AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0103790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0103790 MtrunA17_Chr1g0157701 98.378 678 7 3 1 678 1 674 0.0 1360
Msa0103790 MtrunA17_Chr3g0139891 70.392 689 165 9 1 673 1 666 0.0 925
Msa0103790 MtrunA17_Chr3g0125541 50.411 365 159 6 4 362 7 355 4.11e-106 332
Msa0103790 MtrunA17_Chr7g0244381 47.475 297 138 2 7 286 15 310 2.32e-89 294
Msa0103790 MtrunA17_Chr3g0131021 41.343 283 150 5 1 277 1 273 1.78e-60 209
Msa0103790 MtrunA17_Chr8g0385261 39.437 284 160 3 1 279 1 277 1.17e-57 200
Msa0103790 MtrunA17_Chr5g0395341 32.353 272 167 9 2 266 48 309 1.90e-34 135
Msa0103790 MtrunA17_Chr4g0039841 32.971 276 167 10 5 266 78 349 1.70e-22 100
Msa0103790 MtrunA17_Chr7g0261361 26.552 290 175 10 5 271 41 315 4.30e-20 93.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0103790 AT4G32760.1 57.525 711 233 20 1 678 1 675 0.0 692
Msa0103790 AT4G32760.2 57.183 710 238 18 1 678 1 676 0.0 689
Msa0103790 AT4G32760.3 65.828 477 137 9 1 475 1 453 0.0 593
Msa0103790 AT3G08790.1 48.373 707 236 28 1 678 1 607 0.0 531
Msa0103790 AT1G21380.1 58.364 269 109 2 4 272 7 272 1.18e-104 328
Msa0103790 AT1G76970.2 56.701 291 111 4 4 293 7 283 1.26e-103 323
Msa0103790 AT1G76970.3 56.701 291 111 4 4 293 7 283 1.26e-103 323
Msa0103790 AT1G76970.6 56.701 291 111 4 4 293 7 283 1.26e-103 323
Msa0103790 AT1G76970.1 56.701 291 111 4 4 293 7 283 1.26e-103 323
Msa0103790 AT1G76970.7 55.172 261 102 4 34 293 11 257 6.09e-84 271
Msa0103790 AT1G76970.4 55.172 261 102 4 34 293 11 257 6.09e-84 271
Msa0103790 AT2G38410.1 45.928 307 123 5 7 270 13 319 3.07e-76 258
Msa0103790 AT5G01760.1 46.154 273 142 3 2 271 22 292 3.06e-75 252
Msa0103790 AT5G63640.1 43.223 273 151 3 1 272 1 270 8.29e-66 224
Msa0103790 AT5G63640.2 43.223 273 151 3 1 272 1 270 8.29e-66 224
Msa0103790 AT1G76970.5 55.502 209 78 4 86 293 1 195 3.70e-63 214
Msa0103790 AT5G16880.4 32.500 280 158 11 3 266 49 313 2.77e-33 132
Msa0103790 AT5G16880.1 32.500 280 158 11 3 266 49 313 2.77e-33 132
Msa0103790 AT5G16880.2 32.500 280 158 11 3 266 49 313 2.77e-33 132
Msa0103790 AT5G16880.3 33.333 258 145 10 3 247 49 292 7.81e-31 123
Msa0103790 AT1G06210.1 28.315 279 174 10 1 263 37 305 2.66e-21 97.1
Msa0103790 AT1G06210.2 27.442 215 135 7 5 205 41 248 1.03e-12 69.7

Find 250 sgRNAs with CRISPR-Local

Find 693 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAATTGATTCCTATAATTT+TGG 0.177177 1_3:+11180814 None:intergenic
AAAGATTCCGGCGATGAATT+TGG 0.225679 1_3:+11189906 None:intergenic
CAACTTACTTCTTTGTTGTT+AGG 0.228067 1_3:+11185881 None:intergenic
CATTAGGTTGCTGGGTTGGC+TGG 0.231144 1_3:+11182225 None:intergenic
TTTGGATGTACCAAAATTAT+AGG 0.247754 1_3:-11180824 Msa0103790:three_prime_UTR
TCAGGAACTTCTACTCAAAA+TGG 0.249040 1_3:-11183349 Msa0103790:CDS
CGTAGCCATAACCTGCAAAT+TGG 0.286960 1_3:+11181374 None:intergenic
GCATCAACTGATTCAATGTT+TGG 0.287115 1_3:+11182471 None:intergenic
ACAGAATGCACATGGTATTA+TGG 0.289964 1_3:-11185936 Msa0103790:CDS
GATACTTGGCAAGAAGCTTT+TGG 0.303182 1_3:-11186671 Msa0103790:CDS
CAAACATGACATAAACTATT+AGG 0.311058 1_3:+11180843 None:intergenic
TGTTGATATTGAGGAGTAAA+TGG 0.311481 1_3:+11182185 None:intergenic
TTGCTGGGTTGGCTGGGTAT+TGG 0.312728 1_3:+11182232 None:intergenic
ACAGGAGGTTATTGTTGATT+TGG 0.312747 1_3:-11184364 Msa0103790:CDS
CTAATAGTTTATGTCATGTT+TGG 0.313421 1_3:-11180842 Msa0103790:three_prime_UTR
TCCTCTTCTGGTGCTGAAGC+AGG 0.313482 1_3:-11182497 Msa0103790:CDS
AAGCCAGAGGATAAGTTATT+CGG 0.322015 1_3:-11181217 Msa0103790:CDS
GGAAACCAATTTGCAGGTTA+TGG 0.323327 1_3:-11181379 Msa0103790:CDS
CCTGCGCCAGCTACTTCTAA+TGG 0.325063 1_3:-11182446 Msa0103790:CDS
CCTAATGTTGGTGGCCAATC+TGG 0.331093 1_3:-11182209 Msa0103790:CDS
GATGCTCCTTTGGTTGATAC+TGG 0.332313 1_3:-11183274 Msa0103790:CDS
GTCCCACTTGGGATCAGCTT+TGG 0.346784 1_3:+11182409 None:intergenic
GAAAGGTTTGGGGTTAGAAT+TGG 0.347628 1_3:+11189966 None:intergenic
TACCGTTGGAAGAAAGGTTT+GGG 0.352595 1_3:+11189955 None:intergenic
AACTTACTTCTTTGTTGTTA+GGG 0.355207 1_3:+11185882 None:intergenic
GGTGAAAATAGTAAAGAAAA+AGG 0.355667 1_3:-11186829 Msa0103790:intron
GCGAAACTCCAGTTCCAATC+AGG 0.356777 1_3:-11181275 Msa0103790:CDS
TTCTCTTTGACATGAAAATC+AGG 0.358337 1_3:+11186710 None:intergenic
GGCCACCAACATTAGGTTGC+TGG 0.360208 1_3:+11182216 None:intergenic
GCAAGTGAAGTATCTGCTTT+TGG 0.360775 1_3:+11182359 None:intergenic
ATGAAGAAATATTACCATAA+GGG 0.367323 1_3:+11182009 None:intergenic
CAACAACCAGCTTCCCCTTA+TGG 0.367428 1_3:-11182023 Msa0103790:intron
AAGAAGATTCAAAACAGAAT+TGG 0.367494 1_3:+11189834 None:intergenic
TATATGTGCAGGTCCTCTTC+TGG 0.367659 1_3:-11182509 Msa0103790:intron
TTCAGCAACCTGACCATTCC+AGG 0.367910 1_3:+11182049 None:intergenic
TGTAGATATTGATGCTCCTT+TGG 0.367957 1_3:-11183284 Msa0103790:CDS
GGTTGAGCTTCCCAGGGAGG+CGG 0.370824 1_3:+11181718 None:intergenic
GTTGAGCTTCCCAGGGAGGC+GGG 0.373988 1_3:+11181719 None:intergenic
CAGCATATGCAAGGTGTTGC+AGG 0.379990 1_3:-11181475 Msa0103790:CDS
GTCGGCCGGTTGAGCTTCCC+AGG 0.382699 1_3:+11181711 None:intergenic
AAGATTGTGGTAGTTTAGTT+TGG 0.385322 1_3:+11189929 None:intergenic
ATGTATGGAAACCAATTTGC+AGG 0.388230 1_3:-11181385 Msa0103790:CDS
CCAGATTGGCCACCAACATT+AGG 0.388416 1_3:+11182209 None:intergenic
AGCCAGAGGATAAGTTATTC+GGG 0.389324 1_3:-11181216 Msa0103790:CDS
GCCTCCCTGGGAAGCTCAAC+CGG 0.390259 1_3:-11181716 Msa0103790:CDS
CCAGGTTGGAAGCAATCAAT+TGG 0.397618 1_3:-11181509 Msa0103790:CDS
TACATTTGCTGCTCAATGTA+TGG 0.403276 1_3:+11181328 None:intergenic
GCAGAGGTCTCAGCTGCGTC+TGG 0.404197 1_3:+11186284 None:intergenic
ACAGAGTTCCGCAAATCATC+AGG 0.405602 1_3:-11181614 Msa0103790:CDS
CTCCGATCGCATCGGTGGTT+CGG 0.407342 1_3:-11189883 Msa0103790:five_prime_UTR
CTACGGTCAACAACAACAAC+AGG 0.411293 1_3:-11181356 Msa0103790:CDS
TACTGGTTCTTGTAGATACT+TGG 0.411730 1_3:-11186685 Msa0103790:CDS
TGCTGTTGTTGTTGATATTG+AGG 0.412239 1_3:+11182176 None:intergenic
TCATGTCAAAGAGAAGATAC+TGG 0.412710 1_3:-11186702 Msa0103790:CDS
GCATTTGCCACATTTCCATT+GGG 0.415690 1_3:+11182122 None:intergenic
ATGCGATCGGAGAAAGATTC+CGG 0.416094 1_3:+11189894 None:intergenic
GGGCCTCAAGCAATGGGTTA+TGG 0.416438 1_3:-11181592 Msa0103790:CDS
GTGGTGGAAACATTAAAATA+TGG 0.427011 1_3:-11180952 Msa0103790:three_prime_UTR
GAAGTCAATGGTTGTGTTTG+TGG 0.430137 1_3:+11186341 None:intergenic
CTCGATGTTCATAGCCCAAT+CGG 0.430614 1_3:+11189747 None:intergenic
CATCAACTGATTCAATGTTT+GGG 0.430869 1_3:+11182472 None:intergenic
TCACTTGCTCTTGTTCCTCT+AGG 0.432550 1_3:-11182344 Msa0103790:CDS
TTGATAGGTGCGCAAAATAG+TGG 0.434876 1_3:-11181751 Msa0103790:intron
CGCATCGGTGGTTCGGTCTA+CGG 0.435131 1_3:-11189876 Msa0103790:five_prime_UTR
GACATATGGCCGTTAGCATT+TGG 0.438245 1_3:+11181544 None:intergenic
TGGTGATACCGTTGGAAGAA+AGG 0.439944 1_3:+11189949 None:intergenic
GGATGAATCACTGCTATGCC+AGG 0.440080 1_3:-11183428 Msa0103790:CDS
CGTATAACCCTGATTGGAAC+TGG 0.441053 1_3:+11181267 None:intergenic
TCTGTTTCAGGGGCTTAGAC+AGG 0.441192 1_3:-11184382 Msa0103790:intron
ATCGGAGATGGTGAATTCTA+TGG 0.441462 1_3:-11189803 Msa0103790:exon
ATTCACCTTTGGTACTCCTA+AGG 0.443977 1_3:-11180765 Msa0103790:three_prime_UTR
ATTAACATCAATAAAAGATA+AGG 0.444187 1_3:+11180909 None:intergenic
TTAAAATACATCAAAACCTT+AGG 0.446920 1_3:+11180749 None:intergenic
ATTAGGTTGCTGGGTTGGCT+GGG 0.449281 1_3:+11182226 None:intergenic
TATACGTCTTATGTTCCATC+GGG 0.450942 1_3:-11181250 Msa0103790:CDS
GCCACCAACATTAGGTTGCT+GGG 0.452678 1_3:+11182217 None:intergenic
GCATCCGCATCACGTATGTT+TGG 0.453144 1_3:+11186311 None:intergenic
ATACCGTTGGAAGAAAGGTT+TGG 0.453442 1_3:+11189954 None:intergenic
AGCATTTGCCACATTTCCAT+TGG 0.459100 1_3:+11182121 None:intergenic
TACATTGAGCAGCAAATGTA+TGG 0.459475 1_3:-11181325 Msa0103790:CDS
AACTTATCCTCTGGCTTGGA+AGG 0.462554 1_3:+11181223 None:intergenic
TGAGCTTCCCAGGGAGGCGG+GGG 0.463386 1_3:+11181721 None:intergenic
GGAGGTTATTGTTGATTTGG+TGG 0.464547 1_3:-11184361 Msa0103790:CDS
ATAAGACGTATAACCCTGAT+TGG 0.464637 1_3:+11181261 None:intergenic
AGCTCCTGCCTGGAATGGTC+AGG 0.464680 1_3:-11182057 Msa0103790:CDS
CGCAAAGTACAGCTCCTGCC+TGG 0.465640 1_3:-11182067 Msa0103790:CDS
GACAATGGCAGTCCGGTGGC+AGG 0.467628 1_3:-11181691 Msa0103790:CDS
TATGCTCATCGGTCCCGATT+GGG 0.469583 1_3:-11189761 Msa0103790:CDS
TTGGTTGATACTGGAGATAC+TGG 0.474645 1_3:-11183265 Msa0103790:CDS
CACTTGGGATCAGCTTTGGC+AGG 0.476176 1_3:+11182413 None:intergenic
CATACGTAGTTGAGTTTACA+AGG 0.477206 1_3:+11184304 None:intergenic
ATCTGCAGCGTCTACTTGCC+AGG 0.479242 1_3:-11183387 Msa0103790:CDS
GACATGCTCAATCATGATCC+TGG 0.479397 1_3:-11189718 Msa0103790:CDS
CCAATTGATTGCTTCCAACC+TGG 0.480702 1_3:+11181509 None:intergenic
ATGTATCCACAACAGATGTA+TGG 0.480885 1_3:-11181400 Msa0103790:CDS
GGTTATTGACTGCTGACATA+TGG 0.481015 1_3:+11181530 None:intergenic
TGCCACCGGACTGCCATTGT+CGG 0.482885 1_3:+11181693 None:intergenic
TAAACATTACCAGCAGTTCC+TGG 0.483312 1_3:+11186609 None:intergenic
CCAACATTAGGTTGCTGGGT+TGG 0.483771 1_3:+11182221 None:intergenic
ACCACTGAGCAGGTCCCACT+TGG 0.485032 1_3:+11182397 None:intergenic
GCCAGCTACTTCTAATGGTT+CGG 0.489203 1_3:-11182441 Msa0103790:CDS
TCTTCGTTGGTGATCGGAGA+TGG 0.492660 1_3:-11189815 Msa0103790:exon
TTGAGGCCCCTGATGATTTG+CGG 0.494420 1_3:+11181606 None:intergenic
ATACATCTGTTGTGGATACA+TGG 0.495242 1_3:+11181402 None:intergenic
AGGTGTTGCAGGGCACTACA+TGG 0.496391 1_3:-11181464 Msa0103790:CDS
GAATCTTCTTCGTTGGTGAT+CGG 0.498032 1_3:-11189821 Msa0103790:five_prime_UTR
ACCGGACTGCCATTGTCGGC+CGG 0.498259 1_3:+11181697 None:intergenic
TCCCCGAATAACTTATCCTC+TGG 0.499326 1_3:+11181214 None:intergenic
TCAAAATGGAAATCAGATAG+AGG 0.499420 1_3:-11183335 Msa0103790:CDS
TGCTGCATACCAGGAACTGC+TGG 0.500884 1_3:-11186618 Msa0103790:intron
TGGTTTCCATACATCTGTTG+TGG 0.501498 1_3:+11181394 None:intergenic
GATGTTAATAAATGAGAAGA+CGG 0.503054 1_3:-11180895 Msa0103790:three_prime_UTR
ACAAGTTGCCGAGCAGATGC+AGG 0.506068 1_3:+11183304 None:intergenic
GCAATGGGTTATGGCCAGGC+TGG 0.509475 1_3:-11181583 Msa0103790:CDS
AAAATGGAGAACTGGGAGTG+GGG 0.509490 1_3:-11180987 Msa0103790:three_prime_UTR
CGAAACTCCAGTTCCAATCA+GGG 0.509903 1_3:-11181274 Msa0103790:CDS
CCTCTTCTGGTGCTGAAGCA+GGG 0.511267 1_3:-11182496 Msa0103790:CDS
ACCGGCCGACAATGGCAGTC+CGG 0.511847 1_3:-11181698 Msa0103790:CDS
TCAAGCAATGGGTTATGGCC+AGG 0.512254 1_3:-11181587 Msa0103790:CDS
TCATCAGGGGCCTCAAGCAA+TGG 0.513105 1_3:-11181599 Msa0103790:CDS
TTAGAAACATACCTTAGTGT+TGG 0.513310 1_3:+11186248 None:intergenic
CATCAGGGGCCTCAAGCAAT+GGG 0.515377 1_3:-11181598 Msa0103790:CDS
TGTGGATACTGAGGTGGTAG+TGG 0.515502 1_3:+11181658 None:intergenic
AAATGGAGAACTGGGAGTGG+GGG 0.517695 1_3:-11180986 Msa0103790:three_prime_UTR
TGACTGAATTGAGGTGGTTG+TGG 0.519401 1_3:+11181640 None:intergenic
ATATGCTCATCGGTCCCGAT+TGG 0.523143 1_3:-11189762 Msa0103790:CDS
TGATCAGATACAGGAGTGGC+AGG 0.525801 1_3:+11182311 None:intergenic
AGGGCATTCTGATCAGATAC+AGG 0.527497 1_3:+11182302 None:intergenic
TTGAGCTTCCCAGGGAGGCG+GGG 0.527665 1_3:+11181720 None:intergenic
AAACATCACAAGTTAGCAAA+CGG 0.529310 1_3:+11181105 None:intergenic
GAATAACTTATCCTCTGGCT+TGG 0.531180 1_3:+11181219 None:intergenic
GTTTAGTTTGGTGATACCGT+TGG 0.533596 1_3:+11189941 None:intergenic
GTTTGTGGAGGAGTGAATAC+AGG 0.534401 1_3:+11186356 None:intergenic
CAATTTGCAGGTTATGGCTA+CGG 0.534873 1_3:-11181373 Msa0103790:CDS
ACATACGTGATGCGGATGCT+CGG 0.535203 1_3:-11186307 Msa0103790:CDS
ATATTACCATAAGGGGAAGC+TGG 0.535454 1_3:+11182017 None:intergenic
TCTCTGAGGGAATACTGCTC+CGG 0.536339 1_3:+11186394 None:intergenic
TGAAGAAATATTACCATAAG+GGG 0.538079 1_3:+11182010 None:intergenic
ATGTTAATAAATGAGAAGAC+GGG 0.541012 1_3:-11180894 Msa0103790:three_prime_UTR
TCAATACTATGCTGCATACC+AGG 0.541368 1_3:-11186627 Msa0103790:CDS
AAAGGCATAAAGAAGCGGAT+TGG 0.542432 1_3:-11188886 Msa0103790:CDS
CATAGTTATCACCACTGAGC+AGG 0.544400 1_3:+11182387 None:intergenic
CATCATTGAGAGCTAGTCCC+TGG 0.544403 1_3:+11183410 None:intergenic
GGCTTGGAAGGCTTCCCCGA+TGG 0.547370 1_3:+11181235 None:intergenic
TCGATGTTCATAGCCCAATC+GGG 0.548956 1_3:+11189748 None:intergenic
AATGGAAATGTGGCAAATGC+TGG 0.552770 1_3:-11182119 Msa0103790:CDS
TGGTATTATGGATGTTCTTG+CGG 0.553127 1_3:-11185924 Msa0103790:CDS
ACCCCAAACCTTTCTTCCAA+CGG 0.553754 1_3:-11189957 Msa0103790:five_prime_UTR
TGCAGTGATTGCTCATACTG+AGG 0.553972 1_3:+11182092 None:intergenic
TCTTTCTCCGATCGCATCGG+TGG 0.555070 1_3:-11189888 Msa0103790:five_prime_UTR
TTATACGTCTTATGTTCCAT+CGG 0.555460 1_3:-11181251 Msa0103790:CDS
CAGGTTGGAAGCAATCAATT+GGG 0.555583 1_3:-11181508 Msa0103790:CDS
TCCGCATCACGTATGTTTGG+AGG 0.557580 1_3:+11186314 None:intergenic
TAAGTTATTCGGGGATCTTG+TGG 0.557924 1_3:-11181206 Msa0103790:CDS
TGCAGGGCACTACATGGGCA+TGG 0.559619 1_3:-11181458 Msa0103790:CDS
TTTGGAGGGTATGAAGTCAA+TGG 0.561502 1_3:+11186329 None:intergenic
CCCTGCTTCAGCACCAGAAG+AGG 0.561683 1_3:+11182496 None:intergenic
TACATGCTACCAGCTCGACC+TGG 0.562479 1_3:+11181154 None:intergenic
GAAGCTCAACCGGCCGACAA+TGG 0.563209 1_3:-11181706 Msa0103790:CDS
AAAACAACTCCAGGTCGAGC+TGG 0.563885 1_3:-11181163 Msa0103790:CDS
GAGGAGTAAATGGACCAGAT+TGG 0.564498 1_3:+11182195 None:intergenic
ACCCAGCAACCTAATGTTGG+TGG 0.567684 1_3:-11182218 Msa0103790:CDS
AGTCTGAATTTCCAACACTA+AGG 0.569742 1_3:-11186259 Msa0103790:intron
GCCGAACCATTAGAAGTAGC+TGG 0.571481 1_3:+11182440 None:intergenic
GATTCAAAACAGAATTGGAT+CGG 0.572471 1_3:+11189839 None:intergenic
GTGAAGCCGAAAACAACTCC+AGG 0.572576 1_3:-11181172 Msa0103790:CDS
ATTTGCTTATTTCAGCGTGC+CGG 0.572850 1_3:-11186413 Msa0103790:intron
GTTTCAGGGGCTTAGACAGG+AGG 0.574938 1_3:-11184379 Msa0103790:intron
AGTACAGCTCCTGCCTGGAA+TGG 0.575026 1_3:-11182062 Msa0103790:CDS
CCATTAGAAGTAGCTGGCGC+AGG 0.577223 1_3:+11182446 None:intergenic
GGATACTGACCACCTGCCAC+CGG 0.577534 1_3:+11181679 None:intergenic
CAATCTTCCAAATTCATCGC+CGG 0.578633 1_3:-11189913 Msa0103790:five_prime_UTR
ATTCGGGGATCTTGTGGACA+TGG 0.579335 1_3:-11181200 Msa0103790:CDS
CAGATTGATCAGATCTCTGA+GGG 0.581230 1_3:+11186381 None:intergenic
GCATGTACATACCACCAGCC+TGG 0.582983 1_3:+11181569 None:intergenic
TGGTATGCAGCATAGTATTG+AGG 0.583633 1_3:+11186629 None:intergenic
CAAGCAAAGGACGTTGTCAA+AGG 0.585152 1_3:-11188904 Msa0103790:CDS
TATGCTTATTAGGCAAGCAA+AGG 0.585435 1_3:-11188917 Msa0103790:intron
TGACAAAATAGATTCATGCC+TGG 0.586132 1_3:+11183369 None:intergenic
CCCTCCAAACATACGTGATG+CGG 0.586421 1_3:-11186315 Msa0103790:CDS
CAGCAGACATTCACATCTCA+AGG 0.586696 1_3:-11182155 Msa0103790:CDS
GGCCGACAATGGCAGTCCGG+TGG 0.587262 1_3:-11181695 Msa0103790:CDS
GTGGTTCGGTCTACGGTCGT+CGG 0.587935 1_3:-11189869 Msa0103790:five_prime_UTR
AGCATATGCAAGGTGTTGCA+GGG 0.588258 1_3:-11181474 Msa0103790:CDS
AATGGCAGTCCGGTGGCAGG+TGG 0.589281 1_3:-11181688 Msa0103790:CDS
GATACTGGCAAACAAACTGA+TGG 0.591438 1_3:-11183250 Msa0103790:CDS
GAATCTTTCTCCGATCGCAT+CGG 0.591872 1_3:-11189891 Msa0103790:five_prime_UTR
GACCGAACCACCGATGCGAT+CGG 0.593640 1_3:+11189881 None:intergenic
TGTGGATACATGGAAGCCGC+AGG 0.595377 1_3:+11181412 None:intergenic
CCGCATCACGTATGTTTGGA+GGG 0.596322 1_3:+11186315 None:intergenic
GCAACCTGACCATTCCAGGC+AGG 0.596460 1_3:+11182053 None:intergenic
CCAACCCAGCAACCTAATGT+TGG 0.596551 1_3:-11182221 Msa0103790:CDS
CAGAGTTCCGCAAATCATCA+GGG 0.596713 1_3:-11181613 Msa0103790:CDS
ATGGGTTATGGCCAGGCTGG+TGG 0.596992 1_3:-11181580 Msa0103790:CDS
TGGCCATAACCCATTGCTTG+AGG 0.597077 1_3:+11181589 None:intergenic
CTCTGTACATGACTGAATTG+AGG 0.598943 1_3:+11181631 None:intergenic
ACCGATGAGCATATCGCTCG+TGG 0.599653 1_3:+11189771 None:intergenic
TCGGCCGGTTGAGCTTCCCA+GGG 0.600818 1_3:+11181712 None:intergenic
TCAGCAGTCAATAACCAGGT+TGG 0.603323 1_3:-11181523 Msa0103790:CDS
CATTTGCCACATTTCCATTG+GGG 0.605378 1_3:+11182123 None:intergenic
TATTGAGGATATCTTGCCCT+CGG 0.605821 1_3:+11186644 None:intergenic
GAGAGATGTGCTTCATGAGA+TGG 0.615658 1_3:-11186850 Msa0103790:CDS
CAACACCTTGCATATGCTGA+GGG 0.616302 1_3:+11181479 None:intergenic
TACATGCAGCCAAATGCTAA+CGG 0.616828 1_3:-11181553 Msa0103790:CDS
GTGGAAACATTAAAATATGG+AGG 0.617039 1_3:-11180949 Msa0103790:three_prime_UTR
CAAAACCTTAGGAGTACCAA+AGG 0.619031 1_3:+11180760 None:intergenic
TGAGGTGGTTGTGGATACTG+AGG 0.619141 1_3:+11181649 None:intergenic
CTTCACTTACAGTTAGTGCA+AGG 0.620099 1_3:+11188839 None:intergenic
GGTGTTGCAGGGCACTACAT+GGG 0.620377 1_3:-11181463 Msa0103790:CDS
GTCAATGGTTGTGTTTGTGG+AGG 0.621322 1_3:+11186344 None:intergenic
GCGATGAATTTGGAAGATTG+TGG 0.629083 1_3:+11189916 None:intergenic
ATGCACCCTCAGCATATGCA+AGG 0.632651 1_3:-11181484 Msa0103790:CDS
ATACTGGCAAACAAACTGAT+GGG 0.633087 1_3:-11183249 Msa0103790:CDS
TTGATGTAAATTGATTCTAG+AGG 0.635306 1_3:-11181019 Msa0103790:three_prime_UTR
GCAACACCTTGCATATGCTG+AGG 0.636896 1_3:+11181478 None:intergenic
ATTCAAAGCCTGCATCTGCT+CGG 0.639862 1_3:-11183312 Msa0103790:CDS
GGTGGTTGTGGATACTGAGG+TGG 0.641647 1_3:+11181652 None:intergenic
GCAGGTTGTTGTTCTCCTAG+AGG 0.643273 1_3:+11182329 None:intergenic
TTGTCAAAGGCATAAAGAAG+CGG 0.644081 1_3:-11188891 Msa0103790:CDS
GATGAATCACTGCTATGCCA+GGG 0.646115 1_3:-11183427 Msa0103790:CDS
GCCACGAGCGATATGCTCAT+CGG 0.646284 1_3:-11189772 Msa0103790:CDS
TGTTAATAAATGAGAAGACG+GGG 0.649777 1_3:-11180893 Msa0103790:three_prime_UTR
GAAACAATCATAAAGAACTG+TGG 0.650766 1_3:-11186900 Msa0103790:CDS
CTGCCAAAGCTGATCCCAAG+TGG 0.653739 1_3:-11182412 Msa0103790:CDS
ACATGCTCAATCATGATCCT+GGG 0.654067 1_3:-11189717 Msa0103790:intron
CCACTGAGCAGGTCCCACTT+GGG 0.655885 1_3:+11182398 None:intergenic
TGGAAATTCAGACTCTGCAG+AGG 0.657289 1_3:+11186268 None:intergenic
GCCGGTTGAGCTTCCCAGGG+AGG 0.657704 1_3:+11181715 None:intergenic
TATGTCAGCAGTCAATAACC+AGG 0.660036 1_3:-11181527 Msa0103790:CDS
GTATCTCCAGTATCAACCAA+AGG 0.662112 1_3:+11183268 None:intergenic
TCAAGCACAAGGTGGTCCTG+CGG 0.662796 1_3:-11181428 Msa0103790:CDS
TGCCAAAGCTGATCCCAAGT+GGG 0.663726 1_3:-11182411 Msa0103790:CDS
GGGGAAGCCTTCCAAGCCAG+AGG 0.670946 1_3:-11181230 Msa0103790:CDS
TAGAACATACAAGCAAAGAG+TGG 0.671247 1_3:-11184331 Msa0103790:CDS
GCAGATTGATCAGATCTCTG+AGG 0.679477 1_3:+11186380 None:intergenic
GCCAGAGGATAAGTTATTCG+GGG 0.692773 1_3:-11181215 Msa0103790:CDS
ATGGCTTCACATCAAGCACA+AGG 0.694149 1_3:-11181439 Msa0103790:CDS
CTGGCAAACAAACTGATGGG+AGG 0.698540 1_3:-11183246 Msa0103790:intron
AGAGTTCCGCAAATCATCAG+GGG 0.699530 1_3:-11181612 Msa0103790:CDS
TACGGTCAACAACAACAACA+GGG 0.702741 1_3:-11181355 Msa0103790:CDS
CCCAAGTGGGACCTGCTCAG+TGG 0.703675 1_3:-11182398 Msa0103790:CDS
GTTAATAAATGAGAAGACGG+GGG 0.705209 1_3:-11180892 Msa0103790:three_prime_UTR
ACTGAAATACAGAATGCACA+TGG 0.716588 1_3:-11185944 Msa0103790:CDS
CAGACATTCACATCTCAAGG+TGG 0.719363 1_3:-11182152 Msa0103790:CDS
GGCTGGGTATTGGCAGACGT+AGG 0.721491 1_3:+11182242 None:intergenic
ATTCTGATCAGATACAGGAG+TGG 0.721539 1_3:+11182307 None:intergenic
TGTACATGACTGAATTGAGG+TGG 0.724888 1_3:+11181634 None:intergenic
GCTTCACATCAAGCACAAGG+TGG 0.737359 1_3:-11181436 Msa0103790:CDS
ACCGTTGGAAGAAAGGTTTG+GGG 0.742714 1_3:+11189956 None:intergenic
ATACGTCTTATGTTCCATCG+GGG 0.761345 1_3:-11181249 Msa0103790:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCATTATTTATTTTTAAATC+CGG - chr1_3:11181915-11181934 Msa0103790:intron 10.0%
!! GTAAAATTTATAAAATTTGT+AGG - chr1_3:11182454-11182473 Msa0103790:CDS 10.0%
!! AGATATATGATATAATATTA+TGG + chr1_3:11183354-11183373 None:intergenic 10.0%
!!! TAAGATTTTATGTTAAAATA+TGG - chr1_3:11183633-11183652 Msa0103790:intron 10.0%
!! TTTATAATTATACTGAAAAT+AGG + chr1_3:11186641-11186660 None:intergenic 10.0%
!! TTTATAATTATACTGAAAAT+AGG + chr1_3:11186641-11186660 None:intergenic 10.0%
!! GAAATATAATTATAATTGAT+AGG + chr1_3:11187094-11187113 None:intergenic 10.0%
!!! TTATAATTATATTTCTACAT+TGG - chr1_3:11187099-11187118 Msa0103790:intron 10.0%
!! AAGAAAAATACGAAAAAAAT+CGG + chr1_3:11181491-11181510 None:intergenic 15.0%
!! CAAAATATGTATTTCATATT+TGG - chr1_3:11181611-11181630 Msa0103790:CDS 15.0%
!! AGTATAACTAATTATAATTC+AGG + chr1_3:11182106-11182125 None:intergenic 15.0%
!!! TATATTTTGATTGACTATTT+TGG + chr1_3:11182234-11182253 None:intergenic 15.0%
!!! TAAATCTACTTTTTTCATAA+TGG + chr1_3:11182485-11182504 None:intergenic 15.0%
!! TCCTTTAATAAAATAATCTT+AGG - chr1_3:11182822-11182841 Msa0103790:intron 15.0%
!!! CTATTTTTTTTATTATCCAA+AGG - chr1_3:11184273-11184292 Msa0103790:intron 15.0%
!! TTCAAATTATTCTCTTTATT+TGG - chr1_3:11184954-11184973 Msa0103790:intron 15.0%
!! TAGAAAACAATGAAATAAAT+TGG - chr1_3:11185222-11185241 Msa0103790:intron 15.0%
!! AATTATATATGCAGTTTATT+TGG - chr1_3:11185778-11185797 Msa0103790:intron 15.0%
!!! TATGATAATTATAATTTGCA+TGG - chr1_3:11185854-11185873 Msa0103790:intron 15.0%
!! ATTGTTTAGATTCTTAAAAT+AGG + chr1_3:11186157-11186176 None:intergenic 15.0%
!! AATTTCATAATATCATAGAA+GGG + chr1_3:11186441-11186460 None:intergenic 15.0%
!! ATATAAAAATGTTCTTACTA+TGG - chr1_3:11187236-11187255 Msa0103790:intron 15.0%
!!! TATGTTCATATTATTTTTAC+TGG - chr1_3:11187603-11187622 Msa0103790:intron 15.0%
!! TGTTTATACATAACATATTT+CGG + chr1_3:11187868-11187887 None:intergenic 15.0%
!!! TGATTTATCTATTTTCATAA+TGG - chr1_3:11188724-11188743 Msa0103790:intron 15.0%
!!! GATTTATCTATTTTCATAAT+GGG - chr1_3:11188725-11188744 Msa0103790:intron 15.0%
!!! ATTGATAATTTAACTGTATA+GGG - chr1_3:11188884-11188903 Msa0103790:CDS 15.0%
!! ATTAACATCAATAAAAGATA+AGG + chr1_3:11189803-11189822 None:intergenic 15.0%
!!! ATAATTGATTCCTATAATTT+TGG + chr1_3:11189898-11189917 None:intergenic 15.0%
!!! ATTGTTCTCAATTTTTTCAA+TGG + chr1_3:11181087-11181106 None:intergenic 20.0%
!! TTATTACACATAATCACTTA+TGG - chr1_3:11181232-11181251 Msa0103790:CDS 20.0%
!! CACTAAATAATGTTAAATAG+TGG + chr1_3:11181394-11181413 None:intergenic 20.0%
!! CACTATTTAACATTATTTAG+TGG - chr1_3:11181392-11181411 Msa0103790:CDS 20.0%
!! AGAAAAATACGAAAAAAATC+GGG + chr1_3:11181490-11181509 None:intergenic 20.0%
!!! TTTTCTTACATTTCAAACTT+CGG - chr1_3:11181504-11181523 Msa0103790:CDS 20.0%
!!! TTAGTCAACTTTTAAAGTTT+AGG + chr1_3:11182066-11182085 None:intergenic 20.0%
!!! ATGATTTTTTACAGATGAAA+AGG + chr1_3:11182161-11182180 None:intergenic 20.0%
!! TTTCATCTGTAAAAAATCAT+AGG - chr1_3:11182161-11182180 Msa0103790:CDS 20.0%
!!! TTCTATTTTTACTGAAAACA+TGG - chr1_3:11182640-11182659 Msa0103790:intron 20.0%
!!! GGAAGATTTTTTTAATTTGA+AGG + chr1_3:11182805-11182824 None:intergenic 20.0%
!!! GCCTAAGATTATTTTATTAA+AGG + chr1_3:11182826-11182845 None:intergenic 20.0%
!!! TCTTATTTAGAAAGCTAAAA+AGG - chr1_3:11183010-11183029 Msa0103790:intron 20.0%
!! CTTATTTAGAAAGCTAAAAA+GGG - chr1_3:11183011-11183030 Msa0103790:intron 20.0%
!! TTATTTAGAAAGCTAAAAAG+GGG - chr1_3:11183012-11183031 Msa0103790:intron 20.0%
!! TATGATATAATATTATGGTG+TGG + chr1_3:11183349-11183368 None:intergenic 20.0%
!! AACTATAAATAAAGAGTTAG+AGG + chr1_3:11183397-11183416 None:intergenic 20.0%
!!! GTTTTACCAATAAGTTTTTT+TGG - chr1_3:11183414-11183433 Msa0103790:CDS 20.0%
!! TAACATAAAATCTTAATGAC+AGG + chr1_3:11183628-11183647 None:intergenic 20.0%
!!! AAAACTTATTTTTTTCCTGT+TGG - chr1_3:11183768-11183787 Msa0103790:intron 20.0%
!!! ATCAATTTAACACCTTTTTA+TGG - chr1_3:11184188-11184207 Msa0103790:intron 20.0%
!!! TCAATTTAACACCTTTTTAT+GGG - chr1_3:11184189-11184208 Msa0103790:intron 20.0%
!!! GACAAAACTAAATTTTATGA+AGG + chr1_3:11184254-11184273 None:intergenic 20.0%
!!! TGAATCAAAATACTTTTTGT+TGG - chr1_3:11184885-11184904 Msa0103790:intron 20.0%
!! AAATTGACTATAACCATTAA+AGG + chr1_3:11185042-11185061 None:intergenic 20.0%
!! ATAATCATAGTTATCACTAA+AGG + chr1_3:11185197-11185216 None:intergenic 20.0%
!! AATTAATTAAGTGAAACCAA+GGG + chr1_3:11185419-11185438 None:intergenic 20.0%
!! TAATTAATTAAGTGAAACCA+AGG + chr1_3:11185420-11185439 None:intergenic 20.0%
!! GGAAAGATAATAGAAATAAT+GGG + chr1_3:11185549-11185568 None:intergenic 20.0%
!! AGGAAAGATAATAGAAATAA+TGG + chr1_3:11185550-11185569 None:intergenic 20.0%
!!! ATTTTGTCTAGAATAGATAA+TGG + chr1_3:11185728-11185747 None:intergenic 20.0%
!! ACTTCAATACTATTCATTAA+GGG + chr1_3:11185967-11185986 None:intergenic 20.0%
!! TTTAGATTCTTAAAATAGGA+TGG + chr1_3:11186153-11186172 None:intergenic 20.0%
!! ATTTCATAATATCATAGAAG+GGG + chr1_3:11186440-11186459 None:intergenic 20.0%
!! CAATTTCATAATATCATAGA+AGG + chr1_3:11186442-11186461 None:intergenic 20.0%
!! AAACATTAGACAAAACATTA+TGG - chr1_3:11186658-11186677 Msa0103790:CDS 20.0%
!! AAACATTAGACAAAACATTA+TGG - chr1_3:11186658-11186677 Msa0103790:CDS 20.0%
!!! AATTCTCTTTTTAATTGTGA+TGG + chr1_3:11186904-11186923 None:intergenic 20.0%
!!! TCATTTTTTACTTTGTATGT+GGG + chr1_3:11186977-11186996 None:intergenic 20.0%
!!! TTCATTTTTTACTTTGTATG+TGG + chr1_3:11186978-11186997 None:intergenic 20.0%
!! CATCAATAATTATAACTGAT+AGG + chr1_3:11187141-11187160 None:intergenic 20.0%
!! TATAAAACTAAACTATTCGA+AGG + chr1_3:11187709-11187728 None:intergenic 20.0%
!!! ACAAAATATTTTCAACTAAC+CGG - chr1_3:11188129-11188148 Msa0103790:intron 20.0%
!! ATGAAGAAATATTACCATAA+GGG + chr1_3:11188703-11188722 None:intergenic 20.0%
!! AATGAAGAAATATTACCATA+AGG + chr1_3:11188704-11188723 None:intergenic 20.0%
!!! TTACATTCTCATTCTAAAAA+CGG - chr1_3:11188764-11188783 Msa0103790:intron 20.0%
!!! GATTGATAATTTAACTGTAT+AGG - chr1_3:11188883-11188902 Msa0103790:CDS 20.0%
!!! CTTTTATTTTTTGGTTTGAT+AGG - chr1_3:11188943-11188962 Msa0103790:intron 20.0%
!! TTAAAATACATCAAAACCTT+AGG + chr1_3:11189963-11189982 None:intergenic 20.0%
! AAGAAGATTCAAAACAGAAT+TGG + chr1_3:11180878-11180897 None:intergenic 25.0%
! AAAAAATTGAGAACAATTCG+AGG - chr1_3:11181090-11181109 Msa0103790:three_prime_UTR 25.0%
!! ATAATCACTTATGGATTGTT+TGG - chr1_3:11181241-11181260 Msa0103790:CDS 25.0%
!!! ATTCATTCGCTATTTTCAAT+CGG - chr1_3:11181292-11181311 Msa0103790:CDS 25.0%
! TTTCTTACATTTCAAACTTC+GGG - chr1_3:11181505-11181524 Msa0103790:CDS 25.0%
!!! TTTGTACTTTTACTAGTCTA+TGG - chr1_3:11181636-11181655 Msa0103790:CDS 25.0%
! TCTTGAACAATATTAACATC+AGG + chr1_3:11181987-11182006 None:intergenic 25.0%
!!! ATACTTTTGTTTTTGCATCA+AGG - chr1_3:11182186-11182205 Msa0103790:CDS 25.0%
! ACACAAATCTAAATCATCAA+AGG + chr1_3:11182366-11182385 None:intergenic 25.0%
!! ACTCTATATACTCAGTTTTT+GGG + chr1_3:11182411-11182430 None:intergenic 25.0%
!! ATATATACAGATGTGTTGTT+TGG - chr1_3:11182531-11182550 Msa0103790:intron 25.0%
!! TTTTACTGAAAACATGGAAT+TGG - chr1_3:11182646-11182665 Msa0103790:intron 25.0%
!!! GTTTTTATTTGAAGCTTACA+CGG + chr1_3:11182751-11182770 None:intergenic 25.0%
! AATTACATAAAAGGATGTGT+AGG - chr1_3:11182779-11182798 Msa0103790:intron 25.0%
!!! TGTTTTATGGATTTTAACCT+TGG - chr1_3:11182858-11182877 Msa0103790:intron 25.0%
! CATCAATTGATTAATGACTA+AGG + chr1_3:11182931-11182950 None:intergenic 25.0%
! AAGAATTCAACCATATGTTT+GGG + chr1_3:11183206-11183225 None:intergenic 25.0%
! AAAGAATTCAACCATATGTT+TGG + chr1_3:11183207-11183226 None:intergenic 25.0%
! AAATGATGTTTATTCAGCTT+GGG - chr1_3:11183691-11183710 Msa0103790:intron 25.0%
! GGTGAAAATAGTAAAGAAAA+AGG - chr1_3:11183880-11183899 Msa0103790:intron 25.0%
! ATATTTGGCAACTACATAAA+AGG + chr1_3:11184133-11184152 None:intergenic 25.0%
! GTAAATATTCAAAGAGTAAC+AGG + chr1_3:11184226-11184245 None:intergenic 25.0%
!! CCTTTTAGATAACAAAGTAA+AGG + chr1_3:11184489-11184508 None:intergenic 25.0%
!! CCTTTACTTTGTTATCTAAA+AGG - chr1_3:11184486-11184505 Msa0103790:intron 25.0%
!! TTACTTTGTTATCTAAAAGG+TGG - chr1_3:11184489-11184508 Msa0103790:intron 25.0%
!!! GTATACTTCTAGTTTCATAT+AGG - chr1_3:11184606-11184625 Msa0103790:intron 25.0%
!!! AACTTACTTCTTTGTTGTTA+GGG + chr1_3:11184830-11184849 None:intergenic 25.0%
! TTTGATTACATGCTAAATTG+TGG - chr1_3:11185290-11185309 Msa0103790:intron 25.0%
! TTGATTACATGCTAAATTGT+GGG - chr1_3:11185291-11185310 Msa0103790:intron 25.0%
!! AATATTTTCCAGCTGATAAT+CGG + chr1_3:11185700-11185719 None:intergenic 25.0%
!!! CCTATAATGTTTTTGAGTTA+AGG + chr1_3:11185821-11185840 None:intergenic 25.0%
! CCTTAACTCAAAAACATTAT+AGG - chr1_3:11185818-11185837 Msa0103790:intron 25.0%
! CACTTCAATACTATTCATTA+AGG + chr1_3:11185968-11185987 None:intergenic 25.0%
!! CTTAATGAATAGTATTGAAG+TGG - chr1_3:11185966-11185985 Msa0103790:intron 25.0%
!!! AAATTTCGTTCCCATTTTTT+GGG - chr1_3:11186016-11186035 Msa0103790:intron 25.0%
! AATAGGATGGAATAGTTTAT+AGG + chr1_3:11186140-11186159 None:intergenic 25.0%
! AGATATTTACACTTTACAAC+AGG + chr1_3:11186278-11186297 None:intergenic 25.0%
! GCAATCAGAACTAAAATTTA+TGG + chr1_3:11186473-11186492 None:intergenic 25.0%
! TTCTTTCTACATTAGAATGT+GGG - chr1_3:11187060-11187079 Msa0103790:intron 25.0%
!! TATATTTCTACATTGGAATG+TGG - chr1_3:11187106-11187125 Msa0103790:intron 25.0%
!! ATATTTCTACATTGGAATGT+GGG - chr1_3:11187107-11187126 Msa0103790:intron 25.0%
! CATATACAGAATATCATATG+TGG + chr1_3:11187165-11187184 None:intergenic 25.0%
! CAATAATGTAAAGAAAAGAC+AGG + chr1_3:11187497-11187516 None:intergenic 25.0%
! AATAATATGAACATATTGCC+AGG + chr1_3:11187598-11187617 None:intergenic 25.0%
! TGGAATTATATCTTTGATGT+TGG - chr1_3:11187623-11187642 Msa0103790:intron 25.0%
! GGAATTATATCTTTGATGTT+GGG - chr1_3:11187624-11187643 Msa0103790:intron 25.0%
! TGAAGTTTATCTATCTGATA+TGG - chr1_3:11187888-11187907 Msa0103790:intron 25.0%
! AATAAAACTGAACTATTCGA+AGG + chr1_3:11187963-11187982 None:intergenic 25.0%
! AAGCATATCAAAAAGAACAA+GGG + chr1_3:11188429-11188448 None:intergenic 25.0%
! AAAGCATATCAAAAAGAACA+AGG + chr1_3:11188430-11188449 None:intergenic 25.0%
!! CTTTTTGATATGCTTTCTAA+TGG - chr1_3:11188434-11188453 Msa0103790:intron 25.0%
! TGAAGAAATATTACCATAAG+GGG + chr1_3:11188702-11188721 None:intergenic 25.0%
! GAATGAGAATGTAATTGTAA+AGG + chr1_3:11188758-11188777 None:intergenic 25.0%
!! TACATTCTCATTCTAAAAAC+GGG - chr1_3:11188765-11188784 Msa0103790:intron 25.0%
! AACATATATCAGTCAATTAG+TGG + chr1_3:11188841-11188860 None:intergenic 25.0%
! ACTAATTGACTGATATATGT+TGG - chr1_3:11188840-11188859 Msa0103790:intron 25.0%
! CTAATTGACTGATATATGTT+GGG - chr1_3:11188841-11188860 Msa0103790:intron 25.0%
! AACCAAAAAATAAAAGAGTG+AGG + chr1_3:11188939-11188958 None:intergenic 25.0%
!!! ATTTTTTGTTTTTGCTTGTC+TGG - chr1_3:11189658-11189677 Msa0103790:intron 25.0%
!!! TTTTTTGTTTTTGCTTGTCT+GGG - chr1_3:11189659-11189678 Msa0103790:intron 25.0%
!! TTGATGTAAATTGATTCTAG+AGG - chr1_3:11189690-11189709 Msa0103790:intron 25.0%
! GATGTTAATAAATGAGAAGA+CGG - chr1_3:11189814-11189833 Msa0103790:exon 25.0%
! ATGTTAATAAATGAGAAGAC+GGG - chr1_3:11189815-11189834 Msa0103790:exon 25.0%
! CAAACATGACATAAACTATT+AGG + chr1_3:11189869-11189888 None:intergenic 25.0%
! CTAATAGTTTATGTCATGTT+TGG - chr1_3:11189867-11189886 Msa0103790:five_prime_UTR 25.0%
! TTTGGATGTACCAAAATTAT+AGG - chr1_3:11189885-11189904 Msa0103790:five_prime_UTR 25.0%
!!! TTTTTTCTTCTATTCACCTT+TGG - chr1_3:11189933-11189952 Msa0103790:five_prime_UTR 25.0%
AAGATTGTGGTAGTTTAGTT+TGG + chr1_3:11180783-11180802 None:intergenic 30.0%
GATTCAAAACAGAATTGGAT+CGG + chr1_3:11180873-11180892 None:intergenic 30.0%
ACCAAGAAAGAAAAAAAACG+CGG + chr1_3:11181029-11181048 None:intergenic 30.0%
! CGTTTGAATTTTATTCTGAG+TGG - chr1_3:11181549-11181568 Msa0103790:CDS 30.0%
!!! GTTTCTATGTTTTGGTGAAT+GGG - chr1_3:11181571-11181590 Msa0103790:CDS 30.0%
TCTTGACAAATATTAGCATC+CGG + chr1_3:11181937-11181956 None:intergenic 30.0%
! ATTTGTCAAGAAGAAGCTTT+TGG - chr1_3:11181946-11181965 Msa0103790:intron 30.0%
! ATTGTTCAAGAAGATGCTTT+TGG - chr1_3:11181996-11182015 Msa0103790:intron 30.0%
TAAAGTTTAGGAGGTCAAAA+TGG + chr1_3:11182054-11182073 None:intergenic 30.0%
!!! GTCAACTTTTAAAGTTTAGG+AGG + chr1_3:11182063-11182082 None:intergenic 30.0%
!! ACTTGTTGTAGTTTGTGTTA+AGG - chr1_3:11182123-11182142 Msa0103790:CDS 30.0%
! CTTGTTGTAGTTTGTGTTAA+GGG - chr1_3:11182124-11182143 Msa0103790:CDS 30.0%
ACAAAATTTACTGCAACTTC+AGG + chr1_3:11182271-11182290 None:intergenic 30.0%
!! TCTATATACTCAGTTTTTGG+GGG + chr1_3:11182409-11182428 None:intergenic 30.0%
! CTCTATATACTCAGTTTTTG+GGG + chr1_3:11182410-11182429 None:intergenic 30.0%
! CACTCTATATACTCAGTTTT+TGG + chr1_3:11182412-11182431 None:intergenic 30.0%
!! TTTGGAATTGAAAGTGTTGA+TGG - chr1_3:11182583-11182602 Msa0103790:intron 30.0%
TGGTAATCAATAGAGTAGAA+TGG - chr1_3:11182603-11182622 Msa0103790:intron 30.0%
ATCAATAGAGTAGAATGGAT+TGG - chr1_3:11182608-11182627 Msa0103790:intron 30.0%
! CCTTTTATGTAATTATGCTG+AGG + chr1_3:11182773-11182792 None:intergenic 30.0%
CCTCAGCATAATTACATAAA+AGG - chr1_3:11182770-11182789 Msa0103790:intron 30.0%
TGACAAATTATGAAACACCA+AGG + chr1_3:11182878-11182897 None:intergenic 30.0%
AATTGATTAATGACTAAGGC+AGG + chr1_3:11182927-11182946 None:intergenic 30.0%
AAGCTTTCCATTACAAAGAA+GGG - chr1_3:11183098-11183117 Msa0103790:intron 30.0%
! TATAGTGGGATGTTTCATAA+AGG + chr1_3:11183171-11183190 None:intergenic 30.0%
!! GGATGTTGCTTTATTATAGT+GGG + chr1_3:11183185-11183204 None:intergenic 30.0%
AAATAAAGAGTTAGAGGCAA+TGG + chr1_3:11183391-11183410 None:intergenic 30.0%
ATATAGTTGAATCTCGACTT+AGG + chr1_3:11183537-11183556 None:intergenic 30.0%
AATATGGAAAACTAAACCGT+CGG - chr1_3:11183649-11183668 Msa0103790:intron 30.0%
TGAATAAACATCATTTGGAC+AGG + chr1_3:11183687-11183706 None:intergenic 30.0%
CAAGCTGAATAAACATCATT+TGG + chr1_3:11183692-11183711 None:intergenic 30.0%
CAAATGATGTTTATTCAGCT+TGG - chr1_3:11183690-11183709 Msa0103790:intron 30.0%
GAAACAATCATAAAGAACTG+TGG - chr1_3:11183809-11183828 Msa0103790:intron 30.0%
TATGAAAGCAGAAACAACAT+AGG + chr1_3:11183939-11183958 None:intergenic 30.0%
TTCTCTTTGACATGAAAATC+AGG + chr1_3:11184002-11184021 None:intergenic 30.0%
TTAGAAACATACCTTAGTGT+TGG + chr1_3:11184464-11184483 None:intergenic 30.0%
ATATGGAGACTATAAAATCC+AGG + chr1_3:11184518-11184537 None:intergenic 30.0%
!!! ATTTTTTATGCCTGACATCA+TGG - chr1_3:11184579-11184598 Msa0103790:intron 30.0%
TAGCATATTGTACTTTCAGT+AGG - chr1_3:11184655-11184674 Msa0103790:intron 30.0%
! CTTTCAGTAGGTACTTTTAT+TGG - chr1_3:11184667-11184686 Msa0103790:intron 30.0%
TTCTGTATTTCAGTCAAACT+GGG + chr1_3:11184759-11184778 None:intergenic 30.0%
ATTCTGTATTTCAGTCAAAC+TGG + chr1_3:11184760-11184779 None:intergenic 30.0%
!! CAACTTACTTCTTTGTTGTT+AGG + chr1_3:11184831-11184850 None:intergenic 30.0%
!!! TTGTTTTGAGGATCCTTTAA+TGG - chr1_3:11185026-11185045 Msa0103790:intron 30.0%
AGGGAACAGGAAAAAAAATA+TGG + chr1_3:11185082-11185101 None:intergenic 30.0%
TGATATGGATAGTTATTCAC+AGG - chr1_3:11185130-11185149 Msa0103790:intron 30.0%
GATATGGATAGTTATTCACA+GGG - chr1_3:11185131-11185150 Msa0103790:intron 30.0%
TGATTACATGCTAAATTGTG+GGG - chr1_3:11185292-11185311 Msa0103790:intron 30.0%
!! ATAAAAGTTCTAAATGCCCT+TGG - chr1_3:11185400-11185419 Msa0103790:intron 30.0%
CTGTCTGGATTAATAGAAAA+TGG + chr1_3:11185513-11185532 None:intergenic 30.0%
TGGATGTGAAAACAAATGAA+AGG + chr1_3:11185570-11185589 None:intergenic 30.0%
TGACAGACCAGAATATAATT+GGG + chr1_3:11185643-11185662 None:intergenic 30.0%
TTGACAGACCAGAATATAAT+TGG + chr1_3:11185644-11185663 None:intergenic 30.0%
ATTAACAGTCTATTCTCTGT+TGG - chr1_3:11185668-11185687 Msa0103790:intron 30.0%
TTAACAGTCTATTCTCTGTT+GGG - chr1_3:11185669-11185688 Msa0103790:intron 30.0%
! ATATTTTCCAGCTGATAATC+GGG + chr1_3:11185699-11185718 None:intergenic 30.0%
ATTGAAGTGGAAACAAAGAA+TGG - chr1_3:11185979-11185998 Msa0103790:intron 30.0%
TTGAAGTGGAAACAAAGAAT+GGG - chr1_3:11185980-11185999 Msa0103790:intron 30.0%
!!! GAAATTTCGTTCCCATTTTT+TGG - chr1_3:11186015-11186034 Msa0103790:intron 30.0%
TCACAAATAGCCCAAAAAAT+GGG + chr1_3:11186029-11186048 None:intergenic 30.0%
ATCACAAATAGCCCAAAAAA+TGG + chr1_3:11186030-11186049 None:intergenic 30.0%
!!! ATTTTTTGGGCTATTTGTGA+TGG - chr1_3:11186029-11186048 Msa0103790:intron 30.0%
TATATCCACTTCTCAAACAA+TGG + chr1_3:11186073-11186092 None:intergenic 30.0%
! AGTTTATAGGATAGGAGTAT+AGG + chr1_3:11186127-11186146 None:intergenic 30.0%
GATGGAATAGTTTATAGGAT+AGG + chr1_3:11186135-11186154 None:intergenic 30.0%
TTAGACTTCAAGAACAAGTT+CGG + chr1_3:11186237-11186256 None:intergenic 30.0%
ATACATTAAACAAAGGCCAT+AGG + chr1_3:11186565-11186584 None:intergenic 30.0%
! CCTTTGTTTAATGTATCCAA+GGG - chr1_3:11186569-11186588 Msa0103790:intron 30.0%
CAGAAAACACTACAAGTAAA+TGG + chr1_3:11186616-11186635 None:intergenic 30.0%
GAAGTTTAATGTGTATCCAA+GGG - chr1_3:11186680-11186699 Msa0103790:CDS 30.0%
CTTCTTTCTACATTAGAATG+TGG - chr1_3:11187059-11187078 Msa0103790:intron 30.0%
! TGTTTTCTCTGTATTTTTCC+AGG - chr1_3:11187259-11187278 Msa0103790:intron 30.0%
! GTTTTCTCTGTATTTTTCCA+GGG - chr1_3:11187260-11187279 Msa0103790:intron 30.0%
TCAAAATGGAAATCAGATAG+AGG - chr1_3:11187374-11187393 Msa0103790:intron 30.0%
CGTAGTTTATCAATCAGATA+TGG - chr1_3:11187647-11187666 Msa0103790:intron 30.0%
TCATTATGTGTGTAAGATAG+AGG - chr1_3:11187730-11187749 Msa0103790:intron 30.0%
! ATAATTTGTGTGTGAGATAG+AGG - chr1_3:11188002-11188021 Msa0103790:intron 30.0%
! CATCAACTGATTCAATGTTT+GGG + chr1_3:11188240-11188259 None:intergenic 30.0%
TGTTGATATTGAGGAGTAAA+TGG + chr1_3:11188527-11188546 None:intergenic 30.0%
!! TTCTAAAAACGGGTTTTAGT+TGG - chr1_3:11188775-11188794 Msa0103790:intron 30.0%
! TAGTTGGTTCATGGAAAAAT+TGG - chr1_3:11188791-11188810 Msa0103790:intron 30.0%
!!! TGCCTCACTCTTTTATTTTT+TGG - chr1_3:11188934-11188953 Msa0103790:intron 30.0%
TTATACGTCTTATGTTCCAT+CGG - chr1_3:11189458-11189477 Msa0103790:intron 30.0%
TAGCATGTAAAAAACTGTCT+TGG - chr1_3:11189569-11189588 Msa0103790:intron 30.0%
AAACATCACAAGTTAGCAAA+CGG + chr1_3:11189607-11189626 None:intergenic 30.0%
CTAGAGGAAACATTGAAAAA+TGG - chr1_3:11189706-11189725 Msa0103790:intron 30.0%
AACATTGAAAAATGGAGAAC+TGG - chr1_3:11189714-11189733 Msa0103790:intron 30.0%
ACATTGAAAAATGGAGAACT+GGG - chr1_3:11189715-11189734 Msa0103790:intron 30.0%
! GTGGTGGAAACATTAAAATA+TGG - chr1_3:11189757-11189776 Msa0103790:CDS 30.0%
GTGGAAACATTAAAATATGG+AGG - chr1_3:11189760-11189779 Msa0103790:CDS 30.0%
TGTTAATAAATGAGAAGACG+GGG - chr1_3:11189816-11189835 Msa0103790:exon 30.0%
!! CTGTTTTGAATCTTCTTCGT+TGG - chr1_3:11180881-11180900 Msa0103790:three_prime_UTR 35.0%
AAGAAAGAAAAAAAACGCGG+GGG + chr1_3:11181026-11181045 None:intergenic 35.0%
CAAGAAAGAAAAAAAACGCG+GGG + chr1_3:11181027-11181046 None:intergenic 35.0%
CCAAGAAAGAAAAAAAACGC+GGG + chr1_3:11181028-11181047 None:intergenic 35.0%
!!! GAGGTTTTGAAATTTGAGCT+AGG - chr1_3:11181109-11181128 Msa0103790:three_prime_UTR 35.0%
! TTTTAGCGTAAACTGTGGAA+TGG - chr1_3:11181132-11181151 Msa0103790:three_prime_UTR 35.0%
TTTAGCGTAAACTGTGGAAT+GGG - chr1_3:11181133-11181152 Msa0103790:three_prime_UTR 35.0%
GGATTGTTTGGAAGAACTTA+TGG - chr1_3:11181253-11181272 Msa0103790:CDS 35.0%
GTATTGTCAATTGCAGATAG+CGG - chr1_3:11181314-11181333 Msa0103790:CDS 35.0%
AAATAGTGGTTATAGTAGCG+TGG + chr1_3:11181380-11181399 None:intergenic 35.0%
! TCTGAGTGGTTTCTATGTTT+TGG - chr1_3:11181563-11181582 Msa0103790:CDS 35.0%
!!! GGTTTCTATGTTTTGGTGAA+TGG - chr1_3:11181570-11181589 Msa0103790:CDS 35.0%
GCTCTATACTTCTGATAACT+CGG - chr1_3:11181750-11181769 Msa0103790:intron 35.0%
ATACTTCTGATAACTCGGTT+TGG - chr1_3:11181755-11181774 Msa0103790:intron 35.0%
GCTTGGTTGTTATGCTTATT+AGG - chr1_3:11181782-11181801 Msa0103790:intron 35.0%
TATGCTTATTAGGCAAGCAA+AGG - chr1_3:11181792-11181811 Msa0103790:intron 35.0%
! TTGTCAAAGGCATAAAGAAG+CGG - chr1_3:11181818-11181837 Msa0103790:intron 35.0%
ATCATCAAAGGCAAGTTTAC+TGG + chr1_3:11182354-11182373 None:intergenic 35.0%
!! ATGTGTTGTTTGGAAGTAGT+GGG - chr1_3:11182541-11182560 Msa0103790:intron 35.0%
TACTGAAAACATGGAATTGG+AGG - chr1_3:11182649-11182668 Msa0103790:intron 35.0%
CCATAAAACACTAGCTGAAA+TGG + chr1_3:11182848-11182867 None:intergenic 35.0%
! CCATTTCAGCTAGTGTTTTA+TGG - chr1_3:11182845-11182864 Msa0103790:intron 35.0%
GAAAGAAACGTAGAATGTTC+AGG - chr1_3:11183037-11183056 Msa0103790:intron 35.0%
AAACGTAGAATGTTCAGGAT+TGG - chr1_3:11183042-11183061 Msa0103790:intron 35.0%
GAAGCTTTCCATTACAAAGA+AGG - chr1_3:11183097-11183116 Msa0103790:intron 35.0%
AGAAGGGAGTCATGAAAATA+TGG - chr1_3:11183114-11183133 Msa0103790:intron 35.0%
TGAAAATATGGAGGCTTGAA+TGG - chr1_3:11183126-11183145 Msa0103790:intron 35.0%
!! GGGATGTTGCTTTATTATAG+TGG + chr1_3:11183186-11183205 None:intergenic 35.0%
AAAGCAACATCCCAAACATA+TGG - chr1_3:11183193-11183212 Msa0103790:intron 35.0%
AGGTCATTAATTGAGTAGCA+TGG + chr1_3:11183231-11183250 None:intergenic 35.0%
TGTGTACTTGTAAGGACAAT+TGG + chr1_3:11183261-11183280 None:intergenic 35.0%
GTCATTGTTGTGTACTTGTA+AGG + chr1_3:11183269-11183288 None:intergenic 35.0%
GGAAGGCCAAAAAAACTTAT+TGG + chr1_3:11183423-11183442 None:intergenic 35.0%
AGTAAGCAGGGTAATTAAGA+TGG + chr1_3:11183476-11183495 None:intergenic 35.0%
CTTAATTACCCTGCTTACTA+TGG - chr1_3:11183477-11183496 Msa0103790:intron 35.0%
TGTAGATTCCATAGTAAGCA+GGG + chr1_3:11183488-11183507 None:intergenic 35.0%
TTTGAACAAGCAGTGAGAAT+TGG + chr1_3:11183589-11183608 None:intergenic 35.0%
CATCATTTGGACAGGTAATA+AGG + chr1_3:11183679-11183698 None:intergenic 35.0%
TCATGTCAAAGAGAAGATAC+TGG - chr1_3:11184007-11184026 Msa0103790:intron 35.0%
!! TACTGGTTCTTGTAGATACT+TGG - chr1_3:11184024-11184043 Msa0103790:intron 35.0%
TAGTTGCCAAATATTCCTCT+TGG - chr1_3:11184139-11184158 Msa0103790:intron 35.0%
AGTTGCCAAATATTCCTCTT+GGG - chr1_3:11184140-11184159 Msa0103790:intron 35.0%
TCACACACAAACCCATAAAA+AGG + chr1_3:11184203-11184222 None:intergenic 35.0%
GCTGAAATAAGCAAATCCTT+TGG + chr1_3:11184292-11184311 None:intergenic 35.0%
AGTCTGAATTTCCAACACTA+AGG - chr1_3:11184450-11184469 Msa0103790:intron 35.0%
GGCACAACAATAACTCTATA+TGG + chr1_3:11184535-11184554 None:intergenic 35.0%
CCAAAGACTGAATTAGTGTT+TGG + chr1_3:11184556-11184575 None:intergenic 35.0%
CCAAACACTAATTCAGTCTT+TGG - chr1_3:11184553-11184572 Msa0103790:intron 35.0%
ACTGAAATACAGAATGCACA+TGG - chr1_3:11184765-11184784 Msa0103790:intron 35.0%
ACAGAATGCACATGGTATTA+TGG - chr1_3:11184773-11184792 Msa0103790:intron 35.0%
TGGTATTATGGATGTTCTTG+CGG - chr1_3:11184785-11184804 Msa0103790:intron 35.0%
AAGGATCCTCAAAACAAAGT+GGG + chr1_3:11185023-11185042 None:intergenic 35.0%
AAAGGATCCTCAAAACAAAG+TGG + chr1_3:11185024-11185043 None:intergenic 35.0%
GGTGTGGTTGTAACATTTAT+GGG - chr1_3:11185152-11185171 Msa0103790:intron 35.0%
TTATGGGATGAGACAAGTAT+AGG - chr1_3:11185168-11185187 Msa0103790:intron 35.0%
GATTACATGCTAAATTGTGG+GGG - chr1_3:11185293-11185312 Msa0103790:intron 35.0%
ATTCATTCAAACAAACAGCG+AGG - chr1_3:11185472-11185491 Msa0103790:intron 35.0%
GGTAGACTTTATATACTGTC+TGG + chr1_3:11185528-11185547 None:intergenic 35.0%
!! CATTTGTTTTCACATCCAAG+CGG - chr1_3:11185572-11185591 Msa0103790:intron 35.0%
CAACTTGCCCAATTATATTC+TGG - chr1_3:11185633-11185652 Msa0103790:intron 35.0%
TAACAGTCTATTCTCTGTTG+GGG - chr1_3:11185670-11185689 Msa0103790:intron 35.0%
AAACAAAGAATGGGATGGAA+TGG - chr1_3:11185989-11186008 Msa0103790:intron 35.0%
! ACAGGAGGTTATTGTTGATT+TGG - chr1_3:11186345-11186364 Msa0103790:CDS 35.0%
TAGAACATACAAGCAAAGAG+TGG - chr1_3:11186378-11186397 Msa0103790:CDS 35.0%
CATACGTAGTTGAGTTTACA+AGG + chr1_3:11186408-11186427 None:intergenic 35.0%
CTTGTAAACTCAACTACGTA+TGG - chr1_3:11186406-11186425 Msa0103790:intron 35.0%
TTGAAATTTGAAGAGCTCAG+TGG - chr1_3:11186504-11186523 Msa0103790:intron 35.0%
! GCCTTTGTTTAATGTATCCA+AGG - chr1_3:11186568-11186587 Msa0103790:intron 35.0%
CCCTTGGATACATTAAACAA+AGG + chr1_3:11186572-11186591 None:intergenic 35.0%
GGAAGTTTAATGTGTATCCA+AGG - chr1_3:11186679-11186698 Msa0103790:CDS 35.0%
CAGAAAACGCTACAAGTAAA+TGG + chr1_3:11186727-11186746 None:intergenic 35.0%
! TAATTGTGATGGAGAGTAGA+TGG + chr1_3:11186893-11186912 None:intergenic 35.0%
CAAGAATGGCATTTGAATGT+GGG + chr1_3:11186951-11186970 None:intergenic 35.0%
ACAAGAATGGCATTTGAATG+TGG + chr1_3:11186952-11186971 None:intergenic 35.0%
TGACAAAATAGATTCATGCC+TGG + chr1_3:11187343-11187362 None:intergenic 35.0%
! AGGCATGAATCTATTTTGTC+AGG - chr1_3:11187342-11187361 Msa0103790:intron 35.0%
TCAGGAACTTCTACTCAAAA+TGG - chr1_3:11187360-11187379 Msa0103790:intron 35.0%
TGTAGATATTGATGCTCCTT+TGG - chr1_3:11187425-11187444 Msa0103790:intron 35.0%
ATACTGGCAAACAAACTGAT+GGG - chr1_3:11187460-11187479 Msa0103790:intron 35.0%
AATGTAAAGAAAAGACAGGC+AGG + chr1_3:11187493-11187512 None:intergenic 35.0%
TCCATTAGTAATGTTTGTCC+TGG - chr1_3:11187577-11187596 Msa0103790:intron 35.0%
CACAAAAATGGTGACTTTGA+TGG + chr1_3:11187785-11187804 None:intergenic 35.0%
CACAAAAACAGCAACTTTGA+TGG + chr1_3:11188057-11188076 None:intergenic 35.0%
! GCATCAACTGATTCAATGTT+TGG + chr1_3:11188241-11188260 None:intergenic 35.0%
! TGCTGTTGTTGTTGATATTG+AGG + chr1_3:11188536-11188555 None:intergenic 35.0%
! ATTTTACCCCAATGGAAATG+TGG - chr1_3:11188580-11188599 Msa0103790:intron 35.0%
AGTGGAGAAGGGTAAAAAAA+CGG + chr1_3:11188823-11188842 None:intergenic 35.0%
ATCAGTCAATTAGTGGAGAA+GGG + chr1_3:11188834-11188853 None:intergenic 35.0%
TATCAGTCAATTAGTGGAGA+AGG + chr1_3:11188835-11188854 None:intergenic 35.0%
TTGACTGATATATGTTGGGT+TGG - chr1_3:11188845-11188864 Msa0103790:intron 35.0%
ATACATCTGTTGTGGATACA+TGG + chr1_3:11189310-11189329 None:intergenic 35.0%
ATGTATCCACAACAGATGTA+TGG - chr1_3:11189309-11189328 Msa0103790:intron 35.0%
ATGTATGGAAACCAATTTGC+AGG - chr1_3:11189324-11189343 Msa0103790:intron 35.0%
! TACATTTGCTGCTCAATGTA+TGG + chr1_3:11189384-11189403 None:intergenic 35.0%
TACATTGAGCAGCAAATGTA+TGG - chr1_3:11189384-11189403 Msa0103790:intron 35.0%
ATAAGACGTATAACCCTGAT+TGG + chr1_3:11189451-11189470 None:intergenic 35.0%
TATACGTCTTATGTTCCATC+GGG - chr1_3:11189459-11189478 Msa0103790:intron 35.0%
AAGCCAGAGGATAAGTTATT+CGG - chr1_3:11189492-11189511 Msa0103790:intron 35.0%
GTTAATAAATGAGAAGACGG+GGG - chr1_3:11189817-11189836 Msa0103790:exon 35.0%
TACCGTTGGAAGAAAGGTTT+GGG + chr1_3:11180757-11180776 None:intergenic 40.0%
ATACCGTTGGAAGAAAGGTT+TGG + chr1_3:11180758-11180777 None:intergenic 40.0%
!! GTTTAGTTTGGTGATACCGT+TGG + chr1_3:11180771-11180790 None:intergenic 40.0%
GCGATGAATTTGGAAGATTG+TGG + chr1_3:11180796-11180815 None:intergenic 40.0%
CAATCTTCCAAATTCATCGC+CGG - chr1_3:11180796-11180815 Msa0103790:three_prime_UTR 40.0%
AAAGATTCCGGCGATGAATT+TGG + chr1_3:11180806-11180825 None:intergenic 40.0%
!! GAATCTTCTTCGTTGGTGAT+CGG - chr1_3:11180888-11180907 Msa0103790:three_prime_UTR 40.0%
ATCGGAGATGGTGAATTCTA+TGG - chr1_3:11180906-11180925 Msa0103790:three_prime_UTR 40.0%
ACATGCTCAATCATGATCCT+GGG - chr1_3:11180992-11181011 Msa0103790:three_prime_UTR 40.0%
!!! CCCGCGTTTTTTTTCTTTCT+TGG - chr1_3:11181025-11181044 Msa0103790:three_prime_UTR 40.0%
!! CTAGGTTTTAGCGTAAACTG+TGG - chr1_3:11181127-11181146 Msa0103790:three_prime_UTR 40.0%
!! AGATAGCGGATAGAGGAAAA+TGG - chr1_3:11181328-11181347 Msa0103790:CDS 40.0%
! TTTTGGTGAATGGGAGAACT+GGG - chr1_3:11181580-11181599 Msa0103790:CDS 40.0%
!! TAACTCGGTTTGGTTATGCT+TGG - chr1_3:11181765-11181784 Msa0103790:intron 40.0%
! AAAGGCATAAAGAAGCGGAT+TGG - chr1_3:11181823-11181842 Msa0103790:intron 40.0%
CTTCACTTACAGTTAGTGCA+AGG + chr1_3:11181873-11181892 None:intergenic 40.0%
CTTGCACTAACTGTAAGTGA+AGG - chr1_3:11181871-11181890 Msa0103790:intron 40.0%
!! GATGTGTTGTTTGGAAGTAG+TGG - chr1_3:11182540-11182559 Msa0103790:intron 40.0%
!! TGTGTTGTTTGGAAGTAGTG+GGG - chr1_3:11182542-11182561 Msa0103790:intron 40.0%
GGTCTGTGTAGAACTTACTA+GGG + chr1_3:11182730-11182749 None:intergenic 40.0%
CATGACTCCCTTCTTTGTAA+TGG + chr1_3:11183108-11183127 None:intergenic 40.0%
AGGGAGTCATGAAAATATGG+AGG - chr1_3:11183117-11183136 Msa0103790:intron 40.0%
TAAGGACAATTGGAGTAGTG+AGG + chr1_3:11183251-11183270 None:intergenic 40.0%
AAGAGTTAGAGGCAATGGAT+TGG + chr1_3:11183386-11183405 None:intergenic 40.0%
TCATTGCTAAAGAGAGGTAG+AGG + chr1_3:11183444-11183463 None:intergenic 40.0%
GCAATGTCATTGCTAAAGAG+AGG + chr1_3:11183450-11183469 None:intergenic 40.0%
AGCAGGGTAATTAAGATGGA+GGG + chr1_3:11183472-11183491 None:intergenic 40.0%
AAGCAGGGTAATTAAGATGG+AGG + chr1_3:11183473-11183492 None:intergenic 40.0%
CTGTAGATTCCATAGTAAGC+AGG + chr1_3:11183489-11183508 None:intergenic 40.0%
CTGCTTACTATGGAATCTAC+AGG - chr1_3:11183487-11183506 Msa0103790:intron 40.0%
AATCTCGACTTAGGTGCTTT+GGG + chr1_3:11183528-11183547 None:intergenic 40.0%
! CAACTAGAAAGCATACCAAC+AGG + chr1_3:11183786-11183805 None:intergenic 40.0%
!! TTGGTATGCTTTCTAGTTGC+TGG - chr1_3:11183787-11183806 Msa0103790:intron 40.0%
! GATACTTGGCAAGAAGCTTT+TGG - chr1_3:11184038-11184057 Msa0103790:intron 40.0%
TATTGAGGATATCTTGCCCT+CGG + chr1_3:11184068-11184087 None:intergenic 40.0%
TGGTATGCAGCATAGTATTG+AGG + chr1_3:11184083-11184102 None:intergenic 40.0%
TCAATACTATGCTGCATACC+AGG - chr1_3:11184082-11184101 Msa0103790:intron 40.0%
TAAACATTACCAGCAGTTCC+TGG + chr1_3:11184103-11184122 None:intergenic 40.0%
GCAATCCCAAGAGGAATATT+TGG + chr1_3:11184148-11184167 None:intergenic 40.0%
AATATTCCTCTTGGGATTGC+TGG - chr1_3:11184148-11184167 Msa0103790:intron 40.0%
ATTTGCTTATTTCAGCGTGC+CGG - chr1_3:11184296-11184315 Msa0103790:intron 40.0%
CAGATTGATCAGATCTCTGA+GGG + chr1_3:11184331-11184350 None:intergenic 40.0%
GAAGTCAATGGTTGTGTTTG+TGG + chr1_3:11184371-11184390 None:intergenic 40.0%
! TTTGGAGGGTATGAAGTCAA+TGG + chr1_3:11184383-11184402 None:intergenic 40.0%
TTATCTAAAAGGTGGTTGCC+TGG - chr1_3:11184497-11184516 Msa0103790:intron 40.0%
GTATACAGAACCATGATGTC+AGG + chr1_3:11184592-11184611 None:intergenic 40.0%
GCTAAGTATCAACAACTTGC+AGG + chr1_3:11184639-11184658 None:intergenic 40.0%
AGGATCCTCAAAACAAAGTG+GGG + chr1_3:11185022-11185041 None:intergenic 40.0%
! AAAGTGCCCAAAGACTACAA+GGG + chr1_3:11185106-11185125 None:intergenic 40.0%
GGGTGTGGTTGTAACATTTA+TGG - chr1_3:11185151-11185170 Msa0103790:intron 40.0%
CTGTCAAACAACCATGTGAT+AGG - chr1_3:11185927-11185946 Msa0103790:CDS 40.0%
ACCATGTGATAGGCTATGTT+TGG - chr1_3:11185937-11185956 Msa0103790:CDS 40.0%
TCCAAACATAGCCTATCACA+TGG + chr1_3:11185941-11185960 None:intergenic 40.0%
AGTGGAAACAAAGAATGGGA+TGG - chr1_3:11185984-11186003 Msa0103790:intron 40.0%
GCATTCCATTGTTTGAGAAG+TGG - chr1_3:11186065-11186084 Msa0103790:intron 40.0%
TTCAAGAACAAGTTCGGAAG+GGG + chr1_3:11186231-11186250 None:intergenic 40.0%
CTTCAAGAACAAGTTCGGAA+GGG + chr1_3:11186232-11186251 None:intergenic 40.0%
ACTTCAAGAACAAGTTCGGA+AGG + chr1_3:11186233-11186252 None:intergenic 40.0%
TTACAACAGGTTCAGAAGGA+AGG + chr1_3:11186265-11186284 None:intergenic 40.0%
CACTTTACAACAGGTTCAGA+AGG + chr1_3:11186269-11186288 None:intergenic 40.0%
TGTCCTTTGCTTTCTGTTTC+AGG - chr1_3:11186315-11186334 Msa0103790:CDS 40.0%
GTCCTTTGCTTTCTGTTTCA+GGG - chr1_3:11186316-11186335 Msa0103790:CDS 40.0%
TCCTTTGCTTTCTGTTTCAG+GGG - chr1_3:11186317-11186336 Msa0103790:CDS 40.0%
!! GGAGGTTATTGTTGATTTGG+TGG - chr1_3:11186348-11186367 Msa0103790:CDS 40.0%
ATATCATAGAAGGGGATACG+AGG + chr1_3:11186432-11186451 None:intergenic 40.0%
TAGTTAGCATTAAGCACCCT+TGG + chr1_3:11186588-11186607 None:intergenic 40.0%
! AGGGTGCTTAATGCTAACTA+AGG - chr1_3:11186588-11186607 Msa0103790:intron 40.0%
GGGTGCTTAATGCTAACTAA+GGG - chr1_3:11186589-11186608 Msa0103790:intron 40.0%
TAGTTAGCATTAAGCACCCT+TGG + chr1_3:11186588-11186607 None:intergenic 40.0%
! AGGGTGCTTAATGCTAACTA+AGG - chr1_3:11186588-11186607 Msa0103790:intron 40.0%
GGGTGCTTAATGCTAACTAA+GGG - chr1_3:11186589-11186608 Msa0103790:intron 40.0%
TTGAATGTGGGTCACTAGAA+TGG + chr1_3:11186939-11186958 None:intergenic 40.0%
TTGTATGTGGGTCACAAGAA+TGG + chr1_3:11186965-11186984 None:intergenic 40.0%
!! TCTACATAGGAGGCACTTAA+GGG + chr1_3:11187023-11187042 None:intergenic 40.0%
AGAGTGTAGAAGGTCTACAT+AGG + chr1_3:11187036-11187055 None:intergenic 40.0%
AAAGAAGCTCAGAGTGTAGA+AGG + chr1_3:11187046-11187065 None:intergenic 40.0%
GTATCTCCAGTATCAACCAA+AGG + chr1_3:11187444-11187463 None:intergenic 40.0%
! TTGGTTGATACTGGAGATAC+TGG - chr1_3:11187444-11187463 Msa0103790:intron 40.0%
GATACTGGCAAACAAACTGA+TGG - chr1_3:11187459-11187478 Msa0103790:intron 40.0%
GCCAGGACAAACATTACTAA+TGG + chr1_3:11187581-11187600 None:intergenic 40.0%
AACTGAACTATTCGAAGGCA+TGG + chr1_3:11187958-11187977 None:intergenic 40.0%
ATAACAAATGTAGCCTGCAG+CGG + chr1_3:11188082-11188101 None:intergenic 40.0%
AACTAACCGGACTAATGTGA+TGG - chr1_3:11188142-11188161 Msa0103790:intron 40.0%
CCATAACCATCACATTAGTC+CGG + chr1_3:11188151-11188170 None:intergenic 40.0%
ACCAACCTACATATATGTGC+AGG - chr1_3:11188189-11188208 Msa0103790:intron 40.0%
ACCTGCACATATATGTAGGT+TGG + chr1_3:11188193-11188212 None:intergenic 40.0%
!! GCAAGTGAAGTATCTGCTTT+TGG + chr1_3:11188353-11188372 None:intergenic 40.0%
ATTCTGATCAGATACAGGAG+TGG + chr1_3:11188405-11188424 None:intergenic 40.0%
CATTTGCCACATTTCCATTG+GGG + chr1_3:11188589-11188608 None:intergenic 40.0%
GCATTTGCCACATTTCCATT+GGG + chr1_3:11188590-11188609 None:intergenic 40.0%
AGCATTTGCCACATTTCCAT+TGG + chr1_3:11188591-11188610 None:intergenic 40.0%
AATGGAAATGTGGCAAATGC+TGG - chr1_3:11188590-11188609 Msa0103790:intron 40.0%
ATATTACCATAAGGGGAAGC+TGG + chr1_3:11188695-11188714 None:intergenic 40.0%
!!! AACGGGTTTTAGTTGGTTCA+TGG - chr1_3:11188782-11188801 Msa0103790:intron 40.0%
TTGATAGGTGCGCAAAATAG+TGG - chr1_3:11188958-11188977 Msa0103790:intron 40.0%
TGTACATGACTGAATTGAGG+TGG + chr1_3:11189078-11189097 None:intergenic 40.0%
CTCTGTACATGACTGAATTG+AGG + chr1_3:11189081-11189100 None:intergenic 40.0%
TACATGCAGCCAAATGCTAA+CGG - chr1_3:11189156-11189175 Msa0103790:intron 40.0%
! GGTTATTGACTGCTGACATA+TGG + chr1_3:11189182-11189201 None:intergenic 40.0%
TATGTCAGCAGTCAATAACC+AGG - chr1_3:11189182-11189201 Msa0103790:intron 40.0%
! CAGGTTGGAAGCAATCAATT+GGG - chr1_3:11189201-11189220 Msa0103790:intron 40.0%
TGGTTTCCATACATCTGTTG+TGG + chr1_3:11189318-11189337 None:intergenic 40.0%
GGAAACCAATTTGCAGGTTA+TGG - chr1_3:11189330-11189349 Msa0103790:intron 40.0%
CAATTTGCAGGTTATGGCTA+CGG - chr1_3:11189336-11189355 Msa0103790:intron 40.0%
TACGGTCAACAACAACAACA+GGG - chr1_3:11189354-11189373 Msa0103790:intron 40.0%
ATACGTCTTATGTTCCATCG+GGG - chr1_3:11189460-11189479 Msa0103790:intron 40.0%
GAATAACTTATCCTCTGGCT+TGG + chr1_3:11189493-11189512 None:intergenic 40.0%
AGCCAGAGGATAAGTTATTC+GGG - chr1_3:11189493-11189512 Msa0103790:intron 40.0%
TAAGTTATTCGGGGATCTTG+TGG - chr1_3:11189503-11189522 Msa0103790:intron 40.0%
AAAAATGGAGAACTGGGAGT+GGG - chr1_3:11189721-11189740 Msa0103790:CDS 40.0%
ATTCACCTTTGGTACTCCTA+AGG - chr1_3:11189944-11189963 Msa0103790:five_prime_UTR 40.0%
!! CAAAACCTTAGGAGTACCAA+AGG + chr1_3:11189952-11189971 None:intergenic 40.0%
ACCCCAAACCTTTCTTCCAA+CGG - chr1_3:11180752-11180771 Msa0103790:three_prime_UTR 45.0%
ACCGTTGGAAGAAAGGTTTG+GGG + chr1_3:11180756-11180775 None:intergenic 45.0%
TGGTGATACCGTTGGAAGAA+AGG + chr1_3:11180763-11180782 None:intergenic 45.0%
ATGCGATCGGAGAAAGATTC+CGG + chr1_3:11180818-11180837 None:intergenic 45.0%
GAATCTTTCTCCGATCGCAT+CGG - chr1_3:11180818-11180837 Msa0103790:three_prime_UTR 45.0%
TCGATGTTCATAGCCCAATC+GGG + chr1_3:11180964-11180983 None:intergenic 45.0%
CTCGATGTTCATAGCCCAAT+CGG + chr1_3:11180965-11180984 None:intergenic 45.0%
GACATGCTCAATCATGATCC+TGG - chr1_3:11180991-11181010 Msa0103790:three_prime_UTR 45.0%
!! CAATTGCAGATAGCGGATAG+AGG - chr1_3:11181321-11181340 Msa0103790:CDS 45.0%
! TAGCGGATAGAGGAAAATGG+CGG - chr1_3:11181331-11181350 Msa0103790:CDS 45.0%
!! GTTTTGGTGAATGGGAGAAC+TGG - chr1_3:11181579-11181598 Msa0103790:CDS 45.0%
CAAGCAAAGGACGTTGTCAA+AGG - chr1_3:11181805-11181824 Msa0103790:intron 45.0%
!!! GTTTTTGGGGGCTCTGAAAA+TGG + chr1_3:11182397-11182416 None:intergenic 45.0%
!! GTGTTGTTTGGAAGTAGTGG+GGG - chr1_3:11182543-11182562 Msa0103790:intron 45.0%
! TGTTGTTTGGAAGTAGTGGG+GGG - chr1_3:11182544-11182563 Msa0103790:intron 45.0%
TTCAATTCCAAACGACCGAC+AGG + chr1_3:11182575-11182594 None:intergenic 45.0%
ACTAGGGTGAAATGCAACAC+TGG + chr1_3:11182714-11182733 None:intergenic 45.0%
CGGTCTGTGTAGAACTTACT+AGG + chr1_3:11182731-11182750 None:intergenic 45.0%
GAGGCTTGAATGGAATTGAG+CGG - chr1_3:11183136-11183155 Msa0103790:intron 45.0%
! AAGCCAAGTCTTATCCCACT+AGG - chr1_3:11183300-11183319 Msa0103790:CDS 45.0%
! CAAGTCTTATCCCACTAGGT+GGG - chr1_3:11183304-11183323 Msa0103790:CDS 45.0%
! AAGTCTTATCCCACTAGGTG+GGG - chr1_3:11183305-11183324 Msa0103790:CDS 45.0%
TGCTAAAGAGAGGTAGAGGA+AGG + chr1_3:11183440-11183459 None:intergenic 45.0%
! TTAGGTGCTTTGGGCATGTA+TGG + chr1_3:11183519-11183538 None:intergenic 45.0%
GAATCTCGACTTAGGTGCTT+TGG + chr1_3:11183529-11183548 None:intergenic 45.0%
CAGTGAGAATTGGAGTAGTG+GGG + chr1_3:11183579-11183598 None:intergenic 45.0%
GCAGTGAGAATTGGAGTAGT+GGG + chr1_3:11183580-11183599 None:intergenic 45.0%
AGCAGTGAGAATTGGAGTAG+TGG + chr1_3:11183581-11183600 None:intergenic 45.0%
! CAGGTAATAAGGTACTCCGA+CGG + chr1_3:11183668-11183687 None:intergenic 45.0%
!! TGGGAGCATTCTCTATAGTC+TGG - chr1_3:11183710-11183729 Msa0103790:intron 45.0%
GAGAGATGTGCTTCATGAGA+TGG - chr1_3:11183859-11183878 Msa0103790:intron 45.0%
! ACTTGGCAAGAAGCTTTTGG+AGG - chr1_3:11184041-11184060 Msa0103790:intron 45.0%
GCAGATTGATCAGATCTCTG+AGG + chr1_3:11184332-11184351 None:intergenic 45.0%
GTTTGTGGAGGAGTGAATAC+AGG + chr1_3:11184356-11184375 None:intergenic 45.0%
GTCAATGGTTGTGTTTGTGG+AGG + chr1_3:11184368-11184387 None:intergenic 45.0%
TGGAAATTCAGACTCTGCAG+AGG + chr1_3:11184444-11184463 None:intergenic 45.0%
!!! TCAGTCCCCACTTTGTTTTG+AGG - chr1_3:11185014-11185033 Msa0103790:intron 45.0%
TTCCCTTCCCTTGTAGTCTT+TGG - chr1_3:11185096-11185115 Msa0103790:intron 45.0%
TCCCTTCCCTTGTAGTCTTT+GGG - chr1_3:11185097-11185116 Msa0103790:intron 45.0%
!! GAAAGTGCCCAAAGACTACA+AGG + chr1_3:11185107-11185126 None:intergenic 45.0%
TTGGGCACTTTCTGCTGATA+TGG - chr1_3:11185115-11185134 Msa0103790:intron 45.0%
GGATAGTTATTCACAGGGTG+TGG - chr1_3:11185136-11185155 Msa0103790:intron 45.0%
GGGGATATAAAACTTCTCGC+AGG - chr1_3:11185312-11185331 Msa0103790:intron 45.0%
TCCCATTAACTAGATTCCCG+CGG + chr1_3:11185370-11185389 None:intergenic 45.0%
! ACACAATTTTCTGCTCCGCT+TGG + chr1_3:11185590-11185609 None:intergenic 45.0%
!! AACTAGAGAGAGAGCACTTC+TGG + chr1_3:11186865-11186884 None:intergenic 45.0%
!! GTCTACATAGGAGGCACTTA+AGG + chr1_3:11187024-11187043 None:intergenic 45.0%
GTGTAGAAGGTCTACATAGG+AGG + chr1_3:11187033-11187052 None:intergenic 45.0%
GATGAATCACTGCTATGCCA+GGG - chr1_3:11187282-11187301 Msa0103790:intron 45.0%
ATTCAAAGCCTGCATCTGCT+CGG - chr1_3:11187397-11187416 Msa0103790:intron 45.0%
! GATGCTCCTTTGGTTGATAC+TGG - chr1_3:11187435-11187454 Msa0103790:intron 45.0%
ACAACAAAAGTAGCCTGCAG+CGG + chr1_3:11187810-11187829 None:intergenic 45.0%
TAACAAATGTAGCCTGCAGC+GGG + chr1_3:11188081-11188100 None:intergenic 45.0%
CCGGACTAATGTGATGGTTA+TGG - chr1_3:11188148-11188167 Msa0103790:intron 45.0%
GAGGACCTGCACATATATGT+AGG + chr1_3:11188197-11188216 None:intergenic 45.0%
TATATGTGCAGGTCCTCTTC+TGG - chr1_3:11188200-11188219 Msa0103790:intron 45.0%
GCCAGCTACTTCTAATGGTT+CGG - chr1_3:11188268-11188287 Msa0103790:intron 45.0%
CATAGTTATCACCACTGAGC+AGG + chr1_3:11188325-11188344 None:intergenic 45.0%
TCACTTGCTCTTGTTCCTCT+AGG - chr1_3:11188365-11188384 Msa0103790:intron 45.0%
! AGGGCATTCTGATCAGATAC+AGG + chr1_3:11188410-11188429 None:intergenic 45.0%
GAGGAGTAAATGGACCAGAT+TGG + chr1_3:11188517-11188536 None:intergenic 45.0%
CAGCAGACATTCACATCTCA+AGG - chr1_3:11188554-11188573 Msa0103790:intron 45.0%
CAGACATTCACATCTCAAGG+TGG - chr1_3:11188557-11188576 Msa0103790:intron 45.0%
!! CAAGGTGGATTTTACCCCAA+TGG - chr1_3:11188572-11188591 Msa0103790:intron 45.0%
TGCAGTGATTGCTCATACTG+AGG + chr1_3:11188620-11188639 None:intergenic 45.0%
!! ATATATGTTGGGTTGGTGCG+TGG - chr1_3:11188852-11188871 Msa0103790:CDS 45.0%
TGACTGAATTGAGGTGGTTG+TGG + chr1_3:11189072-11189091 None:intergenic 45.0%
ACAGAGTTCCGCAAATCATC+AGG - chr1_3:11189095-11189114 Msa0103790:intron 45.0%
CAGAGTTCCGCAAATCATCA+GGG - chr1_3:11189096-11189115 Msa0103790:intron 45.0%
AGAGTTCCGCAAATCATCAG+GGG - chr1_3:11189097-11189116 Msa0103790:intron 45.0%
GACATATGGCCGTTAGCATT+TGG + chr1_3:11189168-11189187 None:intergenic 45.0%
TCAGCAGTCAATAACCAGGT+TGG - chr1_3:11189186-11189205 Msa0103790:intron 45.0%
CCAATTGATTGCTTCCAACC+TGG + chr1_3:11189203-11189222 None:intergenic 45.0%
! CCAGGTTGGAAGCAATCAAT+TGG - chr1_3:11189200-11189219 Msa0103790:intron 45.0%
CAACACCTTGCATATGCTGA+GGG + chr1_3:11189233-11189252 None:intergenic 45.0%
!! AGCATATGCAAGGTGTTGCA+GGG - chr1_3:11189235-11189254 Msa0103790:intron 45.0%
ATGGCTTCACATCAAGCACA+AGG - chr1_3:11189270-11189289 Msa0103790:intron 45.0%
CGTAGCCATAACCTGCAAAT+TGG + chr1_3:11189338-11189357 None:intergenic 45.0%
CTACGGTCAACAACAACAAC+AGG - chr1_3:11189353-11189372 Msa0103790:intron 45.0%
CGAAACTCCAGTTCCAATCA+GGG - chr1_3:11189435-11189454 Msa0103790:intron 45.0%
CGTATAACCCTGATTGGAAC+TGG + chr1_3:11189445-11189464 None:intergenic 45.0%
!! AACTTATCCTCTGGCTTGGA+AGG + chr1_3:11189489-11189508 None:intergenic 45.0%
GCCAGAGGATAAGTTATTCG+GGG - chr1_3:11189494-11189513 Msa0103790:intron 45.0%
TCCCCGAATAACTTATCCTC+TGG + chr1_3:11189498-11189517 None:intergenic 45.0%
GAAAAATGGAGAACTGGGAG+TGG - chr1_3:11189720-11189739 Msa0103790:CDS 45.0%
AAAATGGAGAACTGGGAGTG+GGG - chr1_3:11189722-11189741 Msa0103790:CDS 45.0%
!! TCTTCGTTGGTGATCGGAGA+TGG - chr1_3:11180894-11180913 Msa0103790:three_prime_UTR 50.0%
ATATGCTCATCGGTCCCGAT+TGG - chr1_3:11180947-11180966 Msa0103790:three_prime_UTR 50.0%
TATGCTCATCGGTCCCGATT+GGG - chr1_3:11180948-11180967 Msa0103790:three_prime_UTR 50.0%
TCGGGCACGTATATTACAGC+AGG + chr1_3:11181472-11181491 None:intergenic 50.0%
GGGTGAAATGCAACACTGGT+AGG + chr1_3:11182710-11182729 None:intergenic 50.0%
CCACCTAGTGGGATAAGACT+TGG + chr1_3:11183306-11183325 None:intergenic 50.0%
! CCAAGTCTTATCCCACTAGG+TGG - chr1_3:11183303-11183322 Msa0103790:CDS 50.0%
TTTAGTCGACCCCACCTAGT+GGG + chr1_3:11183317-11183336 None:intergenic 50.0%
ATTTAGTCGACCCCACCTAG+TGG + chr1_3:11183318-11183337 None:intergenic 50.0%
ACTAGGTGGGGTCGACTAAA+TGG - chr1_3:11183317-11183336 Msa0103790:CDS 50.0%
!! AAGAAGCTTTTGGAGGACCG+AGG - chr1_3:11184048-11184067 Msa0103790:intron 50.0%
!! AGAAGCTTTTGGAGGACCGA+GGG - chr1_3:11184049-11184068 Msa0103790:intron 50.0%
ATTCCTCTTGGGATTGCTGG+TGG - chr1_3:11184151-11184170 Msa0103790:intron 50.0%
TTCCTCTTGGGATTGCTGGT+GGG - chr1_3:11184152-11184171 Msa0103790:intron 50.0%
! TCTCTGAGGGAATACTGCTC+CGG + chr1_3:11184318-11184337 None:intergenic 50.0%
CCGCATCACGTATGTTTGGA+GGG + chr1_3:11184397-11184416 None:intergenic 50.0%
CCCTCCAAACATACGTGATG+CGG - chr1_3:11184394-11184413 Msa0103790:intron 50.0%
TCCGCATCACGTATGTTTGG+AGG + chr1_3:11184398-11184417 None:intergenic 50.0%
GCATCCGCATCACGTATGTT+TGG + chr1_3:11184401-11184420 None:intergenic 50.0%
ACATACGTGATGCGGATGCT+CGG - chr1_3:11184402-11184421 Msa0103790:intron 50.0%
AGACTACAAGGGAAGGGAAC+AGG + chr1_3:11185095-11185114 None:intergenic 50.0%
GCCCAAAGACTACAAGGGAA+GGG + chr1_3:11185101-11185120 None:intergenic 50.0%
TGCCCAAAGACTACAAGGGA+AGG + chr1_3:11185102-11185121 None:intergenic 50.0%
CTCGCAGGTCACACATCAAA+AGG - chr1_3:11185327-11185346 Msa0103790:intron 50.0%
CCATTAACTAGATTCCCGCG+GGG + chr1_3:11185368-11185387 None:intergenic 50.0%
CCCATTAACTAGATTCCCGC+GGG + chr1_3:11185369-11185388 None:intergenic 50.0%
CCCGCGGGAATCTAGTTAAT+GGG - chr1_3:11185366-11185385 Msa0103790:intron 50.0%
AGGGGAAACATGGAAAGGGA+TGG + chr1_3:11186213-11186232 None:intergenic 50.0%
CGGAAGGGGAAACATGGAAA+GGG + chr1_3:11186217-11186236 None:intergenic 50.0%
TCGGAAGGGGAAACATGGAA+AGG + chr1_3:11186218-11186237 None:intergenic 50.0%
CAAGTTCGGAAGGGGAAACA+TGG + chr1_3:11186223-11186242 None:intergenic 50.0%
GCCCCTGAAACAGAAAGCAA+AGG + chr1_3:11186321-11186340 None:intergenic 50.0%
TCTGTTTCAGGGGCTTAGAC+AGG - chr1_3:11186327-11186346 Msa0103790:CDS 50.0%
GACTCCTTAGGTCAAGCCTA+TGG - chr1_3:11186546-11186565 Msa0103790:intron 50.0%
AAGGCCATAGGCTTGACCTA+AGG + chr1_3:11186553-11186572 None:intergenic 50.0%
GCATAGCAGTGATTCATCCC+TGG + chr1_3:11187280-11187299 None:intergenic 50.0%
GGATGAATCACTGCTATGCC+AGG - chr1_3:11187281-11187300 Msa0103790:intron 50.0%
CATCATTGAGAGCTAGTCCC+TGG + chr1_3:11187302-11187321 None:intergenic 50.0%
CTGGCAAACAAACTGATGGG+AGG - chr1_3:11187463-11187482 Msa0103790:intron 50.0%
CAACAAAAGTAGCCTGCAGC+GGG + chr1_3:11187809-11187828 None:intergenic 50.0%
GCCGAACCATTAGAAGTAGC+TGG + chr1_3:11188272-11188291 None:intergenic 50.0%
TGCCAAAGCTGATCCCAAGT+GGG - chr1_3:11188298-11188317 Msa0103790:intron 50.0%
! GCAGGTTGTTGTTCTCCTAG+AGG + chr1_3:11188383-11188402 None:intergenic 50.0%
TGATCAGATACAGGAGTGGC+AGG + chr1_3:11188401-11188420 None:intergenic 50.0%
!! ATTAGGTTGCTGGGTTGGCT+GGG + chr1_3:11188486-11188505 None:intergenic 50.0%
! CCAACATTAGGTTGCTGGGT+TGG + chr1_3:11188491-11188510 None:intergenic 50.0%
CCAACCCAGCAACCTAATGT+TGG - chr1_3:11188488-11188507 Msa0103790:intron 50.0%
ACCCAGCAACCTAATGTTGG+TGG - chr1_3:11188491-11188510 Msa0103790:intron 50.0%
! GCCACCAACATTAGGTTGCT+GGG + chr1_3:11188495-11188514 None:intergenic 50.0%
! CCAGATTGGCCACCAACATT+AGG + chr1_3:11188503-11188522 None:intergenic 50.0%
!! CCTAATGTTGGTGGCCAATC+TGG - chr1_3:11188500-11188519 Msa0103790:intron 50.0%
TTCAGCAACCTGACCATTCC+AGG + chr1_3:11188663-11188682 None:intergenic 50.0%
CAACAACCAGCTTCCCCTTA+TGG - chr1_3:11188686-11188705 Msa0103790:intron 50.0%
TGTGGATACTGAGGTGGTAG+TGG + chr1_3:11189054-11189073 None:intergenic 50.0%
TGAGGTGGTTGTGGATACTG+AGG + chr1_3:11189063-11189082 None:intergenic 50.0%
TTGAGGCCCCTGATGATTTG+CGG + chr1_3:11189106-11189125 None:intergenic 50.0%
TGGCCATAACCCATTGCTTG+AGG + chr1_3:11189123-11189142 None:intergenic 50.0%
!! TCAAGCAATGGGTTATGGCC+AGG - chr1_3:11189122-11189141 Msa0103790:intron 50.0%
ATGCACCCTCAGCATATGCA+AGG - chr1_3:11189225-11189244 Msa0103790:intron 50.0%
GCAACACCTTGCATATGCTG+AGG + chr1_3:11189234-11189253 None:intergenic 50.0%
!! CAGCATATGCAAGGTGTTGC+AGG - chr1_3:11189234-11189253 Msa0103790:intron 50.0%
GCTTCACATCAAGCACAAGG+TGG - chr1_3:11189273-11189292 Msa0103790:intron 50.0%
GCGAAACTCCAGTTCCAATC+AGG - chr1_3:11189434-11189453 Msa0103790:intron 50.0%
ATTCGGGGATCTTGTGGACA+TGG - chr1_3:11189509-11189528 Msa0103790:intron 50.0%
GTGAAGCCGAAAACAACTCC+AGG - chr1_3:11189537-11189556 Msa0103790:intron 50.0%
!! GCTCGACCTGGAGTTGTTTT+CGG + chr1_3:11189546-11189565 None:intergenic 50.0%
AAAACAACTCCAGGTCGAGC+TGG - chr1_3:11189546-11189565 Msa0103790:intron 50.0%
AAATGGAGAACTGGGAGTGG+GGG - chr1_3:11189723-11189742 Msa0103790:CDS 50.0%
! AAATGAGAAGACGGGGGCAT+TGG - chr1_3:11189823-11189842 Msa0103790:five_prime_UTR 50.0%
!! AATGAGAAGACGGGGGCATT+GGG - chr1_3:11189824-11189843 Msa0103790:five_prime_UTR 50.0%
TCTTTCTCCGATCGCATCGG+TGG - chr1_3:11180821-11180840 Msa0103790:three_prime_UTR 55.0%
GCCACGAGCGATATGCTCAT+CGG - chr1_3:11180937-11180956 Msa0103790:three_prime_UTR 55.0%
ACCGATGAGCATATCGCTCG+TGG + chr1_3:11180941-11180960 None:intergenic 55.0%
TGGTGAATGGGAGAACTGGG+TGG - chr1_3:11181583-11181602 Msa0103790:CDS 55.0%
TAGTGGGGGGAAGTTCCTGT+CGG - chr1_3:11182557-11182576 Msa0103790:intron 55.0%
GGAAGTTCCTGTCGGTCGTT+TGG - chr1_3:11182565-11182584 Msa0103790:intron 55.0%
TGCTGCATACCAGGAACTGC+TGG - chr1_3:11184091-11184110 Msa0103790:intron 55.0%
TCCTCTTGGGATTGCTGGTG+GGG - chr1_3:11184153-11184172 Msa0103790:intron 55.0%
AACTAGATTCCCGCGGGGTA+GGG + chr1_3:11185363-11185382 None:intergenic 55.0%
TAACTAGATTCCCGCGGGGT+AGG + chr1_3:11185364-11185383 None:intergenic 55.0%
CCCCGCGGGAATCTAGTTAA+TGG - chr1_3:11185365-11185384 Msa0103790:intron 55.0%
GTTTCAGGGGCTTAGACAGG+AGG - chr1_3:11186330-11186349 Msa0103790:CDS 55.0%
GAGCGTTTGCTCGACTCCTT+AGG - chr1_3:11186534-11186553 Msa0103790:intron 55.0%
ATCTGCAGCGTCTACTTGCC+AGG - chr1_3:11187322-11187341 Msa0103790:intron 55.0%
ACAAGTTGCCGAGCAGATGC+AGG + chr1_3:11187408-11187427 None:intergenic 55.0%
CCTGCAGCGGGACACAAAAA+TGG + chr1_3:11187797-11187816 None:intergenic 55.0%
!! CCATTTTTGTGTCCCGCTGC+AGG - chr1_3:11187794-11187813 Msa0103790:intron 55.0%
!!! CTGTTTTTGTGTCCCGCTGC+AGG - chr1_3:11188066-11188085 Msa0103790:intron 55.0%
! TCCTCTTCTGGTGCTGAAGC+AGG - chr1_3:11188212-11188231 Msa0103790:intron 55.0%
! CCTCTTCTGGTGCTGAAGCA+GGG - chr1_3:11188213-11188232 Msa0103790:intron 55.0%
CCATTAGAAGTAGCTGGCGC+AGG + chr1_3:11188266-11188285 None:intergenic 55.0%
CCTGCGCCAGCTACTTCTAA+TGG - chr1_3:11188263-11188282 Msa0103790:intron 55.0%
! CACTTGGGATCAGCTTTGGC+AGG + chr1_3:11188299-11188318 None:intergenic 55.0%
CTGCCAAAGCTGATCCCAAG+TGG - chr1_3:11188297-11188316 Msa0103790:intron 55.0%
GTCCCACTTGGGATCAGCTT+TGG + chr1_3:11188303-11188322 None:intergenic 55.0%
!! TTGCTGGGTTGGCTGGGTAT+TGG + chr1_3:11188480-11188499 None:intergenic 55.0%
!! CATTAGGTTGCTGGGTTGGC+TGG + chr1_3:11188487-11188506 None:intergenic 55.0%
! GGCCACCAACATTAGGTTGC+TGG + chr1_3:11188496-11188515 None:intergenic 55.0%
AGTACAGCTCCTGCCTGGAA+TGG - chr1_3:11188647-11188666 Msa0103790:intron 55.0%
GGTGGTTGTGGATACTGAGG+TGG + chr1_3:11189060-11189079 None:intergenic 55.0%
TCATCAGGGGCCTCAAGCAA+TGG - chr1_3:11189110-11189129 Msa0103790:intron 55.0%
CATCAGGGGCCTCAAGCAAT+GGG - chr1_3:11189111-11189130 Msa0103790:intron 55.0%
!! GGGCCTCAAGCAATGGGTTA+TGG - chr1_3:11189117-11189136 Msa0103790:intron 55.0%
GCATGTACATACCACCAGCC+TGG + chr1_3:11189143-11189162 None:intergenic 55.0%
! AGGTGTTGCAGGGCACTACA+TGG - chr1_3:11189245-11189264 Msa0103790:intron 55.0%
! GGTGTTGCAGGGCACTACAT+GGG - chr1_3:11189246-11189265 Msa0103790:intron 55.0%
TCAAGCACAAGGTGGTCCTG+CGG - chr1_3:11189281-11189300 Msa0103790:intron 55.0%
TGTGGATACATGGAAGCCGC+AGG + chr1_3:11189300-11189319 None:intergenic 55.0%
TACATGCTACCAGCTCGACC+TGG + chr1_3:11189558-11189577 None:intergenic 55.0%
AGTGGGGGAGAAAGAGCAAG+TGG - chr1_3:11189738-11189757 Msa0103790:CDS 55.0%
! CTCCGATCGCATCGGTGGTT+CGG - chr1_3:11180826-11180845 Msa0103790:three_prime_UTR 60.0%
GACCGAACCACCGATGCGAT+CGG + chr1_3:11180831-11180850 None:intergenic 60.0%
!! CGCATCGGTGGTTCGGTCTA+CGG - chr1_3:11180833-11180852 Msa0103790:three_prime_UTR 60.0%
!! GTGGTTCGGTCTACGGTCGT+CGG - chr1_3:11180840-11180859 Msa0103790:three_prime_UTR 60.0%
CCTCTTGGGATTGCTGGTGG+GGG - chr1_3:11184154-11184173 Msa0103790:intron 60.0%
CTCTTGGGATTGCTGGTGGG+GGG - chr1_3:11184155-11184174 Msa0103790:intron 60.0%
TCTTGGGATTGCTGGTGGGG+GGG - chr1_3:11184156-11184175 Msa0103790:intron 60.0%
ACTAGATTCCCGCGGGGTAG+GGG + chr1_3:11185362-11185381 None:intergenic 60.0%
GGGGTGACCCGATTATCAGC+TGG - chr1_3:11185689-11185708 Msa0103790:intron 60.0%
CCCTGCTTCAGCACCAGAAG+AGG + chr1_3:11188216-11188235 None:intergenic 60.0%
CCACTGAGCAGGTCCCACTT+GGG + chr1_3:11188314-11188333 None:intergenic 60.0%
ACCACTGAGCAGGTCCCACT+TGG + chr1_3:11188315-11188334 None:intergenic 60.0%
!! GGCTGGGTATTGGCAGACGT+AGG + chr1_3:11188470-11188489 None:intergenic 60.0%
CGCAAAGTACAGCTCCTGCC+TGG - chr1_3:11188642-11188661 Msa0103790:intron 60.0%
AGCTCCTGCCTGGAATGGTC+AGG - chr1_3:11188652-11188671 Msa0103790:intron 60.0%
GCAACCTGACCATTCCAGGC+AGG + chr1_3:11188659-11188678 None:intergenic 60.0%
!! GGGTTGGTGCGTGGAGTGAA+TGG - chr1_3:11188861-11188880 Msa0103790:CDS 60.0%
GAAGCTCAACCGGCCGACAA+TGG - chr1_3:11189003-11189022 Msa0103790:intron 60.0%
TGCCACCGGACTGCCATTGT+CGG + chr1_3:11189019-11189038 None:intergenic 60.0%
GGATACTGACCACCTGCCAC+CGG + chr1_3:11189033-11189052 None:intergenic 60.0%
!! GCAATGGGTTATGGCCAGGC+TGG - chr1_3:11189126-11189145 Msa0103790:intron 60.0%
! ATGGGTTATGGCCAGGCTGG+TGG - chr1_3:11189129-11189148 Msa0103790:intron 60.0%
! TGCAGGGCACTACATGGGCA+TGG - chr1_3:11189251-11189270 Msa0103790:intron 60.0%
GGGGGAGAAAGAGCAAGTGG+TGG - chr1_3:11189741-11189760 Msa0103790:CDS 60.0%
CCCCCACCAGCAATCCCAAG+AGG + chr1_3:11184157-11184176 None:intergenic 65.0%
GCAGAGGTCTCAGCTGCGTC+TGG + chr1_3:11184428-11184447 None:intergenic 65.0%
! TTTTCCAGCCCCCTACCCCG+CGG - chr1_3:11185350-11185369 Msa0103790:intron 65.0%
CTAGATTCCCGCGGGGTAGG+GGG + chr1_3:11185361-11185380 None:intergenic 65.0%
CCCAAGTGGGACCTGCTCAG+TGG - chr1_3:11188311-11188330 Msa0103790:intron 65.0%
ATCATTGCCCCCGCCTCCCT+GGG - chr1_3:11188981-11189000 Msa0103790:intron 65.0%
TTGAGCTTCCCAGGGAGGCG+GGG + chr1_3:11188992-11189011 None:intergenic 65.0%
GTTGAGCTTCCCAGGGAGGC+GGG + chr1_3:11188993-11189012 None:intergenic 65.0%
GGTTGAGCTTCCCAGGGAGG+CGG + chr1_3:11188994-11189013 None:intergenic 65.0%
GCCTCCCTGGGAAGCTCAAC+CGG - chr1_3:11188993-11189012 Msa0103790:intron 65.0%
TCGGCCGGTTGAGCTTCCCA+GGG + chr1_3:11189000-11189019 None:intergenic 65.0%
ACCGGCCGACAATGGCAGTC+CGG - chr1_3:11189011-11189030 Msa0103790:intron 65.0%
ACCGGACTGCCATTGTCGGC+CGG + chr1_3:11189015-11189034 None:intergenic 65.0%
GACAATGGCAGTCCGGTGGC+AGG - chr1_3:11189018-11189037 Msa0103790:intron 65.0%
AATGGCAGTCCGGTGGCAGG+TGG - chr1_3:11189021-11189040 Msa0103790:intron 65.0%
GGCTTGGAAGGCTTCCCCGA+TGG + chr1_3:11189477-11189496 None:intergenic 65.0%
GGGGAAGCCTTCCAAGCCAG+AGG - chr1_3:11189479-11189498 Msa0103790:intron 65.0%
!! GAGAAGACGGGGGCATTGGG+TGG - chr1_3:11189827-11189846 Msa0103790:five_prime_UTR 65.0%
TTTCCAGCCCCCTACCCCGC+GGG - chr1_3:11185351-11185370 Msa0103790:intron 70.0%
GATCATTGCCCCCGCCTCCC+TGG - chr1_3:11188980-11188999 Msa0103790:intron 70.0%
TGAGCTTCCCAGGGAGGCGG+GGG + chr1_3:11188991-11189010 None:intergenic 70.0%
GCCGGTTGAGCTTCCCAGGG+AGG + chr1_3:11188997-11189016 None:intergenic 70.0%
GTCGGCCGGTTGAGCTTCCC+AGG + chr1_3:11189001-11189020 None:intergenic 70.0%
GGCCGACAATGGCAGTCCGG+TGG - chr1_3:11189014-11189033 Msa0103790:intron 70.0%
! ACGCGGGGGAGCACGTACCC+AGG + chr1_3:11181012-11181031 None:intergenic 75.0%
ATTCCCGCGGGGTAGGGGGC+TGG + chr1_3:11185357-11185376 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 11180745 11189986 11180745 ID=Msa0103790;Name=Msa0103790
chr1_3 mRNA 11180745 11189986 11180745 ID=Msa0103790-mRNA-1;Parent=Msa0103790;Name=Msa0103790-mRNA-1;_AED=0.11;_eAED=0.11;_QI=168|1|1|1|1|1|10|408|678
chr1_3 exon 11180745 11181766 11180745 ID=Msa0103790-mRNA-1:exon:4593;Parent=Msa0103790-mRNA-1
chr1_3 exon 11182024 11182520 11182024 ID=Msa0103790-mRNA-1:exon:4592;Parent=Msa0103790-mRNA-1
chr1_3 exon 11183247 11183450 11183247 ID=Msa0103790-mRNA-1:exon:4591;Parent=Msa0103790-mRNA-1
chr1_3 exon 11184309 11184394 11184309 ID=Msa0103790-mRNA-1:exon:4590;Parent=Msa0103790-mRNA-1
chr1_3 exon 11185889 11185970 11185889 ID=Msa0103790-mRNA-1:exon:4589;Parent=Msa0103790-mRNA-1
chr1_3 exon 11186260 11186420 11186260 ID=Msa0103790-mRNA-1:exon:4588;Parent=Msa0103790-mRNA-1
chr1_3 exon 11186619 11186732 11186619 ID=Msa0103790-mRNA-1:exon:4587;Parent=Msa0103790-mRNA-1
chr1_3 exon 11186830 11186928 11186830 ID=Msa0103790-mRNA-1:exon:4586;Parent=Msa0103790-mRNA-1
chr1_3 exon 11188849 11188927 11188849 ID=Msa0103790-mRNA-1:exon:4585;Parent=Msa0103790-mRNA-1
chr1_3 exon 11189718 11189986 11189718 ID=Msa0103790-mRNA-1:exon:4584;Parent=Msa0103790-mRNA-1
chr1_3 five_prime_UTR 11189819 11189986 11189819 ID=Msa0103790-mRNA-1:five_prime_utr;Parent=Msa0103790-mRNA-1
chr1_3 CDS 11189718 11189818 11189718 ID=Msa0103790-mRNA-1:cds;Parent=Msa0103790-mRNA-1
chr1_3 CDS 11188849 11188927 11188849 ID=Msa0103790-mRNA-1:cds;Parent=Msa0103790-mRNA-1
chr1_3 CDS 11186830 11186928 11186830 ID=Msa0103790-mRNA-1:cds;Parent=Msa0103790-mRNA-1
chr1_3 CDS 11186619 11186732 11186619 ID=Msa0103790-mRNA-1:cds;Parent=Msa0103790-mRNA-1
chr1_3 CDS 11186260 11186420 11186260 ID=Msa0103790-mRNA-1:cds;Parent=Msa0103790-mRNA-1
chr1_3 CDS 11185889 11185970 11185889 ID=Msa0103790-mRNA-1:cds;Parent=Msa0103790-mRNA-1
chr1_3 CDS 11184309 11184394 11184309 ID=Msa0103790-mRNA-1:cds;Parent=Msa0103790-mRNA-1
chr1_3 CDS 11183247 11183450 11183247 ID=Msa0103790-mRNA-1:cds;Parent=Msa0103790-mRNA-1
chr1_3 CDS 11182024 11182520 11182024 ID=Msa0103790-mRNA-1:cds;Parent=Msa0103790-mRNA-1
chr1_3 CDS 11181153 11181766 11181153 ID=Msa0103790-mRNA-1:cds;Parent=Msa0103790-mRNA-1
chr1_3 three_prime_UTR 11180745 11181152 11180745 ID=Msa0103790-mRNA-1:three_prime_utr;Parent=Msa0103790-mRNA-1
Gene Sequence

>Msa0103790

ATGGTGAATTCTATGGTTGAACGCGCCACGAGCGATATGCTCATCGGTCCCGATTGGGCTATGAACATCGAGATCTGTGACATGCTCAATCATGATCCTGGGCAAGCAAAGGACGTTGTCAAAGGCATAAAGAAGCGGATTGGAAGTAGAAATTCTAAAGTTCAACTCCTTGCACTAACTTTGCTGGAAACAATCATAAAGAACTGTGGAGATATTGTTCACATGCATGTTGCAGAGAGAGATGTGCTTCATGAGATGGTGAAAATAGTAAAGAAAAAGCCTGATTTTCATGTCAAAGAGAAGATACTGGTTCTTGTAGATACTTGGCAAGAAGCTTTTGGAGGACCGAGGGCAAGATATCCTCAATACTATGCTGCATACCAGGAACTGCTGCGTGCCGGAGCAGTATTCCCTCAGAGATCTGATCAATCTGCACCTGTATTCACTCCTCCACAAACACAACCATTGACTTCATACCCTCCAAACATACGTGATGCGGATGCTCGGCCAGACGCAGCTGAGACCTCTGCAGAGTCTGAATTTCCAACACTAAGTTTGACTGAAATACAGAATGCACATGGTATTATGGATGTTCTTGCGGAAATGCTGAATGCAATAGACCCTAACAACAAAGAAGGGCTTAGACAGGAGGTTATTGTTGATTTGGTGGAGCAGTGTAGAACATACAAGCAAAGAGTGGTACACCTTGTAAACTCAACTACGGATGAATCACTGCTATGCCAGGGACTAGCTCTCAATGATGATCTGCAGCGTCTACTTGCCAGGCATGAATCTATTTTGTCAGGAACTTCTACTCAAAATGGAAATCAGATAGAGGATTCAAAGCCTGCATCTGCTCGGCAACTTGTAGATATTGATGCTCCTTTGGTTGATACTGGAGATACTGGCAAACAAACTGATGGGAGGTCCTCTTCTGGTGCTGAAGCAGGGTCCCAAACATTGAATCAGTTGATGCTTCCTGCGCCAGCTACTTCTAATGGTTCGGCTGTACCTGCCAAAGCTGATCCCAAGTGGGACCTGCTCAGTGGTGATAACTATGACTCACCAAAAGCAGATACTTCACTTGCTCTTGTTCCTCTAGGAGAACAACAACCTGCCACTCCTGTATCTGATCAGAATGCCCTTGTTCTTTTTGATATGCTTTCTAATGGAGACAATGCACCTACGTCTGCCAATACCCAGCCAACCCAGCAACCTAATGTTGGTGGCCAATCTGGTCCATTTACTCCTCAATATCAACAACAACAGCAGCAGACATTCACATCTCAAGGTGGATTTTACCCCAATGGAAATGTGGCAAATGCTGGTTTACCTCAGTATGAGCAATCACTGCATACGCAAAGTACAGCTCCTGCCTGGAATGGTCAGGTTGCTGAACAGCAACAACCAGCTTCCCCTTATGGTGCGCAAAATAGTGGATCATTGCCCCCGCCTCCCTGGGAAGCTCAACCGGCCGACAATGGCAGTCCGGTGGCAGGTGGTCAGTATCCACTACCACCTCAGTATCCACAACCACCTCAATTCAGTCATGTACAGAGTTCCGCAAATCATCAGGGGCCTCAAGCAATGGGTTATGGCCAGGCTGGTGGTATGTACATGCAGCCAAATGCTAACGGCCATATGTCAGCAGTCAATAACCAGGTTGGAAGCAATCAATTGGGCATGCACCCTCAGCATATGCAAGGTGTTGCAGGGCACTACATGGGCATGGCTTCACATCAAGCACAAGGTGGTCCTGCGGCTTCCATGTATCCACAACAGATGTATGGAAACCAATTTGCAGGTTATGGCTACGGTCAACAACAACAACAGGGAGTTCCATACATTGAGCAGCAAATGTATGGCATGTCTGTCAGAGATGATAGTTATTTGCGAAACTCCAGTTCCAATCAGGGTTATACGTCTTATGTTCCATCGGGGAAGCCTTCCAAGCCAGAGGATAAGTTATTCGGGGATCTTGTGGACATGGCAAAAGTGAAGCCGAAAACAACTCCAGGTCGAGCTGGTAGCATGTAA
Protein sequence

>Msa0103790

MVNSMVERATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAERDVLHEMVKIVKKKPDFHVKEKILVLVDTWQEAFGGPRARYPQYYAAYQELLRAGAVFPQRSDQSAPVFTPPQTQPLTSYPPNIRDADARPDAAETSAESEFPTLSLTEIQNAHGIMDVLAEMLNAIDPNNKEGLRQEVIVDLVEQCRTYKQRVVHLVNSTTDESLLCQGLALNDDLQRLLARHESILSGTSTQNGNQIEDSKPASARQLVDIDAPLVDTGDTGKQTDGRSSSGAEAGSQTLNQLMLPAPATSNGSAVPAKADPKWDLLSGDNYDSPKADTSLALVPLGEQQPATPVSDQNALVLFDMLSNGDNAPTSANTQPTQQPNVGGQSGPFTPQYQQQQQQTFTSQGGFYPNGNVANAGLPQYEQSLHTQSTAPAWNGQVAEQQQPASPYGAQNSGSLPPPPWEAQPADNGSPVAGGQYPLPPQYPQPPQFSHVQSSANHQGPQAMGYGQAGGMYMQPNANGHMSAVNNQVGSNQLGMHPQHMQGVAGHYMGMASHQAQGGPAASMYPQQMYGNQFAGYGYGQQQQQGVPYIEQQMYGMSVRDDSYLRNSSSNQGYTSYVPSGKPSKPEDKLFGDLVDMAKVKPKTTPGRAGSM*