Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0427860 | XP_003602689.1 | 88.849 | 278 | 22 | 1 | 1 | 269 | 1 | 278 | 3.04e-176 | 498 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0427860 | sp|O64885|BCCIP_ARATH | 53.957 | 278 | 108 | 6 | 1 | 261 | 1 | 275 | 1.34e-77 | 241 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0427860 | G7J2M5 | 88.849 | 278 | 22 | 1 | 1 | 269 | 1 | 278 | 1.45e-176 | 498 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa0427860 | -0.807349 | 5.279922e-50 | -8.615850e-47 |
| Msa0007850 | Msa0427860 | -0.808132 | 3.599329e-50 | -8.615850e-47 |
| Msa0008200 | Msa0427860 | -0.829089 | 6.255371e-55 | -8.615850e-47 |
| Msa0008840 | Msa0427860 | -0.805954 | 1.040243e-49 | -8.615850e-47 |
| Msa0010490 | Msa0427860 | -0.818655 | 1.749750e-52 | -8.615850e-47 |
| Msa0010500 | Msa0427860 | -0.817731 | 2.832332e-52 | -8.615850e-47 |
| Msa0020390 | Msa0427860 | -0.831674 | 1.460247e-55 | -8.615850e-47 |
| Msa0029260 | Msa0427860 | -0.834996 | 2.169425e-56 | -8.615850e-47 |
| Msa0033880 | Msa0427860 | -0.817609 | 3.017265e-52 | -8.615850e-47 |
| Msa0036540 | Msa0427860 | -0.827899 | 1.212386e-54 | -8.615850e-47 |
| Msa0038870 | Msa0427860 | -0.803270 | 3.776253e-49 | -8.615850e-47 |
| Msa0042280 | Msa0427860 | -0.807895 | 4.042173e-50 | -8.615850e-47 |
| Msa0043860 | Msa0427860 | -0.817827 | 2.694215e-52 | -8.615850e-47 |
| Msa0055100 | Msa0427860 | -0.818529 | 1.869581e-52 | -8.615850e-47 |
| Msa0057610 | Msa0427860 | -0.808724 | 2.691105e-50 | -8.615850e-47 |
| Msa0059950 | Msa0427860 | -0.828333 | 9.528624e-55 | -8.615850e-47 |
| Msa0061970 | Msa0427860 | -0.803523 | 3.346652e-49 | -8.615850e-47 |
| Msa0068020 | Msa0427860 | -0.868956 | 4.439652e-66 | -8.615850e-47 |
| Msa0077010 | Msa0427860 | -0.829792 | 4.221942e-55 | -8.615850e-47 |
| Msa0080730 | Msa0427860 | -0.806521 | 7.900970e-50 | -8.615850e-47 |
| Msa0091610 | Msa0427860 | -0.813962 | 1.962646e-51 | -8.615850e-47 |
| Msa0093010 | Msa0427860 | -0.809804 | 1.578492e-50 | -8.615850e-47 |
| Msa0095360 | Msa0427860 | -0.809439 | 1.891113e-50 | -8.615850e-47 |
| Msa0095770 | Msa0427860 | -0.813500 | 2.480968e-51 | -8.615850e-47 |
| Msa0101180 | Msa0427860 | -0.831373 | 1.732306e-55 | -8.615850e-47 |
| Msa0103790 | Msa0427860 | -0.830985 | 2.157472e-55 | -8.615850e-47 |
| Msa0113240 | Msa0427860 | -0.849979 | 2.284199e-60 | -8.615850e-47 |
| Msa0115370 | Msa0427860 | -0.845894 | 3.054357e-59 | -8.615850e-47 |
| Msa0116380 | Msa0427860 | -0.801569 | 8.465048e-49 | -8.615850e-47 |
| Msa0118540 | Msa0427860 | -0.844130 | 9.148794e-59 | -8.615850e-47 |
| Msa0121820 | Msa0427860 | -0.822589 | 2.184768e-53 | -8.615850e-47 |
| Msa0123510 | Msa0427860 | -0.818961 | 1.491650e-52 | -8.615850e-47 |
| Msa0126840 | Msa0427860 | -0.814420 | 1.554583e-51 | -8.615850e-47 |
| Msa0126880 | Msa0427860 | -0.806687 | 7.287670e-50 | -8.615850e-47 |
| Msa0127040 | Msa0427860 | -0.800727 | 1.258087e-48 | -8.615850e-47 |
| Msa0127850 | Msa0427860 | -0.820618 | 6.236302e-53 | -8.615850e-47 |
| Msa0144430 | Msa0427860 | -0.805665 | 1.196514e-49 | -8.615850e-47 |
| Msa0150260 | Msa0427860 | -0.829342 | 5.430497e-55 | -8.615850e-47 |
| Msa0159420 | Msa0427860 | -0.811021 | 8.622027e-51 | -8.615850e-47 |
| Msa0166750 | Msa0427860 | -0.851091 | 1.112453e-60 | -8.615850e-47 |
| Msa0167480 | Msa0427860 | -0.824957 | 6.090820e-54 | -8.615850e-47 |
| Msa0169300 | Msa0427860 | -0.831767 | 1.385184e-55 | -8.615850e-47 |
| Msa0174000 | Msa0427860 | -0.803812 | 2.915817e-49 | -8.615850e-47 |
| Msa0183460 | Msa0427860 | -0.819872 | 9.242393e-53 | -8.615850e-47 |
| Msa0183850 | Msa0427860 | -0.802923 | 4.456134e-49 | -8.615850e-47 |
| Msa0183870 | Msa0427860 | -0.842118 | 3.142632e-58 | -8.615850e-47 |
| Msa0188350 | Msa0427860 | -0.808259 | 3.381157e-50 | -8.615850e-47 |
| Msa0190120 | Msa0427860 | -0.806256 | 8.983343e-50 | -8.615850e-47 |
| Msa0190590 | Msa0427860 | -0.815343 | 9.703159e-52 | -8.615850e-47 |
| Msa0191080 | Msa0427860 | -0.821075 | 4.896383e-53 | -8.615850e-47 |
| Msa0209080 | Msa0427860 | -0.819396 | 1.187042e-52 | -8.615850e-47 |
| Msa0209500 | Msa0427860 | -0.825140 | 5.514981e-54 | -8.615850e-47 |
| Msa0229360 | Msa0427860 | -0.809229 | 2.098126e-50 | -8.615850e-47 |
| Msa0231100 | Msa0427860 | -0.840495 | 8.402691e-58 | -8.615850e-47 |
| Msa0365860 | Msa0427860 | -0.807623 | 4.617952e-50 | -8.615850e-47 |
| Msa0370160 | Msa0427860 | 0.803018 | 4.257698e-49 | -8.615850e-47 |
| Msa0371500 | Msa0427860 | -0.806861 | 6.696771e-50 | -8.615850e-47 |
| Msa0380100 | Msa0427860 | -0.818930 | 1.515437e-52 | -8.615850e-47 |
| Msa0384880 | Msa0427860 | -0.829026 | 6.479095e-55 | -8.615850e-47 |
| Msa0385490 | Msa0427860 | -0.803565 | 3.280892e-49 | -8.615850e-47 |
| Msa0385500 | Msa0427860 | -0.843239 | 1.583267e-58 | -8.615850e-47 |
| Msa0389510 | Msa0427860 | -0.852659 | 3.993721e-61 | -8.615850e-47 |
| Msa0403770 | Msa0427860 | -0.818972 | 1.482825e-52 | -8.615850e-47 |
| Msa0408240 | Msa0427860 | 0.826133 | 3.206016e-54 | -8.615850e-47 |
| Msa0419720 | Msa0427860 | -0.822099 | 2.839527e-53 | -8.615850e-47 |
| Msa0423750 | Msa0427860 | -0.817745 | 2.811475e-52 | -8.615850e-47 |
| Msa0427860 | Msa0437690 | 0.800891 | 1.164894e-48 | -8.615850e-47 |
| Msa0427860 | Msa0443390 | -0.832706 | 8.109988e-56 | -8.615850e-47 |
| Msa0427860 | Msa0450930 | -0.820220 | 7.695317e-53 | -8.615850e-47 |
| Msa0427860 | Msa0458640 | -0.814495 | 1.496855e-51 | -8.615850e-47 |
| Msa0427860 | Msa0469620 | 0.803469 | 3.434296e-49 | -8.615850e-47 |
| Msa0427860 | Msa0474090 | 0.989690 | 3.228673e-179 | -8.615850e-47 |
| Msa0427860 | Msa0484740 | -0.819961 | 8.823136e-53 | -8.615850e-47 |
| Msa0427860 | Msa0485710 | -0.819642 | 1.043375e-52 | -8.615850e-47 |
| Msa0427860 | Msa0506400 | -0.824492 | 7.839558e-54 | -8.615850e-47 |
| Msa0427860 | Msa0509120 | -0.800556 | 1.363466e-48 | -8.615850e-47 |
| Msa0427860 | Msa0511770 | -0.850452 | 1.682862e-60 | -8.615850e-47 |
| Msa0427860 | Msa0523810 | -0.824430 | 8.104653e-54 | -8.615850e-47 |
| Msa0427860 | Msa0531250 | -0.804168 | 2.458436e-49 | -8.615850e-47 |
| Msa0427860 | Msa0534750 | -0.828078 | 1.097989e-54 | -8.615850e-47 |
| Msa0427860 | Msa0540550 | -0.822441 | 2.365541e-53 | -8.615850e-47 |
| Msa0427860 | Msa0542560 | -0.807989 | 3.859398e-50 | -8.615850e-47 |
| Msa0427860 | Msa0544840 | -0.806925 | 6.490593e-50 | -8.615850e-47 |
| Msa0427860 | Msa0547160 | -0.812966 | 3.249795e-51 | -8.615850e-47 |
| Msa0427860 | Msa0547990 | -0.809316 | 2.010011e-50 | -8.615850e-47 |
| Msa0427860 | Msa0550570 | -0.805290 | 1.433628e-49 | -8.615850e-47 |
| Msa0427860 | Msa0580230 | -0.855345 | 6.714383e-62 | -8.615850e-47 |
| Msa0427860 | Msa0580280 | -0.831281 | 1.824899e-55 | -8.615850e-47 |
| Msa0427860 | Msa0581110 | -0.807798 | 4.238718e-50 | -8.615850e-47 |
| Msa0427860 | Msa0586520 | 0.811687 | 6.179863e-51 | -8.615850e-47 |
| Msa0427860 | Msa0593700 | -0.818423 | 1.975711e-52 | -8.615850e-47 |
| Msa0427860 | Msa0600450 | -0.815741 | 7.912453e-52 | -8.615850e-47 |
| Msa0427860 | Msa0602370 | -0.816542 | 5.240025e-52 | -8.615850e-47 |
| Msa0427860 | Msa0603570 | -0.852951 | 3.295345e-61 | -8.615850e-47 |
| Msa0427860 | Msa0607690 | -0.827733 | 1.329255e-54 | -8.615850e-47 |
| Msa0427860 | Msa0609000 | -0.811622 | 6.385889e-51 | -8.615850e-47 |
| Msa0427860 | Msa0609220 | -0.804830 | 1.789728e-49 | -8.615850e-47 |
| Msa0427860 | Msa0612720 | -0.804565 | 2.032353e-49 | -8.615850e-47 |
| Msa0427860 | Msa0615580 | -0.852062 | 5.907035e-61 | -8.615850e-47 |
| Msa0427860 | Msa0615680 | -0.826864 | 2.146081e-54 | -8.615850e-47 |
| Msa0427860 | Msa0618930 | -0.832906 | 7.233909e-56 | -8.615850e-47 |
| Msa0427860 | Msa0628420 | -0.805589 | 1.241018e-49 | -8.615850e-47 |
| Msa0427860 | Msa0631350 | -0.841244 | 5.344512e-58 | -8.615850e-47 |
| Msa0427860 | Msa0633570 | -0.820059 | 8.378076e-53 | -8.615850e-47 |
| Msa0427860 | Msa0640940 | -0.802602 | 5.191077e-49 | -8.615850e-47 |
| Msa0427860 | Msa0643320 | -0.813632 | 2.320229e-51 | -8.615850e-47 |
| Msa0427860 | Msa0644030 | -0.801324 | 9.499270e-49 | -8.615850e-47 |
| Msa0427860 | Msa0659790 | -0.802281 | 6.043657e-49 | -8.615850e-47 |
| Msa0427860 | Msa0659990 | -0.814622 | 1.402908e-51 | -8.615850e-47 |
| Msa0427860 | Msa0662630 | -0.831281 | 1.825009e-55 | -8.615850e-47 |
| Msa0427860 | Msa0666230 | -0.824512 | 7.753008e-54 | -8.615850e-47 |
| Msa0427860 | Msa0669720 | -0.862316 | 5.525403e-64 | -8.615850e-47 |
| Msa0427860 | Msa0669760 | -0.849096 | 4.027117e-60 | -8.615850e-47 |
| Msa0427860 | Msa0672100 | -0.848002 | 8.085961e-60 | -8.615850e-47 |
| Msa0427860 | Msa0679360 | -0.821944 | 3.083552e-53 | -8.615850e-47 |
| Msa0427860 | Msa0683140 | -0.807899 | 4.034701e-50 | -8.615850e-47 |
| Msa0427860 | Msa0683780 | -0.832012 | 1.204691e-55 | -8.615850e-47 |
| Msa0427860 | Msa0693210 | -0.837898 | 3.961242e-57 | -8.615850e-47 |
| Msa0427860 | Msa0697720 | -0.821082 | 4.878859e-53 | -8.615850e-47 |
| Msa0427860 | Msa0699190 | -0.840967 | 6.318263e-58 | -8.615850e-47 |
| Msa0427860 | Msa0705090 | -0.820570 | 6.396143e-53 | -8.615850e-47 |
| Msa0427860 | Msa0746170 | -0.804981 | 1.664176e-49 | -8.615850e-47 |
| Msa0427860 | Msa0746210 | -0.802182 | 6.333630e-49 | -8.615850e-47 |
| Msa0427860 | Msa0780930 | -0.810560 | 1.084775e-50 | -8.615850e-47 |
| Msa0427860 | Msa0792780 | -0.807277 | 5.468578e-50 | -8.615850e-47 |
| Msa0427860 | Msa0800370 | -0.817512 | 3.173007e-52 | -8.615850e-47 |
| Msa0427860 | Msa0806880 | -0.801828 | 7.488511e-49 | -8.615850e-47 |
| Msa0427860 | Msa0818770 | -0.820126 | 8.088398e-53 | -8.615850e-47 |
| Msa0427860 | Msa0822170 | -0.812490 | 4.130999e-51 | -8.615850e-47 |
| Msa0427860 | Msa0822180 | -0.810599 | 1.063906e-50 | -8.615850e-47 |
| Msa0427860 | Msa0826500 | -0.822656 | 2.108284e-53 | -8.615850e-47 |
| Msa0427860 | Msa0833190 | 0.866231 | 3.317668e-65 | -8.615850e-47 |
| Msa0427860 | Msa0887250 | -0.809633 | 1.718270e-50 | -8.615850e-47 |
| Msa0427860 | Msa0892640 | -0.823497 | 1.341657e-53 | -8.615850e-47 |
| Msa0427860 | Msa0897200 | -0.814814 | 1.271888e-51 | -8.615850e-47 |
| Msa0427860 | Msa0905750 | -0.824789 | 6.671161e-54 | -8.615850e-47 |
| Msa0427860 | Msa0913240 | -0.839043 | 2.006521e-57 | -8.615850e-47 |
| Msa0427860 | Msa0943270 | -0.804595 | 2.003020e-49 | -8.615850e-47 |
| Msa0427860 | Msa0944200 | -0.828928 | 6.843993e-55 | -8.615850e-47 |
| Msa0427860 | Msa0944610 | -0.839282 | 1.739070e-57 | -8.615850e-47 |
| Msa0427860 | Msa0963020 | -0.803549 | 3.306244e-49 | -8.615850e-47 |
| Msa0427860 | Msa0973320 | -0.825291 | 5.079381e-54 | -8.615850e-47 |
| Msa0427860 | Msa0974950 | -0.812420 | 4.277515e-51 | -8.615850e-47 |
| Msa0427860 | Msa0980540 | -0.819012 | 1.451864e-52 | -8.615850e-47 |
| Msa0427860 | Msa1002600 | 0.805254 | 1.458840e-49 | -8.615850e-47 |
| Msa0427860 | Msa1025940 | -0.815432 | 9.274697e-52 | -8.615850e-47 |
| Msa0427860 | Msa1039900 | -0.834038 | 3.776808e-56 | -8.615850e-47 |
| Msa0427860 | Msa1070390 | -0.818715 | 1.696123e-52 | -8.615850e-47 |
| Msa0427860 | Msa1072710 | -0.803477 | 3.421932e-49 | -8.615850e-47 |
| Msa0427860 | Msa1084500 | 0.831515 | 1.598057e-55 | -8.615850e-47 |
| Msa0427860 | Msa1106210 | -0.826142 | 3.190575e-54 | -8.615850e-47 |
| Msa0427860 | Msa1120810 | -0.800535 | 1.377237e-48 | -8.615850e-47 |
| Msa0427860 | Msa1123350 | -0.821980 | 3.026100e-53 | -8.615850e-47 |
| Msa0427860 | Msa1125790 | 0.835263 | 1.857772e-56 | -8.615850e-47 |
| Msa0427860 | Msa1126830 | -0.811613 | 6.414136e-51 | -8.615850e-47 |
| Msa0427860 | Msa1126850 | -0.801524 | 8.644699e-49 | -8.615850e-47 |
| Msa0427860 | Msa1131560 | -0.827293 | 1.694624e-54 | -8.615850e-47 |
| Msa0427860 | Msa1133230 | -0.812604 | 3.899396e-51 | -8.615850e-47 |
| Msa0427860 | Msa1133250 | -0.822075 | 2.875434e-53 | -8.615850e-47 |
| Msa0427860 | Msa1135800 | 0.805041 | 1.616428e-49 | -8.615850e-47 |
| Msa0427860 | Msa1135810 | 0.811715 | 6.094689e-51 | -8.615850e-47 |
| Msa0427860 | Msa1165270 | -0.811065 | 8.434473e-51 | -8.615850e-47 |
| Msa0427860 | Msa1165780 | -0.857003 | 2.194757e-62 | -8.615850e-47 |
| Msa0427860 | Msa1166870 | -0.838307 | 3.108401e-57 | -8.615850e-47 |
| Msa0427860 | Msa1173900 | -0.815493 | 8.989272e-52 | -8.615850e-47 |
| Msa0427860 | Msa1175350 | -0.806233 | 9.088212e-50 | -8.615850e-47 |
| Msa0427860 | Msa1176360 | -0.816193 | 6.272998e-52 | -8.615850e-47 |
| Msa0427860 | Msa1178580 | -0.809853 | 1.540550e-50 | -8.615850e-47 |
| Msa0427860 | Msa1202580 | -0.827064 | 1.922731e-54 | -8.615850e-47 |
| Msa0427860 | Msa1205590 | -0.801716 | 7.895948e-49 | -8.615850e-47 |
| Msa0427860 | Msa1205850 | -0.803967 | 2.707524e-49 | -8.615850e-47 |
| Msa0427860 | Msa1206650 | -0.833844 | 4.223411e-56 | -8.615850e-47 |
| Msa0427860 | Msa1208020 | -0.819195 | 1.319645e-52 | -8.615850e-47 |
| Msa0427860 | Msa1211830 | -0.836660 | 8.216524e-57 | -8.615850e-47 |
| Msa0427860 | Msa1227690 | -0.805750 | 1.147980e-49 | -8.615850e-47 |
| Msa0427860 | Msa1233850 | -0.838055 | 3.608678e-57 | -8.615850e-47 |
| Msa0427860 | Msa1253810 | -0.835626 | 1.503711e-56 | -8.615850e-47 |
| Msa0427860 | Msa1256770 | -0.809212 | 2.115967e-50 | -8.615850e-47 |
| Msa0427860 | Msa1262890 | -0.814070 | 1.857594e-51 | -8.615850e-47 |
| Msa0427860 | Msa1264210 | -0.826755 | 2.278789e-54 | -8.615850e-47 |
| Msa0427860 | Msa1275480 | 0.824859 | 6.424761e-54 | -8.615850e-47 |
| Msa0427860 | Msa1276150 | -0.809899 | 1.506327e-50 | -8.615850e-47 |
| Msa0427860 | Msa1276970 | -0.818680 | 1.727672e-52 | -8.615850e-47 |
| Msa0427860 | Msa1296830 | -0.847001 | 1.523809e-59 | -8.615850e-47 |
| Msa0427860 | Msa1299700 | -0.808966 | 2.388981e-50 | -8.615850e-47 |
| Msa0427860 | Msa1303580 | -0.841130 | 5.727750e-58 | -8.615850e-47 |
| Msa0427860 | Msa1307180 | -0.818080 | 2.361908e-52 | -8.615850e-47 |
| Msa0427860 | Msa1316360 | -0.821298 | 4.348949e-53 | -8.615850e-47 |
| Msa0427860 | Msa1323800 | -0.826455 | 2.687535e-54 | -8.615850e-47 |
| Msa0427860 | Msa1329540 | -0.813648 | 2.301058e-51 | -8.615850e-47 |
| Msa0427860 | Msa1331250 | -0.833874 | 4.150933e-56 | -8.615850e-47 |
| Msa0427860 | Msa1336560 | -0.828135 | 1.064013e-54 | -8.615850e-47 |
| Msa0427860 | Msa1351540 | -0.865133 | 7.367210e-65 | -8.615850e-47 |
| Msa0427860 | Msa1352890 | -0.842808 | 2.061780e-58 | -8.615850e-47 |
| Msa0427860 | Msa1359270 | -0.821169 | 4.656496e-53 | -8.615850e-47 |
| Msa0427860 | Msa1362420 | -0.821482 | 3.944078e-53 | -8.615850e-47 |
| Msa0427860 | Msa1365860 | -0.808984 | 2.366841e-50 | -8.615850e-47 |
| Msa0427860 | Msa1369190 | -0.805566 | 1.254685e-49 | -8.615850e-47 |
| Msa0427860 | Msa1370590 | -0.800444 | 1.437099e-48 | -8.615850e-47 |
| Msa0427860 | Msa1374830 | -0.824233 | 9.020354e-54 | -8.615850e-47 |
| Msa0427860 | Msa1395730 | -0.816495 | 5.370956e-52 | -8.615850e-47 |
| Msa0427860 | Msa1411950 | -0.819430 | 1.166041e-52 | -8.615850e-47 |
| Msa0427860 | Msa1422810 | -0.804145 | 2.486086e-49 | -8.615850e-47 |
| Msa0427860 | Msa1432480 | -0.808966 | 2.388981e-50 | -8.615850e-47 |
| Msa0427860 | Msa1433600 | -0.806801 | 6.896726e-50 | -8.615850e-47 |
| Msa0427860 | Msa1447890 | -0.816153 | 6.403225e-52 | -8.615850e-47 |
| Msa0427860 | Msa1454450 | -0.828776 | 7.449265e-55 | -8.615850e-47 |
| Msa0427860 | Msa1454680 | -0.811744 | 6.006883e-51 | -8.615850e-47 |
| Msa0427860 | Msa1454950 | -0.802138 | 6.467934e-49 | -8.615850e-47 |
| Msa0427860 | Msa1458090 | -0.827155 | 1.829164e-54 | -8.615850e-47 |
| Msa0427860 | Msa1459960 | -0.817274 | 3.590234e-52 | -8.615850e-47 |
| Msa0427860 | Msa1460320 | 0.802110 | 6.552700e-49 | -8.615850e-47 |
| Msa0427860 | Msa1462470 | -0.807654 | 4.547274e-50 | -8.615850e-47 |
| Msa0241830 | Msa0427860 | -0.802887 | 4.531523e-49 | -8.615850e-47 |
| Msa0244970 | Msa0427860 | -0.803124 | 4.048519e-49 | -8.615850e-47 |
| Msa0244980 | Msa0427860 | -0.839021 | 2.032307e-57 | -8.615850e-47 |
| Msa0245060 | Msa0427860 | -0.815045 | 1.130504e-51 | -8.615850e-47 |
| Msa0245580 | Msa0427860 | -0.820017 | 8.563596e-53 | -8.615850e-47 |
| Msa0249580 | Msa0427860 | -0.803036 | 4.222865e-49 | -8.615850e-47 |
| Msa0257490 | Msa0427860 | -0.841112 | 5.789181e-58 | -8.615850e-47 |
| Msa0262480 | Msa0427860 | -0.801954 | 7.055459e-49 | -8.615850e-47 |
| Msa0269470 | Msa0427860 | -0.821270 | 4.413417e-53 | -8.615850e-47 |
| Msa0275360 | Msa0427860 | -0.816327 | 5.854644e-52 | -8.615850e-47 |
| Msa0280430 | Msa0427860 | -0.809068 | 2.271810e-50 | -8.615850e-47 |
| Msa0283420 | Msa0427860 | -0.855248 | 7.165265e-62 | -8.615850e-47 |
| Msa0296250 | Msa0427860 | -0.821175 | 4.643477e-53 | -8.615850e-47 |
| Msa0296790 | Msa0427860 | -0.839526 | 1.503014e-57 | -8.615850e-47 |
| Msa0296920 | Msa0427860 | -0.835244 | 1.878287e-56 | -8.615850e-47 |
| Msa0300350 | Msa0427860 | -0.804343 | 2.260513e-49 | -8.615850e-47 |
| Msa0304590 | Msa0427860 | -0.824257 | 8.904317e-54 | -8.615850e-47 |
| Msa0304660 | Msa0427860 | -0.842596 | 2.348488e-58 | -8.615850e-47 |
| Msa0320590 | Msa0427860 | -0.817969 | 2.502156e-52 | -8.615850e-47 |
| Msa0321690 | Msa0427860 | -0.842402 | 2.643883e-58 | -8.615850e-47 |
| Msa0331700 | Msa0427860 | -0.841291 | 5.195155e-58 | -8.615850e-47 |
| Msa0357900 | Msa0427860 | -0.801336 | 9.448642e-49 | -8.615850e-47 |
| Msa0358770 | Msa0427860 | -0.815372 | 9.560300e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0427860 | MtrunA17_Chr3g0130791 | 88.849 | 278 | 22 | 1 | 1 | 269 | 1 | 278 | 2.80e-180 | 498 |
| Msa0427860 | MtrunA17_Chr3g0116291 | 83.986 | 281 | 33 | 2 | 1 | 269 | 1 | 281 | 2.70e-171 | 476 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0427860 | AT2G44510.1 | 53.957 | 278 | 108 | 6 | 1 | 261 | 1 | 275 | 1.36e-78 | 241 |
| Msa0427860 | AT5G03830.2 | 47.303 | 241 | 82 | 7 | 1 | 232 | 1 | 205 | 1.36e-46 | 157 |
| Msa0427860 | AT5G03830.3 | 47.303 | 241 | 82 | 7 | 1 | 232 | 1 | 205 | 1.36e-46 | 157 |
| Msa0427860 | AT5G03830.1 | 47.303 | 241 | 82 | 7 | 1 | 232 | 1 | 205 | 1.36e-46 | 157 |
Find 120 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTCTTGGCCTGCTTTA+AGG | 0.079662 | 3_2:-78544187 | None:intergenic |
| CGGCAGCGGCGCAACCTATT+TGG | 0.161136 | 3_2:+78542240 | Msa0427860:five_prime_UTR |
| TTGTTACCGCTCTTAATTTA+TGG | 0.174434 | 3_2:+78543507 | Msa0427860:CDS |
| TGGCTTTGCAGACTTGATTT+TGG | 0.241139 | 3_2:+78543421 | Msa0427860:CDS |
| GTGTTTGAGATGCCAAAATT+TGG | 0.243849 | 3_2:+78546048 | Msa0427860:three_prime_UTR |
| TGATAAGTTGATATTACTTT+TGG | 0.246157 | 3_2:+78544217 | Msa0427860:CDS |
| AATATGTTGCCGAATACTTC+TGG | 0.249807 | 3_2:-78542180 | None:intergenic |
| TTGGGTCGTTGACGCCTTCT+TGG | 0.252549 | 3_2:-78542920 | None:intergenic |
| TAGCTTCCGCTGCCTCTTTC+CGG | 0.267528 | 3_2:+78542220 | Msa0427860:five_prime_UTR |
| AGAGTGTTAAATTGCCAAAT+AGG | 0.279027 | 3_2:-78542254 | None:intergenic |
| GAATATAATGGGCCAAGATT+TGG | 0.291911 | 3_2:-78542939 | None:intergenic |
| CCATGGAAATCATTGGGTTT+AGG | 0.305918 | 3_2:-78543347 | None:intergenic |
| GCCAAATGGGGAGAATATAA+TGG | 0.310615 | 3_2:-78542951 | None:intergenic |
| CTCTTAATTTATGGAGGTAT+AGG | 0.323978 | 3_2:+78543516 | Msa0427860:CDS |
| CGAGCAAGAGCGCGGCCAAA+TGG | 0.341638 | 3_2:-78542965 | None:intergenic |
| CCCATTATATTCTCCCCATT+TGG | 0.342026 | 3_2:+78542950 | Msa0427860:CDS |
| AATATAATGGGCCAAGATTT+GGG | 0.346246 | 3_2:-78542938 | None:intergenic |
| AGCACACCACGTAGGTCTTC+TGG | 0.360860 | 3_2:+78544247 | Msa0427860:CDS |
| CTTAACTCCATGGAAATCAT+TGG | 0.376136 | 3_2:-78543354 | None:intergenic |
| TCTTAATTTATGGAGGTATA+GGG | 0.378376 | 3_2:+78543517 | Msa0427860:CDS |
| TGTTTGAGATGCCAAAATTT+GGG | 0.380626 | 3_2:+78546049 | Msa0427860:three_prime_UTR |
| TCAGATGACTCTGACCCTTC+AGG | 0.384150 | 3_2:-78543204 | None:intergenic |
| GAATTATATAATGCTTAAAC+TGG | 0.392923 | 3_2:-78544501 | None:intergenic |
| GAGCAAGAGCGCGGCCAAAT+GGG | 0.392951 | 3_2:-78542964 | None:intergenic |
| TTAACTTCTTTAATAAATGA+AGG | 0.410212 | 3_2:+78545925 | Msa0427860:three_prime_UTR |
| AAAGAGGCAGCGGAAGCTAT+TGG | 0.413377 | 3_2:-78542216 | None:intergenic |
| AAGAGATAGAGAATATGAAT+TGG | 0.414653 | 3_2:+78546233 | Msa0427860:three_prime_UTR |
| ATGACGGTTTGGCTTAGAAA+TGG | 0.416643 | 3_2:-78542996 | None:intergenic |
| CAGTTCAATGGGATTGATCA+TGG | 0.417979 | 3_2:+78545864 | Msa0427860:CDS |
| ATGGATTCGTAATGACGGTT+TGG | 0.422019 | 3_2:-78543007 | None:intergenic |
| GTTAATTGTTGACGAAATGT+TGG | 0.426568 | 3_2:-78545907 | None:intergenic |
| CATAAAGATGTGGTAAAAGC+TGG | 0.429728 | 3_2:-78544298 | None:intergenic |
| GGCGTCAACGACCCAAATCT+TGG | 0.432825 | 3_2:+78542927 | Msa0427860:CDS |
| AAACACACCCCAGAAGTATT+CGG | 0.436981 | 3_2:+78542171 | Msa0427860:five_prime_UTR |
| TTAACTCCATGGAAATCATT+GGG | 0.437074 | 3_2:-78543353 | None:intergenic |
| TTACCTAGATGTTGAAGAAT+GGG | 0.437722 | 3_2:+78543391 | Msa0427860:CDS |
| GCTGAAGAATTACAGTTCAA+TGG | 0.439537 | 3_2:+78545852 | Msa0427860:intron |
| CTGAAGAATTACAGTTCAAT+GGG | 0.441005 | 3_2:+78545853 | Msa0427860:CDS |
| AATCCCATTCTTCAACATCT+AGG | 0.445601 | 3_2:-78543394 | None:intergenic |
| TGGCCGCGCTCTTGCTCGTA+TGG | 0.446929 | 3_2:+78542970 | Msa0427860:CDS |
| ATATGTTGCCGAATACTTCT+GGG | 0.449452 | 3_2:-78542179 | None:intergenic |
| CTTACCTAGATGTTGAAGAA+TGG | 0.457923 | 3_2:+78543390 | Msa0427860:CDS |
| CCGCTGCCTCTTTCCGGCAG+CGG | 0.461632 | 3_2:+78542226 | Msa0427860:five_prime_UTR |
| TGACGCCTTCTTGGCTTTCG+AGG | 0.467184 | 3_2:-78542911 | None:intergenic |
| CCAAATGGGGAGAATATAAT+GGG | 0.469210 | 3_2:-78542950 | None:intergenic |
| TATCAGCAATGCCCTTCTCT+TGG | 0.475701 | 3_2:-78544199 | None:intergenic |
| CAAATAGGTTGCGCCGCTGC+CGG | 0.476002 | 3_2:-78542239 | None:intergenic |
| CATCTAGGTAAGTTTGCAGC+AGG | 0.476506 | 3_2:-78543379 | None:intergenic |
| CGTCTTACTAGTAGAGGAAA+GGG | 0.484380 | 3_2:-78543041 | None:intergenic |
| GCTTAAACTGGAAGGAAGTC+CGG | 0.491473 | 3_2:-78544489 | None:intergenic |
| ACATTCACTCTCCATTTCAC+TGG | 0.495073 | 3_2:-78546286 | None:intergenic |
| ATTATCATTGCAAAATAGAA+AGG | 0.496366 | 3_2:-78546094 | None:intergenic |
| AATTCTTAGCAAAATTTACA+AGG | 0.497613 | 3_2:+78544519 | Msa0427860:CDS |
| TGGCTTCAACAAGCACACTT+TGG | 0.512805 | 3_2:+78543173 | Msa0427860:CDS |
| ATAAAGATGTGGTAAAAGCT+GGG | 0.518331 | 3_2:-78544297 | None:intergenic |
| GTTGCGCCGCTGCCGGAAAG+AGG | 0.520269 | 3_2:-78542232 | None:intergenic |
| GTGGTAAAAGCTGGGGAGGA+AGG | 0.522221 | 3_2:-78544289 | None:intergenic |
| AACAGCCAACAGAGGACCTC+CGG | 0.530393 | 3_2:+78544470 | Msa0427860:intron |
| CCGCTGCCGGAAAGAGGCAG+CGG | 0.531897 | 3_2:-78542226 | None:intergenic |
| GAATTTCTCCTCCTTAAAGC+AGG | 0.534707 | 3_2:+78544176 | Msa0427860:CDS |
| CCTAAACCCAATGATTTCCA+TGG | 0.540138 | 3_2:+78543347 | Msa0427860:CDS |
| GAGGTCGAAGTGAACGATGA+AGG | 0.541679 | 3_2:-78542306 | None:intergenic |
| TTACTAGTAGAGGAAAGGGT+AGG | 0.545836 | 3_2:-78543037 | None:intergenic |
| TCTGTGGTGTTCAGCGCTCA+CGG | 0.548779 | 3_2:+78542274 | Msa0427860:five_prime_UTR |
| GCGTCTTACTAGTAGAGGAA+AGG | 0.553247 | 3_2:-78543042 | None:intergenic |
| TCTCTTGGCCTGCTTTAAGG+AGG | 0.553910 | 3_2:-78544184 | None:intergenic |
| CTTTAATAAATGAAGGCTGA+AGG | 0.554231 | 3_2:+78545932 | Msa0427860:three_prime_UTR |
| CACTGTAGGGACTGTTGTGA+AGG | 0.561683 | 3_2:+78543451 | Msa0427860:CDS |
| GTAGAGGATGATGAGGACGA+AGG | 0.562570 | 3_2:+78543473 | Msa0427860:CDS |
| TATATAATGCTTAAACTGGA+AGG | 0.563473 | 3_2:-78544497 | None:intergenic |
| AAGGGTCAGAGTCATCTGAC+GGG | 0.567670 | 3_2:+78543208 | Msa0427860:CDS |
| AGATGTGGTAAAAGCTGGGG+AGG | 0.569543 | 3_2:-78544293 | None:intergenic |
| AAATGCCTCGAAAGCCAAGA+AGG | 0.571167 | 3_2:+78542906 | Msa0427860:exon |
| AAAAGGCGTCTTACTAGTAG+AGG | 0.571577 | 3_2:-78543047 | None:intergenic |
| CCTTAAAGCAGGCCAAGAGA+AGG | 0.574068 | 3_2:+78544187 | Msa0427860:CDS |
| GCAGCAGGGTCTTAACTCCA+TGG | 0.576405 | 3_2:-78543364 | None:intergenic |
| AGCAAGAGCGCGGCCAAATG+GGG | 0.577789 | 3_2:-78542963 | None:intergenic |
| CTTAAAGCAGGCCAAGAGAA+GGG | 0.581387 | 3_2:+78544188 | Msa0427860:CDS |
| TTACCGCTCTTAATTTATGG+AGG | 0.583198 | 3_2:+78543510 | Msa0427860:CDS |
| ACTTAGTACGTCCTCACCGC+AGG | 0.584902 | 3_2:+78542341 | Msa0427860:five_prime_UTR |
| TACTAGTAGAGGAAAGGGTA+GGG | 0.587803 | 3_2:-78543036 | None:intergenic |
| GAAGTCCGGAGGTCCTCTGT+TGG | 0.590024 | 3_2:-78544475 | None:intergenic |
| TTTGGCAATTTAACACTCTG+TGG | 0.591459 | 3_2:+78542258 | Msa0427860:five_prime_UTR |
| GTCGAAGTGAACGATGAAGG+TGG | 0.595763 | 3_2:-78542303 | None:intergenic |
| GAAGGGTCAGAGTCATCTGA+CGG | 0.599996 | 3_2:+78543207 | Msa0427860:CDS |
| GTCATGGGCCACAGAAGATG+AGG | 0.600540 | 3_2:+78544340 | Msa0427860:CDS |
| ACTGAGCGATGATAGTGAAG+AGG | 0.609208 | 3_2:+78544714 | Msa0427860:CDS |
| AAAAGAGAATCATAAAGATG+TGG | 0.615325 | 3_2:-78544308 | None:intergenic |
| CGGAAGCTATTGGAAGTACA+CGG | 0.616719 | 3_2:-78542206 | None:intergenic |
| TCGAAGTGAACGATGAAGGT+GGG | 0.619580 | 3_2:-78542302 | None:intergenic |
| ACATCTCACCTCATCTTCTG+TGG | 0.620207 | 3_2:-78544348 | None:intergenic |
| TCGCAATGGATTCGTAATGA+CGG | 0.622074 | 3_2:-78543012 | None:intergenic |
| GAAGGCTGAAGGCAACCAGA+AGG | 0.624926 | 3_2:+78545943 | Msa0427860:three_prime_UTR |
| ACTTTGGAAGAAAGACCTGA+AGG | 0.627107 | 3_2:+78543189 | Msa0427860:CDS |
| GGGATTGATCATGGATGTTG+AGG | 0.628988 | 3_2:+78545873 | Msa0427860:CDS |
| AAGTGAACGATGAAGGTGGG+TGG | 0.639561 | 3_2:-78542299 | None:intergenic |
| TCTTCTGGTATCACAGCGTG+TGG | 0.641776 | 3_2:+78544262 | Msa0427860:CDS |
| GGAAAGGGTAGGGTTCGCAA+TGG | 0.644789 | 3_2:-78543026 | None:intergenic |
| ATGCCATACGAGCAAGAGCG+CGG | 0.646129 | 3_2:-78542973 | None:intergenic |
| TAAAGATGTGGTAAAAGCTG+GGG | 0.646135 | 3_2:-78544296 | None:intergenic |
| AGGGACTGTTGTGAAGGTAG+AGG | 0.647189 | 3_2:+78543457 | Msa0427860:CDS |
| CGTACTAAGTGTGAGGCGAA+CGG | 0.647865 | 3_2:-78542328 | None:intergenic |
| CTTTGGAAGAAAGACCTGAA+GGG | 0.652042 | 3_2:+78543190 | Msa0427860:CDS |
| ATCTAGGTAAGTTTGCAGCA+GGG | 0.655089 | 3_2:-78543378 | None:intergenic |
| GTTGAAGAATGGGATTTGAG+TGG | 0.660162 | 3_2:+78543401 | Msa0427860:CDS |
| AAAAGTGTACAAACTAACAA+CGG | 0.665640 | 3_2:-78546145 | None:intergenic |
| GTGAGGACGTACTAAGTGTG+AGG | 0.668125 | 3_2:-78542335 | None:intergenic |
| TATGTTGCCGAATACTTCTG+GGG | 0.673877 | 3_2:-78542178 | None:intergenic |
| AATAGTATATGTTAAGCCCG+AGG | 0.680431 | 3_2:+78544738 | Msa0427860:CDS |
| GCACACTTAACAGCCAACAG+AGG | 0.683392 | 3_2:+78544462 | Msa0427860:intron |
| ACTAAGTGTGAGGCGAACGG+AGG | 0.694204 | 3_2:-78542325 | None:intergenic |
| ATACCTCCATAAATTAAGAG+CGG | 0.696195 | 3_2:-78543513 | None:intergenic |
| TGTGAAGGTAGAGGATGATG+AGG | 0.709733 | 3_2:+78543466 | Msa0427860:CDS |
| AGGGTCAGAGTCATCTGACG+GGG | 0.709794 | 3_2:+78543209 | Msa0427860:CDS |
| GAAAGGAAATACCTGCGGTG+AGG | 0.711295 | 3_2:-78542352 | None:intergenic |
| AGTGTACAAACTAACAACGG+AGG | 0.712430 | 3_2:-78546142 | None:intergenic |
| CTTCACAACAGTCCCTACAG+TGG | 0.715752 | 3_2:-78543450 | None:intergenic |
| TAAACTGGAAGGAAGTCCGG+AGG | 0.716607 | 3_2:-78544486 | None:intergenic |
| GGGGAACAAGCACACCACGT+AGG | 0.744491 | 3_2:+78544239 | Msa0427860:CDS |
| GTGATACCAGAAGACCTACG+TGG | 0.802514 | 3_2:-78544253 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTTTCTTAAATTACTA+CGG | - | chr3_2:78542567-78542586 | None:intergenic | 10.0% |
| !!! | GTTTTTTTTTTTATTGATTA+CGG | - | chr3_2:78542869-78542888 | None:intergenic | 10.0% |
| !! | TTAAATTATAAAAGAGAAAA+AGG | - | chr3_2:78543067-78543086 | None:intergenic | 10.0% |
| !!! | TTATTTTTTATTTGTAAGTT+TGG | + | chr3_2:78544056-78544075 | Msa0427860:intron | 10.0% |
| !!! | TTTAAAATTATTAATCTAGA+AGG | + | chr3_2:78545731-78545750 | Msa0427860:intron | 10.0% |
| !! | TTCATATTCAAGAAAAAAAA+AGG | + | chr3_2:78543771-78543790 | Msa0427860:intron | 15.0% |
| !!! | ATTTTTTTCTTTAATGTCTT+TGG | + | chr3_2:78543850-78543869 | Msa0427860:intron | 15.0% |
| !! | TAAGTTATCTACAATTTATA+AGG | + | chr3_2:78544033-78544052 | Msa0427860:intron | 15.0% |
| !! | TCTCAAATAAAATATGTATT+TGG | - | chr3_2:78544084-78544103 | None:intergenic | 15.0% |
| !!! | ATTGTTATTTTTAGCTTTTA+TGG | + | chr3_2:78544588-78544607 | Msa0427860:intron | 15.0% |
| !! | ACTAAAATTAAGCAAATTAA+CGG | - | chr3_2:78545577-78545596 | None:intergenic | 15.0% |
| !! | ATCAATTATTCTGAATTATA+CGG | + | chr3_2:78545814-78545833 | Msa0427860:intron | 15.0% |
| !! | TTAACTTCTTTAATAAATGA+AGG | + | chr3_2:78545925-78545944 | Msa0427860:three_prime_UTR | 15.0% |
| !!! | ATTTTAAAAATCCCAAATTT+TGG | - | chr3_2:78546063-78546082 | None:intergenic | 15.0% |
| !! | TCTTATGATCAAACTAATTA+GGG | - | chr3_2:78542536-78542555 | None:intergenic | 20.0% |
| !! | TTCTTATGATCAAACTAATT+AGG | - | chr3_2:78542537-78542556 | None:intergenic | 20.0% |
| !! | TGTAAGACATAAAACATAAA+AGG | - | chr3_2:78543117-78543136 | None:intergenic | 20.0% |
| !! | AAGTAAAATTGATTGATACA+AGG | + | chr3_2:78543276-78543295 | Msa0427860:intron | 20.0% |
| !! | TATTACATTAGAAAAGAAAG+AGG | - | chr3_2:78543589-78543608 | None:intergenic | 20.0% |
| !!! | TACACATATGATTACTATTT+TGG | - | chr3_2:78543749-78543768 | None:intergenic | 20.0% |
| !! | AAGGAATTTGTATATTTGTA+TGG | + | chr3_2:78543790-78543809 | Msa0427860:intron | 20.0% |
| !! | AGGAATTTGTATATTTGTAT+GGG | + | chr3_2:78543791-78543810 | Msa0427860:intron | 20.0% |
| !!! | TGATAAGTTGATATTACTTT+TGG | + | chr3_2:78544217-78544236 | Msa0427860:CDS | 20.0% |
| !!! | GATAAGTTGATATTACTTTT+GGG | + | chr3_2:78544218-78544237 | Msa0427860:CDS | 20.0% |
| !!! | ATAAGTTGATATTACTTTTG+GGG | + | chr3_2:78544219-78544238 | Msa0427860:CDS | 20.0% |
| !! | GAATTATATAATGCTTAAAC+TGG | - | chr3_2:78544504-78544523 | None:intergenic | 20.0% |
| !! | AATTCTTAGCAAAATTTACA+AGG | + | chr3_2:78544519-78544538 | Msa0427860:CDS | 20.0% |
| !! | ATAAGAGAACAACAATAAAT+AGG | - | chr3_2:78544570-78544589 | None:intergenic | 20.0% |
| !! | ATGTTACAAAACAACAAAAA+TGG | - | chr3_2:78544635-78544654 | None:intergenic | 20.0% |
| !! | GACAAAATAATTCAAAATGA+TGG | - | chr3_2:78544799-78544818 | None:intergenic | 20.0% |
| !!! | TGTAATAAGAGAAGTTTTAT+AGG | + | chr3_2:78545183-78545202 | Msa0427860:intron | 20.0% |
| !! | AAAAATAAAACTCTATTCAG+TGG | - | chr3_2:78545481-78545500 | None:intergenic | 20.0% |
| !!! | AGTTTTATTTTTAGTACCAT+GGG | + | chr3_2:78545489-78545508 | Msa0427860:intron | 20.0% |
| !! | CTAAAATTAAGCAAATTAAC+GGG | - | chr3_2:78545576-78545595 | None:intergenic | 20.0% |
| !!! | GGATTTTTAAAATTAAACTC+TGG | + | chr3_2:78546070-78546089 | Msa0427860:three_prime_UTR | 20.0% |
| !! | ATTATCATTGCAAAATAGAA+AGG | - | chr3_2:78546097-78546116 | None:intergenic | 20.0% |
| !!! | TTCTATTTTGCAATGATAAT+TGG | + | chr3_2:78546097-78546116 | Msa0427860:three_prime_UTR | 20.0% |
| !!! | TTTTATGCTTTTTACCATGA+AGG | + | chr3_2:78542380-78542399 | Msa0427860:intron | 25.0% |
| ! | GACAGTACAAATATAATCAA+TGG | - | chr3_2:78542681-78542700 | None:intergenic | 25.0% |
| ! | AGCTGAAAATGCAAAATAAT+AGG | - | chr3_2:78542787-78542806 | None:intergenic | 25.0% |
| !! | TCTTAATTTATGGAGGTATA+GGG | + | chr3_2:78543517-78543536 | Msa0427860:CDS | 25.0% |
| !!! | ATATGATTACTATTTTGGTG+GGG | - | chr3_2:78543744-78543763 | None:intergenic | 25.0% |
| !!! | CATATGATTACTATTTTGGT+GGG | - | chr3_2:78543745-78543764 | None:intergenic | 25.0% |
| !!! | ACATATGATTACTATTTTGG+TGG | - | chr3_2:78543746-78543765 | None:intergenic | 25.0% |
| ! | GAATAAGAATGAATTGATCA+AGG | - | chr3_2:78543822-78543841 | None:intergenic | 25.0% |
| !! | CAAAATTTTCAAATTGTTGC+TGG | - | chr3_2:78543891-78543910 | None:intergenic | 25.0% |
| !!! | TTGAAAATTTTGTTTGTGAC+TGG | + | chr3_2:78543899-78543918 | Msa0427860:intron | 25.0% |
| !! | AAAGCTTCTAAAAAAGTTGA+CGG | - | chr3_2:78544002-78544021 | None:intergenic | 25.0% |
| !!! | TAAGTTGATATTACTTTTGG+GGG | + | chr3_2:78544220-78544239 | Msa0427860:CDS | 25.0% |
| ! | AAAAGAGAATCATAAAGATG+TGG | - | chr3_2:78544311-78544330 | None:intergenic | 25.0% |
| !!! | TCTTTTTAATGAAGTGTCAT+GGG | + | chr3_2:78544325-78544344 | Msa0427860:CDS | 25.0% |
| ! | TATATAATGCTTAAACTGGA+AGG | - | chr3_2:78544500-78544519 | None:intergenic | 25.0% |
| !! | GTAACATTTTACTTCATTTC+TGG | + | chr3_2:78544648-78544667 | Msa0427860:intron | 25.0% |
| !! | AGCTTAACTGGAAATTATTT+TGG | - | chr3_2:78544841-78544860 | None:intergenic | 25.0% |
| !!! | CTCTTTTTTGGTTTAATTGA+TGG | + | chr3_2:78544919-78544938 | Msa0427860:intron | 25.0% |
| ! | GTTAACCATGCAATATTTAT+AGG | + | chr3_2:78545205-78545224 | Msa0427860:intron | 25.0% |
| !!! | GAGTTTTATTTTTAGTACCA+TGG | + | chr3_2:78545488-78545507 | Msa0427860:intron | 25.0% |
| ! | TTTAACCTACAAAAAGAGAT+AGG | + | chr3_2:78545693-78545712 | Msa0427860:intron | 25.0% |
| !! | ATATTATCCGATTTGTAGAA+TGG | + | chr3_2:78545774-78545793 | Msa0427860:intron | 25.0% |
| !! | TATTATCCGATTTGTAGAAT+GGG | + | chr3_2:78545775-78545794 | Msa0427860:intron | 25.0% |
| ! | TTTATGTTAATGAATTGTCC+AGG | - | chr3_2:78545976-78545995 | None:intergenic | 25.0% |
| !!! | TGATTTAATTTTTTTCCTGC+AGG | + | chr3_2:78546026-78546045 | Msa0427860:intron | 25.0% |
| !! | AAAAGTGTACAAACTAACAA+CGG | - | chr3_2:78546148-78546167 | None:intergenic | 25.0% |
| ! | AAGAGATAGAGAATATGAAT+TGG | + | chr3_2:78546233-78546252 | Msa0427860:three_prime_UTR | 25.0% |
| ! | AGAGTGTTAAATTGCCAAAT+AGG | - | chr3_2:78542257-78542276 | None:intergenic | 30.0% |
| ! | AAAAGCATAAAACAGAGGAA+AGG | - | chr3_2:78542372-78542391 | None:intergenic | 30.0% |
| ! | TGGTAAAAAGCATAAAACAG+AGG | - | chr3_2:78542377-78542396 | None:intergenic | 30.0% |
| ! | CTTTTTACCATGAAGGTTTA+CGG | + | chr3_2:78542387-78542406 | Msa0427860:intron | 30.0% |
| TAGAATCAGTTATGCTACTA+TGG | - | chr3_2:78542446-78542465 | None:intergenic | 30.0% | |
| TTAGGGAGGAAATAAACTTT+AGG | - | chr3_2:78542519-78542538 | None:intergenic | 30.0% | |
| TATGATCAAACTAATTAGGG+AGG | - | chr3_2:78542533-78542552 | None:intergenic | 30.0% | |
| ATGGACACATTTCAAAATTG+TGG | - | chr3_2:78542662-78542681 | None:intergenic | 30.0% | |
| CATTTCGAAAACACTGAAAA+TGG | - | chr3_2:78542891-78542910 | None:intergenic | 30.0% | |
| !! | AATATAATGGGCCAAGATTT+GGG | - | chr3_2:78542941-78542960 | None:intergenic | 30.0% |
| !! | ATAAAAGGCACTTAAAAGCA+TGG | - | chr3_2:78543102-78543121 | None:intergenic | 30.0% |
| ! | ATTGGGTTTAGGATCAAAAA+AGG | - | chr3_2:78543339-78543358 | None:intergenic | 30.0% |
| TTAACTCCATGGAAATCATT+GGG | - | chr3_2:78543356-78543375 | None:intergenic | 30.0% | |
| TTACCTAGATGTTGAAGAAT+GGG | + | chr3_2:78543391-78543410 | Msa0427860:CDS | 30.0% | |
| TTGTTACCGCTCTTAATTTA+TGG | + | chr3_2:78543507-78543526 | Msa0427860:CDS | 30.0% | |
| ATACCTCCATAAATTAAGAG+CGG | - | chr3_2:78543516-78543535 | None:intergenic | 30.0% | |
| ! | CTCTTAATTTATGGAGGTAT+AGG | + | chr3_2:78543516-78543535 | Msa0427860:CDS | 30.0% |
| AGAAAGTAAGTGTGATCTTA+AGG | - | chr3_2:78543638-78543657 | None:intergenic | 30.0% | |
| TCACACTTACTTTCTTCTTT+AGG | + | chr3_2:78543643-78543662 | Msa0427860:intron | 30.0% | |
| GGTAGATGTTAATTCAACTT+AGG | - | chr3_2:78543980-78543999 | None:intergenic | 30.0% | |
| ! | AAGCTTCTAAAAAAGTTGAC+GGG | - | chr3_2:78544001-78544020 | None:intergenic | 30.0% |
| !! | CTCAAATTAGATTAGCTTCA+AGG | - | chr3_2:78544111-78544130 | None:intergenic | 30.0% |
| !!! | TGAGCCTTTAAAATTTTGCT+AGG | + | chr3_2:78544127-78544146 | Msa0427860:intron | 30.0% |
| ! | TGCTCCTAGCAAAATTTTAA+AGG | - | chr3_2:78544134-78544153 | None:intergenic | 30.0% |
| ! | TAAAATTTTGCTAGGAGCAA+AGG | + | chr3_2:78544135-78544154 | Msa0427860:intron | 30.0% |
| AAGGTGTATTATGAAACTCA+AGG | + | chr3_2:78544154-78544173 | Msa0427860:intron | 30.0% | |
| ATAAAGATGTGGTAAAAGCT+GGG | - | chr3_2:78544300-78544319 | None:intergenic | 30.0% | |
| !! | CTCTTTTTAATGAAGTGTCA+TGG | + | chr3_2:78544324-78544343 | Msa0427860:CDS | 30.0% |
| !! | AGATGTTGATAGTATCAGAT+GGG | + | chr3_2:78544365-78544384 | Msa0427860:intron | 30.0% |
| GAGAACAACAATAAATAGGA+AGG | - | chr3_2:78544566-78544585 | None:intergenic | 30.0% | |
| TTGTGAAAAAAGTTCATCCT+CGG | - | chr3_2:78544758-78544777 | None:intergenic | 30.0% | |
| ACAGACCTATAAATATTGCA+TGG | - | chr3_2:78545213-78545232 | None:intergenic | 30.0% | |
| AATAAAACTCTATTCAGTGG+CGG | - | chr3_2:78545478-78545497 | None:intergenic | 30.0% | |
| TGAAAGAGTCTGTTACATTA+AGG | + | chr3_2:78545611-78545630 | Msa0427860:intron | 30.0% | |
| TAAGGATTAGATATGAACTC+TGG | + | chr3_2:78545629-78545648 | Msa0427860:intron | 30.0% | |
| ! | TCTTTTTGTAGGTTAAAGCA+CGG | - | chr3_2:78545690-78545709 | None:intergenic | 30.0% |
| ! | CTATTCCTATCTCTTTTTGT+AGG | - | chr3_2:78545701-78545720 | None:intergenic | 30.0% |
| CTACAAAAAGAGATAGGAAT+AGG | + | chr3_2:78545699-78545718 | Msa0427860:intron | 30.0% | |
| ! | ATTATCCGATTTGTAGAATG+GGG | + | chr3_2:78545776-78545795 | Msa0427860:intron | 30.0% |
| CTGAAGAATTACAGTTCAAT+GGG | + | chr3_2:78545853-78545872 | Msa0427860:CDS | 30.0% | |
| GTTAATTGTTGACGAAATGT+TGG | - | chr3_2:78545910-78545929 | None:intergenic | 30.0% | |
| CTTTAATAAATGAAGGCTGA+AGG | + | chr3_2:78545932-78545951 | Msa0427860:three_prime_UTR | 30.0% | |
| ! | TGTTTGAGATGCCAAAATTT+GGG | + | chr3_2:78546049-78546068 | Msa0427860:three_prime_UTR | 30.0% |
| !!! | TGTTAGTTTGTACACTTTTC+TGG | + | chr3_2:78546149-78546168 | Msa0427860:three_prime_UTR | 30.0% |
| !!! | GTTAGTTTGTACACTTTTCT+GGG | + | chr3_2:78546150-78546169 | Msa0427860:three_prime_UTR | 30.0% |
| ! | TTTCTGGGTTTCTCAATTTT+TGG | + | chr3_2:78546165-78546184 | Msa0427860:three_prime_UTR | 30.0% |
| TGAAAAAGTTTCCAGTGAAA+TGG | + | chr3_2:78546275-78546294 | Msa0427860:three_prime_UTR | 30.0% | |
| ATATGTTGCCGAATACTTCT+GGG | - | chr3_2:78542182-78542201 | None:intergenic | 35.0% | |
| AATATGTTGCCGAATACTTC+TGG | - | chr3_2:78542183-78542202 | None:intergenic | 35.0% | |
| TTTGGCAATTTAACACTCTG+TGG | + | chr3_2:78542258-78542277 | Msa0427860:five_prime_UTR | 35.0% | |
| ! | ACTTTAGGTATCGCGAATTA+AGG | - | chr3_2:78542504-78542523 | None:intergenic | 35.0% |
| !! | GAATATAATGGGCCAAGATT+TGG | - | chr3_2:78542942-78542961 | None:intergenic | 35.0% |
| CCAAATGGGGAGAATATAAT+GGG | - | chr3_2:78542953-78542972 | None:intergenic | 35.0% | |
| CAAAAAAGGCAAAATCAGCT+TGG | - | chr3_2:78543325-78543344 | None:intergenic | 35.0% | |
| CTTAACTCCATGGAAATCAT+TGG | - | chr3_2:78543357-78543376 | None:intergenic | 35.0% | |
| CTTACCTAGATGTTGAAGAA+TGG | + | chr3_2:78543390-78543409 | Msa0427860:CDS | 35.0% | |
| AATCCCATTCTTCAACATCT+AGG | - | chr3_2:78543397-78543416 | None:intergenic | 35.0% | |
| TTACCGCTCTTAATTTATGG+AGG | + | chr3_2:78543510-78543529 | Msa0427860:CDS | 35.0% | |
| TCACTAGTAAACTTGCACAA+GGG | - | chr3_2:78543700-78543719 | None:intergenic | 35.0% | |
| ! | GTCTTTGGTTCATTGAATAG+TGG | + | chr3_2:78543865-78543884 | Msa0427860:intron | 35.0% |
| GATGTTAATTCAACTTAGGC+AGG | - | chr3_2:78543976-78543995 | None:intergenic | 35.0% | |
| TAAAGATGTGGTAAAAGCTG+GGG | - | chr3_2:78544299-78544318 | None:intergenic | 35.0% | |
| CATAAAGATGTGGTAAAAGC+TGG | - | chr3_2:78544301-78544320 | None:intergenic | 35.0% | |
| !! | GAGATGTTGATAGTATCAGA+TGG | + | chr3_2:78544364-78544383 | Msa0427860:intron | 35.0% |
| ! | ATGTTTTTCTGTTTGACTGC+TGG | + | chr3_2:78544401-78544420 | Msa0427860:intron | 35.0% |
| AATAGTATATGTTAAGCCCG+AGG | + | chr3_2:78544738-78544757 | Msa0427860:CDS | 35.0% | |
| TGTGAAAAAAGTTCATCCTC+GGG | - | chr3_2:78544757-78544776 | None:intergenic | 35.0% | |
| !!! | GAGGATGAACTTTTTTCACA+AGG | + | chr3_2:78544757-78544776 | Msa0427860:CDS | 35.0% |
| ATAATTTCCAGTTAAGCTCG+TGG | + | chr3_2:78544843-78544862 | Msa0427860:intron | 35.0% | |
| !!! | TGAGGCAAGTTACTCTTTTT+TGG | + | chr3_2:78544907-78544926 | Msa0427860:intron | 35.0% |
| ! | TTTATTTCTCAAACGAGCAG+AGG | - | chr3_2:78544973-78544992 | None:intergenic | 35.0% |
| ! | TTCTTTTGATCTTTGCCATG+TGG | + | chr3_2:78545012-78545031 | Msa0427860:intron | 35.0% |
| ATGAGTCATTGCTAACTTTG+TGG | - | chr3_2:78545397-78545416 | None:intergenic | 35.0% | |
| GCTGAAGAATTACAGTTCAA+TGG | + | chr3_2:78545852-78545871 | Msa0427860:intron | 35.0% | |
| ! | GTGTTTGAGATGCCAAAATT+TGG | + | chr3_2:78546048-78546067 | Msa0427860:three_prime_UTR | 35.0% |
| !! | AAACACACCCCAGAAGTATT+CGG | + | chr3_2:78542171-78542190 | Msa0427860:five_prime_UTR | 40.0% |
| TATGTTGCCGAATACTTCTG+GGG | - | chr3_2:78542181-78542200 | None:intergenic | 40.0% | |
| TTTACCATGAAGGTTTACGG+TGG | + | chr3_2:78542390-78542409 | Msa0427860:intron | 40.0% | |
| CCCATTATATTCTCCCCATT+TGG | + | chr3_2:78542950-78542969 | Msa0427860:CDS | 40.0% | |
| GCCAAATGGGGAGAATATAA+TGG | - | chr3_2:78542954-78542973 | None:intergenic | 40.0% | |
| ! | ATGACGGTTTGGCTTAGAAA+TGG | - | chr3_2:78542999-78543018 | None:intergenic | 40.0% |
| ATGGATTCGTAATGACGGTT+TGG | - | chr3_2:78543010-78543029 | None:intergenic | 40.0% | |
| ! | TCGCAATGGATTCGTAATGA+CGG | - | chr3_2:78543015-78543034 | None:intergenic | 40.0% |
| TACTAGTAGAGGAAAGGGTA+GGG | - | chr3_2:78543039-78543058 | None:intergenic | 40.0% | |
| TTACTAGTAGAGGAAAGGGT+AGG | - | chr3_2:78543040-78543059 | None:intergenic | 40.0% | |
| CGTCTTACTAGTAGAGGAAA+GGG | - | chr3_2:78543044-78543063 | None:intergenic | 40.0% | |
| !! | AAAAGGCGTCTTACTAGTAG+AGG | - | chr3_2:78543050-78543069 | None:intergenic | 40.0% |
| ! | ACTTTGGAAGAAAGACCTGA+AGG | + | chr3_2:78543189-78543208 | Msa0427860:CDS | 40.0% |
| ! | CTTTGGAAGAAAGACCTGAA+GGG | + | chr3_2:78543190-78543209 | Msa0427860:CDS | 40.0% |
| !! | TACAAGGTCTCTGTTGTTTC+AGG | + | chr3_2:78543292-78543311 | Msa0427860:intron | 40.0% |
| !! | ACAAGGTCTCTGTTGTTTCA+GGG | + | chr3_2:78543293-78543312 | Msa0427860:intron | 40.0% |
| CCATGGAAATCATTGGGTTT+AGG | - | chr3_2:78543350-78543369 | None:intergenic | 40.0% | |
| CCTAAACCCAATGATTTCCA+TGG | + | chr3_2:78543347-78543366 | Msa0427860:CDS | 40.0% | |
| ATCTAGGTAAGTTTGCAGCA+GGG | - | chr3_2:78543381-78543400 | None:intergenic | 40.0% | |
| GTTGAAGAATGGGATTTGAG+TGG | + | chr3_2:78543401-78543420 | Msa0427860:CDS | 40.0% | |
| !! | TGGCTTTGCAGACTTGATTT+TGG | + | chr3_2:78543421-78543440 | Msa0427860:CDS | 40.0% |
| !!! | ATTTTGGAACAGACCACTGT+AGG | + | chr3_2:78543437-78543456 | Msa0427860:CDS | 40.0% |
| !!! | TTTTGGAACAGACCACTGTA+GGG | + | chr3_2:78543438-78543457 | Msa0427860:CDS | 40.0% |
| AAGAAAGAGGCAAACAGATG+AGG | - | chr3_2:78543576-78543595 | None:intergenic | 40.0% | |
| ACTAGTAAACTTGCACAAGG+GGG | - | chr3_2:78543698-78543717 | None:intergenic | 40.0% | |
| CACTAGTAAACTTGCACAAG+GGG | - | chr3_2:78543699-78543718 | None:intergenic | 40.0% | |
| CTCACTAGTAAACTTGCACA+AGG | - | chr3_2:78543701-78543720 | None:intergenic | 40.0% | |
| GAATTTCTCCTCCTTAAAGC+AGG | + | chr3_2:78544176-78544195 | Msa0427860:CDS | 40.0% | |
| ! | TTGATAGTATCAGATGGGTG+AGG | + | chr3_2:78544370-78544389 | Msa0427860:intron | 40.0% |
| TGATAGTATCAGATGGGTGA+GGG | + | chr3_2:78544371-78544390 | Msa0427860:intron | 40.0% | |
| ! | AAAGAGTAACTTGCCTCATG+AGG | - | chr3_2:78544905-78544924 | None:intergenic | 40.0% |
| TTTGCCATGTGGTCTATTTG+TGG | + | chr3_2:78545023-78545042 | Msa0427860:intron | 40.0% | |
| TTGCCATGTGGTCTATTTGT+GGG | + | chr3_2:78545024-78545043 | Msa0427860:intron | 40.0% | |
| TGTGTGCAGGTTATCAGAAA+CGG | - | chr3_2:78545298-78545317 | None:intergenic | 40.0% | |
| ATTGCTAACTTTGTGGCATG+TGG | - | chr3_2:78545390-78545409 | None:intergenic | 40.0% | |
| !! | ATCAGTTAGCCTTTGATCCA+TGG | + | chr3_2:78545432-78545451 | Msa0427860:intron | 40.0% |
| AGCTAATCAAACATGTCCCA+TGG | - | chr3_2:78545508-78545527 | None:intergenic | 40.0% | |
| ACTGCCTTAGAATCACTTCA+GGG | + | chr3_2:78545539-78545558 | Msa0427860:intron | 40.0% | |
| CAAACCCTGAAGTGATTCTA+AGG | - | chr3_2:78545546-78545565 | None:intergenic | 40.0% | |
| !!! | TCTGGCTCTTGTATTTTCTC+TGG | + | chr3_2:78545647-78545666 | Msa0427860:intron | 40.0% |
| TACCACCCCATTCTACAAAT+CGG | - | chr3_2:78545784-78545803 | None:intergenic | 40.0% | |
| CAGTTCAATGGGATTGATCA+TGG | + | chr3_2:78545864-78545883 | Msa0427860:CDS | 40.0% | |
| AGTGTACAAACTAACAACGG+AGG | - | chr3_2:78546145-78546164 | None:intergenic | 40.0% | |
| ACATTCACTCTCCATTTCAC+TGG | - | chr3_2:78546289-78546308 | None:intergenic | 40.0% | |
| ! | CGGAAGCTATTGGAAGTACA+CGG | - | chr3_2:78542209-78542228 | None:intergenic | 45.0% |
| TCGAAGTGAACGATGAAGGT+GGG | - | chr3_2:78542305-78542324 | None:intergenic | 45.0% | |
| CAGAGGAAAGGAAATACCTG+CGG | - | chr3_2:78542360-78542379 | None:intergenic | 45.0% | |
| ACTATGGCTGCAGAACAAGA+TGG | - | chr3_2:78542430-78542449 | None:intergenic | 45.0% | |
| AAATGCCTCGAAAGCCAAGA+AGG | + | chr3_2:78542906-78542925 | Msa0427860:exon | 45.0% | |
| GCGTCTTACTAGTAGAGGAA+AGG | - | chr3_2:78543045-78543064 | None:intergenic | 45.0% | |
| CTATTCCTGATCCACTTCCT+AGG | + | chr3_2:78543147-78543166 | Msa0427860:intron | 45.0% | |
| CATTACCTAGGAAGTGGATC+AGG | - | chr3_2:78543155-78543174 | None:intergenic | 45.0% | |
| CTGATCCACTTCCTAGGTAA+TGG | + | chr3_2:78543153-78543172 | Msa0427860:intron | 45.0% | |
| TGAAGCCATTACCTAGGAAG+TGG | - | chr3_2:78543161-78543180 | None:intergenic | 45.0% | |
| ! | GCTTGTTGAAGCCATTACCT+AGG | - | chr3_2:78543167-78543186 | None:intergenic | 45.0% |
| TGGCTTCAACAAGCACACTT+TGG | + | chr3_2:78543173-78543192 | Msa0427860:CDS | 45.0% | |
| CATCTAGGTAAGTTTGCAGC+AGG | - | chr3_2:78543382-78543401 | None:intergenic | 45.0% | |
| TGTGAAGGTAGAGGATGATG+AGG | + | chr3_2:78543466-78543485 | Msa0427860:CDS | 45.0% | |
| AAACTTGCACAAGGGGGAAA+TGG | - | chr3_2:78543692-78543711 | None:intergenic | 45.0% | |
| CTTAAAGCAGGCCAAGAGAA+GGG | + | chr3_2:78544188-78544207 | Msa0427860:CDS | 45.0% | |
| TATCAGCAATGCCCTTCTCT+TGG | - | chr3_2:78544202-78544221 | None:intergenic | 45.0% | |
| ACATCTCACCTCATCTTCTG+TGG | - | chr3_2:78544351-78544370 | None:intergenic | 45.0% | |
| GCTTAAACTGGAAGGAAGTC+CGG | - | chr3_2:78544492-78544511 | None:intergenic | 45.0% | |
| ! | ACTGAGCGATGATAGTGAAG+AGG | + | chr3_2:78544714-78544733 | Msa0427860:CDS | 45.0% |
| TGCCATGTGGTCTATTTGTG+GGG | + | chr3_2:78545025-78545044 | Msa0427860:intron | 45.0% | |
| AACCCCACAAATAGACCACA+TGG | - | chr3_2:78545030-78545049 | None:intergenic | 45.0% | |
| AGTTACACTAACCTGTGCAC+AGG | + | chr3_2:78545264-78545283 | Msa0427860:intron | 45.0% | |
| ! | CGGTTTTTAATCCTGTGCAC+AGG | - | chr3_2:78545278-78545297 | None:intergenic | 45.0% |
| !! | CTGAAGTGATTCTAAGGCAG+TGG | - | chr3_2:78545540-78545559 | None:intergenic | 45.0% |
| CACTGCCTTAGAATCACTTC+AGG | + | chr3_2:78545538-78545557 | Msa0427860:intron | 45.0% | |
| ! | ATCCGATTTGTAGAATGGGG+TGG | + | chr3_2:78545779-78545798 | Msa0427860:intron | 45.0% |
| GGGATTGATCATGGATGTTG+AGG | + | chr3_2:78545873-78545892 | Msa0427860:CDS | 45.0% | |
| CAACCAGAAGGTAATGTTCC+TGG | + | chr3_2:78545955-78545974 | Msa0427860:intron | 45.0% | |
| TGTCCAGGAACATTACCTTC+TGG | - | chr3_2:78545961-78545980 | None:intergenic | 45.0% | |
| !! | ATTTAAGAAAATTATATATT+TGG | + | chr3_2:78542572-78542591 | Msa0427860:intron | 5.0% |
| AAAGAGGCAGCGGAAGCTAT+TGG | - | chr3_2:78542219-78542238 | None:intergenic | 50.0% | |
| AAGTGAACGATGAAGGTGGG+TGG | - | chr3_2:78542302-78542321 | None:intergenic | 50.0% | |
| GTCGAAGTGAACGATGAAGG+TGG | - | chr3_2:78542306-78542325 | None:intergenic | 50.0% | |
| GAGGTCGAAGTGAACGATGA+AGG | - | chr3_2:78542309-78542328 | None:intergenic | 50.0% | |
| CGTACTAAGTGTGAGGCGAA+CGG | - | chr3_2:78542331-78542350 | None:intergenic | 50.0% | |
| GTGAGGACGTACTAAGTGTG+AGG | - | chr3_2:78542338-78542357 | None:intergenic | 50.0% | |
| GAAAGGAAATACCTGCGGTG+AGG | - | chr3_2:78542355-78542374 | None:intergenic | 50.0% | |
| AGCACCACCGTAAACCTTCA+TGG | - | chr3_2:78542397-78542416 | None:intergenic | 50.0% | |
| !! | CATCTGTAGCACCGACACTT+CGG | - | chr3_2:78542626-78542645 | None:intergenic | 50.0% |
| AGAATGTACCCTAGCAGCAG+CGG | + | chr3_2:78542754-78542773 | Msa0427860:intron | 50.0% | |
| ! | GTTTTGTACCGCTGCTGCTA+GGG | - | chr3_2:78542765-78542784 | None:intergenic | 50.0% |
| TCAGATGACTCTGACCCTTC+AGG | - | chr3_2:78543207-78543226 | None:intergenic | 50.0% | |
| GAAGGGTCAGAGTCATCTGA+CGG | + | chr3_2:78543207-78543226 | Msa0427860:CDS | 50.0% | |
| AAGGGTCAGAGTCATCTGAC+GGG | + | chr3_2:78543208-78543227 | Msa0427860:CDS | 50.0% | |
| CTTCACAACAGTCCCTACAG+TGG | - | chr3_2:78543453-78543472 | None:intergenic | 50.0% | |
| CACTGTAGGGACTGTTGTGA+AGG | + | chr3_2:78543451-78543470 | Msa0427860:CDS | 50.0% | |
| AGGGACTGTTGTGAAGGTAG+AGG | + | chr3_2:78543457-78543476 | Msa0427860:CDS | 50.0% | |
| GTAGAGGATGATGAGGACGA+AGG | + | chr3_2:78543473-78543492 | Msa0427860:CDS | 50.0% | |
| !! | TCTCTTGGCCTGCTTTAAGG+AGG | - | chr3_2:78544187-78544206 | None:intergenic | 50.0% |
| CCTTCTCTTGGCCTGCTTTA+AGG | - | chr3_2:78544190-78544209 | None:intergenic | 50.0% | |
| CCTTAAAGCAGGCCAAGAGA+AGG | + | chr3_2:78544187-78544206 | Msa0427860:CDS | 50.0% | |
| GTGATACCAGAAGACCTACG+TGG | - | chr3_2:78544256-78544275 | None:intergenic | 50.0% | |
| TCTTCTGGTATCACAGCGTG+TGG | + | chr3_2:78544262-78544281 | Msa0427860:CDS | 50.0% | |
| AGATGTGGTAAAAGCTGGGG+AGG | - | chr3_2:78544296-78544315 | None:intergenic | 50.0% | |
| GCACACTTAACAGCCAACAG+AGG | + | chr3_2:78544462-78544481 | Msa0427860:intron | 50.0% | |
| TAAACTGGAAGGAAGTCCGG+AGG | - | chr3_2:78544489-78544508 | None:intergenic | 50.0% | |
| AGAAGGACCACGAGCTTAAC+TGG | - | chr3_2:78544853-78544872 | None:intergenic | 50.0% | |
| CGTGCGCAAAGGAAAACAGA+AGG | - | chr3_2:78544870-78544889 | None:intergenic | 50.0% | |
| ! | TAACTTGCCTCATGAGGTGC+AGG | - | chr3_2:78544899-78544918 | None:intergenic | 50.0% |
| GATAACCTGCACACATGTGC+AGG | + | chr3_2:78545303-78545322 | Msa0427860:intron | 50.0% | |
| TGAATCCTGCACATGTGTGC+AGG | - | chr3_2:78545311-78545330 | None:intergenic | 50.0% | |
| TTGGCATCTCAAACACCTGC+AGG | - | chr3_2:78546044-78546063 | None:intergenic | 50.0% | |
| TAGCTTCCGCTGCCTCTTTC+CGG | + | chr3_2:78542220-78542239 | Msa0427860:five_prime_UTR | 55.0% | |
| TCTGTGGTGTTCAGCGCTCA+CGG | + | chr3_2:78542274-78542293 | Msa0427860:five_prime_UTR | 55.0% | |
| ACTAAGTGTGAGGCGAACGG+AGG | - | chr3_2:78542328-78542347 | None:intergenic | 55.0% | |
| ACTTAGTACGTCCTCACCGC+AGG | + | chr3_2:78542341-78542360 | Msa0427860:five_prime_UTR | 55.0% | |
| GGACAGGACACGGACACATA+TGG | - | chr3_2:78542605-78542624 | None:intergenic | 55.0% | |
| !! | GGTTTTGTACCGCTGCTGCT+AGG | - | chr3_2:78542766-78542785 | None:intergenic | 55.0% |
| ! | TGACGCCTTCTTGGCTTTCG+AGG | - | chr3_2:78542914-78542933 | None:intergenic | 55.0% |
| TTGGGTCGTTGACGCCTTCT+TGG | - | chr3_2:78542923-78542942 | None:intergenic | 55.0% | |
| GGCGTCAACGACCCAAATCT+TGG | + | chr3_2:78542927-78542946 | Msa0427860:CDS | 55.0% | |
| ATGCCATACGAGCAAGAGCG+CGG | - | chr3_2:78542976-78542995 | None:intergenic | 55.0% | |
| GGAAAGGGTAGGGTTCGCAA+TGG | - | chr3_2:78543029-78543048 | None:intergenic | 55.0% | |
| AGGGTCAGAGTCATCTGACG+GGG | + | chr3_2:78543209-78543228 | Msa0427860:CDS | 55.0% | |
| GCAGCAGGGTCTTAACTCCA+TGG | - | chr3_2:78543367-78543386 | None:intergenic | 55.0% | |
| AGCACACCACGTAGGTCTTC+TGG | + | chr3_2:78544247-78544266 | Msa0427860:CDS | 55.0% | |
| GTGGTAAAAGCTGGGGAGGA+AGG | - | chr3_2:78544292-78544311 | None:intergenic | 55.0% | |
| GTCATGGGCCACAGAAGATG+AGG | + | chr3_2:78544340-78544359 | Msa0427860:CDS | 55.0% | |
| AACAGCCAACAGAGGACCTC+CGG | + | chr3_2:78544470-78544489 | Msa0427860:intron | 55.0% | |
| CGAGCTGTTAGTGACAGCTG+AGG | + | chr3_2:78545239-78545258 | Msa0427860:intron | 55.0% | |
| GAGGAGGCTCCATGGATCAA+AGG | - | chr3_2:78545444-78545463 | None:intergenic | 55.0% | |
| ! | TTCAGTGGCGGAGTCTGGAT+CGG | - | chr3_2:78545466-78545485 | None:intergenic | 55.0% |
| ! | CTCTATTCAGTGGCGGAGTC+TGG | - | chr3_2:78545471-78545490 | None:intergenic | 55.0% |
| GAAGGCTGAAGGCAACCAGA+AGG | + | chr3_2:78545943-78545962 | Msa0427860:three_prime_UTR | 55.0% | |
| CAAATAGGTTGCGCCGCTGC+CGG | - | chr3_2:78542242-78542261 | None:intergenic | 60.0% | |
| CCGACACTTCGGACAGGACA+CGG | - | chr3_2:78542615-78542634 | None:intergenic | 60.0% | |
| CCGTGTCCTGTCCGAAGTGT+CGG | + | chr3_2:78542612-78542631 | Msa0427860:intron | 60.0% | |
| !! | GTAGCACCGACACTTCGGAC+AGG | - | chr3_2:78542621-78542640 | None:intergenic | 60.0% |
| ! | AGCAAGAGCGCGGCCAAATG+GGG | - | chr3_2:78542966-78542985 | None:intergenic | 60.0% |
| ! | GAGCAAGAGCGCGGCCAAAT+GGG | - | chr3_2:78542967-78542986 | None:intergenic | 60.0% |
| GGGGAACAAGCACACCACGT+AGG | + | chr3_2:78544239-78544258 | Msa0427860:CDS | 60.0% | |
| GAAGTCCGGAGGTCCTCTGT+TGG | - | chr3_2:78544478-78544497 | None:intergenic | 60.0% | |
| GCAGCAACCTGCACCTCATG+AGG | + | chr3_2:78544889-78544908 | Msa0427860:intron | 60.0% | |
| CGGCAGCGGCGCAACCTATT+TGG | + | chr3_2:78542240-78542259 | Msa0427860:five_prime_UTR | 65.0% | |
| ! | CGAGCAAGAGCGCGGCCAAA+TGG | - | chr3_2:78542968-78542987 | None:intergenic | 65.0% |
| TGGCCGCGCTCTTGCTCGTA+TGG | + | chr3_2:78542970-78542989 | Msa0427860:CDS | 65.0% | |
| GCAGGTTGCTGCGTGCGCAA+AGG | - | chr3_2:78544881-78544900 | None:intergenic | 65.0% | |
| CTGGATCGGAGGAGGCTCCA+TGG | - | chr3_2:78545452-78545471 | None:intergenic | 65.0% | |
| ! | AGTGGCGGAGTCTGGATCGG+AGG | - | chr3_2:78545463-78545482 | None:intergenic | 65.0% |
| CCGCTGCCGGAAAGAGGCAG+CGG | - | chr3_2:78542229-78542248 | None:intergenic | 70.0% | |
| CCGCTGCCTCTTTCCGGCAG+CGG | + | chr3_2:78542226-78542245 | Msa0427860:five_prime_UTR | 70.0% | |
| GTTGCGCCGCTGCCGGAAAG+AGG | - | chr3_2:78542235-78542254 | None:intergenic | 70.0% | |
| GGCGGAGTCTGGATCGGAGG+AGG | - | chr3_2:78545460-78545479 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 78542163 | 78546331 | 78542163 | ID=Msa0427860;Name=Msa0427860 |
| chr3_2 | mRNA | 78542163 | 78546331 | 78542163 | ID=Msa0427860-mRNA-1;Parent=Msa0427860;Name=Msa0427860-mRNA-1;_AED=0.14;_eAED=0.14;_QI=210|0.75|0.88|1|0.75|0.66|9|355|276 |
| chr3_2 | exon | 78542163 | 78542362 | 78542163 | ID=Msa0427860-mRNA-1:exon:20822;Parent=Msa0427860-mRNA-1 |
| chr3_2 | exon | 78542898 | 78543055 | 78542898 | ID=Msa0427860-mRNA-1:exon:20823;Parent=Msa0427860-mRNA-1 |
| chr3_2 | exon | 78543169 | 78543239 | 78543169 | ID=Msa0427860-mRNA-1:exon:20824;Parent=Msa0427860-mRNA-1 |
| chr3_2 | exon | 78543314 | 78543538 | 78543314 | ID=Msa0427860-mRNA-1:exon:20825;Parent=Msa0427860-mRNA-1 |
| chr3_2 | exon | 78544176 | 78544361 | 78544176 | ID=Msa0427860-mRNA-1:exon:20826;Parent=Msa0427860-mRNA-1 |
| chr3_2 | exon | 78544475 | 78544540 | 78544475 | ID=Msa0427860-mRNA-1:exon:20827;Parent=Msa0427860-mRNA-1 |
| chr3_2 | exon | 78544685 | 78544778 | 78544685 | ID=Msa0427860-mRNA-1:exon:20828;Parent=Msa0427860-mRNA-1 |
| chr3_2 | exon | 78545853 | 78545964 | 78545853 | ID=Msa0427860-mRNA-1:exon:20829;Parent=Msa0427860-mRNA-1 |
| chr3_2 | exon | 78546048 | 78546331 | 78546048 | ID=Msa0427860-mRNA-1:exon:20830;Parent=Msa0427860-mRNA-1 |
| chr3_2 | five_prime_UTR | 78542163 | 78542362 | 78542163 | ID=Msa0427860-mRNA-1:five_prime_utr;Parent=Msa0427860-mRNA-1 |
| chr3_2 | five_prime_UTR | 78542898 | 78542907 | 78542898 | ID=Msa0427860-mRNA-1:five_prime_utr;Parent=Msa0427860-mRNA-1 |
| chr3_2 | CDS | 78542908 | 78543055 | 78542908 | ID=Msa0427860-mRNA-1:cds;Parent=Msa0427860-mRNA-1 |
| chr3_2 | CDS | 78543169 | 78543239 | 78543169 | ID=Msa0427860-mRNA-1:cds;Parent=Msa0427860-mRNA-1 |
| chr3_2 | CDS | 78543314 | 78543538 | 78543314 | ID=Msa0427860-mRNA-1:cds;Parent=Msa0427860-mRNA-1 |
| chr3_2 | CDS | 78544176 | 78544361 | 78544176 | ID=Msa0427860-mRNA-1:cds;Parent=Msa0427860-mRNA-1 |
| chr3_2 | CDS | 78544475 | 78544540 | 78544475 | ID=Msa0427860-mRNA-1:cds;Parent=Msa0427860-mRNA-1 |
| chr3_2 | CDS | 78544685 | 78544778 | 78544685 | ID=Msa0427860-mRNA-1:cds;Parent=Msa0427860-mRNA-1 |
| chr3_2 | CDS | 78545853 | 78545893 | 78545853 | ID=Msa0427860-mRNA-1:cds;Parent=Msa0427860-mRNA-1 |
| chr3_2 | three_prime_UTR | 78545894 | 78545964 | 78545894 | ID=Msa0427860-mRNA-1:three_prime_utr;Parent=Msa0427860-mRNA-1 |
| chr3_2 | three_prime_UTR | 78546048 | 78546331 | 78546048 | ID=Msa0427860-mRNA-1:three_prime_utr;Parent=Msa0427860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
