Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136380 | XP_013470010.1 | 91.228 | 855 | 22 | 2 | 1 | 839 | 26 | 843 | 0.0 | 1462 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136380 | sp|Q8H991|HAZ1_ORYSJ | 37.537 | 682 | 289 | 17 | 141 | 731 | 37 | 672 | 2.24e-113 | 367 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136380 | A0A072VRI3 | 91.228 | 855 | 22 | 2 | 1 | 839 | 26 | 843 | 0.0 | 1462 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0136380 | TF | HB-PHD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010770 | Msa0136380 | 0.808736 | 2.674477e-50 | -8.615850e-47 |
| Msa0027390 | Msa0136380 | 0.830422 | 2.963828e-55 | -8.615850e-47 |
| Msa0045490 | Msa0136380 | 0.823587 | 1.278564e-53 | -8.615850e-47 |
| Msa0081230 | Msa0136380 | 0.801688 | 7.999993e-49 | -8.615850e-47 |
| Msa0096580 | Msa0136380 | 0.801875 | 7.325304e-49 | -8.615850e-47 |
| Msa0097950 | Msa0136380 | 0.820838 | 5.549686e-53 | -8.615850e-47 |
| Msa0104610 | Msa0136380 | 0.833623 | 4.794516e-56 | -8.615850e-47 |
| Msa0108870 | Msa0136380 | 0.811842 | 5.718311e-51 | -8.615850e-47 |
| Msa0133630 | Msa0136380 | 0.803021 | 4.252595e-49 | -8.615850e-47 |
| Msa0136380 | Msa0156230 | 0.806998 | 6.263730e-50 | -8.615850e-47 |
| Msa0136380 | Msa0165300 | 0.834771 | 2.472401e-56 | -8.615850e-47 |
| Msa0136380 | Msa0179000 | 0.864491 | 1.170229e-64 | -8.615850e-47 |
| Msa0136380 | Msa0187500 | 0.828887 | 7.003856e-55 | -8.615850e-47 |
| Msa0136380 | Msa0205850 | 0.803750 | 3.003102e-49 | -8.615850e-47 |
| Msa0136380 | Msa0227400 | 0.805971 | 1.031423e-49 | -8.615850e-47 |
| Msa0136380 | Msa0239450 | 0.802686 | 4.988085e-49 | -8.615850e-47 |
| Msa0136380 | Msa0239940 | 0.848033 | 7.932186e-60 | -8.615850e-47 |
| Msa0136380 | Msa0245850 | 0.804282 | 2.328086e-49 | -8.615850e-47 |
| Msa0136380 | Msa0250670 | 0.816627 | 5.016812e-52 | -8.615850e-47 |
| Msa0136380 | Msa0259270 | 0.815516 | 8.883381e-52 | -8.615850e-47 |
| Msa0136380 | Msa0264930 | 0.800861 | 1.181570e-48 | -8.615850e-47 |
| Msa0136380 | Msa0267870 | 0.830735 | 2.483674e-55 | -8.615850e-47 |
| Msa0136380 | Msa0288730 | 0.800911 | 1.153906e-48 | -8.615850e-47 |
| Msa0136380 | Msa0289400 | 0.818719 | 1.692776e-52 | -8.615850e-47 |
| Msa0136380 | Msa0295590 | 0.819530 | 1.106332e-52 | -8.615850e-47 |
| Msa0136380 | Msa0308200 | 0.831073 | 2.052592e-55 | -8.615850e-47 |
| Msa0136380 | Msa0308220 | 0.833750 | 4.456202e-56 | -8.615850e-47 |
| Msa0136380 | Msa0318720 | 0.801985 | 6.954433e-49 | -8.615850e-47 |
| Msa0136380 | Msa0322590 | 0.807123 | 5.894459e-50 | -8.615850e-47 |
| Msa0136380 | Msa0327410 | 0.823650 | 1.235901e-53 | -8.615850e-47 |
| Msa0136380 | Msa0343190 | 0.819022 | 1.444224e-52 | -8.615850e-47 |
| Msa0136380 | Msa0381000 | 0.809454 | 1.877040e-50 | -8.615850e-47 |
| Msa0136380 | Msa0381080 | 0.821094 | 4.846374e-53 | -8.615850e-47 |
| Msa0136380 | Msa0410300 | 0.805904 | 1.065387e-49 | -8.615850e-47 |
| Msa0136380 | Msa0428170 | 0.823341 | 1.459310e-53 | -8.615850e-47 |
| Msa0136380 | Msa0461590 | 0.818241 | 2.172464e-52 | -8.615850e-47 |
| Msa0136380 | Msa0464900 | 0.822765 | 1.987837e-53 | -8.615850e-47 |
| Msa0136380 | Msa0473080 | 0.813287 | 2.762728e-51 | -8.615850e-47 |
| Msa0136380 | Msa0484840 | 0.814031 | 1.894805e-51 | -8.615850e-47 |
| Msa0136380 | Msa0485120 | 0.819570 | 1.083704e-52 | -8.615850e-47 |
| Msa0136380 | Msa0542160 | 0.806153 | 9.444489e-50 | -8.615850e-47 |
| Msa0136380 | Msa0545060 | 0.819544 | 1.098252e-52 | -8.615850e-47 |
| Msa0136380 | Msa0547400 | 0.804260 | 2.352294e-49 | -8.615850e-47 |
| Msa0136380 | Msa0549280 | 0.803171 | 3.959634e-49 | -8.615850e-47 |
| Msa0136380 | Msa0600610 | 0.806333 | 8.657782e-50 | -8.615850e-47 |
| Msa0136380 | Msa0610500 | 0.808307 | 3.303068e-50 | -8.615850e-47 |
| Msa0136380 | Msa0618950 | 0.800865 | 1.179473e-48 | -8.615850e-47 |
| Msa0136380 | Msa0641140 | 0.806176 | 9.342570e-50 | -8.615850e-47 |
| Msa0136380 | Msa0651150 | 0.805623 | 1.220792e-49 | -8.615850e-47 |
| Msa0136380 | Msa0652300 | 0.805908 | 1.063784e-49 | -8.615850e-47 |
| Msa0136380 | Msa0656580 | 0.803266 | 3.783922e-49 | -8.615850e-47 |
| Msa0136380 | Msa0675990 | 0.835481 | 1.636637e-56 | -8.615850e-47 |
| Msa0136380 | Msa0726860 | 0.801832 | 7.476027e-49 | -8.615850e-47 |
| Msa0136380 | Msa0737800 | 0.816297 | 5.947050e-52 | -8.615850e-47 |
| Msa0136380 | Msa0739120 | 0.812103 | 5.017228e-51 | -8.615850e-47 |
| Msa0136380 | Msa0750430 | 0.800621 | 1.322719e-48 | -8.615850e-47 |
| Msa0136380 | Msa0754720 | -0.807569 | 4.741603e-50 | -8.615850e-47 |
| Msa0136380 | Msa0756930 | 0.807228 | 5.601508e-50 | -8.615850e-47 |
| Msa0136380 | Msa0773200 | 0.804138 | 2.494115e-49 | -8.615850e-47 |
| Msa0136380 | Msa0804680 | 0.806216 | 9.162331e-50 | -8.615850e-47 |
| Msa0136380 | Msa0817270 | 0.808992 | 2.358042e-50 | -8.615850e-47 |
| Msa0136380 | Msa0820250 | 0.812803 | 3.528022e-51 | -8.615850e-47 |
| Msa0136380 | Msa0829620 | 0.804158 | 2.470780e-49 | -8.615850e-47 |
| Msa0136380 | Msa0836500 | 0.815254 | 1.015760e-51 | -8.615850e-47 |
| Msa0136380 | Msa0844230 | 0.823635 | 1.245337e-53 | -8.615850e-47 |
| Msa0136380 | Msa0850710 | 0.806770 | 6.999733e-50 | -8.615850e-47 |
| Msa0136380 | Msa0869100 | 0.821681 | 3.547837e-53 | -8.615850e-47 |
| Msa0136380 | Msa0881580 | 0.801692 | 7.986197e-49 | -8.615850e-47 |
| Msa0136380 | Msa0899350 | 0.818734 | 1.679409e-52 | -8.615850e-47 |
| Msa0136380 | Msa0906690 | 0.802275 | 6.059987e-49 | -8.615850e-47 |
| Msa0136380 | Msa0908170 | 0.807675 | 4.502386e-50 | -8.615850e-47 |
| Msa0136380 | Msa0959010 | 0.800502 | 1.398564e-48 | -8.615850e-47 |
| Msa0136380 | Msa0971090 | 0.801639 | 8.187774e-49 | -8.615850e-47 |
| Msa0136380 | Msa0980940 | 0.812027 | 5.211201e-51 | -8.615850e-47 |
| Msa0136380 | Msa1031770 | 0.828074 | 1.100291e-54 | -8.615850e-47 |
| Msa0136380 | Msa1032170 | 0.817362 | 3.430205e-52 | -8.615850e-47 |
| Msa0136380 | Msa1040890 | 0.820880 | 5.428849e-53 | -8.615850e-47 |
| Msa0136380 | Msa1070840 | 0.803988 | 2.679917e-49 | -8.615850e-47 |
| Msa0136380 | Msa1081560 | 0.802852 | 4.608131e-49 | -8.615850e-47 |
| Msa0136380 | Msa1093330 | 0.800742 | 1.249658e-48 | -8.615850e-47 |
| Msa0136380 | Msa1112390 | 0.808806 | 2.584820e-50 | -8.615850e-47 |
| Msa0136380 | Msa1125470 | 0.810846 | 9.407650e-51 | -8.615850e-47 |
| Msa0136380 | Msa1125550 | 0.812166 | 4.861320e-51 | -8.615850e-47 |
| Msa0136380 | Msa1127130 | 0.815902 | 7.285240e-52 | -8.615850e-47 |
| Msa0136380 | Msa1130530 | 0.803866 | 2.841259e-49 | -8.615850e-47 |
| Msa0136380 | Msa1133400 | 0.804070 | 2.576902e-49 | -8.615850e-47 |
| Msa0136380 | Msa1158660 | 0.805656 | 1.201624e-49 | -8.615850e-47 |
| Msa0136380 | Msa1166410 | 0.802691 | 4.975781e-49 | -8.615850e-47 |
| Msa0136380 | Msa1174100 | 0.830285 | 3.200349e-55 | -8.615850e-47 |
| Msa0136380 | Msa1214880 | 0.811153 | 8.071378e-51 | -8.615850e-47 |
| Msa0136380 | Msa1280620 | 0.823040 | 1.715778e-53 | -8.615850e-47 |
| Msa0136380 | Msa1300860 | 0.830884 | 2.283831e-55 | -8.615850e-47 |
| Msa0136380 | Msa1306390 | 0.814200 | 1.738840e-51 | -8.615850e-47 |
| Msa0136380 | Msa1320820 | 0.804405 | 2.194564e-49 | -8.615850e-47 |
| Msa0136380 | Msa1331920 | 0.826621 | 2.453961e-54 | -8.615850e-47 |
| Msa0136380 | Msa1340040 | -0.810201 | 1.296610e-50 | -8.615850e-47 |
| Msa0136380 | Msa1376200 | 0.830344 | 3.095447e-55 | -8.615850e-47 |
| Msa0136380 | Msa1386230 | 0.805000 | 1.648566e-49 | -8.615850e-47 |
| Msa0136380 | Msa1415940 | 0.806817 | 6.841997e-50 | -8.615850e-47 |
| Msa0136380 | Msa1416390 | 0.804478 | 2.118955e-49 | -8.615850e-47 |
| Msa0136380 | Msa1425010 | 0.801431 | 9.034220e-49 | -8.615850e-47 |
| Msa0136380 | Msa1428370 | 0.806094 | 9.719375e-50 | -8.615850e-47 |
| Msa0136380 | Msa1452480 | 0.958712 | 1.192171e-116 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136380 | MtrunA17_Chr1g0207661 | 91.228 | 855 | 22 | 2 | 1 | 839 | 26 | 843 | 0.0 | 1462 |
| Msa0136380 | MtrunA17_Chr2g0298701 | 30.214 | 513 | 234 | 14 | 220 | 722 | 135 | 533 | 1.76e-55 | 204 |
| Msa0136380 | MtrunA17_Chr6g0469311 | 85.417 | 48 | 7 | 0 | 76 | 123 | 50 | 97 | 6.75e-18 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136380 | AT3G19510.1 | 42.152 | 567 | 221 | 15 | 206 | 722 | 158 | 667 | 3.32e-106 | 343 |
| Msa0136380 | AT3G19510.2 | 42.152 | 567 | 221 | 15 | 206 | 722 | 158 | 667 | 3.32e-106 | 343 |
Find 241 sgRNAs with CRISPR-Local
Find 482 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGGATCTATTTCAAAATT+TGG | 0.074634 | 1_3:+68212501 | Msa0136380:CDS |
| GAGGATTTGACTCCGGTTTC+TGG | 0.158146 | 1_3:+68213787 | Msa0136380:CDS |
| GATGATGTTAAGAACTTTAA+AGG | 0.214262 | 1_3:+68213688 | Msa0136380:CDS |
| TTCAATCCTGTAGTAAGATT+TGG | 0.226370 | 1_3:-68211883 | None:intergenic |
| TGGTGACCCTGGAGTTATTT+TGG | 0.234456 | 1_3:-68214351 | None:intergenic |
| TTTATATGGATGCGGATTAA+AGG | 0.244459 | 1_3:+68215971 | Msa0136380:three_prime_UTR |
| AACTTGATTGATGCTTATTC+TGG | 0.261982 | 1_3:+68210669 | Msa0136380:CDS |
| TTCTTCTCCTTCTTCATGTT+AGG | 0.264991 | 1_3:-68208935 | None:intergenic |
| TCAATCCTGTAGTAAGATTT+GGG | 0.267367 | 1_3:-68211882 | None:intergenic |
| CCAAAGCTTGCTTGCTTGCT+TGG | 0.272806 | 1_3:+68209562 | Msa0136380:five_prime_UTR |
| CGTGCATCCTTCAAGTGTTT+TGG | 0.276722 | 1_3:-68214459 | None:intergenic |
| TATACATACTCCTCCAAATC+TGG | 0.284287 | 1_3:-68208965 | None:intergenic |
| AATTTCGCCTTAAGCCAATT+TGG | 0.284533 | 1_3:-68211846 | None:intergenic |
| TAGTTGTCAGTTAGCAGTTT+TGG | 0.288683 | 1_3:+68215796 | Msa0136380:three_prime_UTR |
| AGAAAGCTTGGCGCAAGAAC+TGG | 0.299690 | 1_3:+68215049 | Msa0136380:CDS |
| TAATGTGAGCATCATTTATA+TGG | 0.300014 | 1_3:+68215957 | Msa0136380:three_prime_UTR |
| TAATTTGCGTCGCAGAATTT+CGG | 0.302386 | 1_3:-68212473 | None:intergenic |
| TCAATCGGTTCAGGATCTTT+AGG | 0.304332 | 1_3:-68210495 | None:intergenic |
| GAGCTACTGGATCCACCTTC+TGG | 0.306748 | 1_3:+68210180 | Msa0136380:CDS |
| TTGAAGCTTGAGATACTAAA+AGG | 0.311264 | 1_3:-68215881 | None:intergenic |
| GACTTACTTCATACAGCTTT+TGG | 0.314803 | 1_3:-68213837 | None:intergenic |
| TGGATCTCAAACGATATTCT+TGG | 0.321274 | 1_3:+68215666 | Msa0136380:three_prime_UTR |
| CTCAATCTTTGATTGCTTAC+CGG | 0.331704 | 1_3:+68215522 | Msa0136380:CDS |
| TCAGAATCAAACAAAGATTC+AGG | 0.338756 | 1_3:-68212550 | None:intergenic |
| CCAGCAGCTGTAGCTGCTTC+GGG | 0.350968 | 1_3:-68213313 | None:intergenic |
| GGATCTTGCTGCTACAATTA+AGG | 0.352745 | 1_3:+68213621 | Msa0136380:CDS |
| TCCAGCAGCTGTAGCTGCTT+CGG | 0.353688 | 1_3:-68213314 | None:intergenic |
| GAAGAACGGTAGCCCAGATT+TGG | 0.363105 | 1_3:+68208952 | Msa0136380:five_prime_UTR |
| GAATTTGATTTCACTTGAAC+AGG | 0.365153 | 1_3:-68210150 | None:intergenic |
| TTGTGTGATGTGTGTTTCCT+TGG | 0.366078 | 1_3:+68209858 | Msa0136380:five_prime_UTR |
| GCCCGTTGAATCTCCTTCTC+TGG | 0.369302 | 1_3:-68212445 | None:intergenic |
| CTTGAAGGATGCACGGAATC+TGG | 0.377830 | 1_3:+68214467 | Msa0136380:CDS |
| CCAGGTACAACTAGCTTTAA+CGG | 0.377993 | 1_3:-68209602 | None:intergenic |
| CGGGTATCACCAGCTCTGTT+TGG | 0.380960 | 1_3:+68212762 | Msa0136380:CDS |
| ATCATTTGGTGGAAACAATA+AGG | 0.381442 | 1_3:-68215847 | None:intergenic |
| TATCGAAGAAGTATGTATTA+AGG | 0.385742 | 1_3:+68210421 | Msa0136380:CDS |
| CCAAGCAAGCAAGCAAGCTT+TGG | 0.389596 | 1_3:-68209562 | None:intergenic |
| GACAGTTCATCGGTTATAGA+TGG | 0.390879 | 1_3:-68213736 | None:intergenic |
| TGAATCTTTGTTTGATTCTG+AGG | 0.392645 | 1_3:+68212552 | Msa0136380:CDS |
| TTCGCATCCTCTGGAGCATC+AGG | 0.392731 | 1_3:-68213397 | None:intergenic |
| CCTTCAACCTTCGCATCCTC+TGG | 0.393078 | 1_3:-68213406 | None:intergenic |
| TTATAGGTTGACAAATGGTT+TGG | 0.393912 | 1_3:+68215175 | Msa0136380:intron |
| GAGCTGAAAATAAAGGAGAT+AGG | 0.394447 | 1_3:+68215329 | Msa0136380:CDS |
| GAGCAGGAACAGATTGTGTT+TGG | 0.396385 | 1_3:-68210278 | None:intergenic |
| CTTAAGCCAATTTGGTAAAA+CGG | 0.396525 | 1_3:-68211838 | None:intergenic |
| CTTAGACTTACGAAAGGCTT+TGG | 0.396612 | 1_3:+68209823 | Msa0136380:five_prime_UTR |
| TCTTCTCCTTCTTCATGTTA+GGG | 0.404321 | 1_3:-68208934 | None:intergenic |
| AGGATTTGACTCCGGTTTCT+GGG | 0.404664 | 1_3:+68213788 | Msa0136380:CDS |
| GGACTAATGATTAGTTCAAC+TGG | 0.405013 | 1_3:+68209879 | Msa0136380:five_prime_UTR |
| TTAAGCCAATTTGGTAAAAC+GGG | 0.406040 | 1_3:-68211837 | None:intergenic |
| CCCGAAGCAGCTACAGCTGC+TGG | 0.412983 | 1_3:+68213313 | Msa0136380:CDS |
| GACAGTGGAGCTGAAAATAA+AGG | 0.414026 | 1_3:+68215274 | Msa0136380:CDS |
| GTATCTTTAGCACCAGGATT+GGG | 0.417924 | 1_3:-68213559 | None:intergenic |
| CAAGTGAAAACAGAATCTTC+TGG | 0.418110 | 1_3:+68210300 | Msa0136380:CDS |
| AATCAAAGATTGAGCCGTTA+TGG | 0.420656 | 1_3:-68215513 | None:intergenic |
| ACTTGGAGAAGCTGTTGTTC+AGG | 0.422804 | 1_3:+68214517 | Msa0136380:CDS |
| TTATTTGAGGCGTTTCCATT+TGG | 0.424610 | 1_3:-68214371 | None:intergenic |
| GATTTCACTTGAACAGGAAC+GGG | 0.425167 | 1_3:-68210144 | None:intergenic |
| CCAGAGGATGCGAAGGTTGA+AGG | 0.427357 | 1_3:+68213406 | Msa0136380:CDS |
| TCTTTAGCAGAGCCAGATCT+TGG | 0.428193 | 1_3:+68213760 | Msa0136380:CDS |
| TTTGATTGCTTACCGGTAGC+TGG | 0.429095 | 1_3:+68215529 | Msa0136380:CDS |
| CATCATCACTAGTATCACTA+TGG | 0.433662 | 1_3:-68214280 | None:intergenic |
| GAAACGAGTGATGCAGTTAC+CGG | 0.433774 | 1_3:+68210243 | Msa0136380:CDS |
| ATGCTGATGGGTGTTCCTCT+TGG | 0.436575 | 1_3:-68214408 | None:intergenic |
| GATCCCGATGCTCCCAATCC+TGG | 0.436787 | 1_3:+68213547 | Msa0136380:CDS |
| TCCTCGGATGATCATCATCT+TGG | 0.437213 | 1_3:+68215646 | Msa0136380:three_prime_UTR |
| GTAACAGTATCAATCGGTTC+AGG | 0.439745 | 1_3:-68210504 | None:intergenic |
| TTCTCAGTCGTAAAATCGTT+GGG | 0.440583 | 1_3:-68209915 | None:intergenic |
| CGGTTATAGATGGCTTCTTA+CGG | 0.441698 | 1_3:-68213726 | None:intergenic |
| CTCAGAGTCAGATGTGAAAT+CGG | 0.442930 | 1_3:-68213599 | None:intergenic |
| AAATTCTGTGAATGAGCTAC+TGG | 0.443097 | 1_3:+68210167 | Msa0136380:CDS |
| CTCCCTTATAGGTTGACAAA+TGG | 0.447598 | 1_3:+68215170 | Msa0136380:intron |
| GAAAGCGGAGCTGAAAATAA+AGG | 0.453174 | 1_3:+68215322 | Msa0136380:CDS |
| ACTTGAACAGGAACGGGTTG+TGG | 0.457052 | 1_3:-68210138 | None:intergenic |
| ATGCTTATTCTGGTGAGGGC+TGG | 0.457759 | 1_3:+68210679 | Msa0136380:CDS |
| CTTACGAAAGGCTTTGGTTG+TGG | 0.459145 | 1_3:+68209829 | Msa0136380:five_prime_UTR |
| TCACCCACCAAAACACTTGA+AGG | 0.460627 | 1_3:+68214452 | Msa0136380:CDS |
| GAAAAGAAATGTTGAAAGGC+TGG | 0.463300 | 1_3:+68213810 | Msa0136380:CDS |
| TCATCTTTGCAATCACATCC+TGG | 0.464187 | 1_3:-68212922 | None:intergenic |
| TAGTAGCCAACACTTTGGTC+TGG | 0.464284 | 1_3:-68212702 | None:intergenic |
| TCATGTAAGGAGGCCAGTCC+AGG | 0.466183 | 1_3:+68215226 | Msa0136380:CDS |
| TACAGCTGCTGGAAGTATCT+TGG | 0.467307 | 1_3:+68213324 | Msa0136380:CDS |
| ATCTGCCTCTGAGAAATTTG+AGG | 0.471666 | 1_3:+68213462 | Msa0136380:CDS |
| AAACCCCAAGCTCGAAGAAA+AGG | 0.472897 | 1_3:+68215449 | Msa0136380:CDS |
| TCAATACATGGGTCTTCCTT+CGG | 0.473784 | 1_3:+68213501 | Msa0136380:CDS |
| GCACCAGGATTGGGAGCATC+GGG | 0.473958 | 1_3:-68213550 | None:intergenic |
| AGTATCTTTAGCACCAGGAT+TGG | 0.476428 | 1_3:-68213560 | None:intergenic |
| AAATCCTCTTCACCAAGATC+TGG | 0.477201 | 1_3:-68213772 | None:intergenic |
| GCGTTTCCATTTGGTGACCC+TGG | 0.477588 | 1_3:-68214362 | None:intergenic |
| GCGACAGAGCTCTGCGGTCG+AGG | 0.478343 | 1_3:+68210457 | Msa0136380:CDS |
| ATAAGGTCTCCATAACTAAA+CGG | 0.482679 | 1_3:-68215830 | None:intergenic |
| CTTCTCAGTCGTAAAATCGT+TGG | 0.484570 | 1_3:-68209916 | None:intergenic |
| GTGAGGGCTGGAAAGGATAC+AGG | 0.485234 | 1_3:+68210691 | Msa0136380:CDS |
| ATGTATTGATCCTCATGGCC+TGG | 0.487322 | 1_3:-68213487 | None:intergenic |
| GCAGACATCTGAAGCAGGGC+TGG | 0.488443 | 1_3:+68215489 | Msa0136380:CDS |
| ATTGATGCTTATTCTGGTGA+GGG | 0.490730 | 1_3:+68210675 | Msa0136380:CDS |
| AGCACCAGGATTGGGAGCAT+CGG | 0.491856 | 1_3:-68213551 | None:intergenic |
| ATGAAATGAAGACAAAAGAA+AGG | 0.492286 | 1_3:+68210541 | Msa0136380:CDS |
| GTTCCTCTTGGCAGTACGGC+GGG | 0.492474 | 1_3:-68214396 | None:intergenic |
| GAGCCGCAGACATCTGAAGC+AGG | 0.495421 | 1_3:+68215484 | Msa0136380:CDS |
| AGGAGATAATGCTTCGCAGC+AGG | 0.495905 | 1_3:+68215294 | Msa0136380:CDS |
| AAGTATGTATTAAGGTCGTT+AGG | 0.498676 | 1_3:+68210429 | Msa0136380:CDS |
| GATTGATGCTTATTCTGGTG+AGG | 0.499509 | 1_3:+68210674 | Msa0136380:CDS |
| TTATTGCTTGTGCCAGCTAC+CGG | 0.500696 | 1_3:-68215541 | None:intergenic |
| AAGTATCTTGGATCACAACC+TGG | 0.500741 | 1_3:+68213336 | Msa0136380:CDS |
| AGCTGAAAATAAAGGAGATA+GGG | 0.501616 | 1_3:+68215330 | Msa0136380:CDS |
| GACAGAGAACAAAGTGTGCT+TGG | 0.502185 | 1_3:+68209988 | Msa0136380:CDS |
| ATAACTCCAGGGTCACCAAA+TGG | 0.504477 | 1_3:+68214356 | Msa0136380:CDS |
| GGATCTTCATACAATAAACT+TGG | 0.506409 | 1_3:+68214500 | Msa0136380:CDS |
| CCGTTAAAGCTAGTTGTACC+TGG | 0.507504 | 1_3:+68209602 | Msa0136380:five_prime_UTR |
| GCCAGAGAAGGAGATTCAAC+GGG | 0.508450 | 1_3:+68212444 | Msa0136380:CDS |
| TACTAGTGATGATGAAGATT+GGG | 0.508913 | 1_3:+68214289 | Msa0136380:CDS |
| GGGTGTTCCTCTTGGCAGTA+CGG | 0.509060 | 1_3:-68214400 | None:intergenic |
| TCTGAGAAATTTGAGGATCC+AGG | 0.510014 | 1_3:+68213469 | Msa0136380:CDS |
| GTTCCGACATTCATCATGTA+AGG | 0.513678 | 1_3:+68215213 | Msa0136380:CDS |
| GAAAGCTTGGCGCAAGAACT+GGG | 0.514904 | 1_3:+68215050 | Msa0136380:CDS |
| ACTGCATCTCTCATTTCGCC+AGG | 0.515178 | 1_3:-68210093 | None:intergenic |
| GCGTCGCAGAATTTCGGACT+TGG | 0.515667 | 1_3:-68212467 | None:intergenic |
| GAGAGAAAGAGAGGGATGAG+TGG | 0.516963 | 1_3:-68209046 | None:intergenic |
| ATTATTAGTAGCCAACACTT+TGG | 0.517226 | 1_3:-68212707 | None:intergenic |
| GAACGGTAGCCCAGATTTGG+AGG | 0.518288 | 1_3:+68208955 | Msa0136380:five_prime_UTR |
| ATCTCAAACGATATTCTTGG+AGG | 0.518724 | 1_3:+68215669 | Msa0136380:three_prime_UTR |
| ATACTAGTGATGATGAAGAT+TGG | 0.521341 | 1_3:+68214288 | Msa0136380:CDS |
| CTGCGGCTTACAGTTCCACC+TGG | 0.522100 | 1_3:+68212880 | Msa0136380:intron |
| GGTTTGGCAATTCTCGTTGG+AGG | 0.524613 | 1_3:+68215191 | Msa0136380:CDS |
| TACAGTTCCACCTGGCGATG+AGG | 0.529326 | 1_3:+68212888 | Msa0136380:intron |
| CATAACCAACCCTCATCGCC+AGG | 0.530946 | 1_3:-68212898 | None:intergenic |
| AATCTTGCTACCTTACGAAA+AGG | 0.533200 | 1_3:-68215597 | None:intergenic |
| TGATTTCACTTGAACAGGAA+CGG | 0.534261 | 1_3:-68210145 | None:intergenic |
| AGTAATATCTCAGTTGAGCT+CGG | 0.534961 | 1_3:-68210623 | None:intergenic |
| CGCAAGCCCTAACATGAAGA+AGG | 0.535185 | 1_3:+68208928 | Msa0136380:five_prime_UTR |
| CTGGGAAAAGAAATGTTGAA+AGG | 0.535766 | 1_3:+68213806 | Msa0136380:CDS |
| TGGCATACACGGGATAAGCT+TGG | 0.538222 | 1_3:-68211932 | None:intergenic |
| AATGGTTTGGCAATTCTCGT+TGG | 0.540198 | 1_3:+68215188 | Msa0136380:CDS |
| TTGGATTCGTTATGTGCTGA+AGG | 0.540214 | 1_3:+68212520 | Msa0136380:CDS |
| GTGATGGTGCTTGTGACCGC+GGG | 0.542507 | 1_3:+68212743 | Msa0136380:CDS |
| AGTACGGCGGGAATTATTTG+AGG | 0.542860 | 1_3:-68214384 | None:intergenic |
| ACGGACCGCAAAAGAAAGCT+TGG | 0.543668 | 1_3:+68215037 | Msa0136380:CDS |
| ATTCGTTATGTGCTGAAGGA+AGG | 0.544325 | 1_3:+68212524 | Msa0136380:CDS |
| AATTCTGTTATTCAACTGCC+TGG | 0.546096 | 1_3:+68210075 | Msa0136380:CDS |
| GAATCTTTGTTTGATTCTGA+GGG | 0.547335 | 1_3:+68212553 | Msa0136380:CDS |
| AGGTAGTAATGCTTCACAGC+AGG | 0.547657 | 1_3:+68215246 | Msa0136380:CDS |
| GAACAACTGATGCGCTAGCT+CGG | 0.550645 | 1_3:-68211910 | None:intergenic |
| AGGCCATGAGGATCAATACA+TGG | 0.550655 | 1_3:+68213489 | Msa0136380:CDS |
| TATTCTGGTGAGGGCTGGAA+AGG | 0.551866 | 1_3:+68210684 | Msa0136380:CDS |
| AGAGCCAGATCTTGGTGAAG+AGG | 0.552428 | 1_3:+68213768 | Msa0136380:CDS |
| TTCGCAACATCTCCAGAAGG+TGG | 0.552717 | 1_3:-68210192 | None:intergenic |
| TTGTGGTTGTTCTTCAACAA+GGG | 0.552863 | 1_3:-68210121 | None:intergenic |
| ATACATACTCCTCCAAATCT+GGG | 0.553149 | 1_3:-68208964 | None:intergenic |
| ACAGTTCCACCTGGCGATGA+GGG | 0.553392 | 1_3:+68212889 | Msa0136380:intron |
| GAGCATCATTTATATGGATG+CGG | 0.555201 | 1_3:+68215963 | Msa0136380:three_prime_UTR |
| TTCCACCTGGCGATGAGGGT+TGG | 0.555753 | 1_3:+68212893 | Msa0136380:CDS |
| GTCAAATGCGAGTGAAACAC+GGG | 0.555777 | 1_3:+68210379 | Msa0136380:CDS |
| AGGTTCGATCTAACGTGAAA+CGG | 0.556565 | 1_3:-68209072 | None:intergenic |
| TGTTTGGTCTTCAACAAGGC+CGG | 0.559730 | 1_3:-68210262 | None:intergenic |
| AGCCAGAGAAGGAGATTCAA+CGG | 0.560164 | 1_3:+68212443 | Msa0136380:CDS |
| GGAGCATCAACTAGTTTCCC+AGG | 0.560671 | 1_3:+68215405 | Msa0136380:CDS |
| TTCATCTTCATATTCCTCGC+CGG | 0.562131 | 1_3:+68209098 | Msa0136380:five_prime_UTR |
| AGATGTGACATCATCTTGTC+CGG | 0.564545 | 1_3:-68213656 | None:intergenic |
| TCTTCAGTATCTTTAGCACC+AGG | 0.564626 | 1_3:-68213565 | None:intergenic |
| AACGGTGAGAGAGAAAGAGA+GGG | 0.567501 | 1_3:-68209054 | None:intergenic |
| AGCACCCCAAATCTTACTAC+AGG | 0.569016 | 1_3:+68211877 | Msa0136380:CDS |
| TGCTGTGAAGCATTACTACC+TGG | 0.569191 | 1_3:-68215244 | None:intergenic |
| CATCTTTGCAATCACATCCT+GGG | 0.569916 | 1_3:-68212921 | None:intergenic |
| ACATCAGTAACAGTATCAAT+CGG | 0.571296 | 1_3:-68210510 | None:intergenic |
| CTGACCGCCAAAATAACTCC+AGG | 0.571543 | 1_3:+68214344 | Msa0136380:CDS |
| TCTTCATATTCCTCGCCGGA+CGG | 0.572009 | 1_3:+68209102 | Msa0136380:five_prime_UTR |
| ATTAGTTCTCAAAACGAACC+TGG | 0.572921 | 1_3:+68210219 | Msa0136380:CDS |
| AAATGAAGACAAAAGAAAGG+AGG | 0.573526 | 1_3:+68210544 | Msa0136380:CDS |
| GACCCATGTATTGATCCTCA+TGG | 0.576189 | 1_3:-68213492 | None:intergenic |
| TCGCAGCAGGCCAGTGAAAG+CGG | 0.580172 | 1_3:+68215307 | Msa0136380:CDS |
| TCTACTTGGAGTAGCAGTGT+CGG | 0.582959 | 1_3:-68214312 | None:intergenic |
| AAACGGTGAGAGAGAAAGAG+AGG | 0.583261 | 1_3:-68209055 | None:intergenic |
| TGGTGAAGAGGATTTGACTC+CGG | 0.583636 | 1_3:+68213780 | Msa0136380:CDS |
| TGATGTCACATCTGCACCGT+TGG | 0.585319 | 1_3:+68213666 | Msa0136380:CDS |
| TGAAGCATTACTACCTGGAC+TGG | 0.585531 | 1_3:-68215239 | None:intergenic |
| GGTCAAATGCGAGTGAAACA+CGG | 0.586994 | 1_3:+68210378 | Msa0136380:CDS |
| TGTTCCTCTTGGCAGTACGG+CGG | 0.587710 | 1_3:-68214397 | None:intergenic |
| ATGGAGGATCCAAACAGAGC+TGG | 0.587853 | 1_3:-68212771 | None:intergenic |
| TTGAACTAATCATTAGTCCA+AGG | 0.588259 | 1_3:-68209875 | None:intergenic |
| GGCGAGGAATATGAAGATGA+AGG | 0.590383 | 1_3:-68209096 | None:intergenic |
| ATTGTGTTTGGTCTTCAACA+AGG | 0.590483 | 1_3:-68210266 | None:intergenic |
| TGTGATGGTGCTTGTGACCG+CGG | 0.591361 | 1_3:+68212742 | Msa0136380:CDS |
| GTTGTGGTTGTTCTTCAACA+AGG | 0.591435 | 1_3:-68210122 | None:intergenic |
| TCTTCCTTCGGAAGATTCAG+AGG | 0.592723 | 1_3:+68213513 | Msa0136380:CDS |
| CAATCCTGTAGTAAGATTTG+GGG | 0.595296 | 1_3:-68211881 | None:intergenic |
| AAGAAAATCAATATCCAGAA+CGG | 0.595382 | 1_3:+68215018 | Msa0136380:CDS |
| TGCTAAAGATGACAGTTCAT+CGG | 0.595530 | 1_3:-68213746 | None:intergenic |
| ACTGCATCACTCGTTTCACC+AGG | 0.596362 | 1_3:-68210237 | None:intergenic |
| GTGACATAGTAATCTCCGTC+CGG | 0.597495 | 1_3:-68209117 | None:intergenic |
| TTACTGTCTTCAGTTAACAA+TGG | 0.602560 | 1_3:-68212790 | None:intergenic |
| CTGTCTTCAGTTAACAATGG+AGG | 0.604628 | 1_3:-68212787 | None:intergenic |
| TCGCAGCAAGCCACTGACAG+CGG | 0.604697 | 1_3:+68215361 | Msa0136380:CDS |
| AGCCGCAGACATCTGAAGCA+GGG | 0.606461 | 1_3:+68215485 | Msa0136380:CDS |
| GTAGTTCTTAGACTTACGAA+AGG | 0.610188 | 1_3:+68209817 | Msa0136380:intron |
| AGGTGAAAACAAAGGAGAGA+CGG | 0.611195 | 1_3:+68215384 | Msa0136380:CDS |
| CAAAACACTTGAAGGATGCA+CGG | 0.611620 | 1_3:+68214460 | Msa0136380:CDS |
| ACGAAAGGCTTTGGTTGTGG+TGG | 0.611881 | 1_3:+68209832 | Msa0136380:five_prime_UTR |
| TCGTGTGAGATTGAGATCCT+CGG | 0.612290 | 1_3:+68215630 | Msa0136380:three_prime_UTR |
| AGGAATATGAAGATGAAGGA+AGG | 0.612986 | 1_3:-68209092 | None:intergenic |
| TTGTTAATAGTGATGCGACA+TGG | 0.614031 | 1_3:-68215921 | None:intergenic |
| AATGATATAATTCTCTGTGA+TGG | 0.615057 | 1_3:+68212727 | Msa0136380:CDS |
| AATCATCTGAAGGAAGTCCC+AGG | 0.615967 | 1_3:-68213354 | None:intergenic |
| CCTCCTTACATGATGAATGT+CGG | 0.617098 | 1_3:-68215216 | None:intergenic |
| TCATCCTCTGAATCTTCCGA+AGG | 0.620563 | 1_3:-68213517 | None:intergenic |
| GGATCTCAATCTCACACGAT+AGG | 0.621035 | 1_3:-68215626 | None:intergenic |
| ATTAAGGATAACATGTCCAC+CGG | 0.621242 | 1_3:+68213637 | Msa0136380:CDS |
| CGATTTCACATCTGACTCTG+AGG | 0.622480 | 1_3:+68213600 | Msa0136380:CDS |
| GAAGCAGGGCTGGTCCATAA+CGG | 0.623774 | 1_3:+68215499 | Msa0136380:CDS |
| CTAGTTTCCCAGGAGACAAG+TGG | 0.625230 | 1_3:+68215415 | Msa0136380:CDS |
| ACAACTAGCTTTAACGGTAA+CGG | 0.625737 | 1_3:-68209596 | None:intergenic |
| TGAGGGAGAGATTGATAGCG+AGG | 0.625849 | 1_3:+68212570 | Msa0136380:CDS |
| AAAATGCCAGACCAAAGTGT+TGG | 0.625899 | 1_3:+68212696 | Msa0136380:CDS |
| CAGCAAGCCACTGACAGCGG+AGG | 0.628403 | 1_3:+68215364 | Msa0136380:CDS |
| ATAGTAATCTCCGTCCGGCG+AGG | 0.629589 | 1_3:-68209112 | None:intergenic |
| TCATCGTCAGAATCATCTGA+AGG | 0.631384 | 1_3:-68213364 | None:intergenic |
| GCTGAAAATAAAGGAGATAG+GGG | 0.633536 | 1_3:+68215331 | Msa0136380:CDS |
| TGATGCTCCAGAGGATGCGA+AGG | 0.634645 | 1_3:+68213399 | Msa0136380:CDS |
| TCACAGCAGGCCAATGACAG+TGG | 0.635719 | 1_3:+68215259 | Msa0136380:CDS |
| ACAAAGTGTGCTTGGTACTG+TGG | 0.637548 | 1_3:+68209996 | Msa0136380:CDS |
| TTATAATCCTGATGCTCCAG+AGG | 0.638161 | 1_3:+68213390 | Msa0136380:CDS |
| TGTGACATCATCTTGTCCGG+TGG | 0.646990 | 1_3:-68213653 | None:intergenic |
| AAGTTCTTAACATCATCCAA+CGG | 0.647331 | 1_3:-68213682 | None:intergenic |
| CCGACATTCATCATGTAAGG+AGG | 0.650409 | 1_3:+68215216 | Msa0136380:CDS |
| TCCAAGATGATGATCATCCG+AGG | 0.651348 | 1_3:-68215647 | None:intergenic |
| GGCCATGAGGATCAATACAT+GGG | 0.661032 | 1_3:+68213490 | Msa0136380:CDS |
| GATGAGGGTTGGTTATGCCC+AGG | 0.661408 | 1_3:+68212904 | Msa0136380:CDS |
| AGTATCTTGGATCACAACCT+GGG | 0.671806 | 1_3:+68213337 | Msa0136380:CDS |
| ATTTGAGGATCCAGGCCATG+AGG | 0.675316 | 1_3:+68213477 | Msa0136380:CDS |
| GAGGATGCGAAGGTTGAAGG+AGG | 0.677573 | 1_3:+68213409 | Msa0136380:CDS |
| TGACCGCCAAAATAACTCCA+GGG | 0.677588 | 1_3:+68214345 | Msa0136380:CDS |
| AGCCCTGCTTCAGATGTCTG+CGG | 0.678843 | 1_3:-68215487 | None:intergenic |
| ATTCCCGCCGTACTGCCAAG+AGG | 0.692868 | 1_3:+68214393 | Msa0136380:CDS |
| TGGATCCTCAAATTTCTCAG+AGG | 0.694886 | 1_3:-68213467 | None:intergenic |
| AACAGAGCTGGTGATACCCG+CGG | 0.701915 | 1_3:-68212759 | None:intergenic |
| GACAGCGGAGGTGAAAACAA+AGG | 0.703274 | 1_3:+68215376 | Msa0136380:CDS |
| AACATGAAGAAGGAGAAGAA+CGG | 0.707692 | 1_3:+68208938 | Msa0136380:five_prime_UTR |
| AACCAACCCTCATCGCCAGG+TGG | 0.710395 | 1_3:-68212895 | None:intergenic |
| ACTAGCTTTAACGGTAACGG+CGG | 0.716035 | 1_3:-68209593 | None:intergenic |
| GAAGCAGCGACAGAGCTCTG+CGG | 0.763478 | 1_3:+68210451 | Msa0136380:CDS |
| TCAAATGCGAGTGAAACACG+GGG | 0.791339 | 1_3:+68210380 | Msa0136380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAACTTTTTTTATTCTA+GGG | - | chr1_3:68211057-68211076 | None:intergenic | 10.0% |
| !!! | ATGTATTTTTTTTTTTTTTG+TGG | + | chr1_3:68212364-68212383 | Msa0136380:intron | 10.0% |
| !! | CATTAAAGAATAAAATATAA+AGG | - | chr1_3:68212608-68212627 | None:intergenic | 10.0% |
| !! | TTAACATTAACACATTATAT+TGG | - | chr1_3:68209756-68209775 | None:intergenic | 15.0% |
| !!! | TTAAACTTTTTTTATTCTAG+GGG | - | chr1_3:68211056-68211075 | None:intergenic | 15.0% |
| !!! | CATTAAACTTTTTTTATTCT+AGG | - | chr1_3:68211058-68211077 | None:intergenic | 15.0% |
| !!! | TTCTTTTTACTCTAATATTT+TGG | + | chr1_3:68212074-68212093 | Msa0136380:intron | 15.0% |
| !!! | TATTTTTTTTTTTTTTGTGG+TGG | + | chr1_3:68212367-68212386 | Msa0136380:intron | 15.0% |
| !!! | TATCCAATTTTTCAAAATTT+GGG | + | chr1_3:68212631-68212650 | Msa0136380:intron | 15.0% |
| !!! | ATTTATGTATTTTTTTTCTG+CGG | + | chr1_3:68212863-68212882 | Msa0136380:intron | 15.0% |
| !! | ACAAATAATGTTATAAAAAC+AGG | + | chr1_3:68213153-68213172 | Msa0136380:intron | 15.0% |
| !! | AATATCTTTAATAACTTATG+AGG | + | chr1_3:68213994-68214013 | Msa0136380:intron | 15.0% |
| !! | AATAAAATGAAGAAAAAGAA+AGG | + | chr1_3:68215559-68215578 | Msa0136380:CDS | 15.0% |
| !! | ATAAAATGAAGAAAAAGAAA+GGG | + | chr1_3:68215560-68215579 | Msa0136380:CDS | 15.0% |
| !! | AAAAAGTTTAATGTGATCTT+AGG | + | chr1_3:68211065-68211084 | Msa0136380:intron | 20.0% |
| !!! | ACAAACACTTTTATCTTATA+CGG | + | chr1_3:68211247-68211266 | Msa0136380:intron | 20.0% |
| !! | AAGTTTCTCATGTTTATATT+TGG | - | chr1_3:68211565-68211584 | None:intergenic | 20.0% |
| !!! | GTATCCAATTTTTCAAAATT+TGG | + | chr1_3:68212630-68212649 | Msa0136380:intron | 20.0% |
| !!! | TTCTAAGAAAGAAATCAAAT+AGG | - | chr1_3:68213032-68213051 | None:intergenic | 20.0% |
| !! | TATTAGAGTTCTTTCATATT+TGG | - | chr1_3:68214099-68214118 | None:intergenic | 20.0% |
| !! | ATATACACTTGAGTATATTT+AGG | - | chr1_3:68214634-68214653 | None:intergenic | 20.0% |
| !! | TTATTCTTATAGTTTACTTG+AGG | + | chr1_3:68214704-68214723 | Msa0136380:intron | 20.0% |
| !!! | TTTTTTTTTCCGTTTAGTTA+TGG | + | chr1_3:68215821-68215840 | Msa0136380:three_prime_UTR | 20.0% |
| !! | AAAAAAAAAACATCATTTGG+TGG | - | chr1_3:68215861-68215880 | None:intergenic | 20.0% |
| !! | AGGAAAAAAAAAACATCATT+TGG | - | chr1_3:68215864-68215883 | None:intergenic | 20.0% |
| ! | AAGAAACGGTAAATTTGAAA+GGG | - | chr1_3:68209195-68209214 | None:intergenic | 25.0% |
| ! | AAAGAAACGGTAAATTTGAA+AGG | - | chr1_3:68209196-68209215 | None:intergenic | 25.0% |
| !! | TTTCTCTATGTTTCTGTTAT+GGG | + | chr1_3:68209308-68209327 | Msa0136380:intron | 25.0% |
| ! | ATGCAAGTTGTAAACAAAAT+GGG | + | chr1_3:68209348-68209367 | Msa0136380:intron | 25.0% |
| ! | ATAATTCAGACATGTAACAA+AGG | - | chr1_3:68209482-68209501 | None:intergenic | 25.0% |
| ! | TTTACATTGTCATCTTTGTT+GGG | + | chr1_3:68209637-68209656 | Msa0136380:intron | 25.0% |
| ! | TAACACATTATATTGGAGTT+TGG | - | chr1_3:68209749-68209768 | None:intergenic | 25.0% |
| ! | AGAAAGAAAGTCTAAAAACT+TGG | + | chr1_3:68210356-68210375 | Msa0136380:CDS | 25.0% |
| ! | GAAAGAAAGTCTAAAAACTT+GGG | + | chr1_3:68210357-68210376 | Msa0136380:CDS | 25.0% |
| !! | TATCGAAGAAGTATGTATTA+AGG | + | chr1_3:68210421-68210440 | Msa0136380:CDS | 25.0% |
| ! | ATGAAATGAAGACAAAAGAA+AGG | + | chr1_3:68210541-68210560 | Msa0136380:CDS | 25.0% |
| ! | AAGAAAAAGACAAGAAAAGA+GGG | + | chr1_3:68210576-68210595 | Msa0136380:CDS | 25.0% |
| !!! | GTTAGCTTGTAATCTATATT+TGG | + | chr1_3:68210745-68210764 | Msa0136380:intron | 25.0% |
| ! | TGTTTCAATTTCCACATTAA+AGG | + | chr1_3:68210826-68210845 | Msa0136380:intron | 25.0% |
| ! | ATTGTGATTGTTATCTTGTT+TGG | + | chr1_3:68210965-68210984 | Msa0136380:intron | 25.0% |
| !!! | TTGTTTGGAGTCATATTTTT+TGG | + | chr1_3:68210980-68210999 | Msa0136380:intron | 25.0% |
| ! | TTCTCATAAACAATCATCTA+GGG | - | chr1_3:68211216-68211235 | None:intergenic | 25.0% |
| ! | ATTCTCATAAACAATCATCT+AGG | - | chr1_3:68211217-68211236 | None:intergenic | 25.0% |
| !! | CAAACACTTTTATCTTATAC+GGG | + | chr1_3:68211248-68211267 | Msa0136380:intron | 25.0% |
| !! | TTTAAAAAGTGTACTTGTGT+CGG | - | chr1_3:68211355-68211374 | None:intergenic | 25.0% |
| ! | TCTCATGTTTATATTTGGAA+AGG | - | chr1_3:68211560-68211579 | None:intergenic | 25.0% |
| !! | TCTTTAATGATCCATTTTCT+TGG | + | chr1_3:68211757-68211776 | Msa0136380:intron | 25.0% |
| !! | CTTTAATGATCCATTTTCTT+GGG | + | chr1_3:68211758-68211777 | Msa0136380:intron | 25.0% |
| ! | TGCAGTATAAAAACTATACA+TGG | - | chr1_3:68212121-68212140 | None:intergenic | 25.0% |
| ! | AAAATGACAATAAAACAGAG+GGG | - | chr1_3:68212196-68212215 | None:intergenic | 25.0% |
| ! | GAAAATGACAATAAAACAGA+GGG | - | chr1_3:68212197-68212216 | None:intergenic | 25.0% |
| ! | TGAAAATGACAATAAAACAG+AGG | - | chr1_3:68212198-68212217 | None:intergenic | 25.0% |
| !! | CTGATGAATTTTGTGATATT+TGG | + | chr1_3:68212237-68212256 | Msa0136380:intron | 25.0% |
| !! | ATTGTGAAAATTTTGCAGTA+TGG | + | chr1_3:68212411-68212430 | Msa0136380:intron | 25.0% |
| !!! | ACTCCCAAATTTTGAAAAAT+TGG | - | chr1_3:68212637-68212656 | None:intergenic | 25.0% |
| ! | AATGATATAATTCTCTGTGA+TGG | + | chr1_3:68212727-68212746 | Msa0136380:CDS | 25.0% |
| !!! | ATGATAAATTACTTTGAAGC+TGG | - | chr1_3:68212845-68212864 | None:intergenic | 25.0% |
| !! | GTTAGTTGGAAAACTTTTTA+AGG | + | chr1_3:68213006-68213025 | Msa0136380:intron | 25.0% |
| !! | ATTTAAAACTGAACCTTGTT+TGG | + | chr1_3:68213073-68213092 | Msa0136380:intron | 25.0% |
| ! | GATGATGTTAAGAACTTTAA+AGG | + | chr1_3:68213688-68213707 | Msa0136380:CDS | 25.0% |
| ! | TAGACCTCATATCAAAAAAA+GGG | - | chr1_3:68213862-68213881 | None:intergenic | 25.0% |
| ! | TTAGACCTCATATCAAAAAA+AGG | - | chr1_3:68213863-68213882 | None:intergenic | 25.0% |
| ! | TAACGAAATAGTAAAGAAAC+AGG | - | chr1_3:68214066-68214085 | None:intergenic | 25.0% |
| ! | GAGGAAAAGAACAAAAAAAA+AGG | - | chr1_3:68214217-68214236 | None:intergenic | 25.0% |
| !! | ATTTTCAACTTTATGCTGAT+GGG | - | chr1_3:68214423-68214442 | None:intergenic | 25.0% |
| !! | TATTTTCAACTTTATGCTGA+TGG | - | chr1_3:68214424-68214443 | None:intergenic | 25.0% |
| ! | TAGTATGCAAATTAGAAACT+TGG | - | chr1_3:68214576-68214595 | None:intergenic | 25.0% |
| !!! | AATTGCAGAAGTGATTTTTT+GGG | + | chr1_3:68214663-68214682 | Msa0136380:intron | 25.0% |
| !! | TTTTTACTGCACATAATAAC+TGG | + | chr1_3:68214796-68214815 | Msa0136380:intron | 25.0% |
| ! | AAGAAAATCAATATCCAGAA+CGG | + | chr1_3:68215018-68215037 | Msa0136380:CDS | 25.0% |
| !!! | CTTTTAAAAAGTAGCTATTC+AGG | + | chr1_3:68215720-68215739 | Msa0136380:three_prime_UTR | 25.0% |
| !!! | ATTTTTAAGTGTTTGCATGA+GGG | - | chr1_3:68215777-68215796 | None:intergenic | 25.0% |
| !!! | TATTTTTAAGTGTTTGCATG+AGG | - | chr1_3:68215778-68215797 | None:intergenic | 25.0% |
| ! | TAATGTGAGCATCATTTATA+TGG | + | chr1_3:68215957-68215976 | Msa0136380:three_prime_UTR | 25.0% |
| AATCTATGGAACGAAAGAAA+CGG | - | chr1_3:68209209-68209228 | None:intergenic | 30.0% | |
| ! | GTTTCTCTATGTTTCTGTTA+TGG | + | chr1_3:68209307-68209326 | Msa0136380:intron | 30.0% |
| ! | TTCTCTATGTTTCTGTTATG+GGG | + | chr1_3:68209309-68209328 | Msa0136380:intron | 30.0% |
| CATGCAAGTTGTAAACAAAA+TGG | + | chr1_3:68209347-68209366 | Msa0136380:intron | 30.0% | |
| ! | ACTACTTGATAATTAGCTTG+CGG | + | chr1_3:68209382-68209401 | Msa0136380:intron | 30.0% |
| !! | TCTTTTGCTTACTTTGTTGT+TGG | + | chr1_3:68209501-68209520 | Msa0136380:intron | 30.0% |
| CTTTACATTGTCATCTTTGT+TGG | + | chr1_3:68209636-68209655 | Msa0136380:intron | 30.0% | |
| TTGAACTAATCATTAGTCCA+AGG | - | chr1_3:68209878-68209897 | None:intergenic | 30.0% | |
| TCTGAAAAAACAGTTCAGAT+TGG | + | chr1_3:68209952-68209971 | Msa0136380:CDS | 30.0% | |
| CTGAAAAAACAGTTCAGATT+GGG | + | chr1_3:68209953-68209972 | Msa0136380:CDS | 30.0% | |
| ! | TTTTTCATCGATAGCAGAAT+CGG | - | chr1_3:68210025-68210044 | None:intergenic | 30.0% |
| ! | GAATTTGATTTCACTTGAAC+AGG | - | chr1_3:68210153-68210172 | None:intergenic | 30.0% |
| AAGTATGTATTAAGGTCGTT+AGG | + | chr1_3:68210429-68210448 | Msa0136380:CDS | 30.0% | |
| ACATCAGTAACAGTATCAAT+CGG | - | chr1_3:68210513-68210532 | None:intergenic | 30.0% | |
| AAATGAAGACAAAAGAAAGG+AGG | + | chr1_3:68210544-68210563 | Msa0136380:CDS | 30.0% | |
| GAAGAAAAAGACAAGAAAAG+AGG | + | chr1_3:68210575-68210594 | Msa0136380:CDS | 30.0% | |
| ! | AGTTTTGCTCATAGCTTATT+CGG | - | chr1_3:68210653-68210672 | None:intergenic | 30.0% |
| AACTTGATTGATGCTTATTC+TGG | + | chr1_3:68210669-68210688 | Msa0136380:CDS | 30.0% | |
| CTAACGAAATCACAAAGTAA+TGG | - | chr1_3:68210730-68210749 | None:intergenic | 30.0% | |
| GCTAAGGTCAAAAATAAATC+AGG | - | chr1_3:68210779-68210798 | None:intergenic | 30.0% | |
| !! | TATTTTTGACCTTAGCTCAT+TGG | + | chr1_3:68210783-68210802 | Msa0136380:intron | 30.0% |
| ! | ATTTTTGACCTTAGCTCATT+GGG | + | chr1_3:68210784-68210803 | Msa0136380:intron | 30.0% |
| TGATGTTAACTCCTTTAATG+TGG | - | chr1_3:68210840-68210859 | None:intergenic | 30.0% | |
| GGAGTTAACATCAATTCTAT+TGG | + | chr1_3:68210847-68210866 | Msa0136380:intron | 30.0% | |
| GCAATCATTCAACTTGTAAA+AGG | - | chr1_3:68210919-68210938 | None:intergenic | 30.0% | |
| GTGATCTTAGGTATTTGAAT+TGG | + | chr1_3:68211077-68211096 | Msa0136380:intron | 30.0% | |
| ! | GGATACTATACTGGTTATTT+AGG | - | chr1_3:68211194-68211213 | None:intergenic | 30.0% |
| TCTCATAAACAATCATCTAG+GGG | - | chr1_3:68211215-68211234 | None:intergenic | 30.0% | |
| !!! | TGTGCTTTTTCAAATCACTT+TGG | + | chr1_3:68211271-68211290 | Msa0136380:intron | 30.0% |
| ATATGTAAGCTAGCACAATT+AGG | + | chr1_3:68211418-68211437 | Msa0136380:intron | 30.0% | |
| ! | TTCAAATGAACCTTGCTATA+TGG | - | chr1_3:68211489-68211508 | None:intergenic | 30.0% |
| AGTAAAGGTAAATCCAAACA+TGG | - | chr1_3:68211652-68211671 | None:intergenic | 30.0% | |
| ATTTACCTTTACTGACCATT+TGG | + | chr1_3:68211659-68211678 | Msa0136380:intron | 30.0% | |
| AAAATCCAAATGGTCAGTAA+AGG | - | chr1_3:68211667-68211686 | None:intergenic | 30.0% | |
| CAGCTAAGATAAAATCCAAA+TGG | - | chr1_3:68211677-68211696 | None:intergenic | 30.0% | |
| ! | TACAAAATTGCATTTGGTGA+TGG | - | chr1_3:68211723-68211742 | None:intergenic | 30.0% |
| ! | ATCACCAAATGCAATTTTGT+AGG | + | chr1_3:68211722-68211741 | Msa0136380:intron | 30.0% |
| GAATCCTACAAAATTGCATT+TGG | - | chr1_3:68211729-68211748 | None:intergenic | 30.0% | |
| TTAAATGGATCCCAAGAAAA+TGG | - | chr1_3:68211771-68211790 | None:intergenic | 30.0% | |
| TTAAGCCAATTTGGTAAAAC+GGG | - | chr1_3:68211840-68211859 | None:intergenic | 30.0% | |
| CTTAAGCCAATTTGGTAAAA+CGG | - | chr1_3:68211841-68211860 | None:intergenic | 30.0% | |
| TCAATCCTGTAGTAAGATTT+GGG | - | chr1_3:68211885-68211904 | None:intergenic | 30.0% | |
| TTCAATCCTGTAGTAAGATT+TGG | - | chr1_3:68211886-68211905 | None:intergenic | 30.0% | |
| CAGGGATCTATTTCAAAATT+TGG | + | chr1_3:68212501-68212520 | Msa0136380:CDS | 30.0% | |
| TCAGAATCAAACAAAGATTC+AGG | - | chr1_3:68212553-68212572 | None:intergenic | 30.0% | |
| ! | TGAATCTTTGTTTGATTCTG+AGG | + | chr1_3:68212552-68212571 | Msa0136380:CDS | 30.0% |
| ! | GAATCTTTGTTTGATTCTGA+GGG | + | chr1_3:68212553-68212572 | Msa0136380:CDS | 30.0% |
| ATTATTAGTAGCCAACACTT+TGG | - | chr1_3:68212710-68212729 | None:intergenic | 30.0% | |
| TTACTGTCTTCAGTTAACAA+TGG | - | chr1_3:68212793-68212812 | None:intergenic | 30.0% | |
| TAACTGAAGACAGTAATATC+TGG | + | chr1_3:68212797-68212816 | Msa0136380:intron | 30.0% | |
| !! | AACTTGTTAACGACTTGTTA+GGG | + | chr1_3:68212953-68212972 | Msa0136380:intron | 30.0% |
| CAAAACAAGTAAACCAAACA+AGG | - | chr1_3:68213089-68213108 | None:intergenic | 30.0% | |
| AAGTTCTTAACATCATCCAA+CGG | - | chr1_3:68213685-68213704 | None:intergenic | 30.0% | |
| !!! | AAGTCCCTTTTTTTGATATG+AGG | + | chr1_3:68213855-68213874 | Msa0136380:intron | 30.0% |
| ATATTCTAACTGTATCAGAG+TGG | + | chr1_3:68214026-68214045 | Msa0136380:intron | 30.0% | |
| AGTTCATACTGTTGGAAAAA+TGG | - | chr1_3:68214151-68214170 | None:intergenic | 30.0% | |
| ! | ACACAGCTGTCTAAAATATT+GGG | - | chr1_3:68214241-68214260 | None:intergenic | 30.0% |
| ! | AACACAGCTGTCTAAAATAT+TGG | - | chr1_3:68214242-68214261 | None:intergenic | 30.0% |
| ! | ATACTAGTGATGATGAAGAT+TGG | + | chr1_3:68214288-68214307 | Msa0136380:CDS | 30.0% |
| ! | TACTAGTGATGATGAAGATT+GGG | + | chr1_3:68214289-68214308 | Msa0136380:CDS | 30.0% |
| !!! | GTCAGTTTCTTTTTTCTACT+TGG | - | chr1_3:68214329-68214348 | None:intergenic | 30.0% |
| GGATCTTCATACAATAAACT+TGG | + | chr1_3:68214500-68214519 | Msa0136380:CDS | 30.0% | |
| ! | GTGATTGTTAAGTTCTGTTT+TGG | + | chr1_3:68214539-68214558 | Msa0136380:intron | 30.0% |
| TGCATACTAATATTCCCTTT+CGG | + | chr1_3:68214587-68214606 | Msa0136380:intron | 30.0% | |
| AATTGAATGATAGACCGAAA+GGG | - | chr1_3:68214604-68214623 | None:intergenic | 30.0% | |
| AAATTGAATGATAGACCGAA+AGG | - | chr1_3:68214605-68214624 | None:intergenic | 30.0% | |
| !!! | GAATTGCAGAAGTGATTTTT+TGG | + | chr1_3:68214662-68214681 | Msa0136380:intron | 30.0% |
| !!! | ATTGCAGAAGTGATTTTTTG+GGG | + | chr1_3:68214664-68214683 | Msa0136380:intron | 30.0% |
| TATAGTTTACTTGAGGTAGA+AGG | + | chr1_3:68214711-68214730 | Msa0136380:intron | 30.0% | |
| ATAACTGTTATTCCTGCAAA+AGG | - | chr1_3:68214823-68214842 | None:intergenic | 30.0% | |
| TTTCCATTCAAAAGGAGATT+AGG | + | chr1_3:68214898-68214917 | Msa0136380:intron | 30.0% | |
| ATACAAGAATAGTCACTCTA+AGG | - | chr1_3:68214973-68214992 | None:intergenic | 30.0% | |
| !!! | TGTTTTTAGCATTGCTCTTA+TGG | + | chr1_3:68215099-68215118 | Msa0136380:intron | 30.0% |
| AACCATTTGTCAACCTATAA+GGG | - | chr1_3:68215175-68215194 | None:intergenic | 30.0% | |
| AAACCATTTGTCAACCTATA+AGG | - | chr1_3:68215176-68215195 | None:intergenic | 30.0% | |
| ! | TTATAGGTTGACAAATGGTT+TGG | + | chr1_3:68215175-68215194 | Msa0136380:intron | 30.0% |
| AGCTGAAAATAAAGGAGATA+GGG | + | chr1_3:68215282-68215301 | Msa0136380:CDS | 30.0% | |
| ! | GACTTAATTTCCTTTTCGTA+AGG | + | chr1_3:68215587-68215606 | Msa0136380:exon | 30.0% |
| !!! | TTTTTAAGTGTTTGCATGAG+GGG | - | chr1_3:68215776-68215795 | None:intergenic | 30.0% |
| ATAAGGTCTCCATAACTAAA+CGG | - | chr1_3:68215833-68215852 | None:intergenic | 30.0% | |
| ! | ATCATTTGGTGGAAACAATA+AGG | - | chr1_3:68215850-68215869 | None:intergenic | 30.0% |
| TTGAAGCTTGAGATACTAAA+AGG | - | chr1_3:68215884-68215903 | None:intergenic | 30.0% | |
| ! | TTTATATGGATGCGGATTAA+AGG | + | chr1_3:68215971-68215990 | Msa0136380:three_prime_UTR | 30.0% |
| TCTTCTCCTTCTTCATGTTA+GGG | - | chr1_3:68208937-68208956 | None:intergenic | 35.0% | |
| TTCTTCTCCTTCTTCATGTT+AGG | - | chr1_3:68208938-68208957 | None:intergenic | 35.0% | |
| AACATGAAGAAGGAGAAGAA+CGG | + | chr1_3:68208938-68208957 | Msa0136380:five_prime_UTR | 35.0% | |
| ATACATACTCCTCCAAATCT+GGG | - | chr1_3:68208967-68208986 | None:intergenic | 35.0% | |
| TATACATACTCCTCCAAATC+TGG | - | chr1_3:68208968-68208987 | None:intergenic | 35.0% | |
| AGGAATATGAAGATGAAGGA+AGG | - | chr1_3:68209095-68209114 | None:intergenic | 35.0% | |
| AATTTGAAAGGGAAAGGGAA+AGG | - | chr1_3:68209184-68209203 | None:intergenic | 35.0% | |
| CGGTAAATTTGAAAGGGAAA+GGG | - | chr1_3:68209189-68209208 | None:intergenic | 35.0% | |
| ACGGTAAATTTGAAAGGGAA+AGG | - | chr1_3:68209190-68209209 | None:intergenic | 35.0% | |
| !! | ACAACTAGCTTTAACGGTAA+CGG | - | chr1_3:68209599-68209618 | None:intergenic | 35.0% |
| GTAGTTCTTAGACTTACGAA+AGG | + | chr1_3:68209817-68209836 | Msa0136380:intron | 35.0% | |
| ! | GGACTAATGATTAGTTCAAC+TGG | + | chr1_3:68209879-68209898 | Msa0136380:five_prime_UTR | 35.0% |
| TTCTCAGTCGTAAAATCGTT+GGG | - | chr1_3:68209918-68209937 | None:intergenic | 35.0% | |
| ! | GATTTTACGACTGAGAAGAT+AGG | + | chr1_3:68209921-68209940 | Msa0136380:five_prime_UTR | 35.0% |
| AATTCTGTTATTCAACTGCC+TGG | + | chr1_3:68210075-68210094 | Msa0136380:CDS | 35.0% | |
| TTGTGGTTGTTCTTCAACAA+GGG | - | chr1_3:68210124-68210143 | None:intergenic | 35.0% | |
| TGATTTCACTTGAACAGGAA+CGG | - | chr1_3:68210148-68210167 | None:intergenic | 35.0% | |
| AAATTCTGTGAATGAGCTAC+TGG | + | chr1_3:68210167-68210186 | Msa0136380:CDS | 35.0% | |
| ! | ATTAGTTCTCAAAACGAACC+TGG | + | chr1_3:68210219-68210238 | Msa0136380:CDS | 35.0% |
| ! | ATTGTGTTTGGTCTTCAACA+AGG | - | chr1_3:68210269-68210288 | None:intergenic | 35.0% |
| CAAGTGAAAACAGAATCTTC+TGG | + | chr1_3:68210300-68210319 | Msa0136380:CDS | 35.0% | |
| AGTAATATCTCAGTTGAGCT+CGG | - | chr1_3:68210626-68210645 | None:intergenic | 35.0% | |
| ATTGATGCTTATTCTGGTGA+GGG | + | chr1_3:68210675-68210694 | Msa0136380:CDS | 35.0% | |
| TAAATTCTCCCAATGAGCTA+AGG | - | chr1_3:68210795-68210814 | None:intergenic | 35.0% | |
| TAATTGCTTGCCAACTGAAA+TGG | + | chr1_3:68210871-68210890 | Msa0136380:intron | 35.0% | |
| AGATGTAGTTCCATTTCAGT+TGG | - | chr1_3:68210884-68210903 | None:intergenic | 35.0% | |
| AACTGAAATGGAACTACATC+TGG | + | chr1_3:68210883-68210902 | Msa0136380:intron | 35.0% | |
| ! | GAACTACATCTGGAATATTC+TGG | + | chr1_3:68210893-68210912 | Msa0136380:intron | 35.0% |
| TCACAATATTCCAACACATG+CGG | - | chr1_3:68210952-68210971 | None:intergenic | 35.0% | |
| TCTAGTACATGATCAGAACA+TGG | - | chr1_3:68211019-68211038 | None:intergenic | 35.0% | |
| AGGTTCATTTGAATTTGACG+TGG | + | chr1_3:68211496-68211515 | Msa0136380:intron | 35.0% | |
| TTCTTGGGATCCATTTAATC+TGG | + | chr1_3:68211773-68211792 | Msa0136380:intron | 35.0% | |
| !! | CGTTTTACCAAATTGGCTTA+AGG | + | chr1_3:68211839-68211858 | Msa0136380:CDS | 35.0% |
| AATTTCGCCTTAAGCCAATT+TGG | - | chr1_3:68211849-68211868 | None:intergenic | 35.0% | |
| CAATCCTGTAGTAAGATTTG+GGG | - | chr1_3:68211884-68211903 | None:intergenic | 35.0% | |
| AAATAAGATGTGGCATACAC+GGG | - | chr1_3:68211945-68211964 | None:intergenic | 35.0% | |
| CAAATAAGATGTGGCATACA+CGG | - | chr1_3:68211946-68211965 | None:intergenic | 35.0% | |
| CGAACAACACAAATAAGATG+TGG | - | chr1_3:68211955-68211974 | None:intergenic | 35.0% | |
| ! | TTTGTGCCACATCTTATTTG+TGG | + | chr1_3:68212040-68212059 | Msa0136380:intron | 35.0% |
| TGAATGCCACAAATAAGATG+TGG | - | chr1_3:68212049-68212068 | None:intergenic | 35.0% | |
| AATAAAACAGAGGGGAAGAA+TGG | - | chr1_3:68212188-68212207 | None:intergenic | 35.0% | |
| GGAAAAATTAAAGCCAGAGA+AGG | + | chr1_3:68212432-68212451 | Msa0136380:CDS | 35.0% | |
| ! | TAATTTGCGTCGCAGAATTT+CGG | - | chr1_3:68212476-68212495 | None:intergenic | 35.0% |
| TGCGACGCAAATTAAAAATC+AGG | + | chr1_3:68212482-68212501 | Msa0136380:CDS | 35.0% | |
| GCGACGCAAATTAAAAATCA+GGG | + | chr1_3:68212483-68212502 | Msa0136380:CDS | 35.0% | |
| GGAGTGATCAATTAATCAAG+TGG | - | chr1_3:68212824-68212843 | None:intergenic | 35.0% | |
| !! | GAACTTGTTAACGACTTGTT+AGG | + | chr1_3:68212952-68212971 | Msa0136380:intron | 35.0% |
| GATAAGTCACATAATCAGGA+GGG | - | chr1_3:68213275-68213294 | None:intergenic | 35.0% | |
| CAAGGATAAGTCACATAATC+AGG | - | chr1_3:68213279-68213298 | None:intergenic | 35.0% | |
| ATTAAGGATAACATGTCCAC+CGG | + | chr1_3:68213637-68213656 | Msa0136380:CDS | 35.0% | |
| TGCTAAAGATGACAGTTCAT+CGG | - | chr1_3:68213749-68213768 | None:intergenic | 35.0% | |
| ! | ACATTTCTTTTCCCAGAAAC+CGG | - | chr1_3:68213802-68213821 | None:intergenic | 35.0% |
| CTGGGAAAAGAAATGTTGAA+AGG | + | chr1_3:68213806-68213825 | Msa0136380:CDS | 35.0% | |
| GAAAAGAAATGTTGAAAGGC+TGG | + | chr1_3:68213810-68213829 | Msa0136380:CDS | 35.0% | |
| ! | GACTTACTTCATACAGCTTT+TGG | - | chr1_3:68213840-68213859 | None:intergenic | 35.0% |
| ATGCTGTAAGTTGTATGTGT+TGG | + | chr1_3:68213962-68213981 | Msa0136380:intron | 35.0% | |
| AAGTCTTGAGTTCATACTGT+TGG | - | chr1_3:68214159-68214178 | None:intergenic | 35.0% | |
| TGAACTCAAGACTTCATTAG+TGG | + | chr1_3:68214165-68214184 | Msa0136380:intron | 35.0% | |
| GAACTCAAGACTTCATTAGT+GGG | + | chr1_3:68214166-68214185 | Msa0136380:intron | 35.0% | |
| CATCATCACTAGTATCACTA+TGG | - | chr1_3:68214283-68214302 | None:intergenic | 35.0% | |
| ! | TTATTTGAGGCGTTTCCATT+TGG | - | chr1_3:68214374-68214393 | None:intergenic | 35.0% |
| !!! | TTGCAGAAGTGATTTTTTGG+GGG | + | chr1_3:68214665-68214684 | Msa0136380:intron | 35.0% |
| ! | ATAATAACTGGTCCTTTTGC+AGG | + | chr1_3:68214808-68214827 | Msa0136380:intron | 35.0% |
| AGTGTTTGTGCAGTAAATCA+GGG | - | chr1_3:68214849-68214868 | None:intergenic | 35.0% | |
| TCTCTCTCTTTCCATTCAAA+AGG | + | chr1_3:68214890-68214909 | Msa0136380:intron | 35.0% | |
| AATGGTTAACTCAGAGTCAT+GGG | - | chr1_3:68215145-68215164 | None:intergenic | 35.0% | |
| ! | ACCATTCTTTTCTCCCTTAT+AGG | + | chr1_3:68215159-68215178 | Msa0136380:intron | 35.0% |
| ACCTATAAGGGAGAAAAGAA+TGG | - | chr1_3:68215163-68215182 | None:intergenic | 35.0% | |
| GAGCTGAAAATAAAGGAGAT+AGG | + | chr1_3:68215281-68215300 | Msa0136380:CDS | 35.0% | |
| GCTGAAAATAAAGGAGATAG+GGG | + | chr1_3:68215331-68215350 | Msa0136380:CDS | 35.0% | |
| AATCAAAGATTGAGCCGTTA+TGG | - | chr1_3:68215516-68215535 | None:intergenic | 35.0% | |
| CTCAATCTTTGATTGCTTAC+CGG | + | chr1_3:68215522-68215541 | Msa0136380:CDS | 35.0% | |
| AATCTTGCTACCTTACGAAA+AGG | - | chr1_3:68215600-68215619 | None:intergenic | 35.0% | |
| TGGATCTCAAACGATATTCT+TGG | + | chr1_3:68215666-68215685 | Msa0136380:three_prime_UTR | 35.0% | |
| ATCTCAAACGATATTCTTGG+AGG | + | chr1_3:68215669-68215688 | Msa0136380:three_prime_UTR | 35.0% | |
| ! | TAGTTGTCAGTTAGCAGTTT+TGG | + | chr1_3:68215796-68215815 | Msa0136380:three_prime_UTR | 35.0% |
| TTGTTAATAGTGATGCGACA+TGG | - | chr1_3:68215924-68215943 | None:intergenic | 35.0% | |
| GAGCATCATTTATATGGATG+CGG | + | chr1_3:68215963-68215982 | Msa0136380:three_prime_UTR | 35.0% | |
| AGGTTCGATCTAACGTGAAA+CGG | - | chr1_3:68209075-68209094 | None:intergenic | 40.0% | |
| TTCATCTTCATATTCCTCGC+CGG | + | chr1_3:68209098-68209117 | Msa0136380:five_prime_UTR | 40.0% | |
| AGGAAGTGGTGTGAAAGAAA+AGG | - | chr1_3:68209164-68209183 | None:intergenic | 40.0% | |
| AGAGAAGCAGAAGGAATCTA+TGG | - | chr1_3:68209223-68209242 | None:intergenic | 40.0% | |
| GCAAGAAAAAGAGAAGCAGA+AGG | - | chr1_3:68209232-68209251 | None:intergenic | 40.0% | |
| !! | CCAGGTACAACTAGCTTTAA+CGG | - | chr1_3:68209605-68209624 | None:intergenic | 40.0% |
| TGTAAAGAACAAAGCTCACC+AGG | - | chr1_3:68209623-68209642 | None:intergenic | 40.0% | |
| CTTAGACTTACGAAAGGCTT+TGG | + | chr1_3:68209823-68209842 | Msa0136380:five_prime_UTR | 40.0% | |
| TTGTGTGATGTGTGTTTCCT+TGG | + | chr1_3:68209858-68209877 | Msa0136380:five_prime_UTR | 40.0% | |
| CTTCTCAGTCGTAAAATCGT+TGG | - | chr1_3:68209919-68209938 | None:intergenic | 40.0% | |
| GTTGTGGTTGTTCTTCAACA+AGG | - | chr1_3:68210125-68210144 | None:intergenic | 40.0% | |
| GATTTCACTTGAACAGGAAC+GGG | - | chr1_3:68210147-68210166 | None:intergenic | 40.0% | |
| ! | TTTTTCGCAACATCTCCAGA+AGG | - | chr1_3:68210198-68210217 | None:intergenic | 40.0% |
| ! | GATTCTGTTTTCACTTGAGC+AGG | - | chr1_3:68210297-68210316 | None:intergenic | 40.0% |
| ! | TCAATCGGTTCAGGATCTTT+AGG | - | chr1_3:68210498-68210517 | None:intergenic | 40.0% |
| ! | GTAACAGTATCAATCGGTTC+AGG | - | chr1_3:68210507-68210526 | None:intergenic | 40.0% |
| GATTGATGCTTATTCTGGTG+AGG | + | chr1_3:68210674-68210693 | Msa0136380:CDS | 40.0% | |
| CTCATTGGGAGAATTTAGAG+CGG | + | chr1_3:68210798-68210817 | Msa0136380:intron | 40.0% | |
| AAGTCTATAACCGCATGTGT+TGG | + | chr1_3:68210939-68210958 | Msa0136380:intron | 40.0% | |
| AGTACACGAGAACAAATTCG+TGG | + | chr1_3:68211110-68211129 | Msa0136380:intron | 40.0% | |
| GTACACGAGAACAAATTCGT+GGG | + | chr1_3:68211111-68211130 | Msa0136380:intron | 40.0% | |
| TCATCTAGGGGATACTATAC+TGG | - | chr1_3:68211203-68211222 | None:intergenic | 40.0% | |
| !! | TCAAATCACTTTGGCTTGCA+TGG | + | chr1_3:68211280-68211299 | Msa0136380:intron | 40.0% |
| TCAAACGGTGAGTGTATACA+TGG | + | chr1_3:68211321-68211340 | Msa0136380:intron | 40.0% | |
| CAAACGGTGAGTGTATACAT+GGG | + | chr1_3:68211322-68211341 | Msa0136380:intron | 40.0% | |
| AAACGGTGAGTGTATACATG+GGG | + | chr1_3:68211323-68211342 | Msa0136380:intron | 40.0% | |
| AACTCTCGTACCATATAGCA+AGG | + | chr1_3:68211476-68211495 | Msa0136380:intron | 40.0% | |
| ! | AGAATGCATCGATCCATGTT+TGG | + | chr1_3:68211636-68211655 | Msa0136380:intron | 40.0% |
| CAACAAGGGACCAGATTAAA+TGG | - | chr1_3:68211786-68211805 | None:intergenic | 40.0% | |
| GGCTCAGATTAAATGGCAAA+AGG | - | chr1_3:68211814-68211833 | None:intergenic | 40.0% | |
| TTGGATTCGTTATGTGCTGA+AGG | + | chr1_3:68212520-68212539 | Msa0136380:CDS | 40.0% | |
| ATTCGTTATGTGCTGAAGGA+AGG | + | chr1_3:68212524-68212543 | Msa0136380:CDS | 40.0% | |
| AAAATGCCAGACCAAAGTGT+TGG | + | chr1_3:68212696-68212715 | Msa0136380:CDS | 40.0% | |
| CTGTCTTCAGTTAACAATGG+AGG | - | chr1_3:68212790-68212809 | None:intergenic | 40.0% | |
| CATCTTTGCAATCACATCCT+GGG | - | chr1_3:68212924-68212943 | None:intergenic | 40.0% | |
| TCATCTTTGCAATCACATCC+TGG | - | chr1_3:68212925-68212944 | None:intergenic | 40.0% | |
| !! | TCTCTCTCTTACTGATTCCT+GGG | + | chr1_3:68212981-68213000 | Msa0136380:intron | 40.0% |
| GGATAAGTCACATAATCAGG+AGG | - | chr1_3:68213276-68213295 | None:intergenic | 40.0% | |
| TGTGACTTATCCTTGTTCAG+AGG | + | chr1_3:68213284-68213303 | Msa0136380:intron | 40.0% | |
| GTGACTTATCCTTGTTCAGA+GGG | + | chr1_3:68213285-68213304 | Msa0136380:intron | 40.0% | |
| AAGTATCTTGGATCACAACC+TGG | + | chr1_3:68213336-68213355 | Msa0136380:CDS | 40.0% | |
| AGTATCTTGGATCACAACCT+GGG | + | chr1_3:68213337-68213356 | Msa0136380:CDS | 40.0% | |
| TCATCGTCAGAATCATCTGA+AGG | - | chr1_3:68213367-68213386 | None:intergenic | 40.0% | |
| TTATAATCCTGATGCTCCAG+AGG | + | chr1_3:68213390-68213409 | Msa0136380:CDS | 40.0% | |
| ! | ATCTGCCTCTGAGAAATTTG+AGG | + | chr1_3:68213462-68213481 | Msa0136380:CDS | 40.0% |
| TGGATCCTCAAATTTCTCAG+AGG | - | chr1_3:68213470-68213489 | None:intergenic | 40.0% | |
| TCTGAGAAATTTGAGGATCC+AGG | + | chr1_3:68213469-68213488 | Msa0136380:CDS | 40.0% | |
| TCAATACATGGGTCTTCCTT+CGG | + | chr1_3:68213501-68213520 | Msa0136380:CDS | 40.0% | |
| GTATCTTTAGCACCAGGATT+GGG | - | chr1_3:68213562-68213581 | None:intergenic | 40.0% | |
| AGTATCTTTAGCACCAGGAT+TGG | - | chr1_3:68213563-68213582 | None:intergenic | 40.0% | |
| TCTTCAGTATCTTTAGCACC+AGG | - | chr1_3:68213568-68213587 | None:intergenic | 40.0% | |
| CTCAGAGTCAGATGTGAAAT+CGG | - | chr1_3:68213602-68213621 | None:intergenic | 40.0% | |
| GGATCTTGCTGCTACAATTA+AGG | + | chr1_3:68213621-68213640 | Msa0136380:CDS | 40.0% | |
| AGATGTGACATCATCTTGTC+CGG | - | chr1_3:68213659-68213678 | None:intergenic | 40.0% | |
| CGGTTATAGATGGCTTCTTA+CGG | - | chr1_3:68213729-68213748 | None:intergenic | 40.0% | |
| ! | GACAGTTCATCGGTTATAGA+TGG | - | chr1_3:68213739-68213758 | None:intergenic | 40.0% |
| AAATCCTCTTCACCAAGATC+TGG | - | chr1_3:68213775-68213794 | None:intergenic | 40.0% | |
| GTACTCCGATCTTATATGCA+TGG | + | chr1_3:68213889-68213908 | Msa0136380:intron | 40.0% | |
| GCAGACCATGCATATAAGAT+CGG | - | chr1_3:68213897-68213916 | None:intergenic | 40.0% | |
| ! | GCTGTCTAAAATATTGGGAG+AGG | - | chr1_3:68214236-68214255 | None:intergenic | 40.0% |
| TATGGTATGTCTCCTGCAAT+AGG | - | chr1_3:68214265-68214284 | None:intergenic | 40.0% | |
| !!! | CATCCTTCAAGTGTTTTGGT+GGG | - | chr1_3:68214458-68214477 | None:intergenic | 40.0% |
| CAAAACACTTGAAGGATGCA+CGG | + | chr1_3:68214460-68214479 | Msa0136380:CDS | 40.0% | |
| ACGGAATCTGGTAAAAAACG+TGG | + | chr1_3:68214479-68214498 | Msa0136380:CDS | 40.0% | |
| !!! | TGCAGAAGTGATTTTTTGGG+GGG | + | chr1_3:68214666-68214685 | Msa0136380:intron | 40.0% |
| GAGTGTTTGTGCAGTAAATC+AGG | - | chr1_3:68214850-68214869 | None:intergenic | 40.0% | |
| ! | GTGCCTAATCTCCTTTTGAA+TGG | - | chr1_3:68214904-68214923 | None:intergenic | 40.0% |
| CTCAACATGCATGCAAGTAT+GGG | - | chr1_3:68214934-68214953 | None:intergenic | 40.0% | |
| TTGCATGCATGTTGAGGTAA+AGG | + | chr1_3:68214938-68214957 | Msa0136380:intron | 40.0% | |
| TGCATGCATGTTGAGGTAAA+GGG | + | chr1_3:68214939-68214958 | Msa0136380:intron | 40.0% | |
| GAATGGTTAACTCAGAGTCA+TGG | - | chr1_3:68215146-68215165 | None:intergenic | 40.0% | |
| ! | CTCCCTTATAGGTTGACAAA+TGG | + | chr1_3:68215170-68215189 | Msa0136380:intron | 40.0% |
| ! | AATGGTTTGGCAATTCTCGT+TGG | + | chr1_3:68215188-68215207 | Msa0136380:CDS | 40.0% |
| GTTCCGACATTCATCATGTA+AGG | + | chr1_3:68215213-68215232 | Msa0136380:CDS | 40.0% | |
| CCTCCTTACATGATGAATGT+CGG | - | chr1_3:68215219-68215238 | None:intergenic | 40.0% | |
| ! | ATTTTCAGCTCCACTGTCAT+TGG | - | chr1_3:68215272-68215291 | None:intergenic | 40.0% |
| GACAGTGGAGCTGAAAATAA+AGG | + | chr1_3:68215274-68215293 | Msa0136380:CDS | 40.0% | |
| GAAAGCGGAGCTGAAAATAA+AGG | + | chr1_3:68215322-68215341 | Msa0136380:CDS | 40.0% | |
| AGGTGAAAACAAAGGAGAGA+CGG | + | chr1_3:68215384-68215403 | Msa0136380:CDS | 40.0% | |
| ! | TTTTTCTCCACTTGTCTCCT+GGG | - | chr1_3:68215425-68215444 | None:intergenic | 40.0% |
| ! | ATTTTTCTCCACTTGTCTCC+TGG | - | chr1_3:68215426-68215445 | None:intergenic | 40.0% |
| !!! | GCACCGCTTTTTTCTCACAT+TGG | + | chr1_3:68208994-68209013 | Msa0136380:five_prime_UTR | 45.0% |
| GCGCCAATGTGAGAAAAAAG+CGG | - | chr1_3:68209000-68209019 | None:intergenic | 45.0% | |
| AACGGTGAGAGAGAAAGAGA+GGG | - | chr1_3:68209057-68209076 | None:intergenic | 45.0% | |
| AAACGGTGAGAGAGAAAGAG+AGG | - | chr1_3:68209058-68209077 | None:intergenic | 45.0% | |
| GGCGAGGAATATGAAGATGA+AGG | - | chr1_3:68209099-68209118 | None:intergenic | 45.0% | |
| GTGACATAGTAATCTCCGTC+CGG | - | chr1_3:68209120-68209139 | None:intergenic | 45.0% | |
| AAAGGGAAAGGGAAAGGAAG+TGG | - | chr1_3:68209178-68209197 | None:intergenic | 45.0% | |
| ! | GTGAGAAGCACGAACTAAGA+CGG | - | chr1_3:68209286-68209305 | None:intergenic | 45.0% |
| !! | ACTAGCTTTAACGGTAACGG+CGG | - | chr1_3:68209596-68209615 | None:intergenic | 45.0% |
| CCGTTAAAGCTAGTTGTACC+TGG | + | chr1_3:68209602-68209621 | Msa0136380:five_prime_UTR | 45.0% | |
| ! | CTTACGAAAGGCTTTGGTTG+TGG | + | chr1_3:68209829-68209848 | Msa0136380:five_prime_UTR | 45.0% |
| GACAGAGAACAAAGTGTGCT+TGG | + | chr1_3:68209988-68210007 | Msa0136380:CDS | 45.0% | |
| ACAAAGTGTGCTTGGTACTG+TGG | + | chr1_3:68209996-68210015 | Msa0136380:CDS | 45.0% | |
| GAAACGAGTGATGCAGTTAC+CGG | + | chr1_3:68210243-68210262 | Msa0136380:CDS | 45.0% | |
| ! | TGTTTGGTCTTCAACAAGGC+CGG | - | chr1_3:68210265-68210284 | None:intergenic | 45.0% |
| GAGCAGGAACAGATTGTGTT+TGG | - | chr1_3:68210281-68210300 | None:intergenic | 45.0% | |
| GGTCAAATGCGAGTGAAACA+CGG | + | chr1_3:68210378-68210397 | Msa0136380:CDS | 45.0% | |
| GTCAAATGCGAGTGAAACAC+GGG | + | chr1_3:68210379-68210398 | Msa0136380:CDS | 45.0% | |
| TCAAATGCGAGTGAAACACG+GGG | + | chr1_3:68210380-68210399 | Msa0136380:CDS | 45.0% | |
| ATCTCCACTGGTGTGTCAAA+CGG | + | chr1_3:68211306-68211325 | Msa0136380:intron | 45.0% | |
| AGACAGGTACACGGAAAGTA+AGG | - | chr1_3:68211601-68211620 | None:intergenic | 45.0% | |
| CGATACTGAAGACAGGTACA+CGG | - | chr1_3:68211610-68211629 | None:intergenic | 45.0% | |
| TTCAGCTCGATACTGAAGAC+AGG | - | chr1_3:68211617-68211636 | None:intergenic | 45.0% | |
| GGCAAAAGGCAAGACAACAA+GGG | - | chr1_3:68211800-68211819 | None:intergenic | 45.0% | |
| TGGCAAAAGGCAAGACAACA+AGG | - | chr1_3:68211801-68211820 | None:intergenic | 45.0% | |
| CCAATTTGGTAAAACGGGTC+TGG | - | chr1_3:68211835-68211854 | None:intergenic | 45.0% | |
| ! | CCAGACCCGTTTTACCAAAT+TGG | + | chr1_3:68211832-68211851 | Msa0136380:intron | 45.0% |
| AGCACCCCAAATCTTACTAC+AGG | + | chr1_3:68211877-68211896 | Msa0136380:CDS | 45.0% | |
| TGTGGCACAAACACTGTGAA+TGG | - | chr1_3:68212031-68212050 | None:intergenic | 45.0% | |
| AGCCAGAGAAGGAGATTCAA+CGG | + | chr1_3:68212443-68212462 | Msa0136380:CDS | 45.0% | |
| !! | GAGATTGATAGCGAGGATGT+AGG | + | chr1_3:68212577-68212596 | Msa0136380:intron | 45.0% |
| TAGTAGCCAACACTTTGGTC+TGG | - | chr1_3:68212705-68212724 | None:intergenic | 45.0% | |
| !! | GTCTCTCTCTTACTGATTCC+TGG | + | chr1_3:68212980-68212999 | Msa0136380:intron | 45.0% |
| ! | AGTTTTCCAACTAACCTCCC+AGG | - | chr1_3:68213001-68213020 | None:intergenic | 45.0% |
| !! | TACAGCTGCTGGAAGTATCT+TGG | + | chr1_3:68213324-68213343 | Msa0136380:CDS | 45.0% |
| AATCATCTGAAGGAAGTCCC+AGG | - | chr1_3:68213357-68213376 | None:intergenic | 45.0% | |
| ! | ATGTATTGATCCTCATGGCC+TGG | - | chr1_3:68213490-68213509 | None:intergenic | 45.0% |
| AGGCCATGAGGATCAATACA+TGG | + | chr1_3:68213489-68213508 | Msa0136380:CDS | 45.0% | |
| GGCCATGAGGATCAATACAT+GGG | + | chr1_3:68213490-68213509 | Msa0136380:CDS | 45.0% | |
| ! | GACCCATGTATTGATCCTCA+TGG | - | chr1_3:68213495-68213514 | None:intergenic | 45.0% |
| TCTTCCTTCGGAAGATTCAG+AGG | + | chr1_3:68213513-68213532 | Msa0136380:CDS | 45.0% | |
| TCATCCTCTGAATCTTCCGA+AGG | - | chr1_3:68213520-68213539 | None:intergenic | 45.0% | |
| CGATTTCACATCTGACTCTG+AGG | + | chr1_3:68213600-68213619 | Msa0136380:CDS | 45.0% | |
| TCTTTAGCAGAGCCAGATCT+TGG | + | chr1_3:68213760-68213779 | Msa0136380:CDS | 45.0% | |
| TGGTGAAGAGGATTTGACTC+CGG | + | chr1_3:68213780-68213799 | Msa0136380:CDS | 45.0% | |
| AGGATTTGACTCCGGTTTCT+GGG | + | chr1_3:68213788-68213807 | Msa0136380:CDS | 45.0% | |
| TCTACTTGGAGTAGCAGTGT+CGG | - | chr1_3:68214315-68214334 | None:intergenic | 45.0% | |
| TGACCGCCAAAATAACTCCA+GGG | + | chr1_3:68214345-68214364 | Msa0136380:CDS | 45.0% | |
| !!! | TGACCCTGGAGTTATTTTGG+CGG | - | chr1_3:68214351-68214370 | None:intergenic | 45.0% |
| ! | TGGTGACCCTGGAGTTATTT+TGG | - | chr1_3:68214354-68214373 | None:intergenic | 45.0% |
| ATAACTCCAGGGTCACCAAA+TGG | + | chr1_3:68214356-68214375 | Msa0136380:CDS | 45.0% | |
| AGTACGGCGGGAATTATTTG+AGG | - | chr1_3:68214387-68214406 | None:intergenic | 45.0% | |
| TCACCCACCAAAACACTTGA+AGG | + | chr1_3:68214452-68214471 | Msa0136380:CDS | 45.0% | |
| !! | GCATCCTTCAAGTGTTTTGG+TGG | - | chr1_3:68214459-68214478 | None:intergenic | 45.0% |
| ! | CGTGCATCCTTCAAGTGTTT+TGG | - | chr1_3:68214462-68214481 | None:intergenic | 45.0% |
| ACTTGGAGAAGCTGTTGTTC+AGG | + | chr1_3:68214517-68214536 | Msa0136380:CDS | 45.0% | |
| !!! | AAGTGATTTTTTGGGGGGAG+AGG | + | chr1_3:68214671-68214690 | Msa0136380:intron | 45.0% |
| !!! | AGTGATTTTTTGGGGGGAGA+GGG | + | chr1_3:68214672-68214691 | Msa0136380:intron | 45.0% |
| CCTCAACATGCATGCAAGTA+TGG | - | chr1_3:68214935-68214954 | None:intergenic | 45.0% | |
| CCATACTTGCATGCATGTTG+AGG | + | chr1_3:68214932-68214951 | Msa0136380:intron | 45.0% | |
| ! | TTGCGCCAAGCTTTCTTTTG+CGG | - | chr1_3:68215045-68215064 | None:intergenic | 45.0% |
| !! | ACTGGGACTCACTTTTCAAC+AGG | + | chr1_3:68215067-68215086 | Msa0136380:CDS | 45.0% |
| !! | GGACTCACTTTTCAACAGGT+AGG | + | chr1_3:68215071-68215090 | Msa0136380:intron | 45.0% |
| GTTAACTCAGAGTCATGGGA+GGG | - | chr1_3:68215141-68215160 | None:intergenic | 45.0% | |
| CCGACATTCATCATGTAAGG+AGG | + | chr1_3:68215216-68215235 | Msa0136380:CDS | 45.0% | |
| ! | TGAAGCATTACTACCTGGAC+TGG | - | chr1_3:68215242-68215261 | None:intergenic | 45.0% |
| ! | TGCTGTGAAGCATTACTACC+TGG | - | chr1_3:68215247-68215266 | None:intergenic | 45.0% |
| AGGTAGTAATGCTTCACAGC+AGG | + | chr1_3:68215246-68215265 | Msa0136380:CDS | 45.0% | |
| ! | ATTTTCAGCTCCGCTTTCAC+TGG | - | chr1_3:68215320-68215339 | None:intergenic | 45.0% |
| AAACCCCAAGCTCGAAGAAA+AGG | + | chr1_3:68215449-68215468 | Msa0136380:CDS | 45.0% | |
| ! | CTTCCTTTTCTTCGAGCTTG+GGG | - | chr1_3:68215455-68215474 | None:intergenic | 45.0% |
| ! | GCTTCCTTTTCTTCGAGCTT+GGG | - | chr1_3:68215456-68215475 | None:intergenic | 45.0% |
| TTTGATTGCTTACCGGTAGC+TGG | + | chr1_3:68215529-68215548 | Msa0136380:CDS | 45.0% | |
| TTATTGCTTGTGCCAGCTAC+CGG | - | chr1_3:68215544-68215563 | None:intergenic | 45.0% | |
| GGATCTCAATCTCACACGAT+AGG | - | chr1_3:68215629-68215648 | None:intergenic | 45.0% | |
| TCGTGTGAGATTGAGATCCT+CGG | + | chr1_3:68215630-68215649 | Msa0136380:three_prime_UTR | 45.0% | |
| TCCTCGGATGATCATCATCT+TGG | + | chr1_3:68215646-68215665 | Msa0136380:three_prime_UTR | 45.0% | |
| TCCAAGATGATGATCATCCG+AGG | - | chr1_3:68215650-68215669 | None:intergenic | 45.0% | |
| !!! | TTCTTTTAATTATTATTTTT+TGG | + | chr1_3:68213242-68213261 | Msa0136380:intron | 5.0% |
| !! | AATACTATAAATAAATATAT+TGG | + | chr1_3:68214749-68214768 | Msa0136380:intron | 5.0% |
| CGCAAGCCCTAACATGAAGA+AGG | + | chr1_3:68208928-68208947 | Msa0136380:five_prime_UTR | 50.0% | |
| GAAGAACGGTAGCCCAGATT+TGG | + | chr1_3:68208952-68208971 | Msa0136380:five_prime_UTR | 50.0% | |
| GAGAGAAAGAGAGGGATGAG+TGG | - | chr1_3:68209049-68209068 | None:intergenic | 50.0% | |
| TCTTCATATTCCTCGCCGGA+CGG | + | chr1_3:68209102-68209121 | Msa0136380:five_prime_UTR | 50.0% | |
| CCAAGCAAGCAAGCAAGCTT+TGG | - | chr1_3:68209565-68209584 | None:intergenic | 50.0% | |
| ! | CCAAAGCTTGCTTGCTTGCT+TGG | + | chr1_3:68209562-68209581 | Msa0136380:five_prime_UTR | 50.0% |
| ! | ACGAAAGGCTTTGGTTGTGG+TGG | + | chr1_3:68209832-68209851 | Msa0136380:five_prime_UTR | 50.0% |
| ACTGCATCTCTCATTTCGCC+AGG | - | chr1_3:68210096-68210115 | None:intergenic | 50.0% | |
| !! | ACTTGAACAGGAACGGGTTG+TGG | - | chr1_3:68210141-68210160 | None:intergenic | 50.0% |
| TTCGCAACATCTCCAGAAGG+TGG | - | chr1_3:68210195-68210214 | None:intergenic | 50.0% | |
| ACTGCATCACTCGTTTCACC+AGG | - | chr1_3:68210240-68210259 | None:intergenic | 50.0% | |
| ATGCTTATTCTGGTGAGGGC+TGG | + | chr1_3:68210679-68210698 | Msa0136380:CDS | 50.0% | |
| TATTCTGGTGAGGGCTGGAA+AGG | + | chr1_3:68210684-68210703 | Msa0136380:CDS | 50.0% | |
| ! | CGGGTCTGGCTCAGATTAAA+TGG | - | chr1_3:68211821-68211840 | None:intergenic | 50.0% |
| GAACAACTGATGCGCTAGCT+CGG | - | chr1_3:68211913-68211932 | None:intergenic | 50.0% | |
| TGGCATACACGGGATAAGCT+TGG | - | chr1_3:68211935-68211954 | None:intergenic | 50.0% | |
| GCCAGAGAAGGAGATTCAAC+GGG | + | chr1_3:68212444-68212463 | Msa0136380:CDS | 50.0% | |
| !! | TGAGGGAGAGATTGATAGCG+AGG | + | chr1_3:68212570-68212589 | Msa0136380:CDS | 50.0% |
| ATGGAGGATCCAAACAGAGC+TGG | - | chr1_3:68212774-68212793 | None:intergenic | 50.0% | |
| !! | CTCTCTTACTGATTCCTGGG+AGG | + | chr1_3:68212984-68213003 | Msa0136380:intron | 50.0% |
| CTGATTCCTGGGAGGTTAGT+TGG | + | chr1_3:68212992-68213011 | Msa0136380:intron | 50.0% | |
| CGGGAAAAACCCTCTGAACA+AGG | - | chr1_3:68213297-68213316 | None:intergenic | 50.0% | |
| ATTTGAGGATCCAGGCCATG+AGG | + | chr1_3:68213477-68213496 | Msa0136380:CDS | 50.0% | |
| TGTGACATCATCTTGTCCGG+TGG | - | chr1_3:68213656-68213675 | None:intergenic | 50.0% | |
| TGATGTCACATCTGCACCGT+TGG | + | chr1_3:68213666-68213685 | Msa0136380:CDS | 50.0% | |
| AGAGCCAGATCTTGGTGAAG+AGG | + | chr1_3:68213768-68213787 | Msa0136380:CDS | 50.0% | |
| GAGGATTTGACTCCGGTTTC+TGG | + | chr1_3:68213787-68213806 | Msa0136380:CDS | 50.0% | |
| GACAGCTGTGTTCCTATTGC+AGG | + | chr1_3:68214250-68214269 | Msa0136380:intron | 50.0% | |
| CTGACCGCCAAAATAACTCC+AGG | + | chr1_3:68214344-68214363 | Msa0136380:CDS | 50.0% | |
| ! | ATGCTGATGGGTGTTCCTCT+TGG | - | chr1_3:68214411-68214430 | None:intergenic | 50.0% |
| CTTGAAGGATGCACGGAATC+TGG | + | chr1_3:68214467-68214486 | Msa0136380:CDS | 50.0% | |
| ! | CTTTCTTTTGCGGTCCGTTC+TGG | - | chr1_3:68215035-68215054 | None:intergenic | 50.0% |
| ACGGACCGCAAAAGAAAGCT+TGG | + | chr1_3:68215037-68215056 | Msa0136380:CDS | 50.0% | |
| AGAAAGCTTGGCGCAAGAAC+TGG | + | chr1_3:68215049-68215068 | Msa0136380:CDS | 50.0% | |
| GAAAGCTTGGCGCAAGAACT+GGG | + | chr1_3:68215050-68215069 | Msa0136380:CDS | 50.0% | |
| GGTTAACTCAGAGTCATGGG+AGG | - | chr1_3:68215142-68215161 | None:intergenic | 50.0% | |
| GGTTTGGCAATTCTCGTTGG+AGG | + | chr1_3:68215191-68215210 | Msa0136380:CDS | 50.0% | |
| AGGAGATAATGCTTCGCAGC+AGG | + | chr1_3:68215294-68215313 | Msa0136380:CDS | 50.0% | |
| GACAGCGGAGGTGAAAACAA+AGG | + | chr1_3:68215376-68215395 | Msa0136380:CDS | 50.0% | |
| ! | GGAGCATCAACTAGTTTCCC+AGG | + | chr1_3:68215405-68215424 | Msa0136380:CDS | 50.0% |
| CTAGTTTCCCAGGAGACAAG+TGG | + | chr1_3:68215415-68215434 | Msa0136380:CDS | 50.0% | |
| ! | CGCTTCCTTTTCTTCGAGCT+TGG | - | chr1_3:68215457-68215476 | None:intergenic | 50.0% |
| GAACGGTAGCCCAGATTTGG+AGG | + | chr1_3:68208955-68208974 | Msa0136380:five_prime_UTR | 55.0% | |
| ATAGTAATCTCCGTCCGGCG+AGG | - | chr1_3:68209115-68209134 | None:intergenic | 55.0% | |
| GAGCTACTGGATCCACCTTC+TGG | + | chr1_3:68210180-68210199 | Msa0136380:CDS | 55.0% | |
| GTGAGGGCTGGAAAGGATAC+AGG | + | chr1_3:68210691-68210710 | Msa0136380:CDS | 55.0% | |
| CTTGCATGGTGCATCTCCAC+TGG | + | chr1_3:68211294-68211313 | Msa0136380:intron | 55.0% | |
| CTCACCGTTTGACACACCAG+TGG | - | chr1_3:68211313-68211332 | None:intergenic | 55.0% | |
| GCCCGTTGAATCTCCTTCTC+TGG | - | chr1_3:68212448-68212467 | None:intergenic | 55.0% | |
| GCGTCGCAGAATTTCGGACT+TGG | - | chr1_3:68212470-68212489 | None:intergenic | 55.0% | |
| ! | TGTGATGGTGCTTGTGACCG+CGG | + | chr1_3:68212742-68212761 | Msa0136380:CDS | 55.0% |
| AACAGAGCTGGTGATACCCG+CGG | - | chr1_3:68212762-68212781 | None:intergenic | 55.0% | |
| CGGGTATCACCAGCTCTGTT+TGG | + | chr1_3:68212762-68212781 | Msa0136380:CDS | 55.0% | |
| CATAACCAACCCTCATCGCC+AGG | - | chr1_3:68212901-68212920 | None:intergenic | 55.0% | |
| !! | GATGAGGGTTGGTTATGCCC+AGG | + | chr1_3:68212904-68212923 | Msa0136380:CDS | 55.0% |
| TCCAGCAGCTGTAGCTGCTT+CGG | - | chr1_3:68213317-68213336 | None:intergenic | 55.0% | |
| !! | TTCGCATCCTCTGGAGCATC+AGG | - | chr1_3:68213400-68213419 | None:intergenic | 55.0% |
| TGATGCTCCAGAGGATGCGA+AGG | + | chr1_3:68213399-68213418 | Msa0136380:CDS | 55.0% | |
| CCTTCAACCTTCGCATCCTC+TGG | - | chr1_3:68213409-68213428 | None:intergenic | 55.0% | |
| CCAGAGGATGCGAAGGTTGA+AGG | + | chr1_3:68213406-68213425 | Msa0136380:CDS | 55.0% | |
| GAGGATGCGAAGGTTGAAGG+AGG | + | chr1_3:68213409-68213428 | Msa0136380:CDS | 55.0% | |
| ! | AGCACCAGGATTGGGAGCAT+CGG | - | chr1_3:68213554-68213573 | None:intergenic | 55.0% |
| ! | GCGTTTCCATTTGGTGACCC+TGG | - | chr1_3:68214365-68214384 | None:intergenic | 55.0% |
| TGTTCCTCTTGGCAGTACGG+CGG | - | chr1_3:68214400-68214419 | None:intergenic | 55.0% | |
| GGGTGTTCCTCTTGGCAGTA+CGG | - | chr1_3:68214403-68214422 | None:intergenic | 55.0% | |
| TCATGTAAGGAGGCCAGTCC+AGG | + | chr1_3:68215226-68215245 | Msa0136380:CDS | 55.0% | |
| TCACAGCAGGCCAATGACAG+TGG | + | chr1_3:68215259-68215278 | Msa0136380:CDS | 55.0% | |
| ! | GTTTTCACCTCCGCTGTCAG+TGG | - | chr1_3:68215374-68215393 | None:intergenic | 55.0% |
| ! | AGCCGCAGACATCTGAAGCA+GGG | + | chr1_3:68215485-68215504 | Msa0136380:CDS | 55.0% |
| AGCCCTGCTTCAGATGTCTG+CGG | - | chr1_3:68215490-68215509 | None:intergenic | 55.0% | |
| !! | GAAGCAGGGCTGGTCCATAA+CGG | + | chr1_3:68215499-68215518 | Msa0136380:CDS | 55.0% |
| GAAGCAGCGACAGAGCTCTG+CGG | + | chr1_3:68210451-68210470 | Msa0136380:CDS | 60.0% | |
| ! | GTGATGGTGCTTGTGACCGC+GGG | + | chr1_3:68212743-68212762 | Msa0136380:CDS | 60.0% |
| AACCAACCCTCATCGCCAGG+TGG | - | chr1_3:68212898-68212917 | None:intergenic | 60.0% | |
| CCAGCAGCTGTAGCTGCTTC+GGG | - | chr1_3:68213316-68213335 | None:intergenic | 60.0% | |
| GATCCCGATGCTCCCAATCC+TGG | + | chr1_3:68213547-68213566 | Msa0136380:CDS | 60.0% | |
| !! | GCACCAGGATTGGGAGCATC+GGG | - | chr1_3:68213553-68213572 | None:intergenic | 60.0% |
| ATTCCCGCCGTACTGCCAAG+AGG | + | chr1_3:68214393-68214412 | Msa0136380:CDS | 60.0% | |
| GTTCCTCTTGGCAGTACGGC+GGG | - | chr1_3:68214399-68214418 | None:intergenic | 60.0% | |
| TCGCAGCAGGCCAGTGAAAG+CGG | + | chr1_3:68215307-68215326 | Msa0136380:CDS | 60.0% | |
| TCGCAGCAAGCCACTGACAG+CGG | + | chr1_3:68215361-68215380 | Msa0136380:CDS | 60.0% | |
| ! | GAGCCGCAGACATCTGAAGC+AGG | + | chr1_3:68215484-68215503 | Msa0136380:CDS | 60.0% |
| ! | GCAGACATCTGAAGCAGGGC+TGG | + | chr1_3:68215489-68215508 | Msa0136380:CDS | 60.0% |
| CCCGAAGCAGCTACAGCTGC+TGG | + | chr1_3:68213313-68213332 | Msa0136380:CDS | 65.0% | |
| CAGCAAGCCACTGACAGCGG+AGG | + | chr1_3:68215364-68215383 | Msa0136380:CDS | 65.0% | |
| GCGACAGAGCTCTGCGGTCG+AGG | + | chr1_3:68210457-68210476 | Msa0136380:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 68208894 | 68216004 | 68208894 | ID=Msa0136380;Name=Msa0136380 |
| chr1_3 | mRNA | 68208894 | 68216004 | 68208894 | ID=Msa0136380-mRNA-1;Parent=Msa0136380;Name=Msa0136380-mRNA-1;_AED=0.05;_eAED=0.05;_QI=460|0.7|0.81|0.90|0.8|0.72|11|416|847 |
| chr1_3 | exon | 68208894 | 68209152 | 68208894 | ID=Msa0136380-mRNA-1:exon:23550;Parent=Msa0136380-mRNA-1 |
| chr1_3 | exon | 68209551 | 68209623 | 68209551 | ID=Msa0136380-mRNA-1:exon:23551;Parent=Msa0136380-mRNA-1 |
| chr1_3 | exon | 68209821 | 68210712 | 68209821 | ID=Msa0136380-mRNA-1:exon:23552;Parent=Msa0136380-mRNA-1 |
| chr1_3 | exon | 68211836 | 68211946 | 68211836 | ID=Msa0136380-mRNA-1:exon:23553;Parent=Msa0136380-mRNA-1 |
| chr1_3 | exon | 68212429 | 68212594 | 68212429 | ID=Msa0136380-mRNA-1:exon:23554;Parent=Msa0136380-mRNA-1 |
| chr1_3 | exon | 68212685 | 68212808 | 68212685 | ID=Msa0136380-mRNA-1:exon:23555;Parent=Msa0136380-mRNA-1 |
| chr1_3 | exon | 68212893 | 68212957 | 68212893 | ID=Msa0136380-mRNA-1:exon:23556;Parent=Msa0136380-mRNA-1 |
| chr1_3 | exon | 68213304 | 68213852 | 68213304 | ID=Msa0136380-mRNA-1:exon:23557;Parent=Msa0136380-mRNA-1 |
| chr1_3 | exon | 68214272 | 68214538 | 68214272 | ID=Msa0136380-mRNA-1:exon:23558;Parent=Msa0136380-mRNA-1 |
| chr1_3 | exon | 68214999 | 68215088 | 68214999 | ID=Msa0136380-mRNA-1:exon:23559;Parent=Msa0136380-mRNA-1 |
| chr1_3 | exon | 68215181 | 68216004 | 68215181 | ID=Msa0136380-mRNA-1:exon:23560;Parent=Msa0136380-mRNA-1 |
| chr1_3 | five_prime_UTR | 68208894 | 68209152 | 68208894 | ID=Msa0136380-mRNA-1:five_prime_utr;Parent=Msa0136380-mRNA-1 |
| chr1_3 | five_prime_UTR | 68209551 | 68209623 | 68209551 | ID=Msa0136380-mRNA-1:five_prime_utr;Parent=Msa0136380-mRNA-1 |
| chr1_3 | five_prime_UTR | 68209821 | 68209948 | 68209821 | ID=Msa0136380-mRNA-1:five_prime_utr;Parent=Msa0136380-mRNA-1 |
| chr1_3 | CDS | 68209949 | 68210712 | 68209949 | ID=Msa0136380-mRNA-1:cds;Parent=Msa0136380-mRNA-1 |
| chr1_3 | CDS | 68211836 | 68211946 | 68211836 | ID=Msa0136380-mRNA-1:cds;Parent=Msa0136380-mRNA-1 |
| chr1_3 | CDS | 68212429 | 68212594 | 68212429 | ID=Msa0136380-mRNA-1:cds;Parent=Msa0136380-mRNA-1 |
| chr1_3 | CDS | 68212685 | 68212808 | 68212685 | ID=Msa0136380-mRNA-1:cds;Parent=Msa0136380-mRNA-1 |
| chr1_3 | CDS | 68212893 | 68212957 | 68212893 | ID=Msa0136380-mRNA-1:cds;Parent=Msa0136380-mRNA-1 |
| chr1_3 | CDS | 68213304 | 68213852 | 68213304 | ID=Msa0136380-mRNA-1:cds;Parent=Msa0136380-mRNA-1 |
| chr1_3 | CDS | 68214272 | 68214538 | 68214272 | ID=Msa0136380-mRNA-1:cds;Parent=Msa0136380-mRNA-1 |
| chr1_3 | CDS | 68214999 | 68215088 | 68214999 | ID=Msa0136380-mRNA-1:cds;Parent=Msa0136380-mRNA-1 |
| chr1_3 | CDS | 68215181 | 68215588 | 68215181 | ID=Msa0136380-mRNA-1:cds;Parent=Msa0136380-mRNA-1 |
| chr1_3 | three_prime_UTR | 68215589 | 68216004 | 68215589 | ID=Msa0136380-mRNA-1:three_prime_utr;Parent=Msa0136380-mRNA-1 |
| Gene Sequence |
| Protein sequence |