Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0474090 | XP_003602689.1 | 88.849 | 278 | 22 | 1 | 1 | 269 | 1 | 278 | 3.04e-176 | 498 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0474090 | sp|O64885|BCCIP_ARATH | 53.957 | 278 | 108 | 6 | 1 | 261 | 1 | 275 | 1.34e-77 | 241 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0474090 | G7J2M5 | 88.849 | 278 | 22 | 1 | 1 | 269 | 1 | 278 | 1.45e-176 | 498 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007850 | Msa0474090 | -0.801367 | 9.309401e-49 | -8.615850e-47 |
| Msa0008200 | Msa0474090 | -0.826832 | 2.184518e-54 | -8.615850e-47 |
| Msa0010490 | Msa0474090 | -0.812592 | 3.922456e-51 | -8.615850e-47 |
| Msa0010500 | Msa0474090 | -0.810755 | 9.845064e-51 | -8.615850e-47 |
| Msa0020390 | Msa0474090 | -0.831840 | 1.328676e-55 | -8.615850e-47 |
| Msa0029260 | Msa0474090 | -0.829257 | 5.696756e-55 | -8.615850e-47 |
| Msa0033880 | Msa0474090 | -0.814512 | 1.483471e-51 | -8.615850e-47 |
| Msa0036540 | Msa0474090 | -0.822332 | 2.506701e-53 | -8.615850e-47 |
| Msa0042280 | Msa0474090 | -0.802418 | 5.664506e-49 | -8.615850e-47 |
| Msa0043860 | Msa0474090 | -0.815318 | 9.828612e-52 | -8.615850e-47 |
| Msa0055100 | Msa0474090 | -0.814550 | 1.455187e-51 | -8.615850e-47 |
| Msa0057610 | Msa0474090 | -0.803468 | 3.436361e-49 | -8.615850e-47 |
| Msa0059950 | Msa0474090 | -0.818319 | 2.085299e-52 | -8.615850e-47 |
| Msa0061970 | Msa0474090 | -0.803982 | 2.688008e-49 | -8.615850e-47 |
| Msa0068020 | Msa0474090 | -0.858690 | 6.927535e-63 | -8.615850e-47 |
| Msa0077010 | Msa0474090 | -0.823282 | 1.506521e-53 | -8.615850e-47 |
| Msa0080730 | Msa0474090 | -0.802109 | 6.556609e-49 | -8.615850e-47 |
| Msa0091610 | Msa0474090 | -0.814568 | 1.442171e-51 | -8.615850e-47 |
| Msa0093010 | Msa0474090 | -0.812206 | 4.763622e-51 | -8.615850e-47 |
| Msa0095360 | Msa0474090 | -0.805765 | 1.139620e-49 | -8.615850e-47 |
| Msa0095770 | Msa0474090 | -0.810065 | 1.387150e-50 | -8.615850e-47 |
| Msa0101180 | Msa0474090 | -0.829822 | 4.150984e-55 | -8.615850e-47 |
| Msa0103790 | Msa0474090 | -0.825191 | 5.362151e-54 | -8.615850e-47 |
| Msa0113240 | Msa0474090 | -0.842220 | 2.953195e-58 | -8.615850e-47 |
| Msa0115370 | Msa0474090 | -0.845009 | 5.305615e-59 | -8.615850e-47 |
| Msa0116380 | Msa0474090 | -0.801670 | 8.071708e-49 | -8.615850e-47 |
| Msa0118540 | Msa0474090 | -0.838334 | 3.059620e-57 | -8.615850e-47 |
| Msa0121820 | Msa0474090 | -0.818076 | 2.366559e-52 | -8.615850e-47 |
| Msa0123510 | Msa0474090 | -0.813362 | 2.659472e-51 | -8.615850e-47 |
| Msa0126840 | Msa0474090 | -0.808469 | 3.049740e-50 | -8.615850e-47 |
| Msa0126880 | Msa0474090 | -0.803012 | 4.270480e-49 | -8.615850e-47 |
| Msa0127850 | Msa0474090 | -0.818390 | 2.009752e-52 | -8.615850e-47 |
| Msa0144430 | Msa0474090 | -0.805272 | 1.446488e-49 | -8.615850e-47 |
| Msa0150260 | Msa0474090 | -0.820835 | 5.560802e-53 | -8.615850e-47 |
| Msa0159420 | Msa0474090 | -0.808707 | 2.712875e-50 | -8.615850e-47 |
| Msa0166750 | Msa0474090 | -0.852092 | 5.791357e-61 | -8.615850e-47 |
| Msa0167480 | Msa0474090 | -0.820248 | 7.583637e-53 | -8.615850e-47 |
| Msa0169300 | Msa0474090 | -0.826457 | 2.684772e-54 | -8.615850e-47 |
| Msa0183460 | Msa0474090 | -0.815972 | 7.029143e-52 | -8.615850e-47 |
| Msa0183870 | Msa0474090 | -0.843735 | 1.166805e-58 | -8.615850e-47 |
| Msa0188350 | Msa0474090 | -0.808441 | 3.092113e-50 | -8.615850e-47 |
| Msa0190590 | Msa0474090 | -0.810859 | 9.349565e-51 | -8.615850e-47 |
| Msa0191080 | Msa0474090 | -0.819391 | 1.190514e-52 | -8.615850e-47 |
| Msa0209080 | Msa0474090 | -0.810518 | 1.107435e-50 | -8.615850e-47 |
| Msa0209500 | Msa0474090 | -0.821155 | 4.693400e-53 | -8.615850e-47 |
| Msa0230520 | Msa0474090 | -0.803867 | 2.840059e-49 | -8.615850e-47 |
| Msa0231100 | Msa0474090 | -0.845801 | 3.237685e-59 | -8.615850e-47 |
| Msa0371500 | Msa0474090 | -0.806391 | 8.414705e-50 | -8.615850e-47 |
| Msa0380100 | Msa0474090 | -0.815908 | 7.265017e-52 | -8.615850e-47 |
| Msa0384880 | Msa0474090 | -0.822650 | 2.115168e-53 | -8.615850e-47 |
| Msa0385490 | Msa0474090 | -0.805035 | 1.621338e-49 | -8.615850e-47 |
| Msa0385500 | Msa0474090 | -0.846059 | 2.754637e-59 | -8.615850e-47 |
| Msa0389510 | Msa0474090 | -0.847719 | 9.678745e-60 | -8.615850e-47 |
| Msa0403770 | Msa0474090 | -0.816632 | 5.003787e-52 | -8.615850e-47 |
| Msa0408240 | Msa0474090 | 0.824128 | 9.545027e-54 | -8.615850e-47 |
| Msa0419720 | Msa0474090 | -0.824621 | 7.309756e-54 | -8.615850e-47 |
| Msa0423750 | Msa0474090 | -0.816039 | 6.792036e-52 | -8.615850e-47 |
| Msa0427860 | Msa0474090 | 0.989690 | 3.228673e-179 | -8.615850e-47 |
| Msa0443390 | Msa0474090 | -0.836166 | 1.097250e-56 | -8.615850e-47 |
| Msa0450930 | Msa0474090 | -0.821617 | 3.671235e-53 | -8.615850e-47 |
| Msa0458640 | Msa0474090 | -0.806841 | 6.762778e-50 | -8.615850e-47 |
| Msa0469620 | Msa0474090 | 0.803575 | 3.265144e-49 | -8.615850e-47 |
| Msa0474090 | Msa0484740 | -0.820058 | 8.383639e-53 | -8.615850e-47 |
| Msa0474090 | Msa0485710 | -0.815502 | 8.945615e-52 | -8.615850e-47 |
| Msa0474090 | Msa0506400 | -0.823900 | 1.079813e-53 | -8.615850e-47 |
| Msa0474090 | Msa0511770 | -0.845593 | 3.686992e-59 | -8.615850e-47 |
| Msa0474090 | Msa0523810 | -0.819922 | 9.006436e-53 | -8.615850e-47 |
| Msa0474090 | Msa0531250 | -0.801979 | 6.971865e-49 | -8.615850e-47 |
| Msa0474090 | Msa0534750 | -0.824890 | 6.315805e-54 | -8.615850e-47 |
| Msa0474090 | Msa0540550 | -0.818912 | 1.530335e-52 | -8.615850e-47 |
| Msa0474090 | Msa0542560 | -0.807178 | 5.737323e-50 | -8.615850e-47 |
| Msa0474090 | Msa0544840 | -0.806336 | 8.644099e-50 | -8.615850e-47 |
| Msa0474090 | Msa0547160 | -0.811219 | 7.811689e-51 | -8.615850e-47 |
| Msa0474090 | Msa0547990 | -0.803351 | 3.633864e-49 | -8.615850e-47 |
| Msa0474090 | Msa0580230 | -0.849808 | 2.548479e-60 | -8.615850e-47 |
| Msa0474090 | Msa0580280 | -0.832053 | 1.177380e-55 | -8.615850e-47 |
| Msa0474090 | Msa0581110 | -0.809102 | 2.234029e-50 | -8.615850e-47 |
| Msa0474090 | Msa0593700 | -0.808479 | 3.034678e-50 | -8.615850e-47 |
| Msa0474090 | Msa0600450 | -0.816939 | 4.269374e-52 | -8.615850e-47 |
| Msa0474090 | Msa0602370 | -0.810647 | 1.038865e-50 | -8.615850e-47 |
| Msa0474090 | Msa0603570 | -0.852189 | 5.435137e-61 | -8.615850e-47 |
| Msa0474090 | Msa0607690 | -0.819711 | 1.006057e-52 | -8.615850e-47 |
| Msa0474090 | Msa0609000 | -0.802934 | 4.432166e-49 | -8.615850e-47 |
| Msa0474090 | Msa0609220 | -0.801594 | 8.364973e-49 | -8.615850e-47 |
| Msa0474090 | Msa0610550 | -0.804564 | 2.033582e-49 | -8.615850e-47 |
| Msa0474090 | Msa0612720 | -0.800710 | 1.268552e-48 | -8.615850e-47 |
| Msa0474090 | Msa0615580 | -0.855923 | 4.553241e-62 | -8.615850e-47 |
| Msa0474090 | Msa0615680 | -0.813429 | 2.570889e-51 | -8.615850e-47 |
| Msa0474090 | Msa0618930 | -0.825948 | 3.548607e-54 | -8.615850e-47 |
| Msa0474090 | Msa0628420 | -0.802358 | 5.825802e-49 | -8.615850e-47 |
| Msa0474090 | Msa0631350 | -0.840019 | 1.118971e-57 | -8.615850e-47 |
| Msa0474090 | Msa0633570 | -0.812114 | 4.988754e-51 | -8.615850e-47 |
| Msa0474090 | Msa0640940 | -0.807123 | 5.894459e-50 | -8.615850e-47 |
| Msa0474090 | Msa0643320 | -0.810492 | 1.122098e-50 | -8.615850e-47 |
| Msa0474090 | Msa0659990 | -0.804452 | 2.146029e-49 | -8.615850e-47 |
| Msa0474090 | Msa0662630 | -0.831856 | 1.316646e-55 | -8.615850e-47 |
| Msa0474090 | Msa0666230 | -0.829327 | 5.476573e-55 | -8.615850e-47 |
| Msa0474090 | Msa0669720 | -0.859607 | 3.679392e-63 | -8.615850e-47 |
| Msa0474090 | Msa0669760 | -0.842255 | 2.891824e-58 | -8.615850e-47 |
| Msa0474090 | Msa0672100 | -0.849050 | 4.145639e-60 | -8.615850e-47 |
| Msa0474090 | Msa0679360 | -0.825260 | 5.163691e-54 | -8.615850e-47 |
| Msa0474090 | Msa0683140 | -0.803005 | 4.285869e-49 | -8.615850e-47 |
| Msa0474090 | Msa0683780 | -0.818691 | 1.717468e-52 | -8.615850e-47 |
| Msa0474090 | Msa0693210 | -0.842791 | 2.084154e-58 | -8.615850e-47 |
| Msa0474090 | Msa0697720 | -0.821418 | 4.081085e-53 | -8.615850e-47 |
| Msa0474090 | Msa0699190 | -0.830376 | 3.041608e-55 | -8.615850e-47 |
| Msa0474090 | Msa0705090 | -0.812660 | 3.792061e-51 | -8.615850e-47 |
| Msa0474090 | Msa0746170 | -0.801348 | 9.392700e-49 | -8.615850e-47 |
| Msa0474090 | Msa0780930 | -0.807030 | 6.168378e-50 | -8.615850e-47 |
| Msa0474090 | Msa0800370 | -0.817546 | 3.117512e-52 | -8.615850e-47 |
| Msa0474090 | Msa0806880 | -0.806181 | 9.318648e-50 | -8.615850e-47 |
| Msa0474090 | Msa0818770 | -0.808288 | 3.333842e-50 | -8.615850e-47 |
| Msa0474090 | Msa0822170 | -0.810016 | 1.421357e-50 | -8.615850e-47 |
| Msa0474090 | Msa0822180 | -0.804736 | 1.871769e-49 | -8.615850e-47 |
| Msa0474090 | Msa0826500 | -0.812631 | 3.846840e-51 | -8.615850e-47 |
| Msa0474090 | Msa0833190 | 0.858810 | 6.380096e-63 | -8.615850e-47 |
| Msa0474090 | Msa0887250 | -0.813266 | 2.791549e-51 | -8.615850e-47 |
| Msa0474090 | Msa0892640 | -0.830744 | 2.471351e-55 | -8.615850e-47 |
| Msa0474090 | Msa0897200 | -0.819145 | 1.354470e-52 | -8.615850e-47 |
| Msa0474090 | Msa0905750 | -0.823805 | 1.136533e-53 | -8.615850e-47 |
| Msa0474090 | Msa0913240 | -0.837468 | 5.105634e-57 | -8.615850e-47 |
| Msa0474090 | Msa0944200 | -0.828238 | 1.004753e-54 | -8.615850e-47 |
| Msa0474090 | Msa0944610 | -0.829023 | 6.490944e-55 | -8.615850e-47 |
| Msa0474090 | Msa0973320 | -0.820502 | 6.630272e-53 | -8.615850e-47 |
| Msa0474090 | Msa0974950 | -0.803187 | 3.928863e-49 | -8.615850e-47 |
| Msa0474090 | Msa0980540 | -0.820083 | 8.273069e-53 | -8.615850e-47 |
| Msa0474090 | Msa1025940 | -0.811857 | 5.676436e-51 | -8.615850e-47 |
| Msa0474090 | Msa1039900 | -0.844334 | 8.064458e-59 | -8.615850e-47 |
| Msa0474090 | Msa1070390 | -0.813115 | 3.012942e-51 | -8.615850e-47 |
| Msa0474090 | Msa1072710 | -0.807398 | 5.155451e-50 | -8.615850e-47 |
| Msa0474090 | Msa1084500 | 0.828578 | 8.317538e-55 | -8.615850e-47 |
| Msa0474090 | Msa1106210 | -0.823003 | 1.749546e-53 | -8.615850e-47 |
| Msa0474090 | Msa1123350 | -0.816791 | 4.610177e-52 | -8.615850e-47 |
| Msa0474090 | Msa1125790 | 0.832268 | 1.041483e-55 | -8.615850e-47 |
| Msa0474090 | Msa1126830 | -0.812429 | 4.258586e-51 | -8.615850e-47 |
| Msa0474090 | Msa1128280 | -0.807690 | 4.469412e-50 | -8.615850e-47 |
| Msa0474090 | Msa1131560 | -0.820158 | 7.949933e-53 | -8.615850e-47 |
| Msa0474090 | Msa1133230 | -0.805695 | 1.179157e-49 | -8.615850e-47 |
| Msa0474090 | Msa1133250 | -0.819579 | 1.078485e-52 | -8.615850e-47 |
| Msa0474090 | Msa1165270 | -0.823716 | 1.192214e-53 | -8.615850e-47 |
| Msa0474090 | Msa1165780 | -0.857155 | 1.978923e-62 | -8.615850e-47 |
| Msa0474090 | Msa1166870 | -0.834376 | 3.106288e-56 | -8.615850e-47 |
| Msa0474090 | Msa1173900 | -0.800866 | 1.178573e-48 | -8.615850e-47 |
| Msa0474090 | Msa1175350 | -0.812342 | 4.448842e-51 | -8.615850e-47 |
| Msa0474090 | Msa1176360 | -0.807046 | 6.120483e-50 | -8.615850e-47 |
| Msa0474090 | Msa1178580 | -0.814401 | 1.569607e-51 | -8.615850e-47 |
| Msa0474090 | Msa1202580 | -0.817433 | 3.306924e-52 | -8.615850e-47 |
| Msa0474090 | Msa1206650 | -0.829927 | 3.914554e-55 | -8.615850e-47 |
| Msa0474090 | Msa1208020 | -0.823164 | 1.604751e-53 | -8.615850e-47 |
| Msa0474090 | Msa1211830 | -0.834379 | 3.101395e-56 | -8.615850e-47 |
| Msa0474090 | Msa1227690 | -0.801214 | 1.000864e-48 | -8.615850e-47 |
| Msa0474090 | Msa1233850 | -0.843024 | 1.806931e-58 | -8.615850e-47 |
| Msa0474090 | Msa1253810 | -0.833590 | 4.886171e-56 | -8.615850e-47 |
| Msa0474090 | Msa1256770 | -0.803176 | 3.949654e-49 | -8.615850e-47 |
| Msa0474090 | Msa1262890 | -0.821851 | 3.240633e-53 | -8.615850e-47 |
| Msa0474090 | Msa1264210 | -0.828252 | 9.970561e-55 | -8.615850e-47 |
| Msa0474090 | Msa1275480 | 0.834706 | 2.566133e-56 | -8.615850e-47 |
| Msa0474090 | Msa1276150 | -0.814144 | 1.788757e-51 | -8.615850e-47 |
| Msa0474090 | Msa1276970 | -0.808251 | 3.394143e-50 | -8.615850e-47 |
| Msa0474090 | Msa1296830 | -0.840859 | 6.746401e-58 | -8.615850e-47 |
| Msa0474090 | Msa1299700 | -0.807714 | 4.417400e-50 | -8.615850e-47 |
| Msa0474090 | Msa1303580 | -0.830124 | 3.503152e-55 | -8.615850e-47 |
| Msa0474090 | Msa1307180 | -0.811228 | 7.777367e-51 | -8.615850e-47 |
| Msa0474090 | Msa1316360 | -0.818589 | 1.811486e-52 | -8.615850e-47 |
| Msa0474090 | Msa1323800 | -0.815472 | 9.086246e-52 | -8.615850e-47 |
| Msa0474090 | Msa1329540 | -0.815078 | 1.111618e-51 | -8.615850e-47 |
| Msa0474090 | Msa1331250 | -0.834742 | 2.514407e-56 | -8.615850e-47 |
| Msa0474090 | Msa1336560 | -0.828651 | 7.986243e-55 | -8.615850e-47 |
| Msa0474090 | Msa1351540 | -0.866174 | 3.457052e-65 | -8.615850e-47 |
| Msa0474090 | Msa1352890 | -0.833996 | 3.868399e-56 | -8.615850e-47 |
| Msa0474090 | Msa1359270 | -0.815628 | 8.387430e-52 | -8.615850e-47 |
| Msa0474090 | Msa1362420 | -0.821639 | 3.627206e-53 | -8.615850e-47 |
| Msa0474090 | Msa1369190 | -0.806160 | 9.415879e-50 | -8.615850e-47 |
| Msa0474090 | Msa1374830 | -0.825257 | 5.174326e-54 | -8.615850e-47 |
| Msa0474090 | Msa1395730 | -0.809008 | 2.339088e-50 | -8.615850e-47 |
| Msa0474090 | Msa1411950 | -0.818437 | 1.961481e-52 | -8.615850e-47 |
| Msa0474090 | Msa1422810 | -0.804442 | 2.156285e-49 | -8.615850e-47 |
| Msa0474090 | Msa1432480 | -0.806406 | 8.353194e-50 | -8.615850e-47 |
| Msa0474090 | Msa1433600 | -0.807420 | 5.098693e-50 | -8.615850e-47 |
| Msa0474090 | Msa1447890 | -0.811442 | 6.988106e-51 | -8.615850e-47 |
| Msa0474090 | Msa1454450 | -0.816224 | 6.175074e-52 | -8.615850e-47 |
| Msa0474090 | Msa1454680 | -0.813869 | 2.057724e-51 | -8.615850e-47 |
| Msa0474090 | Msa1458090 | -0.826026 | 3.399513e-54 | -8.615850e-47 |
| Msa0474090 | Msa1459960 | -0.811899 | 5.558058e-51 | -8.615850e-47 |
| Msa0474090 | Msa1460320 | 0.801466 | 8.887870e-49 | -8.615850e-47 |
| Msa0241830 | Msa0474090 | -0.802270 | 6.074476e-49 | -8.615850e-47 |
| Msa0244970 | Msa0474090 | -0.803139 | 4.019478e-49 | -8.615850e-47 |
| Msa0244980 | Msa0474090 | -0.836521 | 8.912103e-57 | -8.615850e-47 |
| Msa0245060 | Msa0474090 | -0.814535 | 1.466623e-51 | -8.615850e-47 |
| Msa0245580 | Msa0474090 | -0.817511 | 3.175081e-52 | -8.615850e-47 |
| Msa0249580 | Msa0474090 | -0.808926 | 2.436593e-50 | -8.615850e-47 |
| Msa0257490 | Msa0474090 | -0.845006 | 5.313931e-59 | -8.615850e-47 |
| Msa0262480 | Msa0474090 | -0.800238 | 1.583217e-48 | -8.615850e-47 |
| Msa0269470 | Msa0474090 | -0.824553 | 7.585472e-54 | -8.615850e-47 |
| Msa0275360 | Msa0474090 | -0.818199 | 2.219713e-52 | -8.615850e-47 |
| Msa0281530 | Msa0474090 | -0.801182 | 1.015821e-48 | -8.615850e-47 |
| Msa0283420 | Msa0474090 | -0.857092 | 2.065441e-62 | -8.615850e-47 |
| Msa0296250 | Msa0474090 | -0.821059 | 4.937874e-53 | -8.615850e-47 |
| Msa0296790 | Msa0474090 | -0.840079 | 1.078944e-57 | -8.615850e-47 |
| Msa0296920 | Msa0474090 | -0.828430 | 9.027725e-55 | -8.615850e-47 |
| Msa0304590 | Msa0474090 | -0.819835 | 9.428046e-53 | -8.615850e-47 |
| Msa0304660 | Msa0474090 | -0.839133 | 1.900850e-57 | -8.615850e-47 |
| Msa0320590 | Msa0474090 | -0.822332 | 2.506701e-53 | -8.615850e-47 |
| Msa0321690 | Msa0474090 | -0.844350 | 7.983166e-59 | -8.615850e-47 |
| Msa0331700 | Msa0474090 | -0.837791 | 4.220222e-57 | -8.615850e-47 |
| Msa0348830 | Msa0474090 | -0.800090 | 1.696336e-48 | -8.615850e-47 |
| Msa0357900 | Msa0474090 | -0.810474 | 1.131980e-50 | -8.615850e-47 |
| Msa0358770 | Msa0474090 | -0.812241 | 4.679960e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0474090 | MtrunA17_Chr3g0130791 | 88.849 | 278 | 22 | 1 | 1 | 269 | 1 | 278 | 2.80e-180 | 498 |
| Msa0474090 | MtrunA17_Chr3g0116291 | 83.986 | 281 | 33 | 2 | 1 | 269 | 1 | 281 | 2.70e-171 | 476 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0474090 | AT2G44510.1 | 53.957 | 278 | 108 | 6 | 1 | 261 | 1 | 275 | 1.36e-78 | 241 |
| Msa0474090 | AT5G03830.2 | 47.303 | 241 | 82 | 7 | 1 | 232 | 1 | 205 | 1.36e-46 | 157 |
| Msa0474090 | AT5G03830.3 | 47.303 | 241 | 82 | 7 | 1 | 232 | 1 | 205 | 1.36e-46 | 157 |
| Msa0474090 | AT5G03830.1 | 47.303 | 241 | 82 | 7 | 1 | 232 | 1 | 205 | 1.36e-46 | 157 |
Find 120 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTCTTGGCCTGCTTTA+AGG | 0.079662 | 3_3:-76913310 | None:intergenic |
| CGGCAGCGGCGCAACCTATT+TGG | 0.161136 | 3_3:+76908855 | Msa0474090:five_prime_UTR |
| TTGTTACCGCTCTTAATTTA+TGG | 0.174434 | 3_3:+76912628 | Msa0474090:CDS |
| TGGCTTTGCAGACTTGATTT+TGG | 0.241139 | 3_3:+76912542 | Msa0474090:CDS |
| GTGTTTGAGATGCCAAAATT+TGG | 0.243849 | 3_3:+76915171 | Msa0474090:three_prime_UTR |
| TGATAAGTTGATATTACTTT+TGG | 0.246157 | 3_3:+76913340 | Msa0474090:CDS |
| AATATGTTGCCGAATACTTC+TGG | 0.249807 | 3_3:-76908795 | None:intergenic |
| TTGGGTCGTTGACGCCTTCT+TGG | 0.252549 | 3_3:-76912041 | None:intergenic |
| TAGCTTCCGCTGCCTCTTTC+CGG | 0.267528 | 3_3:+76908835 | Msa0474090:five_prime_UTR |
| AGAGTGTTAAATTGCCAAAT+AGG | 0.279027 | 3_3:-76908869 | None:intergenic |
| GAATATAATGGGCCAAGATT+TGG | 0.291911 | 3_3:-76912060 | None:intergenic |
| CCATGGAAATCATTGGGTTT+AGG | 0.305918 | 3_3:-76912468 | None:intergenic |
| GCCAAATGGGGAGAATATAA+TGG | 0.310615 | 3_3:-76912072 | None:intergenic |
| CTCTTAATTTATGGAGGTAT+AGG | 0.323978 | 3_3:+76912637 | Msa0474090:CDS |
| CGAGCAAGAGCGCGGCCAAA+TGG | 0.341638 | 3_3:-76912086 | None:intergenic |
| CCCATTATATTCTCCCCATT+TGG | 0.342026 | 3_3:+76912071 | Msa0474090:CDS |
| AATATAATGGGCCAAGATTT+GGG | 0.346246 | 3_3:-76912059 | None:intergenic |
| AGCACACCACGTAGGTCTTC+TGG | 0.360860 | 3_3:+76913370 | Msa0474090:CDS |
| CTTAACTCCATGGAAATCAT+TGG | 0.376136 | 3_3:-76912475 | None:intergenic |
| TCTTAATTTATGGAGGTATA+GGG | 0.378376 | 3_3:+76912638 | Msa0474090:CDS |
| TGTTTGAGATGCCAAAATTT+GGG | 0.380626 | 3_3:+76915172 | Msa0474090:three_prime_UTR |
| TCAGATGACTCTGACCCTTC+AGG | 0.384150 | 3_3:-76912325 | None:intergenic |
| GAATTATATAATGCTTAAAC+TGG | 0.392923 | 3_3:-76913624 | None:intergenic |
| GAGCAAGAGCGCGGCCAAAT+GGG | 0.392951 | 3_3:-76912085 | None:intergenic |
| TTAACTTCTTTAATAAATGA+AGG | 0.410212 | 3_3:+76915048 | Msa0474090:three_prime_UTR |
| AAAGAGGCAGCGGAAGCTAT+TGG | 0.413377 | 3_3:-76908831 | None:intergenic |
| AAGAGATAGAGAATATGAAT+TGG | 0.414653 | 3_3:+76915356 | Msa0474090:three_prime_UTR |
| ATGACGGTTTGGCTTAGAAA+TGG | 0.416643 | 3_3:-76912117 | None:intergenic |
| CAGTTCAATGGGATTGATCA+TGG | 0.417979 | 3_3:+76914987 | Msa0474090:CDS |
| ATGGATTCGTAATGACGGTT+TGG | 0.422019 | 3_3:-76912128 | None:intergenic |
| GTTAATTGTTGACGAAATGT+TGG | 0.426568 | 3_3:-76915030 | None:intergenic |
| CATAAAGATGTGGTAAAAGC+TGG | 0.429728 | 3_3:-76913421 | None:intergenic |
| GGCGTCAACGACCCAAATCT+TGG | 0.432825 | 3_3:+76912048 | Msa0474090:CDS |
| AAACACACCCCAGAAGTATT+CGG | 0.436981 | 3_3:+76908786 | Msa0474090:five_prime_UTR |
| TTAACTCCATGGAAATCATT+GGG | 0.437074 | 3_3:-76912474 | None:intergenic |
| TTACCTAGATGTTGAAGAAT+GGG | 0.437722 | 3_3:+76912512 | Msa0474090:CDS |
| GCTGAAGAATTACAGTTCAA+TGG | 0.439537 | 3_3:+76914975 | Msa0474090:intron |
| CTGAAGAATTACAGTTCAAT+GGG | 0.441005 | 3_3:+76914976 | Msa0474090:CDS |
| AATCCCATTCTTCAACATCT+AGG | 0.445601 | 3_3:-76912515 | None:intergenic |
| TGGCCGCGCTCTTGCTCGTA+TGG | 0.446929 | 3_3:+76912091 | Msa0474090:CDS |
| ATATGTTGCCGAATACTTCT+GGG | 0.449452 | 3_3:-76908794 | None:intergenic |
| CTTACCTAGATGTTGAAGAA+TGG | 0.457923 | 3_3:+76912511 | Msa0474090:CDS |
| CCGCTGCCTCTTTCCGGCAG+CGG | 0.461632 | 3_3:+76908841 | Msa0474090:five_prime_UTR |
| TGACGCCTTCTTGGCTTTCG+AGG | 0.467184 | 3_3:-76912032 | None:intergenic |
| CCAAATGGGGAGAATATAAT+GGG | 0.469210 | 3_3:-76912071 | None:intergenic |
| TATCAGCAATGCCCTTCTCT+TGG | 0.475701 | 3_3:-76913322 | None:intergenic |
| CAAATAGGTTGCGCCGCTGC+CGG | 0.476002 | 3_3:-76908854 | None:intergenic |
| CATCTAGGTAAGTTTGCAGC+AGG | 0.476506 | 3_3:-76912500 | None:intergenic |
| CGTCTTACTAGTAGAGGAAA+GGG | 0.484380 | 3_3:-76912162 | None:intergenic |
| GCTTAAACTGGAAGGAAGTC+CGG | 0.491473 | 3_3:-76913612 | None:intergenic |
| ACATTCACTCTCCATTTCAC+TGG | 0.495073 | 3_3:-76915409 | None:intergenic |
| ATTATCATTGCAAAATAGAA+AGG | 0.496366 | 3_3:-76915217 | None:intergenic |
| AATTCTTAGCAAAATTTACA+AGG | 0.497613 | 3_3:+76913642 | Msa0474090:CDS |
| TGGCTTCAACAAGCACACTT+TGG | 0.512805 | 3_3:+76912294 | Msa0474090:CDS |
| ATAAAGATGTGGTAAAAGCT+GGG | 0.518331 | 3_3:-76913420 | None:intergenic |
| GTTGCGCCGCTGCCGGAAAG+AGG | 0.520269 | 3_3:-76908847 | None:intergenic |
| GTGGTAAAAGCTGGGGAGGA+AGG | 0.522221 | 3_3:-76913412 | None:intergenic |
| AACAGCCAACAGAGGACCTC+CGG | 0.530393 | 3_3:+76913593 | Msa0474090:intron |
| CCGCTGCCGGAAAGAGGCAG+CGG | 0.531897 | 3_3:-76908841 | None:intergenic |
| GAATTTCTCCTCCTTAAAGC+AGG | 0.534707 | 3_3:+76913299 | Msa0474090:CDS |
| CCTAAACCCAATGATTTCCA+TGG | 0.540138 | 3_3:+76912468 | Msa0474090:CDS |
| GAGGTCGAAGTGAACGATGA+AGG | 0.541679 | 3_3:-76908921 | None:intergenic |
| TTACTAGTAGAGGAAAGGGT+AGG | 0.545836 | 3_3:-76912158 | None:intergenic |
| TCTGTGGTGTTCAGCGCTCA+CGG | 0.548779 | 3_3:+76908889 | Msa0474090:five_prime_UTR |
| GCGTCTTACTAGTAGAGGAA+AGG | 0.553247 | 3_3:-76912163 | None:intergenic |
| TCTCTTGGCCTGCTTTAAGG+AGG | 0.553910 | 3_3:-76913307 | None:intergenic |
| CTTTAATAAATGAAGGCTGA+AGG | 0.554231 | 3_3:+76915055 | Msa0474090:three_prime_UTR |
| CACTGTAGGGACTGTTGTGA+AGG | 0.561683 | 3_3:+76912572 | Msa0474090:CDS |
| GTAGAGGATGATGAGGACGA+AGG | 0.562570 | 3_3:+76912594 | Msa0474090:CDS |
| TATATAATGCTTAAACTGGA+AGG | 0.563473 | 3_3:-76913620 | None:intergenic |
| AAGGGTCAGAGTCATCTGAC+GGG | 0.567670 | 3_3:+76912329 | Msa0474090:CDS |
| AGATGTGGTAAAAGCTGGGG+AGG | 0.569543 | 3_3:-76913416 | None:intergenic |
| AAATGCCTCGAAAGCCAAGA+AGG | 0.571167 | 3_3:+76912027 | Msa0474090:exon |
| AAAAGGCGTCTTACTAGTAG+AGG | 0.571577 | 3_3:-76912168 | None:intergenic |
| CCTTAAAGCAGGCCAAGAGA+AGG | 0.574068 | 3_3:+76913310 | Msa0474090:CDS |
| GCAGCAGGGTCTTAACTCCA+TGG | 0.576405 | 3_3:-76912485 | None:intergenic |
| AGCAAGAGCGCGGCCAAATG+GGG | 0.577789 | 3_3:-76912084 | None:intergenic |
| CTTAAAGCAGGCCAAGAGAA+GGG | 0.581387 | 3_3:+76913311 | Msa0474090:CDS |
| TTACCGCTCTTAATTTATGG+AGG | 0.583198 | 3_3:+76912631 | Msa0474090:CDS |
| ACTTAGTACGTCCTCACCGC+AGG | 0.584902 | 3_3:+76908956 | Msa0474090:five_prime_UTR |
| TACTAGTAGAGGAAAGGGTA+GGG | 0.587803 | 3_3:-76912157 | None:intergenic |
| GAAGTCCGGAGGTCCTCTGT+TGG | 0.590024 | 3_3:-76913598 | None:intergenic |
| TTTGGCAATTTAACACTCTG+TGG | 0.591459 | 3_3:+76908873 | Msa0474090:five_prime_UTR |
| GTCGAAGTGAACGATGAAGG+TGG | 0.595763 | 3_3:-76908918 | None:intergenic |
| GAAGGGTCAGAGTCATCTGA+CGG | 0.599996 | 3_3:+76912328 | Msa0474090:CDS |
| GTCATGGGCCACAGAAGATG+AGG | 0.600540 | 3_3:+76913463 | Msa0474090:CDS |
| ACTGAGCGATGATAGTGAAG+AGG | 0.609208 | 3_3:+76913837 | Msa0474090:CDS |
| AAAAGAGAATCATAAAGATG+TGG | 0.615325 | 3_3:-76913431 | None:intergenic |
| CGGAAGCTATTGGAAGTACA+CGG | 0.616719 | 3_3:-76908821 | None:intergenic |
| TCGAAGTGAACGATGAAGGT+GGG | 0.619580 | 3_3:-76908917 | None:intergenic |
| ACATCTCACCTCATCTTCTG+TGG | 0.620207 | 3_3:-76913471 | None:intergenic |
| TCGCAATGGATTCGTAATGA+CGG | 0.622074 | 3_3:-76912133 | None:intergenic |
| GAAGGCTGAAGGCAACCAGA+AGG | 0.624926 | 3_3:+76915066 | Msa0474090:three_prime_UTR |
| ACTTTGGAAGAAAGACCTGA+AGG | 0.627107 | 3_3:+76912310 | Msa0474090:CDS |
| GGGATTGATCATGGATGTTG+AGG | 0.628988 | 3_3:+76914996 | Msa0474090:CDS |
| AAGTGAACGATGAAGGTGGG+TGG | 0.639561 | 3_3:-76908914 | None:intergenic |
| TCTTCTGGTATCACAGCGTG+TGG | 0.641776 | 3_3:+76913385 | Msa0474090:CDS |
| GGAAAGGGTAGGGTTCGCAA+TGG | 0.644789 | 3_3:-76912147 | None:intergenic |
| ATGCCATACGAGCAAGAGCG+CGG | 0.646129 | 3_3:-76912094 | None:intergenic |
| TAAAGATGTGGTAAAAGCTG+GGG | 0.646135 | 3_3:-76913419 | None:intergenic |
| AGGGACTGTTGTGAAGGTAG+AGG | 0.647189 | 3_3:+76912578 | Msa0474090:CDS |
| CGTACTAAGTGTGAGGCGAA+CGG | 0.647865 | 3_3:-76908943 | None:intergenic |
| CTTTGGAAGAAAGACCTGAA+GGG | 0.652042 | 3_3:+76912311 | Msa0474090:CDS |
| ATCTAGGTAAGTTTGCAGCA+GGG | 0.655089 | 3_3:-76912499 | None:intergenic |
| GTTGAAGAATGGGATTTGAG+TGG | 0.660162 | 3_3:+76912522 | Msa0474090:CDS |
| AAAAGTGTACAAACTAACAA+CGG | 0.665640 | 3_3:-76915268 | None:intergenic |
| GTGAGGACGTACTAAGTGTG+AGG | 0.668125 | 3_3:-76908950 | None:intergenic |
| TATGTTGCCGAATACTTCTG+GGG | 0.673877 | 3_3:-76908793 | None:intergenic |
| AATAGTATATGTTAAGCCCG+AGG | 0.680431 | 3_3:+76913861 | Msa0474090:CDS |
| GCACACTTAACAGCCAACAG+AGG | 0.683392 | 3_3:+76913585 | Msa0474090:intron |
| ACTAAGTGTGAGGCGAACGG+AGG | 0.694204 | 3_3:-76908940 | None:intergenic |
| ATACCTCCATAAATTAAGAG+CGG | 0.696195 | 3_3:-76912634 | None:intergenic |
| TGTGAAGGTAGAGGATGATG+AGG | 0.709733 | 3_3:+76912587 | Msa0474090:CDS |
| AGGGTCAGAGTCATCTGACG+GGG | 0.709794 | 3_3:+76912330 | Msa0474090:CDS |
| GAAAGGAAATACCTGCGGTG+AGG | 0.711295 | 3_3:-76908967 | None:intergenic |
| AGTGTACAAACTAACAACGG+AGG | 0.712430 | 3_3:-76915265 | None:intergenic |
| CTTCACAACAGTCCCTACAG+TGG | 0.715752 | 3_3:-76912571 | None:intergenic |
| TAAACTGGAAGGAAGTCCGG+AGG | 0.716607 | 3_3:-76913609 | None:intergenic |
| GGGGAACAAGCACACCACGT+AGG | 0.744491 | 3_3:+76913362 | Msa0474090:CDS |
| GTGATACCAGAAGACCTACG+TGG | 0.802514 | 3_3:-76913376 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATGTTTATAGAAATTTT+GGG | - | chr3_3:76909305-76909324 | None:intergenic | 10.0% |
| !! | AAGAAAAAAATTATAATATG+GGG | + | chr3_3:76911501-76911520 | Msa0474090:intron | 10.0% |
| !! | TATAAAATCTATTTATTTGT+GGG | - | chr3_3:76911537-76911556 | None:intergenic | 10.0% |
| !!! | AAATAAATAGATTTTATAGT+GGG | + | chr3_3:76911539-76911558 | Msa0474090:intron | 10.0% |
| !!! | ATAATTTTCTTAAATTACTA+CGG | - | chr3_3:76911687-76911706 | None:intergenic | 10.0% |
| !! | TTAAATTATAAAAGAGAAAA+AGG | - | chr3_3:76912188-76912207 | None:intergenic | 10.0% |
| !!! | TTATTTTTTATTTGTAAGTT+TGG | + | chr3_3:76913179-76913198 | Msa0474090:intron | 10.0% |
| !!! | TTTAAAATTATTAATCTAGA+AGG | + | chr3_3:76914854-76914873 | Msa0474090:intron | 10.0% |
| !!! | AAATGTTTATAGAAATTTTG+GGG | - | chr3_3:76909304-76909323 | None:intergenic | 15.0% |
| !!! | GAAAATGTTTATAGAAATTT+TGG | - | chr3_3:76909306-76909325 | None:intergenic | 15.0% |
| !!! | GTTGTTTTTTAAAATGAAAT+CGG | - | chr3_3:76911407-76911426 | None:intergenic | 15.0% |
| !! | CTATAAAATCTATTTATTTG+TGG | - | chr3_3:76911538-76911557 | None:intergenic | 15.0% |
| !!! | CAAATAAATAGATTTTATAG+TGG | + | chr3_3:76911538-76911557 | Msa0474090:intron | 15.0% |
| !! | TAATTGAAAAGAATTATTTG+GGG | - | chr3_3:76911570-76911589 | None:intergenic | 15.0% |
| !! | CTAATTGAAAAGAATTATTT+GGG | - | chr3_3:76911571-76911590 | None:intergenic | 15.0% |
| !!! | CAAATAATTCTTTTCAATTA+GGG | + | chr3_3:76911570-76911589 | Msa0474090:intron | 15.0% |
| !!! | AAATAATTCTTTTCAATTAG+GGG | + | chr3_3:76911571-76911590 | Msa0474090:intron | 15.0% |
| !! | TTTCATATTCAAGAAAAAAA+AGG | + | chr3_3:76912891-76912910 | Msa0474090:intron | 15.0% |
| !!! | ATTTTTTTCTTTAATGTCTT+TGG | + | chr3_3:76912970-76912989 | Msa0474090:intron | 15.0% |
| !! | TCTCAAATAAAATATGTATT+TGG | - | chr3_3:76913207-76913226 | None:intergenic | 15.0% |
| !!! | ATTGTTATTTTTAGCTTTTA+TGG | + | chr3_3:76913711-76913730 | Msa0474090:intron | 15.0% |
| !! | ACTAAAATTAAGCAAATTAA+CGG | - | chr3_3:76914700-76914719 | None:intergenic | 15.0% |
| !! | ATCAATTATTCTGAATTATA+CGG | + | chr3_3:76914937-76914956 | Msa0474090:intron | 15.0% |
| !! | TTAACTTCTTTAATAAATGA+AGG | + | chr3_3:76915048-76915067 | Msa0474090:three_prime_UTR | 15.0% |
| !!! | ATTTTAAAAATCCCAAATTT+TGG | - | chr3_3:76915186-76915205 | None:intergenic | 15.0% |
| !! | ACTTATGATCAAACTAATTA+GGG | - | chr3_3:76909151-76909170 | None:intergenic | 20.0% |
| !! | TACTTATGATCAAACTAATT+AGG | - | chr3_3:76909152-76909171 | None:intergenic | 20.0% |
| !! | TAAAAATCCACAAGATTAAA+AGG | + | chr3_3:76909231-76909250 | Msa0474090:intron | 20.0% |
| !! | CCTAATTGAAAAGAATTATT+TGG | - | chr3_3:76911572-76911591 | None:intergenic | 20.0% |
| !!! | CCAAATAATTCTTTTCAATT+AGG | + | chr3_3:76911569-76911588 | Msa0474090:intron | 20.0% |
| !!! | AATAATTCTTTTCAATTAGG+GGG | + | chr3_3:76911572-76911591 | Msa0474090:intron | 20.0% |
| !! | TGTTAATTTCTTATGATTAG+AGG | - | chr3_3:76911664-76911683 | None:intergenic | 20.0% |
| !! | TGTAAGACATAAAACATAAA+AGG | - | chr3_3:76912238-76912257 | None:intergenic | 20.0% |
| !! | AAGTAAAATTGATTGATACA+AGG | + | chr3_3:76912397-76912416 | Msa0474090:intron | 20.0% |
| !! | TATTACATTAGAAAAGAAAG+AGG | - | chr3_3:76912710-76912729 | None:intergenic | 20.0% |
| !!! | TACACATATGATTACTATTT+TGG | - | chr3_3:76912870-76912889 | None:intergenic | 20.0% |
| !! | AAGGAATTTGTATATTTGTA+TGG | + | chr3_3:76912910-76912929 | Msa0474090:intron | 20.0% |
| !! | AGGAATTTGTATATTTGTAT+GGG | + | chr3_3:76912911-76912930 | Msa0474090:intron | 20.0% |
| !! | GTTATCTACAACAATTTATA+AGG | + | chr3_3:76913156-76913175 | Msa0474090:intron | 20.0% |
| !!! | TGATAAGTTGATATTACTTT+TGG | + | chr3_3:76913340-76913359 | Msa0474090:CDS | 20.0% |
| !!! | GATAAGTTGATATTACTTTT+GGG | + | chr3_3:76913341-76913360 | Msa0474090:CDS | 20.0% |
| !!! | ATAAGTTGATATTACTTTTG+GGG | + | chr3_3:76913342-76913361 | Msa0474090:CDS | 20.0% |
| !! | GAATTATATAATGCTTAAAC+TGG | - | chr3_3:76913627-76913646 | None:intergenic | 20.0% |
| !! | AATTCTTAGCAAAATTTACA+AGG | + | chr3_3:76913642-76913661 | Msa0474090:CDS | 20.0% |
| !! | ATAAGAGAACAACAATAAAT+AGG | - | chr3_3:76913693-76913712 | None:intergenic | 20.0% |
| !! | ATGTTACAAAACAACAAAAA+TGG | - | chr3_3:76913758-76913777 | None:intergenic | 20.0% |
| !! | GACAAAATAATTCAAAATGA+TGG | - | chr3_3:76913922-76913941 | None:intergenic | 20.0% |
| !!! | TGTAATAAGAGAAGTTTTAT+AGG | + | chr3_3:76914306-76914325 | Msa0474090:intron | 20.0% |
| !! | AAAAATAAAACTCTATTCAG+TGG | - | chr3_3:76914604-76914623 | None:intergenic | 20.0% |
| !!! | AGTTTTATTTTTAGTACCAT+GGG | + | chr3_3:76914612-76914631 | Msa0474090:intron | 20.0% |
| !! | CTAAAATTAAGCAAATTAAC+GGG | - | chr3_3:76914699-76914718 | None:intergenic | 20.0% |
| !!! | GGATTTTTAAAATTAAACTC+TGG | + | chr3_3:76915193-76915212 | Msa0474090:three_prime_UTR | 20.0% |
| !! | ATTATCATTGCAAAATAGAA+AGG | - | chr3_3:76915220-76915239 | None:intergenic | 20.0% |
| !!! | TTCTATTTTGCAATGATAAT+TGG | + | chr3_3:76915220-76915239 | Msa0474090:three_prime_UTR | 20.0% |
| !!! | TTTTATGCTTTTTACCATGA+AGG | + | chr3_3:76908995-76909014 | Msa0474090:intron | 25.0% |
| !! | ATTAGTTTGATCATAAGTAG+AGG | + | chr3_3:76909153-76909172 | Msa0474090:intron | 25.0% |
| !!! | TTATAATATGGGGCTTTATT+AGG | + | chr3_3:76911511-76911530 | Msa0474090:intron | 25.0% |
| ! | GACAGTACAAATATAATCAA+TGG | - | chr3_3:76911801-76911820 | None:intergenic | 25.0% |
| ! | AGCTGAAAATGCAAAATAAT+AGG | - | chr3_3:76911907-76911926 | None:intergenic | 25.0% |
| !! | TCTTAATTTATGGAGGTATA+GGG | + | chr3_3:76912638-76912657 | Msa0474090:CDS | 25.0% |
| !!! | ATATGATTACTATTTTGGTG+GGG | - | chr3_3:76912865-76912884 | None:intergenic | 25.0% |
| !!! | CATATGATTACTATTTTGGT+GGG | - | chr3_3:76912866-76912885 | None:intergenic | 25.0% |
| !!! | ACATATGATTACTATTTTGG+TGG | - | chr3_3:76912867-76912886 | None:intergenic | 25.0% |
| ! | GAATAAGAATGAATTGATCA+AGG | - | chr3_3:76912942-76912961 | None:intergenic | 25.0% |
| !! | CAAAATTTTCAAATTGTTGC+TGG | - | chr3_3:76913011-76913030 | None:intergenic | 25.0% |
| !!! | TTGAAAATTTTGTTTGTGAC+TGG | + | chr3_3:76913019-76913038 | Msa0474090:intron | 25.0% |
| !! | AAAGCTTCTAAAAAAGTTGA+CGG | - | chr3_3:76913122-76913141 | None:intergenic | 25.0% |
| !!! | TAAGTTGATATTACTTTTGG+GGG | + | chr3_3:76913343-76913362 | Msa0474090:CDS | 25.0% |
| ! | AAAAGAGAATCATAAAGATG+TGG | - | chr3_3:76913434-76913453 | None:intergenic | 25.0% |
| !!! | TCTTTTTAATGAAGTGTCAT+GGG | + | chr3_3:76913448-76913467 | Msa0474090:CDS | 25.0% |
| ! | TATATAATGCTTAAACTGGA+AGG | - | chr3_3:76913623-76913642 | None:intergenic | 25.0% |
| !! | GTAACATTTTACTTCATTTC+TGG | + | chr3_3:76913771-76913790 | Msa0474090:intron | 25.0% |
| !! | AGCTTAACTGGAAATTATTT+TGG | - | chr3_3:76913964-76913983 | None:intergenic | 25.0% |
| !!! | CTCTTTTTTGGTTTAATTGA+TGG | + | chr3_3:76914042-76914061 | Msa0474090:intron | 25.0% |
| ! | GTTAACCATGCAATATTTAT+AGG | + | chr3_3:76914328-76914347 | Msa0474090:intron | 25.0% |
| !!! | GAGTTTTATTTTTAGTACCA+TGG | + | chr3_3:76914611-76914630 | Msa0474090:intron | 25.0% |
| ! | TTTAACCTACAAAAAGAGAT+AGG | + | chr3_3:76914816-76914835 | Msa0474090:intron | 25.0% |
| !! | ATATTATCCGATTTGTAGAA+TGG | + | chr3_3:76914897-76914916 | Msa0474090:intron | 25.0% |
| !! | TATTATCCGATTTGTAGAAT+GGG | + | chr3_3:76914898-76914917 | Msa0474090:intron | 25.0% |
| ! | TTTATGTTAATGAATTGTCC+AGG | - | chr3_3:76915099-76915118 | None:intergenic | 25.0% |
| !!! | TGATTTAATTTTTTTCCTGC+AGG | + | chr3_3:76915149-76915168 | Msa0474090:intron | 25.0% |
| !! | AAAAGTGTACAAACTAACAA+CGG | - | chr3_3:76915271-76915290 | None:intergenic | 25.0% |
| ! | AAGAGATAGAGAATATGAAT+TGG | + | chr3_3:76915356-76915375 | Msa0474090:three_prime_UTR | 25.0% |
| ! | AGAGTGTTAAATTGCCAAAT+AGG | - | chr3_3:76908872-76908891 | None:intergenic | 30.0% |
| ! | AAAAGCATAAAACAGAGGAA+AGG | - | chr3_3:76908987-76909006 | None:intergenic | 30.0% |
| ! | TGGTAAAAAGCATAAAACAG+AGG | - | chr3_3:76908992-76909011 | None:intergenic | 30.0% |
| ! | CTTTTTACCATGAAGGTTTA+CGG | + | chr3_3:76909002-76909021 | Msa0474090:intron | 30.0% |
| TAGAATCAGTTATGCTACTA+TGG | - | chr3_3:76909061-76909080 | None:intergenic | 30.0% | |
| TTAGGGAGGAAATAAACTTT+AGG | - | chr3_3:76909134-76909153 | None:intergenic | 30.0% | |
| TATGATCAAACTAATTAGGG+AGG | - | chr3_3:76909148-76909167 | None:intergenic | 30.0% | |
| !!! | TTATAGAAATTTTGGGGCTT+GGG | - | chr3_3:76909298-76909317 | None:intergenic | 30.0% |
| !!! | TTTATAGAAATTTTGGGGCT+TGG | - | chr3_3:76909299-76909318 | None:intergenic | 30.0% |
| AACAGCTTATTTGTGCAAAA+CGG | + | chr3_3:76909575-76909594 | Msa0474090:intron | 30.0% | |
| !!! | AATAGATTTTATAGTGGGCT+TGG | + | chr3_3:76911544-76911563 | Msa0474090:intron | 30.0% |
| !! | TTTAAGTGGGCTTTGAAATT+TGG | + | chr3_3:76911625-76911644 | Msa0474090:intron | 30.0% |
| !! | TTAAGTGGGCTTTGAAATTT+GGG | + | chr3_3:76911626-76911645 | Msa0474090:intron | 30.0% |
| ATGGACACATTTCAAAATTG+TGG | - | chr3_3:76911782-76911801 | None:intergenic | 30.0% | |
| CATTTCGAAAACACTGAAAA+TGG | - | chr3_3:76912012-76912031 | None:intergenic | 30.0% | |
| !! | AATATAATGGGCCAAGATTT+GGG | - | chr3_3:76912062-76912081 | None:intergenic | 30.0% |
| !! | ATAAAAGGCACTTAAAAGCA+TGG | - | chr3_3:76912223-76912242 | None:intergenic | 30.0% |
| ! | ATTGGGTTTAGGATCAAAAA+AGG | - | chr3_3:76912460-76912479 | None:intergenic | 30.0% |
| TTAACTCCATGGAAATCATT+GGG | - | chr3_3:76912477-76912496 | None:intergenic | 30.0% | |
| TTACCTAGATGTTGAAGAAT+GGG | + | chr3_3:76912512-76912531 | Msa0474090:CDS | 30.0% | |
| TTGTTACCGCTCTTAATTTA+TGG | + | chr3_3:76912628-76912647 | Msa0474090:CDS | 30.0% | |
| ATACCTCCATAAATTAAGAG+CGG | - | chr3_3:76912637-76912656 | None:intergenic | 30.0% | |
| ! | CTCTTAATTTATGGAGGTAT+AGG | + | chr3_3:76912637-76912656 | Msa0474090:CDS | 30.0% |
| GGTAGATGTTAATTCAACTT+AGG | - | chr3_3:76913100-76913119 | None:intergenic | 30.0% | |
| ! | AAGCTTCTAAAAAAGTTGAC+GGG | - | chr3_3:76913121-76913140 | None:intergenic | 30.0% |
| !! | CTCAAATTAGATTAGCTTCA+AGG | - | chr3_3:76913234-76913253 | None:intergenic | 30.0% |
| !!! | TGAGCCTTTAAAATTTTGCT+AGG | + | chr3_3:76913250-76913269 | Msa0474090:intron | 30.0% |
| ! | TGCTCCTAGCAAAATTTTAA+AGG | - | chr3_3:76913257-76913276 | None:intergenic | 30.0% |
| ! | TAAAATTTTGCTAGGAGCAA+AGG | + | chr3_3:76913258-76913277 | Msa0474090:intron | 30.0% |
| AAGGTGTATTATGAAACTCA+AGG | + | chr3_3:76913277-76913296 | Msa0474090:intron | 30.0% | |
| ATAAAGATGTGGTAAAAGCT+GGG | - | chr3_3:76913423-76913442 | None:intergenic | 30.0% | |
| !! | CTCTTTTTAATGAAGTGTCA+TGG | + | chr3_3:76913447-76913466 | Msa0474090:CDS | 30.0% |
| !! | AGATGTTGATAGTATCAGAT+GGG | + | chr3_3:76913488-76913507 | Msa0474090:intron | 30.0% |
| GAGAACAACAATAAATAGGA+AGG | - | chr3_3:76913689-76913708 | None:intergenic | 30.0% | |
| TTGTGAAAAAAGTTCATCCT+CGG | - | chr3_3:76913881-76913900 | None:intergenic | 30.0% | |
| ACAGACCTATAAATATTGCA+TGG | - | chr3_3:76914336-76914355 | None:intergenic | 30.0% | |
| AATAAAACTCTATTCAGTGG+CGG | - | chr3_3:76914601-76914620 | None:intergenic | 30.0% | |
| TGAAAGAGTCTGTTACATTA+AGG | + | chr3_3:76914734-76914753 | Msa0474090:intron | 30.0% | |
| TAAGGATTAGATATGAACTC+TGG | + | chr3_3:76914752-76914771 | Msa0474090:intron | 30.0% | |
| ! | TCTTTTTGTAGGTTAAAGCA+CGG | - | chr3_3:76914813-76914832 | None:intergenic | 30.0% |
| ! | CTATTCCTATCTCTTTTTGT+AGG | - | chr3_3:76914824-76914843 | None:intergenic | 30.0% |
| CTACAAAAAGAGATAGGAAT+AGG | + | chr3_3:76914822-76914841 | Msa0474090:intron | 30.0% | |
| ! | ATTATCCGATTTGTAGAATG+GGG | + | chr3_3:76914899-76914918 | Msa0474090:intron | 30.0% |
| CTGAAGAATTACAGTTCAAT+GGG | + | chr3_3:76914976-76914995 | Msa0474090:CDS | 30.0% | |
| GTTAATTGTTGACGAAATGT+TGG | - | chr3_3:76915033-76915052 | None:intergenic | 30.0% | |
| CTTTAATAAATGAAGGCTGA+AGG | + | chr3_3:76915055-76915074 | Msa0474090:three_prime_UTR | 30.0% | |
| ! | TGTTTGAGATGCCAAAATTT+GGG | + | chr3_3:76915172-76915191 | Msa0474090:three_prime_UTR | 30.0% |
| !!! | TGTTAGTTTGTACACTTTTC+TGG | + | chr3_3:76915272-76915291 | Msa0474090:three_prime_UTR | 30.0% |
| !!! | GTTAGTTTGTACACTTTTCT+GGG | + | chr3_3:76915273-76915292 | Msa0474090:three_prime_UTR | 30.0% |
| ! | TTTCTGGGTTTCTCAATTTT+TGG | + | chr3_3:76915288-76915307 | Msa0474090:three_prime_UTR | 30.0% |
| TGAAAAAGTTTCCAGTGAAA+TGG | + | chr3_3:76915398-76915417 | Msa0474090:three_prime_UTR | 30.0% | |
| ATATGTTGCCGAATACTTCT+GGG | - | chr3_3:76908797-76908816 | None:intergenic | 35.0% | |
| AATATGTTGCCGAATACTTC+TGG | - | chr3_3:76908798-76908817 | None:intergenic | 35.0% | |
| TTTGGCAATTTAACACTCTG+TGG | + | chr3_3:76908873-76908892 | Msa0474090:five_prime_UTR | 35.0% | |
| ! | ACTTTAGGTATCGCGAATTA+AGG | - | chr3_3:76909119-76909138 | None:intergenic | 35.0% |
| !! | AAGTAGAGGTGTCAATATCA+TGG | + | chr3_3:76909167-76909186 | Msa0474090:intron | 35.0% |
| !! | AGTAGAGGTGTCAATATCAT+GGG | + | chr3_3:76909168-76909187 | Msa0474090:intron | 35.0% |
| TTTAAGCCCCATTACTATGT+GGG | - | chr3_3:76909215-76909234 | None:intergenic | 35.0% | |
| ! | TTTTAAGCCCCATTACTATG+TGG | - | chr3_3:76909216-76909235 | None:intergenic | 35.0% |
| !!! | TATAGAAATTTTGGGGCTTG+GGG | - | chr3_3:76909297-76909316 | None:intergenic | 35.0% |
| ! | ATTAGGGGGCTTTAATTTAG+TGG | + | chr3_3:76911586-76911605 | Msa0474090:intron | 35.0% |
| ! | TTAGGGGGCTTTAATTTAGT+GGG | + | chr3_3:76911587-76911606 | Msa0474090:intron | 35.0% |
| !! | TTTAATTTAGTGGGCTTGGT+GGG | + | chr3_3:76911596-76911615 | Msa0474090:intron | 35.0% |
| !! | TAAGTGGGCTTTGAAATTTG+GGG | + | chr3_3:76911627-76911646 | Msa0474090:intron | 35.0% |
| !! | GAATATAATGGGCCAAGATT+TGG | - | chr3_3:76912063-76912082 | None:intergenic | 35.0% |
| CCAAATGGGGAGAATATAAT+GGG | - | chr3_3:76912074-76912093 | None:intergenic | 35.0% | |
| CAAAAAAGGCAAAATCAGCT+TGG | - | chr3_3:76912446-76912465 | None:intergenic | 35.0% | |
| CTTAACTCCATGGAAATCAT+TGG | - | chr3_3:76912478-76912497 | None:intergenic | 35.0% | |
| CTTACCTAGATGTTGAAGAA+TGG | + | chr3_3:76912511-76912530 | Msa0474090:CDS | 35.0% | |
| AATCCCATTCTTCAACATCT+AGG | - | chr3_3:76912518-76912537 | None:intergenic | 35.0% | |
| TTACCGCTCTTAATTTATGG+AGG | + | chr3_3:76912631-76912650 | Msa0474090:CDS | 35.0% | |
| TCACTAGTAAACTTGCACAA+GGG | - | chr3_3:76912821-76912840 | None:intergenic | 35.0% | |
| ! | GTCTTTGGTTCATTGAATAG+TGG | + | chr3_3:76912985-76913004 | Msa0474090:intron | 35.0% |
| GATGTTAATTCAACTTAGGC+AGG | - | chr3_3:76913096-76913115 | None:intergenic | 35.0% | |
| TAAAGATGTGGTAAAAGCTG+GGG | - | chr3_3:76913422-76913441 | None:intergenic | 35.0% | |
| CATAAAGATGTGGTAAAAGC+TGG | - | chr3_3:76913424-76913443 | None:intergenic | 35.0% | |
| !! | GAGATGTTGATAGTATCAGA+TGG | + | chr3_3:76913487-76913506 | Msa0474090:intron | 35.0% |
| ! | ATGTTTTTCTGTTTGACTGC+TGG | + | chr3_3:76913524-76913543 | Msa0474090:intron | 35.0% |
| AATAGTATATGTTAAGCCCG+AGG | + | chr3_3:76913861-76913880 | Msa0474090:CDS | 35.0% | |
| TGTGAAAAAAGTTCATCCTC+GGG | - | chr3_3:76913880-76913899 | None:intergenic | 35.0% | |
| !!! | GAGGATGAACTTTTTTCACA+AGG | + | chr3_3:76913880-76913899 | Msa0474090:CDS | 35.0% |
| ATAATTTCCAGTTAAGCTCG+TGG | + | chr3_3:76913966-76913985 | Msa0474090:intron | 35.0% | |
| !!! | TGAGGCAAGTTACTCTTTTT+TGG | + | chr3_3:76914030-76914049 | Msa0474090:intron | 35.0% |
| ! | TTTATTTCTCAAACGAGCAG+AGG | - | chr3_3:76914096-76914115 | None:intergenic | 35.0% |
| ! | TTCTTTTGATCTTTGCCATG+TGG | + | chr3_3:76914135-76914154 | Msa0474090:intron | 35.0% |
| ATGAGTCATTGCTAACTTTG+TGG | - | chr3_3:76914520-76914539 | None:intergenic | 35.0% | |
| GCTGAAGAATTACAGTTCAA+TGG | + | chr3_3:76914975-76914994 | Msa0474090:intron | 35.0% | |
| ! | GTGTTTGAGATGCCAAAATT+TGG | + | chr3_3:76915171-76915190 | Msa0474090:three_prime_UTR | 35.0% |
| !! | AAACACACCCCAGAAGTATT+CGG | + | chr3_3:76908786-76908805 | Msa0474090:five_prime_UTR | 40.0% |
| TATGTTGCCGAATACTTCTG+GGG | - | chr3_3:76908796-76908815 | None:intergenic | 40.0% | |
| TTTACCATGAAGGTTTACGG+TGG | + | chr3_3:76909005-76909024 | Msa0474090:intron | 40.0% | |
| !! | GTAGAGGTGTCAATATCATG+GGG | + | chr3_3:76909169-76909188 | Msa0474090:intron | 40.0% |
| ! | ATGTGGGCCTTTTAATCTTG+TGG | - | chr3_3:76909241-76909260 | None:intergenic | 40.0% |
| !!! | CTTGAGGGCTTTTGATTTGT+GGG | - | chr3_3:76909273-76909292 | None:intergenic | 40.0% |
| !! | CTTTAATTTAGTGGGCTTGG+TGG | + | chr3_3:76911595-76911614 | Msa0474090:intron | 40.0% |
| !! | TTAATTTAGTGGGCTTGGTG+GGG | + | chr3_3:76911597-76911616 | Msa0474090:intron | 40.0% |
| CCCATTATATTCTCCCCATT+TGG | + | chr3_3:76912071-76912090 | Msa0474090:CDS | 40.0% | |
| GCCAAATGGGGAGAATATAA+TGG | - | chr3_3:76912075-76912094 | None:intergenic | 40.0% | |
| ! | ATGACGGTTTGGCTTAGAAA+TGG | - | chr3_3:76912120-76912139 | None:intergenic | 40.0% |
| ATGGATTCGTAATGACGGTT+TGG | - | chr3_3:76912131-76912150 | None:intergenic | 40.0% | |
| ! | TCGCAATGGATTCGTAATGA+CGG | - | chr3_3:76912136-76912155 | None:intergenic | 40.0% |
| TACTAGTAGAGGAAAGGGTA+GGG | - | chr3_3:76912160-76912179 | None:intergenic | 40.0% | |
| TTACTAGTAGAGGAAAGGGT+AGG | - | chr3_3:76912161-76912180 | None:intergenic | 40.0% | |
| CGTCTTACTAGTAGAGGAAA+GGG | - | chr3_3:76912165-76912184 | None:intergenic | 40.0% | |
| !! | AAAAGGCGTCTTACTAGTAG+AGG | - | chr3_3:76912171-76912190 | None:intergenic | 40.0% |
| ! | ACTTTGGAAGAAAGACCTGA+AGG | + | chr3_3:76912310-76912329 | Msa0474090:CDS | 40.0% |
| ! | CTTTGGAAGAAAGACCTGAA+GGG | + | chr3_3:76912311-76912330 | Msa0474090:CDS | 40.0% |
| !! | TACAAGGTCTCTGTTGTTTC+AGG | + | chr3_3:76912413-76912432 | Msa0474090:intron | 40.0% |
| !! | ACAAGGTCTCTGTTGTTTCA+GGG | + | chr3_3:76912414-76912433 | Msa0474090:intron | 40.0% |
| CCATGGAAATCATTGGGTTT+AGG | - | chr3_3:76912471-76912490 | None:intergenic | 40.0% | |
| CCTAAACCCAATGATTTCCA+TGG | + | chr3_3:76912468-76912487 | Msa0474090:CDS | 40.0% | |
| ATCTAGGTAAGTTTGCAGCA+GGG | - | chr3_3:76912502-76912521 | None:intergenic | 40.0% | |
| GTTGAAGAATGGGATTTGAG+TGG | + | chr3_3:76912522-76912541 | Msa0474090:CDS | 40.0% | |
| !! | TGGCTTTGCAGACTTGATTT+TGG | + | chr3_3:76912542-76912561 | Msa0474090:CDS | 40.0% |
| !!! | ATTTTGGAACAGACCACTGT+AGG | + | chr3_3:76912558-76912577 | Msa0474090:CDS | 40.0% |
| !!! | TTTTGGAACAGACCACTGTA+GGG | + | chr3_3:76912559-76912578 | Msa0474090:CDS | 40.0% |
| AAGAAAGAGGCAAACAGATG+AGG | - | chr3_3:76912697-76912716 | None:intergenic | 40.0% | |
| ACTAGTAAACTTGCACAAGG+GGG | - | chr3_3:76912819-76912838 | None:intergenic | 40.0% | |
| CACTAGTAAACTTGCACAAG+GGG | - | chr3_3:76912820-76912839 | None:intergenic | 40.0% | |
| CTCACTAGTAAACTTGCACA+AGG | - | chr3_3:76912822-76912841 | None:intergenic | 40.0% | |
| GAATTTCTCCTCCTTAAAGC+AGG | + | chr3_3:76913299-76913318 | Msa0474090:CDS | 40.0% | |
| ! | TTGATAGTATCAGATGGGTG+AGG | + | chr3_3:76913493-76913512 | Msa0474090:intron | 40.0% |
| TGATAGTATCAGATGGGTGA+GGG | + | chr3_3:76913494-76913513 | Msa0474090:intron | 40.0% | |
| ! | AAAGAGTAACTTGCCTCATG+AGG | - | chr3_3:76914028-76914047 | None:intergenic | 40.0% |
| TTTGCCATGTGGTCTATTTG+TGG | + | chr3_3:76914146-76914165 | Msa0474090:intron | 40.0% | |
| TTGCCATGTGGTCTATTTGT+GGG | + | chr3_3:76914147-76914166 | Msa0474090:intron | 40.0% | |
| TGTGTGCAGGTTATCAGAAA+CGG | - | chr3_3:76914421-76914440 | None:intergenic | 40.0% | |
| ATTGCTAACTTTGTGGCATG+TGG | - | chr3_3:76914513-76914532 | None:intergenic | 40.0% | |
| !! | ATCAGTTAGCCTTTGATCCA+TGG | + | chr3_3:76914555-76914574 | Msa0474090:intron | 40.0% |
| AGCTAATCAAACATGTCCCA+TGG | - | chr3_3:76914631-76914650 | None:intergenic | 40.0% | |
| ACTGCCTTAGAATCACTTCA+GGG | + | chr3_3:76914662-76914681 | Msa0474090:intron | 40.0% | |
| CAAACCCTGAAGTGATTCTA+AGG | - | chr3_3:76914669-76914688 | None:intergenic | 40.0% | |
| !!! | TCTGGCTCTTGTATTTTCTC+TGG | + | chr3_3:76914770-76914789 | Msa0474090:intron | 40.0% |
| TACCACCCCATTCTACAAAT+CGG | - | chr3_3:76914907-76914926 | None:intergenic | 40.0% | |
| CAGTTCAATGGGATTGATCA+TGG | + | chr3_3:76914987-76915006 | Msa0474090:CDS | 40.0% | |
| AGTGTACAAACTAACAACGG+AGG | - | chr3_3:76915268-76915287 | None:intergenic | 40.0% | |
| ACATTCACTCTCCATTTCAC+TGG | - | chr3_3:76915412-76915431 | None:intergenic | 40.0% | |
| ! | CGGAAGCTATTGGAAGTACA+CGG | - | chr3_3:76908824-76908843 | None:intergenic | 45.0% |
| TCGAAGTGAACGATGAAGGT+GGG | - | chr3_3:76908920-76908939 | None:intergenic | 45.0% | |
| CAGAGGAAAGGAAATACCTG+CGG | - | chr3_3:76908975-76908994 | None:intergenic | 45.0% | |
| ACTATGGCTGCAGAACAAGA+TGG | - | chr3_3:76909045-76909064 | None:intergenic | 45.0% | |
| ! | ATCATGGGGCCTTGAAGTTT+TGG | + | chr3_3:76909183-76909202 | Msa0474090:intron | 45.0% |
| TTGTGGGCTTGCATGAATGT+GGG | - | chr3_3:76909257-76909276 | None:intergenic | 45.0% | |
| TTTGTGGGCTTGCATGAATG+TGG | - | chr3_3:76909258-76909277 | None:intergenic | 45.0% | |
| !!! | CCTTGAGGGCTTTTGATTTG+TGG | - | chr3_3:76909274-76909293 | None:intergenic | 45.0% |
| CCACAAATCAAAAGCCCTCA+AGG | + | chr3_3:76909271-76909290 | Msa0474090:intron | 45.0% | |
| !! | GGGCTTTAATTTAGTGGGCT+TGG | + | chr3_3:76911592-76911611 | Msa0474090:intron | 45.0% |
| !! | TAATTTAGTGGGCTTGGTGG+GGG | + | chr3_3:76911598-76911617 | Msa0474090:intron | 45.0% |
| !!! | TTGGTGGGGGCTTTTTTAAG+TGG | + | chr3_3:76911611-76911630 | Msa0474090:intron | 45.0% |
| !!! | TGGTGGGGGCTTTTTTAAGT+GGG | + | chr3_3:76911612-76911631 | Msa0474090:intron | 45.0% |
| AAATGCCTCGAAAGCCAAGA+AGG | + | chr3_3:76912027-76912046 | Msa0474090:exon | 45.0% | |
| GCGTCTTACTAGTAGAGGAA+AGG | - | chr3_3:76912166-76912185 | None:intergenic | 45.0% | |
| CTATTCCTGATCCACTTCCT+AGG | + | chr3_3:76912268-76912287 | Msa0474090:intron | 45.0% | |
| CATTACCTAGGAAGTGGATC+AGG | - | chr3_3:76912276-76912295 | None:intergenic | 45.0% | |
| CTGATCCACTTCCTAGGTAA+TGG | + | chr3_3:76912274-76912293 | Msa0474090:intron | 45.0% | |
| TGAAGCCATTACCTAGGAAG+TGG | - | chr3_3:76912282-76912301 | None:intergenic | 45.0% | |
| ! | GCTTGTTGAAGCCATTACCT+AGG | - | chr3_3:76912288-76912307 | None:intergenic | 45.0% |
| TGGCTTCAACAAGCACACTT+TGG | + | chr3_3:76912294-76912313 | Msa0474090:CDS | 45.0% | |
| CATCTAGGTAAGTTTGCAGC+AGG | - | chr3_3:76912503-76912522 | None:intergenic | 45.0% | |
| TGTGAAGGTAGAGGATGATG+AGG | + | chr3_3:76912587-76912606 | Msa0474090:CDS | 45.0% | |
| AAACTTGCACAAGGGGGAAA+TGG | - | chr3_3:76912813-76912832 | None:intergenic | 45.0% | |
| CTTAAAGCAGGCCAAGAGAA+GGG | + | chr3_3:76913311-76913330 | Msa0474090:CDS | 45.0% | |
| TATCAGCAATGCCCTTCTCT+TGG | - | chr3_3:76913325-76913344 | None:intergenic | 45.0% | |
| ACATCTCACCTCATCTTCTG+TGG | - | chr3_3:76913474-76913493 | None:intergenic | 45.0% | |
| GCTTAAACTGGAAGGAAGTC+CGG | - | chr3_3:76913615-76913634 | None:intergenic | 45.0% | |
| ! | ACTGAGCGATGATAGTGAAG+AGG | + | chr3_3:76913837-76913856 | Msa0474090:CDS | 45.0% |
| TGCCATGTGGTCTATTTGTG+GGG | + | chr3_3:76914148-76914167 | Msa0474090:intron | 45.0% | |
| AACCCCACAAATAGACCACA+TGG | - | chr3_3:76914153-76914172 | None:intergenic | 45.0% | |
| AGTTACACTAACCTGTGCAC+AGG | + | chr3_3:76914387-76914406 | Msa0474090:intron | 45.0% | |
| ! | CGGTTTTTAATCCTGTGCAC+AGG | - | chr3_3:76914401-76914420 | None:intergenic | 45.0% |
| !! | CTGAAGTGATTCTAAGGCAG+TGG | - | chr3_3:76914663-76914682 | None:intergenic | 45.0% |
| CACTGCCTTAGAATCACTTC+AGG | + | chr3_3:76914661-76914680 | Msa0474090:intron | 45.0% | |
| ! | ATCCGATTTGTAGAATGGGG+TGG | + | chr3_3:76914902-76914921 | Msa0474090:intron | 45.0% |
| GGGATTGATCATGGATGTTG+AGG | + | chr3_3:76914996-76915015 | Msa0474090:CDS | 45.0% | |
| CAACCAGAAGGTAATGTTCC+TGG | + | chr3_3:76915078-76915097 | Msa0474090:intron | 45.0% | |
| TGTCCAGGAACATTACCTTC+TGG | - | chr3_3:76915084-76915103 | None:intergenic | 45.0% | |
| !!! | GTTATTTTTTAAAATTAAAT+CGG | - | chr3_3:76910991-76911010 | None:intergenic | 5.0% |
| !!! | GTTATTTTTTAAAATTAAAT+CGG | + | chr3_3:76910991-76911010 | Msa0474090:intron | 5.0% |
| !! | TTAAGAAAAAAATTATAATA+TGG | + | chr3_3:76911499-76911518 | Msa0474090:intron | 5.0% |
| !! | TAAGAAAAAAATTATAATAT+GGG | + | chr3_3:76911500-76911519 | Msa0474090:intron | 5.0% |
| !! | ATTTAAGAAAATTATATATT+TGG | + | chr3_3:76911692-76911711 | Msa0474090:intron | 5.0% |
| !!! | TTTTTTTTTTTTATTGATTA+CGG | - | chr3_3:76911989-76912008 | None:intergenic | 5.0% |
| AAAGAGGCAGCGGAAGCTAT+TGG | - | chr3_3:76908834-76908853 | None:intergenic | 50.0% | |
| AAGTGAACGATGAAGGTGGG+TGG | - | chr3_3:76908917-76908936 | None:intergenic | 50.0% | |
| GTCGAAGTGAACGATGAAGG+TGG | - | chr3_3:76908921-76908940 | None:intergenic | 50.0% | |
| GAGGTCGAAGTGAACGATGA+AGG | - | chr3_3:76908924-76908943 | None:intergenic | 50.0% | |
| CGTACTAAGTGTGAGGCGAA+CGG | - | chr3_3:76908946-76908965 | None:intergenic | 50.0% | |
| GTGAGGACGTACTAAGTGTG+AGG | - | chr3_3:76908953-76908972 | None:intergenic | 50.0% | |
| GAAAGGAAATACCTGCGGTG+AGG | - | chr3_3:76908970-76908989 | None:intergenic | 50.0% | |
| AGCACCACCGTAAACCTTCA+TGG | - | chr3_3:76909012-76909031 | None:intergenic | 50.0% | |
| !! | CATCTGTAGCACCGACACTT+CGG | - | chr3_3:76911746-76911765 | None:intergenic | 50.0% |
| AGAATGTACCCTAGCAGCAG+CGG | + | chr3_3:76911874-76911893 | Msa0474090:intron | 50.0% | |
| ! | GTTTTGTACCGCTGCTGCTA+GGG | - | chr3_3:76911885-76911904 | None:intergenic | 50.0% |
| TCAGATGACTCTGACCCTTC+AGG | - | chr3_3:76912328-76912347 | None:intergenic | 50.0% | |
| GAAGGGTCAGAGTCATCTGA+CGG | + | chr3_3:76912328-76912347 | Msa0474090:CDS | 50.0% | |
| AAGGGTCAGAGTCATCTGAC+GGG | + | chr3_3:76912329-76912348 | Msa0474090:CDS | 50.0% | |
| CTTCACAACAGTCCCTACAG+TGG | - | chr3_3:76912574-76912593 | None:intergenic | 50.0% | |
| CACTGTAGGGACTGTTGTGA+AGG | + | chr3_3:76912572-76912591 | Msa0474090:CDS | 50.0% | |
| AGGGACTGTTGTGAAGGTAG+AGG | + | chr3_3:76912578-76912597 | Msa0474090:CDS | 50.0% | |
| GTAGAGGATGATGAGGACGA+AGG | + | chr3_3:76912594-76912613 | Msa0474090:CDS | 50.0% | |
| !! | TCTCTTGGCCTGCTTTAAGG+AGG | - | chr3_3:76913310-76913329 | None:intergenic | 50.0% |
| CCTTCTCTTGGCCTGCTTTA+AGG | - | chr3_3:76913313-76913332 | None:intergenic | 50.0% | |
| CCTTAAAGCAGGCCAAGAGA+AGG | + | chr3_3:76913310-76913329 | Msa0474090:CDS | 50.0% | |
| GTGATACCAGAAGACCTACG+TGG | - | chr3_3:76913379-76913398 | None:intergenic | 50.0% | |
| TCTTCTGGTATCACAGCGTG+TGG | + | chr3_3:76913385-76913404 | Msa0474090:CDS | 50.0% | |
| AGATGTGGTAAAAGCTGGGG+AGG | - | chr3_3:76913419-76913438 | None:intergenic | 50.0% | |
| GCACACTTAACAGCCAACAG+AGG | + | chr3_3:76913585-76913604 | Msa0474090:intron | 50.0% | |
| TAAACTGGAAGGAAGTCCGG+AGG | - | chr3_3:76913612-76913631 | None:intergenic | 50.0% | |
| AGAAGGACCACGAGCTTAAC+TGG | - | chr3_3:76913976-76913995 | None:intergenic | 50.0% | |
| CGTGCGCAAAGGAAAACAGA+AGG | - | chr3_3:76913993-76914012 | None:intergenic | 50.0% | |
| ! | TAACTTGCCTCATGAGGTGC+AGG | - | chr3_3:76914022-76914041 | None:intergenic | 50.0% |
| GATAACCTGCACACATGTGC+AGG | + | chr3_3:76914426-76914445 | Msa0474090:intron | 50.0% | |
| TGAATCCTGCACATGTGTGC+AGG | - | chr3_3:76914434-76914453 | None:intergenic | 50.0% | |
| TTGGCATCTCAAACACCTGC+AGG | - | chr3_3:76915167-76915186 | None:intergenic | 50.0% | |
| TAGCTTCCGCTGCCTCTTTC+CGG | + | chr3_3:76908835-76908854 | Msa0474090:five_prime_UTR | 55.0% | |
| TCTGTGGTGTTCAGCGCTCA+CGG | + | chr3_3:76908889-76908908 | Msa0474090:five_prime_UTR | 55.0% | |
| ACTAAGTGTGAGGCGAACGG+AGG | - | chr3_3:76908943-76908962 | None:intergenic | 55.0% | |
| ACTTAGTACGTCCTCACCGC+AGG | + | chr3_3:76908956-76908975 | Msa0474090:five_prime_UTR | 55.0% | |
| GCCCCAGCCCACATAGTAAT+GGG | + | chr3_3:76909205-76909224 | Msa0474090:intron | 55.0% | |
| ! | CCCCATTACTATGTGGGCTG+GGG | - | chr3_3:76909209-76909228 | None:intergenic | 55.0% |
| CCCCAGCCCACATAGTAATG+GGG | + | chr3_3:76909206-76909225 | Msa0474090:intron | 55.0% | |
| GCCCCATTACTATGTGGGCT+GGG | - | chr3_3:76909210-76909229 | None:intergenic | 55.0% | |
| AGCCCCATTACTATGTGGGC+TGG | - | chr3_3:76909211-76909230 | None:intergenic | 55.0% | |
| GGACAGGACACGGACACATA+TGG | - | chr3_3:76911725-76911744 | None:intergenic | 55.0% | |
| !! | GGTTTTGTACCGCTGCTGCT+AGG | - | chr3_3:76911886-76911905 | None:intergenic | 55.0% |
| ! | TGACGCCTTCTTGGCTTTCG+AGG | - | chr3_3:76912035-76912054 | None:intergenic | 55.0% |
| TTGGGTCGTTGACGCCTTCT+TGG | - | chr3_3:76912044-76912063 | None:intergenic | 55.0% | |
| GGCGTCAACGACCCAAATCT+TGG | + | chr3_3:76912048-76912067 | Msa0474090:CDS | 55.0% | |
| ATGCCATACGAGCAAGAGCG+CGG | - | chr3_3:76912097-76912116 | None:intergenic | 55.0% | |
| GGAAAGGGTAGGGTTCGCAA+TGG | - | chr3_3:76912150-76912169 | None:intergenic | 55.0% | |
| AGGGTCAGAGTCATCTGACG+GGG | + | chr3_3:76912330-76912349 | Msa0474090:CDS | 55.0% | |
| GCAGCAGGGTCTTAACTCCA+TGG | - | chr3_3:76912488-76912507 | None:intergenic | 55.0% | |
| AGCACACCACGTAGGTCTTC+TGG | + | chr3_3:76913370-76913389 | Msa0474090:CDS | 55.0% | |
| GTGGTAAAAGCTGGGGAGGA+AGG | - | chr3_3:76913415-76913434 | None:intergenic | 55.0% | |
| GTCATGGGCCACAGAAGATG+AGG | + | chr3_3:76913463-76913482 | Msa0474090:CDS | 55.0% | |
| AACAGCCAACAGAGGACCTC+CGG | + | chr3_3:76913593-76913612 | Msa0474090:intron | 55.0% | |
| CGAGCTGTTAGTGACAGCTG+AGG | + | chr3_3:76914362-76914381 | Msa0474090:intron | 55.0% | |
| GAGGAGGCTCCATGGATCAA+AGG | - | chr3_3:76914567-76914586 | None:intergenic | 55.0% | |
| ! | TTCAGTGGCGGAGTCTGGAT+CGG | - | chr3_3:76914589-76914608 | None:intergenic | 55.0% |
| ! | CTCTATTCAGTGGCGGAGTC+TGG | - | chr3_3:76914594-76914613 | None:intergenic | 55.0% |
| GAAGGCTGAAGGCAACCAGA+AGG | + | chr3_3:76915066-76915085 | Msa0474090:three_prime_UTR | 55.0% | |
| CAAATAGGTTGCGCCGCTGC+CGG | - | chr3_3:76908857-76908876 | None:intergenic | 60.0% | |
| GGGCTGGGGCCAAAACTTCA+AGG | - | chr3_3:76909195-76909214 | None:intergenic | 60.0% | |
| GGCCCCAGCCCACATAGTAA+TGG | + | chr3_3:76909204-76909223 | Msa0474090:intron | 60.0% | |
| ! | TTTGGGGCTTGGGGCCTTGA+GGG | - | chr3_3:76909288-76909307 | None:intergenic | 60.0% |
| !!! | TTTTGGGGCTTGGGGCCTTG+AGG | - | chr3_3:76909289-76909308 | None:intergenic | 60.0% |
| CCGACACTTCGGACAGGACA+CGG | - | chr3_3:76911735-76911754 | None:intergenic | 60.0% | |
| CCGTGTCCTGTCCGAAGTGT+CGG | + | chr3_3:76911732-76911751 | Msa0474090:intron | 60.0% | |
| !! | GTAGCACCGACACTTCGGAC+AGG | - | chr3_3:76911741-76911760 | None:intergenic | 60.0% |
| ! | AGCAAGAGCGCGGCCAAATG+GGG | - | chr3_3:76912087-76912106 | None:intergenic | 60.0% |
| ! | GAGCAAGAGCGCGGCCAAAT+GGG | - | chr3_3:76912088-76912107 | None:intergenic | 60.0% |
| GGGGAACAAGCACACCACGT+AGG | + | chr3_3:76913362-76913381 | Msa0474090:CDS | 60.0% | |
| GAAGTCCGGAGGTCCTCTGT+TGG | - | chr3_3:76913601-76913620 | None:intergenic | 60.0% | |
| GCAGCAACCTGCACCTCATG+AGG | + | chr3_3:76914012-76914031 | Msa0474090:intron | 60.0% | |
| CGGCAGCGGCGCAACCTATT+TGG | + | chr3_3:76908855-76908874 | Msa0474090:five_prime_UTR | 65.0% | |
| ! | CGAGCAAGAGCGCGGCCAAA+TGG | - | chr3_3:76912089-76912108 | None:intergenic | 65.0% |
| TGGCCGCGCTCTTGCTCGTA+TGG | + | chr3_3:76912091-76912110 | Msa0474090:CDS | 65.0% | |
| GCAGGTTGCTGCGTGCGCAA+AGG | - | chr3_3:76914004-76914023 | None:intergenic | 65.0% | |
| CTGGATCGGAGGAGGCTCCA+TGG | - | chr3_3:76914575-76914594 | None:intergenic | 65.0% | |
| ! | AGTGGCGGAGTCTGGATCGG+AGG | - | chr3_3:76914586-76914605 | None:intergenic | 65.0% |
| CCGCTGCCGGAAAGAGGCAG+CGG | - | chr3_3:76908844-76908863 | None:intergenic | 70.0% | |
| CCGCTGCCTCTTTCCGGCAG+CGG | + | chr3_3:76908841-76908860 | Msa0474090:five_prime_UTR | 70.0% | |
| GTTGCGCCGCTGCCGGAAAG+AGG | - | chr3_3:76908850-76908869 | None:intergenic | 70.0% | |
| GGCGGAGTCTGGATCGGAGG+AGG | - | chr3_3:76914583-76914602 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 76908778 | 76915454 | 76908778 | ID=Msa0474090;Name=Msa0474090 |
| chr3_3 | mRNA | 76908778 | 76915454 | 76908778 | ID=Msa0474090-mRNA-1;Parent=Msa0474090;Name=Msa0474090-mRNA-1;_AED=0.14;_eAED=0.14;_QI=210|0.75|0.88|1|0.75|0.66|9|355|276 |
| chr3_3 | exon | 76908778 | 76908977 | 76908778 | ID=Msa0474090-mRNA-1:exon:20333;Parent=Msa0474090-mRNA-1 |
| chr3_3 | exon | 76912019 | 76912176 | 76912019 | ID=Msa0474090-mRNA-1:exon:20334;Parent=Msa0474090-mRNA-1 |
| chr3_3 | exon | 76912290 | 76912360 | 76912290 | ID=Msa0474090-mRNA-1:exon:20335;Parent=Msa0474090-mRNA-1 |
| chr3_3 | exon | 76912435 | 76912659 | 76912435 | ID=Msa0474090-mRNA-1:exon:20336;Parent=Msa0474090-mRNA-1 |
| chr3_3 | exon | 76913299 | 76913484 | 76913299 | ID=Msa0474090-mRNA-1:exon:20337;Parent=Msa0474090-mRNA-1 |
| chr3_3 | exon | 76913598 | 76913663 | 76913598 | ID=Msa0474090-mRNA-1:exon:20338;Parent=Msa0474090-mRNA-1 |
| chr3_3 | exon | 76913808 | 76913901 | 76913808 | ID=Msa0474090-mRNA-1:exon:20339;Parent=Msa0474090-mRNA-1 |
| chr3_3 | exon | 76914976 | 76915087 | 76914976 | ID=Msa0474090-mRNA-1:exon:20340;Parent=Msa0474090-mRNA-1 |
| chr3_3 | exon | 76915171 | 76915454 | 76915171 | ID=Msa0474090-mRNA-1:exon:20341;Parent=Msa0474090-mRNA-1 |
| chr3_3 | five_prime_UTR | 76908778 | 76908977 | 76908778 | ID=Msa0474090-mRNA-1:five_prime_utr;Parent=Msa0474090-mRNA-1 |
| chr3_3 | five_prime_UTR | 76912019 | 76912028 | 76912019 | ID=Msa0474090-mRNA-1:five_prime_utr;Parent=Msa0474090-mRNA-1 |
| chr3_3 | CDS | 76912029 | 76912176 | 76912029 | ID=Msa0474090-mRNA-1:cds;Parent=Msa0474090-mRNA-1 |
| chr3_3 | CDS | 76912290 | 76912360 | 76912290 | ID=Msa0474090-mRNA-1:cds;Parent=Msa0474090-mRNA-1 |
| chr3_3 | CDS | 76912435 | 76912659 | 76912435 | ID=Msa0474090-mRNA-1:cds;Parent=Msa0474090-mRNA-1 |
| chr3_3 | CDS | 76913299 | 76913484 | 76913299 | ID=Msa0474090-mRNA-1:cds;Parent=Msa0474090-mRNA-1 |
| chr3_3 | CDS | 76913598 | 76913663 | 76913598 | ID=Msa0474090-mRNA-1:cds;Parent=Msa0474090-mRNA-1 |
| chr3_3 | CDS | 76913808 | 76913901 | 76913808 | ID=Msa0474090-mRNA-1:cds;Parent=Msa0474090-mRNA-1 |
| chr3_3 | CDS | 76914976 | 76915016 | 76914976 | ID=Msa0474090-mRNA-1:cds;Parent=Msa0474090-mRNA-1 |
| chr3_3 | three_prime_UTR | 76915017 | 76915087 | 76915017 | ID=Msa0474090-mRNA-1:three_prime_utr;Parent=Msa0474090-mRNA-1 |
| chr3_3 | three_prime_UTR | 76915171 | 76915454 | 76915171 | ID=Msa0474090-mRNA-1:three_prime_utr;Parent=Msa0474090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
