTCTTGTTTCTACTC+AGG + chr8_4:32444222-32444241 Msa1323800:intron 45.0%
TAAATGGGAGGCTAGAGACT+TGG - chr8_4:32444277-32444296 None:intergenic 45.0%
AGTCGAGGGAGGAGTTAAAT+GGG - chr8_4:32444292-32444311 None:intergenic 45.0%
! GCAGATGATGTAGTCTTGCT+TGG - chr8_4:32444317-32444336 None:intergenic 45.0%
!! TACATCTCGGTGCTAACTCT+TGG + chr8_4:32444345-32444364 Msa1323800:intron 45.0%
! AGAGATTTTGTGGAAAGCCC+TGG - chr8_4:32444555-32444574 None:intergenic 45.0%
TACCCTCTCCCATAACTTCA+TGG + chr8_4:32444757-32444776 Msa1323800:intron 45.0%
TGGAAAAGTCTTGGCGATAG+AGG - chr8_4:32444935-32444954 None:intergenic 45.0%
TGAGTAATGGCAAGGCAGTT+GGG - chr8_4:32444982-32445001 None:intergenic 45.0%
ATGAGTAATGGCAAGGCAGT+TGG - chr8_4:32444983-32445002 None:intergenic 45.0%
! GGATGAAGAGGGTAGAGTTT+TGG - chr8_4:32445176-32445195 None:intergenic 45.0%
AGAACGAAAGACAAGAGACC+TGG - chr8_4:32445218-32445237 None:intergenic 45.0%
TATAGATTTCTCCCCCTCCT+TGG + chr8_4:32445258-32445277 Msa1323800:intron 45.0%
ATCTTTAGGTACCAAGGAGG+GGG - chr8_4:32445272-32445291 None:intergenic 45.0%
CCAATCTTTAGGTACCAAGG+AGG - chr8_4:32445275-32445294 None:intergenic 45.0%
CCTCCTTGGTACCTAAAGAT+TGG + chr8_4:32445272-32445291 Msa1323800:intron 45.0%
GCGAGAACTCAAGCATTTGA+AGG - chr8_4:32445304-32445323 None:intergenic 45.0%
TAGGAAAGAGGCTAAGAAGG+CGG - chr8_4:32445335-32445354 None:intergenic 45.0%
AGCTAGGAAAGAGGCTAAGA+AGG - chr8_4:32445338-32445357 None:intergenic 45.0%
GGGTTGAGGTTAGAAACAGA+TGG + chr8_4:32445478-32445497 Msa1323800:intron 45.0%
TGCCTACAACCTAGGATAGA+TGG + chr8_4:32445522-32445541 Msa1323800:intron 45.0%
CAGTGAGTTCCATCTATCCT+AGG - chr8_4:32445534-32445553 None:intergenic 45.0%
GATGAAGAAGCAGACATAGC+TGG + chr8_4:32445627-32445646 Msa1323800:five_prime_UTR 45.0%
TCAAGTAATCTAGCACGGGT+TGG + chr8_4:32445953-32445972 Msa1323800:intron 45.0%
TTGATCTGGGGAATTTGTCG+GGG - chr8_4:32445986-32446005 None:intergenic 45.0%
CAAATACCTGTCCAATAGCC+CGG + chr8_4:32446037-32446056 Msa1323800:intron 45.0%
! GTTATTTCGACAAGTGGAGG+AGG - chr8_4:32446164-32446183 None:intergenic 45.0%
GCTTTGTACTTCTTACAGGC+GGG + chr8_4:32446323-32446342 Msa1323800:intron 45.0%
! ATAGAACTTGACGGACCTCT+TGG + chr8_4:32446371-32446390 Msa1323800:five_prime_UTR 45.0%
TTTGGCACGTACAGTTCTTG+TGG + chr8_4:32446526-32446545 Msa1323800:five_prime_UTR 45.0%
TCCATGCATTCCAGTTCCAA+GGG - chr8_4:32446568-32446587 None:intergenic 45.0%
! CCTTAGTTCTTGGTAGAGAC+TGG - chr8_4:32446675-32446694 None:intergenic 45.0%
CCAGTCTCTACCAAGAACTA+AGG + chr8_4:32446672-32446691 Msa1323800:five_prime_UTR 45.0%
! CGCTATGCATCCTTAGTTCT+TGG - chr8_4:32446685-32446704 None:intergenic 45.0%
!! GGGTTTTGGCAATTTGAGCT+TGG - chr8_4:32446763-32446782 None:intergenic 45.0%
GAGGACTGATCCATATAGAG+TGG + chr8_4:32446835-32446854 Msa1323800:five_prime_UTR 45.0%
AGGACAAGCTTACGAGATGA+TGG + chr8_4:32447187-32447206 Msa1323800:CDS 45.0%
GGACAAGCTTACGAGATGAT+GGG + chr8_4:32447188-32447207 Msa1323800:CDS 45.0%
TTCCCGGTTGTCAATTGCAA+TGG + chr8_4:32447268-32447287 Msa1323800:CDS 45.0%
AGCCATTGCAATTGACAACC+GGG - chr8_4:32447273-32447292 None:intergenic 45.0%
GAGCCATTGCAATTGACAAC+CGG - chr8_4:32447274-32447293 None:intergenic 45.0%
CTGAATGCAGCTTTCCAAGT+TGG - chr8_4:32447394-32447413 None:intergenic 45.0%
AGAGGATGGAATCTGAAGAG+AGG + chr8_4:32447462-32447481 Msa1323800:CDS 45.0%
AGAGAGGAATGGACCTAACA+TGG + chr8_4:32447478-32447497 Msa1323800:CDS 45.0%
GAATGGACCTAACATGGTTG+AGG + chr8_4:32447484-32447503 Msa1323800:CDS 45.0%
AGCAAAGCCTCAACCATGTT+AGG - chr8_4:32447494-32447513 None:intergenic 45.0%
!! AACAAAAAAAAAAAAAATTA+TGG + chr8_4:32443217-32443236 Msa1323800:intron 5.0%
! AAAGTGCTTACGGAGCACAC+CGG + chr8_4:32441591-32441610 Msa1323800:five_prime_UTR 50.0%
TCATTAGGACTCAAGCAGCG+CGG + chr8_4:32441619-32441638 Msa1323800:five_prime_UTR 50.0%
TATGCATGAGGGAGAGGGAA+TGG - chr8_4:32441758-32441777 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr8_4:32443554-32443573 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr8_4:32443551-32443570 Msa1323800:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr8_4:32443557-32443576 Msa1323800:intron 50.0%
CTTCTTACCACGGCGTCTAT+TGG + chr8_4:32443732-32443751 Msa1323800:intron 50.0%
AGGATGTTGCGTTGGATGAG+TGG - chr8_4:32443876-32443895 None:intergenic 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG - chr8_4:32443896-32443915 None:intergenic 50.0%
GTCAGACCGGCAATGTTGTA+TGG - chr8_4:32443957-32443976 None:intergenic 50.0%
CTTATCGCACAACACACCTG+AGG + chr8_4:32444019-32444038 Msa1323800:intron 50.0%
GAGAAGTGGGTCTACCTTAG+AGG - chr8_4:32444177-32444196 None:intergenic 50.0%
CCGCCTGAGTAGAAACAAGA+CGG - chr8_4:32444228-32444247 None:intergenic 50.0%
!! CCGTCTTGTTTCTACTCAGG+CGG + chr8_4:32444225-32444244 Msa1323800:intron 50.0%
GCGGAAACCATACGCTTCTA+AGG + chr8_4:32444244-32444263 Msa1323800:intron 50.0%
! AGGCAAGCCTTAGAAGCGTA+TGG - chr8_4:32444254-32444273 None:intergenic 50.0%
GAGTCGAGGGAGGAGTTAAA+TGG - chr8_4:32444293-32444312 None:intergenic 50.0%
! AGTCTTGCTTGGTGAGTCGA+GGG - chr8_4:32444306-32444325 None:intergenic 50.0%
! TAGTCTTGCTTGGTGAGTCG+AGG - chr8_4:32444307-32444326 None:intergenic 50.0%
AAGGACTTAGGGTTGACCCT+TGG + chr8_4:32444408-32444427 Msa1323800:intron 50.0%
AAGCGCCCTCATACATATCC+TGG + chr8_4:32444492-32444511 Msa1323800:intron 50.0%
GAAAGCCCTGGAGAAGAAAG+GGG - chr8_4:32444543-32444562 None:intergenic 50.0%
GGAAAGCCCTGGAGAAGAAA+GGG - chr8_4:32444544-32444563 None:intergenic 50.0%
TGGAAAGCCCTGGAGAAGAA+AGG - chr8_4:32444545-32444564 None:intergenic 50.0%
CTACTTACTTCGACGCGTGA+TGG - chr8_4:32444654-32444673 None:intergenic 50.0%
CGAAGAAAATGCCAGACGAG+TGG - chr8_4:32444871-32444890 None:intergenic 50.0%
GTCTTGGCGATAGAGGAGTT+GGG - chr8_4:32444928-32444947 None:intergenic 50.0%
AGTCTTGGCGATAGAGGAGT+TGG - chr8_4:32444929-32444948 None:intergenic 50.0%
TAGACATCAGAGAGGAGGAC+CGG - chr8_4:32445063-32445082 None:intergenic 50.0%
CAGGTTAGACATCAGAGAGG+AGG - chr8_4:32445068-32445087 None:intergenic 50.0%
CTAGGTTGTAGGCAACCTCA+GGG - chr8_4:32445516-32445535 None:intergenic 50.0%
CCTCTGTGTGCGTTATGTGA+CGG - chr8_4:32445916-32445935 None:intergenic 50.0%
TGATCTGGGGAATTTGTCGG+GGG - chr8_4:32445985-32446004 None:intergenic 50.0%
CGGGCTATTGGACAGGTATT+TGG - chr8_4:32446039-32446058 None:intergenic 50.0%
! TTTTGCATAGGCCGGGCTAT+TGG - chr8_4:32446051-32446070 None:intergenic 50.0%
! GCCGTTATTTCGACAAGTGG+AGG - chr8_4:32446167-32446186 None:intergenic 50.0%
ACCCTTGGAACTGGAATGCA+TGG + chr8_4:32446564-32446583 Msa1323800:five_prime_UTR 50.0%
GTCCATGCATTCCAGTTCCA+AGG - chr8_4:32446569-32446588 None:intergenic 50.0%
CGTGATTACCGTGCTTGGTA+TGG + chr8_4:32447161-32447180 Msa1323800:CDS 50.0%
TACCGTGCTTGGTATGGACT+AGG + chr8_4:32447167-32447186 Msa1323800:CDS 50.0%
GTCCTAGTCCATACCAAGCA+CGG - chr8_4:32447172-32447191 None:intergenic 50.0%
CCTCATCGAGCATGTGAATC+TGG - chr8_4:32447313-32447332 None:intergenic 50.0%
CCAGATTCACATGCTCGATG+AGG + chr8_4:32447310-32447329 Msa1323800:CDS 50.0%
GCAATTGCTACGCACCAACT+TGG + chr8_4:32447377-32447396 Msa1323800:CDS 50.0%
TGGAAAGCTGCATTCAGAGC+TGG + chr8_4:32447397-32447416 Msa1323800:CDS 50.0%
GGAAAGCTGCATTCAGAGCT+GGG + chr8_4:32447398-32447417 Msa1323800:CDS 50.0%
AAGTGCTTACGGAGCACACC+GGG + chr8_4:32441592-32441611 Msa1323800:five_prime_UTR 55.0%
AGCACACCGGGAGCTTCATT+AGG + chr8_4:32441604-32441623 Msa1323800:five_prime_UTR 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr8_4:32443559-32443578 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr8_4:32443565-32443584 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr8_4:32443566-32443585 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr8_4:32443565-32443584 Msa1323800:intron 55.0%
GAGAAGACCAATAGACGCCG+TGG - chr8_4:32443742-32443761 None:intergenic 55.0%
CGGAGATGAGGATGTTGCGT+TGG - chr8_4:32443884-32443903 None:intergenic 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG - chr8_4:32443940-32443959 None:intergenic 55.0%
CTATCGGACAGCAGTCAGAC+CGG - chr8_4:32443970-32443989 None:intergenic 55.0%
ATGGGAGGCTAGAGACTTGG+AGG - chr8_4:32444274-32444293 None:intergenic 55.0%
CGAGGGAGGAGTTAAATGGG+AGG - chr8_4:32444289-32444308 None:intergenic 55.0%
TAGTGTGAGGACGCAGGATG+GGG - chr8_4:32444468-32444487 None:intergenic 55.0%
CTAGTGTGAGGACGCAGGAT+GGG - chr8_4:32444469-32444488 None:intergenic 55.0%
ACTAGTGTGAGGACGCAGGA+TGG - chr8_4:32444470-32444489 None:intergenic 55.0%
TTCGACTAGTGTGAGGACGC+AGG - chr8_4:32444474-32444493 None:intergenic 55.0%
TCCTCACCCCTTTCTTCTCC+AGG + chr8_4:32444534-32444553 Msa1323800:intron 55.0%
CCTCACCCCTTTCTTCTCCA+GGG + chr8_4:32444535-32444554 Msa1323800:intron 55.0%
! CGTGATGGAGCGATATCGGA+CGG - chr8_4:32444639-32444658 None:intergenic 55.0%
! GACGCGTGATGGAGCGATAT+CGG - chr8_4:32444643-32444662 None:intergenic 55.0%
TATGCCTGGGAGGTCGACTA+TGG - chr8_4:32444684-32444703 None:intergenic 55.0%
GTGCTTCTTCTCCACTCGTC+TGG + chr8_4:32444857-32444876 Msa1323800:intron 55.0%
TTGGCGATAGAGGAGTTGGG+TGG - chr8_4:32444925-32444944 None:intergenic 55.0%
TAATGGCAAGGCAGTTGGGC+CGG - chr8_4:32444978-32444997 None:intergenic 55.0%
TGGTGATCCTAGGTTCCCTG+AGG + chr8_4:32445498-32445517 Msa1323800:intron 55.0%
TAGGCAACCTCAGGGAACCT+AGG - chr8_4:32445508-32445527 None:intergenic 55.0%
CCTAGGTTGTAGGCAACCTC+AGG - chr8_4:32445517-32445536 None:intergenic 55.0%
CCTGAGGTTGCCTACAACCT+AGG + chr8_4:32445514-32445533 Msa1323800:intron 55.0%
CCGTCACATAACGCACACAG+AGG + chr8_4:32445913-32445932 Msa1323800:intron 55.0%
GGCGGGAGAAAAGCGAAAAG+AGG + chr8_4:32446340-32446359 Msa1323800:intron 55.0%
! AAAAACACGGGCGCTGCTGT+GGG + chr8_4:32447107-32447126 Msa1323800:CDS 55.0%
ATCGGCGTGATTACCGTGCT+TGG + chr8_4:32447156-32447175 Msa1323800:CDS 55.0%
AGAGCTGGGACACCATGAAG+AGG + chr8_4:32447412-32447431 Msa1323800:CDS 55.0%
! CTTGCTTGGTGAGTCGAGGG+AGG - chr8_4:32444303-32444322 None:intergenic 60.0%
AGGACGCAGGATGGGGATAC+CGG - chr8_4:32444461-32444480 None:intergenic 60.0%
! AGGGCGCTTCGACTAGTGTG+AGG - chr8_4:32444481-32444500 None:intergenic 60.0%
CCCTGGAGAAGAAAGGGGTG+AGG - chr8_4:32444538-32444557 None:intergenic 60.0%
GCTTCCATAGTCGACCTCCC+AGG + chr8_4:32444677-32444696 Msa1323800:intron 60.0%
! TCGTCGGATTCAGGAGCACG+AGG - chr8_4:32445026-32445045 None:intergenic 60.0%
CATAGGCCGGGCTATTGGAC+AGG - chr8_4:32446046-32446065 None:intergenic 60.0%
! GAAAAACACGGGCGCTGCTG+TGG + chr8_4:32447106-32447125 Msa1323800:CDS 60.0%
TGCTGTGGGTGCCTATCGTC+AGG + chr8_4:32447121-32447140 Msa1323800:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 32440786 32448014 32440786 ID=Msa1323800;Name=Msa1323800
chr8_4 mRNA 32440786 32448014 32440786 ID=Msa1323800-mRNA-1;Parent=Msa1323800;Name=Msa1323800-mRNA-1;_AED=0.07;_eAED=0.07;_QI=1561|1|1|1|0.33|0.25|4|198|247
chr8_4 exon 32440786 32441660 32440786 ID=Msa1323800-mRNA-1:exon:10545;Parent=Msa1323800-mRNA-1
chr8_4 exon 32445594 32445675 32445594 ID=Msa1323800-mRNA-1:exon:10546;Parent=Msa1323800-mRNA-1
chr8_4 exon 32446341 32447598 32446341 ID=Msa1323800-mRNA-1:exon:10547;Parent=Msa1323800-mRNA-1
chr8_4 exon 32447727 32448014 32447727 ID=Msa1323800-mRNA-1:exon:10548;Parent=Msa1323800-mRNA-1
chr8_4 five_prime_UTR 32440786 32441660 32440786 ID=Msa1323800-mRNA-1:five_prime_utr;Parent=Msa1323800-mRNA-1
chr8_4 five_prime_UTR 32445594 32445675 32445594 ID=Msa1323800-mRNA-1:five_prime_utr;Parent=Msa1323800-mRNA-1
chr8_4 five_prime_UTR 32446341 32446944 32446341 ID=Msa1323800-mRNA-1:five_prime_utr;Parent=Msa1323800-mRNA-1
chr8_4 CDS 32446945 32447598 32446945 ID=Msa1323800-mRNA-1:cds;Parent=Msa1323800-mRNA-1
chr8_4 CDS 32447727 32447816 32447727 ID=Msa1323800-mRNA-1:cds;Parent=Msa1323800-mRNA-1
chr8_4 three_prime_UTR 32447817 32448014 32447817 ID=Msa1323800-mRNA-1:three_prime_utr;Parent=Msa1323800-mRNA-1
Gene Sequence

>Msa1323800

ATGACCGATAAATACAGACCTGAATCTTGTTATATTATTGGGAACTATTACAGTTTAAAGGGGCATCATGAAAAAGCAGTTCAATATTTTAGGAGAGCCCTTAAACTGAACAGAAACTATCTATCTGCTTGGACACTTATGGGTCATGAGTATGTAGAAATGAAAAACACGGGCGCTGCTGTGGGTGCCTATCGTCAGGCTGTTGATATAGATCGGCGTGATTACCGTGCTTGGTATGGACTAGGACAAGCTTACGAGATGATGGGTAAGCCTTTTTGGGCGCTTCATTACTTCAAAGAATCTGTTTTCTATCAGCCAAATGATTCCCGGTTGTCAATTGCAATGGCTCAATGCTATGAAAATGACCAGATTCACATGCTCGATGAGGCGATAAAGTGTTACAGAAGGGCATCAAATTGTAATGACGGTGAAGCAATTGCTACGCACCAACTTGGAAAGCTGCATTCAGAGCTGGGACACCATGAAGAGGCAGCATTTTACTACAAAAAAGATTTAGAGAGGATGGAATCTGAAGAGAGGAATGGACCTAACATGGTTGAGGCTTTGCTTTTCCTTGCAAATTATTACAAATCAAGGAGAAGATTTGAAGAAGCAGAGGCTTATTGTACTCGTCTTCTTGATTATACTGGCCCTGAGAGGGAGACAGCAAAAAGTTTACTTAGAGGGATGCGATCGTCACAATCTAGTTTCCCTCCATTGGATGTTGATCACTTTCCTCCCTAA
Protein sequence

>Msa1323800

MTDKYRPESCYIIGNYYSLKGHHEKAVQYFRRALKLNRNYLSAWTLMGHEYVEMKNTGAAVGAYRQAVDIDRRDYRAWYGLGQAYEMMGKPFWALHYFKESVFYQPNDSRLSIAMAQCYENDQIHMLDEAIKCYRRASNCNDGEAIATHQLGKLHSELGHHEEAAFYYKKDLERMESEERNGPNMVEALLFLANYYKSRRRFEEAEAYCTRLLDYTGPERETAKSLLRGMRSSQSSFPPLDVDHFPP*