AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1433670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1433670 MtrunA17_Chr7g0260571 99.287 421 3 0 5 425 178 598 0.0 870
Msa1433670 MtrunA17_Chr1g0184861 74.408 422 104 2 7 425 4 424 0.0 672
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1433670 AT2G38840.2 75.000 416 104 0 5 420 21 436 0.0 683
Msa1433670 AT2G38840.1 75.000 416 104 0 5 420 179 594 0.0 682

Find 162 sgRNAs with CRISPR-Local

Find 459 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGGGATTCATTGGCTATTA+TGG 0.087308 tig0027402:+19823 Msa1433670:CDS
TGATACTGACTATCTTTATT+AGG 0.166330 tig0027402:-19601 None:intergenic
GTACAAGGAAAATCTCTAAA+TGG 0.236462 tig0027402:+20135 Msa1433670:CDS
GCATTCGATCAGCAACATTT+TGG 0.262273 tig0027402:+20967 Msa1433670:CDS
AATCATGTCATACAGGAATA+TGG 0.275361 tig0027402:+18633 Msa1433670:intron
GTCATACAGGAATATGGATT+TGG 0.280139 tig0027402:+18639 Msa1433670:intron
ATTCTATATTGGCGGTGTTA+TGG 0.294127 tig0027402:+22873 Msa1433670:CDS
CTCTCTCTTTCTTGTTATGA+AGG 0.295186 tig0027402:+18366 Msa1433670:five_prime_UTR
GATACTGACTATCTTTATTA+GGG 0.305401 tig0027402:-19600 None:intergenic
TTGGGGAACACCTATAGATT+TGG 0.306157 tig0027402:+18658 Msa1433670:five_prime_UTR
TTCTATATTGGCGGTGTTAT+GGG 0.307055 tig0027402:+22874 Msa1433670:CDS
CGGGATTCATTGGCTATTAT+GGG 0.323182 tig0027402:+19824 Msa1433670:CDS
GCAACTATAAAATGCCAAAC+TGG 0.328053 tig0027402:-22114 None:intergenic
TCATACAGGAATATGGATTT+GGG 0.336399 tig0027402:+18640 Msa1433670:intron
TCATCACTCCGATATTCCTT+TGG 0.339042 tig0027402:+23001 Msa1433670:three_prime_UTR
CGGTTGATGAAAATTGATAA+TGG 0.341994 tig0027402:-16432 None:intergenic
AGACCTACACAAGGTTGTTT+TGG 0.349932 tig0027402:+22067 Msa1433670:CDS
CACTTTATTACAACCCAGTT+TGG 0.355016 tig0027402:+22100 Msa1433670:CDS
GTCTAAGTCTCTATTTATAA+AGG 0.366560 tig0027402:+21921 Msa1433670:CDS
CATCACTCCGATATTCCTTT+GGG 0.374851 tig0027402:+23002 Msa1433670:three_prime_UTR
ATCCATCATATGTGAAGAAA+AGG 0.375973 tig0027402:+20067 Msa1433670:CDS
TGGAATCTCTCCCTTGTTCA+AGG 0.380178 tig0027402:-20794 None:intergenic
AGTTCTCAAGCTTCCTTCAA+TGG 0.384884 tig0027402:+21658 Msa1433670:CDS
GTAATTGGACCGTACCGTTC+CGG 0.394679 tig0027402:+18318 Msa1433670:five_prime_UTR
GAAGCTTGAAGATATCCTTC+TGG 0.396937 tig0027402:-20913 None:intergenic
CCGTCAATTTCCAAATCTAT+AGG 0.403247 tig0027402:-18668 None:intergenic
CAATCAAATCCGGGATTCAT+TGG 0.404107 tig0027402:+19814 Msa1433670:CDS
ATCATCAGATCAATCAAATC+CGG 0.411365 tig0027402:+19804 Msa1433670:intron
ACTGTAAAGTAATAATTCAT+TGG 0.414181 tig0027402:-23181 None:intergenic
GGAACGGAGGTTGTTGTTGT+TGG 0.414821 tig0027402:-16300 None:intergenic
CAGAAGGATTTGAAAGCATT+GGG 0.417042 tig0027402:+18720 Msa1433670:five_prime_UTR
TTTGCCACTTATAGTTATGA+TGG 0.420136 tig0027402:+16349 Msa1433670:five_prime_UTR
GTGCGAAGGTAAACCTTGTT+TGG 0.421349 tig0027402:-16147 None:intergenic
TCCACAAGAGAACCTGTTGA+TGG 0.427990 tig0027402:-20814 None:intergenic
TTTCTCCCTCGTCACGGTTG+TGG 0.429616 tig0027402:+21978 Msa1433670:CDS
TACAAGGAAAATCTCTAAAT+GGG 0.432658 tig0027402:+20136 Msa1433670:CDS
AAATGAACTTTATAATAAAC+CGG 0.436465 tig0027402:-22005 None:intergenic
ACAGAAGGATTTGAAAGCAT+TGG 0.437082 tig0027402:+18719 Msa1433670:five_prime_UTR
TATCGGAGTGATGAACAAAA+TGG 0.438346 tig0027402:-22992 None:intergenic
TTGAACCTGCCAAGCTCTTG+TGG 0.441248 tig0027402:+19361 Msa1433670:CDS
GACAAAGCTTTGTGACTTGA+AGG 0.448277 tig0027402:+20032 Msa1433670:CDS
AGGAGACAGAAATATTGATA+TGG 0.448597 tig0027402:+19698 Msa1433670:intron
CCCATTGTCGAACCTGATCC+TGG 0.459576 tig0027402:+17564 Msa1433670:five_prime_UTR
TCGTCACGGTTGTGGTTGGC+CGG 0.460211 tig0027402:+21986 Msa1433670:CDS
TGTGTGCTTGCAACAGAACT+AGG 0.461742 tig0027402:-23070 None:intergenic
AAGCTCGCCCAAAGGAATAT+CGG 0.466643 tig0027402:-23009 None:intergenic
GTTTGTTTCCTTCCTGAAGC+AGG 0.468484 tig0027402:+20164 Msa1433670:CDS
ATAAGCCACAAGAGCTTGGC+AGG 0.474426 tig0027402:-19366 None:intergenic
CTTACTGCCACAGATGCAAT+GGG 0.475076 tig0027402:-17645 None:intergenic
TTATGATGACTAACCGTCTC+AGG 0.475662 tig0027402:-18905 None:intergenic
GTCCATCATGTCCTCGCAAT+CGG 0.478174 tig0027402:-21627 None:intergenic
AGTCACAAAGCTTTGTCCGC+TGG 0.480181 tig0027402:-20026 None:intergenic
CCAGGATCAGGTTCGACAAT+GGG 0.480240 tig0027402:-17564 None:intergenic
AAGGGAGAGATTCCATCAAC+AGG 0.484642 tig0027402:+20802 Msa1433670:CDS
CCTATAGATTTGGAAATTGA+CGG 0.485037 tig0027402:+18668 Msa1433670:five_prime_UTR
AGGTTGTTGTTGTTGGTTGA+AGG 0.492203 tig0027402:-16293 None:intergenic
TTACTTACCTGTCAAGATCA+AGG 0.494526 tig0027402:-22167 None:intergenic
AAAACTTATGATGATTCAGT+TGG 0.497813 tig0027402:+22967 Msa1433670:exon
TCGTCTATCACAGGAAGGCT+TGG 0.499537 tig0027402:+17599 Msa1433670:five_prime_UTR
TAAGAAGTCAGTCACGCAAC+TGG 0.499993 tig0027402:+21002 Msa1433670:CDS
TCCCTCGTCACGGTTGTGGT+TGG 0.503251 tig0027402:+21982 Msa1433670:CDS
TAAGTTATACAGTGAAAAGA+TGG 0.504761 tig0027402:+20870 Msa1433670:CDS
CATCTCCCACACAGCTTCTG+TGG 0.505192 tig0027402:+23122 Msa1433670:three_prime_UTR
GAGTCTTCATTTGTTCTAAG+AGG 0.506255 tig0027402:+23340 Msa1433670:three_prime_UTR
GCCCAGTCCTTGATCTTGAC+AGG 0.508041 tig0027402:+22160 Msa1433670:CDS
TTCGATCCTTGTCCGTGCGA+AGG 0.508281 tig0027402:-16161 None:intergenic
ATGCGTGACACGAAAACAAA+AGG 0.511208 tig0027402:+18525 Msa1433670:five_prime_UTR
ATACTTGAAGCCTTGAACAA+GGG 0.513345 tig0027402:+20784 Msa1433670:CDS
TGAAGATATCCTTCTGGAAG+AGG 0.514011 tig0027402:-20907 None:intergenic
AGCTTTGTGACTTGAAGGAT+GGG 0.521130 tig0027402:+20037 Msa1433670:CDS
AAGCTTTGTGACTTGAAGGA+TGG 0.521331 tig0027402:+20036 Msa1433670:CDS
CAAGCACACAAAGTGTCAAA+TGG 0.522477 tig0027402:+23083 Msa1433670:three_prime_UTR
TCTATCACAGGAAGGCTTGG+AGG 0.522783 tig0027402:+17602 Msa1433670:five_prime_UTR
TGCAGATGGGCTATCCCACT+TGG 0.526646 tig0027402:+22831 Msa1433670:intron
AGGGAAATCAGTGCAACAAA+TGG 0.528159 tig0027402:+19555 Msa1433670:CDS
CTTCATTTGTTCTAAGAGGA+GGG 0.529334 tig0027402:+23344 Msa1433670:three_prime_UTR
TCAATGGCAAAATTTAATGC+AGG 0.530565 tig0027402:+21674 Msa1433670:CDS
TGAATTGAATTTACTGAACA+AGG 0.530929 tig0027402:-16240 None:intergenic
GGTGGCTTTCTCCCTCGTCA+CGG 0.533465 tig0027402:+21972 Msa1433670:CDS
AGCAAACTACGAGGGACGTA+TGG 0.536139 tig0027402:+21748 Msa1433670:CDS
GTGTCCATCATAACTATAAG+TGG 0.536238 tig0027402:-16353 None:intergenic
ACTTACTGCCACAGATGCAA+TGG 0.537826 tig0027402:-17646 None:intergenic
CGTCACCTCTAGCCATGTCA+TGG 0.538792 tig0027402:-20936 None:intergenic
TCTTCATTTGTTCTAAGAGG+AGG 0.539985 tig0027402:+23343 Msa1433670:three_prime_UTR
CAGGTTCAAATGCAACATCC+TGG 0.541309 tig0027402:-19347 None:intergenic
ATGGTTTCAGAAGAAACAGT+TGG 0.542034 tig0027402:-16413 None:intergenic
GATACTTGAAGCCTTGAACA+AGG 0.544169 tig0027402:+20783 Msa1433670:intron
CCATAATAGCCAATGAATCC+CGG 0.544948 tig0027402:-19823 None:intergenic
AACAAACCCCATTGCATCTG+TGG 0.545406 tig0027402:+17638 Msa1433670:five_prime_UTR
TTGGATAAGCCACAAGAGCT+TGG 0.550397 tig0027402:-19370 None:intergenic
TTTCTAACATTGGCCAAACA+AGG 0.553880 tig0027402:+16134 Msa1433670:five_prime_UTR
AGCTTTGTCCGCTGGAGATG+TGG 0.557191 tig0027402:-20018 None:intergenic
ATCCGTCCAAAGATTGTACA+AGG 0.558214 tig0027402:+20120 Msa1433670:CDS
ACTGGATGAAGAAATAGATA+AGG 0.558410 tig0027402:+21020 Msa1433670:CDS
TCCATCATATGTGAAGAAAA+GGG 0.560512 tig0027402:+20068 Msa1433670:CDS
TCCATCAACAGGTTCTCTTG+TGG 0.561510 tig0027402:+20813 Msa1433670:CDS
GAAGCTTGAGAACTTGAAGC+TGG 0.561670 tig0027402:-21649 None:intergenic
TTCCTTGTACAATCTTTGGA+CGG 0.563359 tig0027402:-20122 None:intergenic
AGAACTAGGTAGGTGCATGC+AGG 0.569739 tig0027402:-23056 None:intergenic
TACCTGTCAAGATCAAGGAC+TGG 0.569959 tig0027402:-22162 None:intergenic
TACAAAACTTCGTCTATCAC+AGG 0.570289 tig0027402:+17590 Msa1433670:five_prime_UTR
CAACTATAAAATGCCAAACT+GGG 0.572320 tig0027402:-22113 None:intergenic
GAAATCAGTGCAACAAATGG+TGG 0.572848 tig0027402:+19558 Msa1433670:CDS
GTTGAAACAAGACAGCATCA+TGG 0.573699 tig0027402:-16207 None:intergenic
CACTTGCAATGTCCGTGTGT+TGG 0.574543 tig0027402:+19212 Msa1433670:exon
AAAGATATTATTACACCAAG+TGG 0.576063 tig0027402:-22846 None:intergenic
CAGTGAAAAGATGGCCACAT+TGG 0.576184 tig0027402:+20879 Msa1433670:CDS
TCAAGCCACAGAAGCTGTGT+GGG 0.579053 tig0027402:-23127 None:intergenic
GGTTTACCTTCGCACGGACA+AGG 0.580176 tig0027402:+16155 Msa1433670:five_prime_UTR
AAAGACTTTCCGGAACGGTA+CGG 0.581971 tig0027402:-18327 None:intergenic
ACATACTTGTGGTAAGCTAA+AGG 0.582503 tig0027402:-19861 None:intergenic
TCATCAGATCAATCAAATCC+GGG 0.584889 tig0027402:+19805 Msa1433670:intron
TCATGTATTGACATGTAGAC+GGG 0.588424 tig0027402:+23264 Msa1433670:three_prime_UTR
CACCGATTGCGAGGACATGA+TGG 0.588869 tig0027402:+21625 Msa1433670:CDS
GTCATGTATTGACATGTAGA+CGG 0.589403 tig0027402:+23263 Msa1433670:three_prime_UTR
TATCTATAATCTGCCTGAGA+CGG 0.594970 tig0027402:+18892 Msa1433670:five_prime_UTR
AAGATATTATTACACCAAGT+GGG 0.595317 tig0027402:-22845 None:intergenic
GCCAACCACAACCGTGACGA+GGG 0.595392 tig0027402:-21983 None:intergenic
AGTCGAATGTATATGATGAT+CGG 0.595943 tig0027402:+18744 Msa1433670:five_prime_UTR
GGCCAACCACAACCGTGACG+AGG 0.597641 tig0027402:-21984 None:intergenic
TATTATGGGTGACAATAGTA+CGG 0.600421 tig0027402:+19838 Msa1433670:CDS
TTTGATATCTGAAAATCGAA+AGG 0.602266 tig0027402:-16321 None:intergenic
ACCAGGATCAGGTTCGACAA+TGG 0.602966 tig0027402:-17565 None:intergenic
ATCAAGCCACAGAAGCTGTG+TGG 0.603181 tig0027402:-23128 None:intergenic
TCTTCAAGCTTCCCATGACA+TGG 0.604681 tig0027402:+20924 Msa1433670:CDS
AAACAAGGTTTACCTTCGCA+CGG 0.606024 tig0027402:+16149 Msa1433670:five_prime_UTR
TAAATCTTCAAAGCTTTGTG+AGG 0.609297 tig0027402:+21595 Msa1433670:CDS
AGTGTCAAATGGTGATCAGA+GGG 0.609348 tig0027402:+23094 Msa1433670:three_prime_UTR
GTCACCTCTAGCCATGTCAT+GGG 0.611810 tig0027402:-20935 None:intergenic
ACCTGTCAAGATCAAGGACT+GGG 0.612834 tig0027402:-22161 None:intergenic
ACCAAGTACCTGCTTCAGGA+AGG 0.616523 tig0027402:-20172 None:intergenic
AAGTGTCAAATGGTGATCAG+AGG 0.619570 tig0027402:+23093 Msa1433670:three_prime_UTR
TTATAAAGGAGTACAACCAC+AGG 0.623382 tig0027402:+21935 Msa1433670:CDS
GCTTCCCATGACATGGCTAG+AGG 0.624847 tig0027402:+20931 Msa1433670:CDS
CTACGAGGGACGTATGGCAA+AGG 0.627470 tig0027402:+21754 Msa1433670:CDS
GGCACTGTACACCGATTGCG+AGG 0.628615 tig0027402:+21616 Msa1433670:CDS
TTGCTGATCGAATGCTTGCA+AGG 0.630574 tig0027402:-20959 None:intergenic
GCTTTGTGACTTGAAGGATG+GGG 0.644739 tig0027402:+20038 Msa1433670:CDS
CTGAAAATCGAAAGGAACGG+AGG 0.648245 tig0027402:-16313 None:intergenic
CTGACTTCTTAGCATGGTGA+CGG 0.653596 tig0027402:-20990 None:intergenic
TGGAAGAGGTAGAGCCAATG+TGG 0.653977 tig0027402:-20893 None:intergenic
AAACTTCGTCTATCACAGGA+AGG 0.654561 tig0027402:+17594 Msa1433670:five_prime_UTR
TGACCAAAACAACCTTGTGT+AGG 0.656892 tig0027402:-22070 None:intergenic
CTTCACTCTATTCCAACACA+CGG 0.659292 tig0027402:-19224 None:intergenic
GCGTGACTGACTTCTTAGCA+TGG 0.660593 tig0027402:-20996 None:intergenic
TTGGCTCTACCTCTTCCAGA+AGG 0.665756 tig0027402:+20898 Msa1433670:CDS
ATAACTATAAGTGGCAAATG+CGG 0.668267 tig0027402:-16344 None:intergenic
CATACAGGAATATGGATTTG+GGG 0.676634 tig0027402:+18641 Msa1433670:intron
ACCTTCAAAAGCAAACTACG+AGG 0.688387 tig0027402:+21739 Msa1433670:CDS
ACTTACGCAGAAAATCACGT+TGG 0.691453 tig0027402:-19389 None:intergenic
TCAAACAGCCACATCTCCAG+CGG 0.692057 tig0027402:+20010 Msa1433670:intron
AAGCACAGAACTTATAACAG+TGG 0.700561 tig0027402:-18870 None:intergenic
CCTTCAAAAGCAAACTACGA+GGG 0.700718 tig0027402:+21740 Msa1433670:CDS
GTAAAATCAACATGATACTG+TGG 0.700820 tig0027402:-23159 None:intergenic
CGTGTGTTGGAATAGAGTGA+AGG 0.701201 tig0027402:+19225 Msa1433670:CDS
TATCTGAAAATCGAAAGGAA+CGG 0.702519 tig0027402:-16316 None:intergenic
TATTTCTGGAGACCTACACA+AGG 0.706921 tig0027402:+22058 Msa1433670:CDS
CCAACCAATTGAAAAGCCTG+TGG 0.707705 tig0027402:-21951 None:intergenic
TACATGTCAATACATGACAG+TGG 0.724648 tig0027402:-23258 None:intergenic
TGCTTGCAACAGAACTAGGT+AGG 0.736436 tig0027402:-23066 None:intergenic
TTACTGCCACAGATGCAATG+GGG 0.746702 tig0027402:-17644 None:intergenic
AAAAGAAACATGGATCACGG+TGG 0.783518 tig0027402:+22898 Msa1433670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAAAATTCAATTTTTATG+AGG + tig0027402:16642-16661 Msa1433670:intron 10.0%
!!! TAGAAGTCAATTTTATTTTT+GGG + tig0027402:17014-17033 Msa1433670:intron 15.0%
!! TAAGAAACATAAAAAAAAGT+TGG - tig0027402:17428-17447 None:intergenic 15.0%
!!! TTAGCTAAAATTTTTATGAA+TGG + tig0027402:18137-18156 Msa1433670:intron 15.0%
!! GTAATATTATTACTGATAAT+TGG - tig0027402:19749-19768 None:intergenic 15.0%
!!! ATTATGCTACATTTTATATA+AGG - tig0027402:20437-20456 None:intergenic 15.0%
!!! AATGTAGCATAATTTTTTTA+AGG + tig0027402:20444-20463 Msa1433670:intron 15.0%
!! AATATTCGTTATAGTATAAT+GGG + tig0027402:21052-21071 Msa1433670:intron 15.0%
!!! TCAAATATGTTATATAGTTT+TGG + tig0027402:21158-21177 Msa1433670:intron 15.0%
!!! TTTAAAGCTTATATTTACTA+TGG + tig0027402:21506-21525 Msa1433670:intron 15.0%
!! TTAAAGCTTATATTTACTAT+GGG + tig0027402:21507-21526 Msa1433670:intron 15.0%
!! AAATGAACTTTATAATAAAC+CGG - tig0027402:22008-22027 None:intergenic 15.0%
!!! ATCAAACTAACAATATTTTA+TGG + tig0027402:22769-22788 Msa1433670:intron 15.0%
!!! TATCTTTTTTCATTCTATAT+TGG + tig0027402:22862-22881 Msa1433670:CDS 15.0%
!! GTAACAAAAAAAAAAAAAAG+AGG + tig0027402:23374-23393 Msa1433670:three_prime_UTR 15.0%
!! AAAGAGATAAAAGAAACTTA+CGG - tig0027402:16455-16474 None:intergenic 20.0%
!!! TTGTTAAAGTTAAAACCTTT+TGG + tig0027402:16545-16564 Msa1433670:intron 20.0%
!!! ATTCAATTTTTATGAGGTTA+AGG + tig0027402:16648-16667 Msa1433670:intron 20.0%
!!! TTCAATTTTTATGAGGTTAA+GGG + tig0027402:16649-16668 Msa1433670:intron 20.0%
!! ACTAAGTAATCTTCATTAAT+TGG - tig0027402:16835-16854 None:intergenic 20.0%
!!! GTAGAAGTCAATTTTATTTT+TGG + tig0027402:17013-17032 Msa1433670:intron 20.0%
!!! TTTTATTTTTGGGTCAATTA+TGG + tig0027402:17024-17043 Msa1433670:intron 20.0%
!!! CATTTTGTTTATATTATGGA+GGG - tig0027402:17190-17209 None:intergenic 20.0%
!! CTCCATAATATAAACAAAAT+GGG + tig0027402:17189-17208 Msa1433670:intron 20.0%
!!! TTCCCATTTTGTTTATATTA+TGG - tig0027402:17194-17213 None:intergenic 20.0%
!! TGGTGATAAATTGTTAATTT+AGG + tig0027402:17286-17305 Msa1433670:intron 20.0%
!! TGATAAATTGTTAATTTAGG+TGG + tig0027402:17289-17308 Msa1433670:intron 20.0%
!! GTTTGAATTTAGAAAACAAA+AGG - tig0027402:17691-17710 None:intergenic 20.0%
!! GAAATAATGACTTATCTAAA+TGG - tig0027402:17809-17828 None:intergenic 20.0%
!! AAGAAAATAAAAGTTTGCAT+TGG - tig0027402:18025-18044 None:intergenic 20.0%
!!! CATAAAAATTTTAGCTAATG+AGG - tig0027402:18135-18154 None:intergenic 20.0%
!!! TTTCTACTTTTATCACTTTA+TGG + tig0027402:18256-18275 Msa1433670:intron 20.0%
!!! TTGTTACTACTTTTTTTATC+AGG + tig0027402:18296-18315 Msa1433670:intron 20.0%
!!! TACTTTTTTTATCAGGTAAT+TGG + tig0027402:18303-18322 Msa1433670:intron 20.0%
!!! CTAACATATTTGTTTTCTTA+GGG + tig0027402:18487-18506 Msa1433670:intron 20.0%
!!! TTATCATTTTTCTCTTTGTT+AGG + tig0027402:18558-18577 Msa1433670:intron 20.0%
!! ACATCAAATTAACAACAAAA+AGG - tig0027402:19300-19319 None:intergenic 20.0%
!!! CAATGCTTATAAAGTTATTT+TGG + tig0027402:19437-19456 Msa1433670:intron 20.0%
!!! AAAAAATTGCTTTAGAAAAC+AGG - tig0027402:19652-19671 None:intergenic 20.0%
!! CAGTAATAATATTACTAGTT+TGG + tig0027402:19754-19773 Msa1433670:intron 20.0%
!!! TTTTATTAAAAACACTGCTT+TGG + tig0027402:19959-19978 Msa1433670:intron 20.0%
!!! AATATTTTGTTTGATTGAGA+GGG - tig0027402:20558-20577 None:intergenic 20.0%
!!! AAATATTTTGTTTGATTGAG+AGG - tig0027402:20559-20578 None:intergenic 20.0%
!! TCATCAGAAAACATTAAAAA+TGG - tig0027402:20664-20683 None:intergenic 20.0%
!!! TAAAAGATAAAGCTGTTTTA+TGG - tig0027402:20750-20769 None:intergenic 20.0%
!! GAATATTCGTTATAGTATAA+TGG + tig0027402:21051-21070 Msa1433670:intron 20.0%
!!! CATATTCATTTGTTACATTA+AGG - tig0027402:21887-21906 None:intergenic 20.0%
!!! AAGTTCATTTTGATTGAAAT+TGG + tig0027402:22018-22037 Msa1433670:CDS 20.0%
!!! ATGGTTACTTTTTATATTTC+TGG + tig0027402:22044-22063 Msa1433670:CDS 20.0%
!!! TTTAAGATCCATTATATTGT+AGG + tig0027402:22253-22272 Msa1433670:intron 20.0%
!! TGTTTGATTCATAAAAACTA+TGG + tig0027402:22622-22641 Msa1433670:intron 20.0%
!!! TTTTTATTGAAATTGCAGAT+GGG + tig0027402:22818-22837 Msa1433670:intron 20.0%
!!! TTTTTATTGCTGCTATATAA+TGG - tig0027402:22930-22949 None:intergenic 20.0%
!! ACTGTAAAGTAATAATTCAT+TGG - tig0027402:23184-23203 None:intergenic 20.0%
! TGAATTGAATTTACTGAACA+AGG - tig0027402:16243-16262 None:intergenic 25.0%
! TTTGATATCTGAAAATCGAA+AGG - tig0027402:16324-16343 None:intergenic 25.0%
! ATGTATGGATGGTAAATAAA+TGG + tig0027402:16744-16763 Msa1433670:intron 25.0%
! AAGATTACTTAGTGTATGTT+TGG + tig0027402:16842-16861 Msa1433670:intron 25.0%
!! ACTCTTGAGTTTTTCTTTTT+TGG + tig0027402:16983-17002 Msa1433670:intron 25.0%
! TAAGAATAGAAGATATTGTG+AGG + tig0027402:17070-17089 Msa1433670:intron 25.0%
!!! CCATTTTGTTTATATTATGG+AGG - tig0027402:17191-17210 None:intergenic 25.0%
! CCTCCATAATATAAACAAAA+TGG + tig0027402:17188-17207 Msa1433670:intron 25.0%
! ATGTTGCCAATTCAATAATT+TGG + tig0027402:17351-17370 Msa1433670:intron 25.0%
! TGTTGCCAATTCAATAATTT+GGG + tig0027402:17352-17371 Msa1433670:intron 25.0%
! GATATGACAAAACAATAACA+AGG - tig0027402:17460-17479 None:intergenic 25.0%
! CATAACTAACAAAAGAAGTT+TGG - tig0027402:17501-17520 None:intergenic 25.0%
!! ACTTGAAAGTTGATTTAACT+TGG + tig0027402:17898-17917 Msa1433670:intron 25.0%
! ACAGCAGATACTATATAAAT+AGG + tig0027402:17942-17961 Msa1433670:intron 25.0%
! ATTAAGCAAAAAAGACTTTC+CGG - tig0027402:18340-18359 None:intergenic 25.0%
!!! GCTAACATATTTGTTTTCTT+AGG + tig0027402:18486-18505 Msa1433670:intron 25.0%
!!! ATATTTGTTTTCTTAGGGTT+TGG + tig0027402:18492-18511 Msa1433670:intron 25.0%
!!! GAGCTCGTTTTAAATTTTTT+AGG + tig0027402:18940-18959 Msa1433670:intron 25.0%
!!! GAGAATAAAACATTTTAGCA+TGG - tig0027402:18966-18985 None:intergenic 25.0%
!!! TCTGCTTTGTAACATTTTTT+TGG + tig0027402:19139-19158 Msa1433670:five_prime_UTR 25.0%
!!! CTGCTTTGTAACATTTTTTT+GGG + tig0027402:19140-19159 Msa1433670:five_prime_UTR 25.0%
!!! TTGATGTATTTTTCAATTGC+TGG + tig0027402:19313-19332 Msa1433670:intron 25.0%
!! GATACTGACTATCTTTATTA+GGG - tig0027402:19603-19622 None:intergenic 25.0%
!! TGATACTGACTATCTTTATT+AGG - tig0027402:19604-19623 None:intergenic 25.0%
! TACAAGGAAAATCTCTAAAT+GGG + tig0027402:20136-20155 Msa1433670:CDS 25.0%
!! GTTTTTCATGTTCTCTTTAA+TGG + tig0027402:20193-20212 Msa1433670:intron 25.0%
! CTTTAAGTAATAGTCTATGA+AGG + tig0027402:20299-20318 Msa1433670:intron 25.0%
! GAAAACATTAAAAATGGCAA+AGG - tig0027402:20658-20677 None:intergenic 25.0%
! TAAGTTATACAGTGAAAAGA+TGG + tig0027402:20870-20889 Msa1433670:CDS 25.0%
! GAAAAGAAAATAGGCTTATT+GGG + tig0027402:21081-21100 Msa1433670:intron 25.0%
! TTATTGGGAATTTAATTAGC+TGG + tig0027402:21096-21115 Msa1433670:intron 25.0%
! TTAAAGGATATTAAGCATCT+TGG - tig0027402:21407-21426 None:intergenic 25.0%
! ATATATCATCCAATCAAATG+CGG - tig0027402:21437-21456 None:intergenic 25.0%
! GGAAAAATCATATTTACTTG+AGG + tig0027402:21528-21547 Msa1433670:intron 25.0%
! GTCTAAGTCTCTATTTATAA+AGG + tig0027402:21921-21940 Msa1433670:CDS 25.0%
!!! TTCATTTTGATTGAAATTGG+AGG + tig0027402:22021-22040 Msa1433670:CDS 25.0%
! TTGAAAGAACGAAAGAAATA+CGG - tig0027402:22194-22213 None:intergenic 25.0%
! TTATCTAGCCTACAATATAA+TGG - tig0027402:22264-22283 None:intergenic 25.0%
! TCATATAAATCGATGTAAAC+AGG - tig0027402:22318-22337 None:intergenic 25.0%
!!! GTTTTTTTCATAACCAATCT+TGG - tig0027402:22444-22463 None:intergenic 25.0%
!! TGGTAAATAGTTTTCTTTGT+TGG + tig0027402:22642-22661 Msa1433670:intron 25.0%
!! TAAATAGTTTTCTTTGTTGG+CGG + tig0027402:22645-22664 Msa1433670:intron 25.0%
!! CTTTTTATTGAAATTGCAGA+TGG + tig0027402:22817-22836 Msa1433670:intron 25.0%
! AAGATATTATTACACCAAGT+GGG - tig0027402:22848-22867 None:intergenic 25.0%
! AAAGATATTATTACACCAAG+TGG - tig0027402:22849-22868 None:intergenic 25.0%
!!! CTTTTTTCATTCTATATTGG+CGG + tig0027402:22865-22884 Msa1433670:CDS 25.0%
! AAAACTTATGATGATTCAGT+TGG + tig0027402:22967-22986 Msa1433670:exon 25.0%
!!! AGCTTTTTCATTTTTGTACA+TGG + tig0027402:23027-23046 Msa1433670:three_prime_UTR 25.0%
!!! TGTCACATTTTAGAGTAAAT+TGG + tig0027402:23210-23229 Msa1433670:three_prime_UTR 25.0%
!!! GGAGTTGTTTTTTCTAACAT+TGG + tig0027402:16124-16143 Msa1433670:five_prime_UTR 30.0%
TATCTGAAAATCGAAAGGAA+CGG - tig0027402:16319-16338 None:intergenic 30.0%
ATAACTATAAGTGGCAAATG+CGG - tig0027402:16347-16366 None:intergenic 30.0%
! TTTGCCACTTATAGTTATGA+TGG + tig0027402:16349-16368 Msa1433670:five_prime_UTR 30.0%
!! CGGTTGATGAAAATTGATAA+TGG - tig0027402:16435-16454 None:intergenic 30.0%
ATGGATGGTAAATAAATGGA+TGG + tig0027402:16748-16767 Msa1433670:intron 30.0%
TACTTAGTGTATGTTTGGAT+CGG + tig0027402:16847-16866 Msa1433670:intron 30.0%
AAACTGTTTAACCGTATGTT+TGG - tig0027402:16941-16960 None:intergenic 30.0%
!! TTTTGGGTCAATTATGGAAT+AGG + tig0027402:17030-17049 Msa1433670:intron 30.0%
GTTGCCAATTCAATAATTTG+GGG + tig0027402:17353-17372 Msa1433670:intron 30.0%
!! ATTGTTTTGTCATATCCTCT+TGG + tig0027402:17464-17483 Msa1433670:intron 30.0%
!! TTGTTTTGTCATATCCTCTT+GGG + tig0027402:17465-17484 Msa1433670:intron 30.0%
AAATCTGTACACGCAAAAAT+TGG - tig0027402:17544-17563 None:intergenic 30.0%
TCGTAACACTTATTGATGTT+TGG + tig0027402:17730-17749 Msa1433670:intron 30.0%
TAACACTTATTGATGTTTGG+TGG + tig0027402:17733-17752 Msa1433670:intron 30.0%
TACTATATAAATAGGCCTCT+AGG + tig0027402:17950-17969 Msa1433670:intron 30.0%
TACACGATAATATTTCCTAG+AGG - tig0027402:17968-17987 None:intergenic 30.0%
! AGATTTTCTGTCTCATCTTT+AGG - tig0027402:18050-18069 None:intergenic 30.0%
ACAGAAAATCTTTACAAGAG+TGG + tig0027402:18059-18078 Msa1433670:intron 30.0%
CAGAAAATCTTTACAAGAGT+GGG + tig0027402:18060-18079 Msa1433670:intron 30.0%
AGAAAATCTTTACAAGAGTG+GGG + tig0027402:18061-18080 Msa1433670:intron 30.0%
TGTTCCACATTTATCATTCA+TGG + tig0027402:18233-18252 Msa1433670:intron 30.0%
GAAACCATGAATGATAAATG+TGG - tig0027402:18240-18259 None:intergenic 30.0%
GTGATAAGAGTAAATTCTAG+TGG - tig0027402:18406-18425 None:intergenic 30.0%
! TCTTATCACATGCAGTTTTT+AGG + tig0027402:18417-18436 Msa1433670:intron 30.0%
CTCATTTAATCATGTCATAC+AGG + tig0027402:18626-18645 Msa1433670:intron 30.0%
AATCATGTCATACAGGAATA+TGG + tig0027402:18633-18652 Msa1433670:intron 30.0%
TCATACAGGAATATGGATTT+GGG + tig0027402:18640-18659 Msa1433670:intron 30.0%
CCTATAGATTTGGAAATTGA+CGG + tig0027402:18668-18687 Msa1433670:five_prime_UTR 30.0%
! GTCTTTTACATTGATACAGA+AGG + tig0027402:18704-18723 Msa1433670:five_prime_UTR 30.0%
AGTCGAATGTATATGATGAT+CGG + tig0027402:18744-18763 Msa1433670:five_prime_UTR 30.0%
CAAAAGGAAAACACAAGAAA+AGG - tig0027402:18833-18852 None:intergenic 30.0%
!!! ACATTTTTTTGGGTAAATCG+TGG + tig0027402:19150-19169 Msa1433670:five_prime_UTR 30.0%
AATAGTTGATTAGATGAACG+AGG - tig0027402:19270-19289 None:intergenic 30.0%
!!! TTTCAATTGCTGGCTTTTAT+AGG + tig0027402:19323-19342 Msa1433670:intron 30.0%
!!! TTCAATTGCTGGCTTTTATA+GGG + tig0027402:19324-19343 Msa1433670:intron 30.0%
! AACTTTATAAGCATTGCATG+AGG - tig0027402:19433-19452 None:intergenic 30.0%
!! GCTCTTTATATTTAACTTGC+AGG + tig0027402:19678-19697 Msa1433670:intron 30.0%
AGGAGACAGAAATATTGATA+TGG + tig0027402:19698-19717 Msa1433670:intron 30.0%
ATCATCAGATCAATCAAATC+CGG + tig0027402:19804-19823 Msa1433670:intron 30.0%
TATTATGGGTGACAATAGTA+CGG + tig0027402:19838-19857 Msa1433670:CDS 30.0%
!! ACTGATTTTTAGAAGACATG+AGG - tig0027402:19892-19911 None:intergenic 30.0%
ATTAAAAACACTGCTTTGGT+TGG + tig0027402:19963-19982 Msa1433670:intron 30.0%
GGCTAATTAATCCTTGAAAT+TGG + tig0027402:19984-20003 Msa1433670:intron 30.0%
ATCCATCATATGTGAAGAAA+AGG + tig0027402:20067-20086 Msa1433670:CDS 30.0%
TCCATCATATGTGAAGAAAA+GGG + tig0027402:20068-20087 Msa1433670:CDS 30.0%
! GATTTTCCTTGTACAATCTT+TGG - tig0027402:20129-20148 None:intergenic 30.0%
GTACAAGGAAAATCTCTAAA+TGG + tig0027402:20135-20154 Msa1433670:CDS 30.0%
TAAGGAGATACAAAGTAAGT+TGG + tig0027402:20462-20481 Msa1433670:intron 30.0%
AGGAGATAACTCTCTTAATT+TGG - tig0027402:20528-20547 None:intergenic 30.0%
AGAGAAAACATACTGCATAA+GGG - tig0027402:20624-20643 None:intergenic 30.0%
AAATGGCAAAGGACTAAATT+GGG - tig0027402:20647-20666 None:intergenic 30.0%
AAAATGGCAAAGGACTAAAT+TGG - tig0027402:20648-20667 None:intergenic 30.0%
ACTGGATGAAGAAATAGATA+AGG + tig0027402:21020-21039 Msa1433670:CDS 30.0%
GGAAAAGAAAATAGGCTTAT+TGG + tig0027402:21080-21099 Msa1433670:intron 30.0%
CAAATGCGGCTAAAATTTAA+AGG - tig0027402:21423-21442 None:intergenic 30.0%
!! AAATTTTAGCCGCATTTGAT+TGG + tig0027402:21425-21444 Msa1433670:intron 30.0%
!!! CTCTATTTTGATCTTGGAAT+TGG + tig0027402:21473-21492 Msa1433670:intron 30.0%
TTACTTGAGGATAATTATGC+AGG + tig0027402:21541-21560 Msa1433670:intron 30.0%
! TAAATCTTCAAAGCTTTGTG+AGG + tig0027402:21595-21614 Msa1433670:CDS 30.0%
! GCATTAAATTTTGCCATTGA+AGG - tig0027402:21674-21693 None:intergenic 30.0%
TCAATGGCAAAATTTAATGC+AGG + tig0027402:21674-21693 Msa1433670:CDS 30.0%
ATGTTAAGCATATGAAACAG+TGG - tig0027402:21863-21882 None:intergenic 30.0%
ACAAATGAATATGCAGATGT+TGG + tig0027402:21894-21913 Msa1433670:intron 30.0%
!! TTTTGATTGAAATTGGAGGA+TGG + tig0027402:22025-22044 Msa1433670:CDS 30.0%
CAACTATAAAATGCCAAACT+GGG - tig0027402:22116-22135 None:intergenic 30.0%
ATAAACACTTGTGAGATTGT+TGG + tig0027402:22352-22371 Msa1433670:intron 30.0%
CTTGGAGAGCTTATAAAAAT+AGG - tig0027402:22426-22445 None:intergenic 30.0%
! TTTTATAAGCTCTCCAAGAT+TGG + tig0027402:22428-22447 Msa1433670:intron 30.0%
TTCTTTGTCGTACTTTAAGT+CGG + tig0027402:22575-22594 Msa1433670:intron 30.0%
! AAATAGTTTTCTTTGTTGGC+GGG + tig0027402:22646-22665 Msa1433670:intron 30.0%
! TTCCATTTTCTCTTAAGCAA+TGG + tig0027402:22721-22740 Msa1433670:intron 30.0%
TGTTATGGGAAAAAGAAACA+TGG + tig0027402:22888-22907 Msa1433670:CDS 30.0%
!! CATAAGTTTTAGTCTGTTCT+TGG - tig0027402:22957-22976 None:intergenic 30.0%
GTAAAATCAACATGATACTG+TGG - tig0027402:23162-23181 None:intergenic 30.0%
TTTCTAACATTGGCCAAACA+AGG + tig0027402:16134-16153 Msa1433670:five_prime_UTR 35.0%
GTGTCCATCATAACTATAAG+TGG - tig0027402:16356-16375 None:intergenic 35.0%
ATGGTTTCAGAAGAAACAGT+TGG - tig0027402:16416-16435 None:intergenic 35.0%
!! GTTTGTTTGTTTCTGAGATC+TGG + tig0027402:16498-16517 Msa1433670:intron 35.0%
! CTGGTAACTGTTTTCAGTTT+TGG + tig0027402:16517-16536 Msa1433670:intron 35.0%
! AACCTTTTGGATCCTTTCTT+TGG + tig0027402:16558-16577 Msa1433670:intron 35.0%
AATTACCCAACTCCAAAGAA+AGG - tig0027402:16573-16592 None:intergenic 35.0%
!! TTTCTTTGGAGTTGGGTAAT+TGG + tig0027402:16572-16591 Msa1433670:intron 35.0%
!! TTCTTTGGAGTTGGGTAATT+GGG + tig0027402:16573-16592 Msa1433670:intron 35.0%
ATTCAAGCTAGCTCATGATT+TGG - tig0027402:16706-16725 None:intergenic 35.0%
! ATGAGCTAGCTTGAATTTAG+TGG + tig0027402:16710-16729 Msa1433670:intron 35.0%
! ATCGTTTGCTAATGTATGGA+TGG + tig0027402:16733-16752 Msa1433670:intron 35.0%
GATGGTAAATAAATGGATGG+TGG + tig0027402:16751-16770 Msa1433670:intron 35.0%
GTCAATTATGGAATAGGAGT+TGG + tig0027402:17036-17055 Msa1433670:intron 35.0%
CATGTACAAGAATAGAGTTG+CGG + tig0027402:17096-17115 Msa1433670:intron 35.0%
! TCTCAAGTTGTACATAGATG+TGG + tig0027402:17266-17285 Msa1433670:intron 35.0%
TGATAACAAAGAAAGAGTCC+CGG - tig0027402:17379-17398 None:intergenic 35.0%
TACAAAACTTCGTCTATCAC+AGG + tig0027402:17590-17609 Msa1433670:five_prime_UTR 35.0%
CTAATGAGGATCATCAACAT+TGG - tig0027402:18121-18140 None:intergenic 35.0%
TTCACTGTGATTCAAAGTGA+CGG + tig0027402:18180-18199 Msa1433670:intron 35.0%
ACTTTATGGCTTTCTTACTC+AGG + tig0027402:18270-18289 Msa1433670:intron 35.0%
! CTCTCTCTTTCTTGTTATGA+AGG + tig0027402:18366-18385 Msa1433670:five_prime_UTR 35.0%
TTCTCTTTGTTAGGCTTAGT+TGG + tig0027402:18567-18586 Msa1433670:intron 35.0%
GTCATACAGGAATATGGATT+TGG + tig0027402:18639-18658 Msa1433670:intron 35.0%
CATACAGGAATATGGATTTG+GGG + tig0027402:18641-18660 Msa1433670:intron 35.0%
CCGTCAATTTCCAAATCTAT+AGG - tig0027402:18671-18690 None:intergenic 35.0%
! ACAGAAGGATTTGAAAGCAT+TGG + tig0027402:18719-18738 Msa1433670:five_prime_UTR 35.0%
!! CAGAAGGATTTGAAAGCATT+GGG + tig0027402:18720-18739 Msa1433670:five_prime_UTR 35.0%
! TTCTTGTGTTTTCCTTTTGC+AGG + tig0027402:18834-18853 Msa1433670:intron 35.0%
AAGCACAGAACTTATAACAG+TGG - tig0027402:18873-18892 None:intergenic 35.0%
TATCTATAATCTGCCTGAGA+CGG + tig0027402:18892-18911 Msa1433670:five_prime_UTR 35.0%
TAAAACGAGCTCATTTCTGA+GGG - tig0027402:18932-18951 None:intergenic 35.0%
TTAAAACGAGCTCATTTCTG+AGG - tig0027402:18933-18952 None:intergenic 35.0%
! TCGCTGAAGAATTTTATGGA+AGG + tig0027402:19040-19059 Msa1433670:five_prime_UTR 35.0%
TTTGGTCACTGCTGAATAAT+TGG + tig0027402:19455-19474 Msa1433670:intron 35.0%
TTGGTCACTGCTGAATAATT+GGG + tig0027402:19456-19475 Msa1433670:intron 35.0%
ATCCAATAGAGTTGACATGA+TGG - tig0027402:19507-19526 None:intergenic 35.0%
TTTCCTTAATATCCTGCAGA+AGG + tig0027402:19535-19554 Msa1433670:intron 35.0%
TTCCTTAATATCCTGCAGAA+GGG + tig0027402:19536-19555 Msa1433670:intron 35.0%
TGATATGGTATAGTCTCTTC+TGG + tig0027402:19713-19732 Msa1433670:intron 35.0%
TCATCAGATCAATCAAATCC+GGG + tig0027402:19805-19824 Msa1433670:intron 35.0%
ACATACTTGTGGTAAGCTAA+AGG - tig0027402:19864-19883 None:intergenic 35.0%
TACGAATGAATTCCACGTTA+GGG - tig0027402:19933-19952 None:intergenic 35.0%
ATACGAATGAATTCCACGTT+AGG - tig0027402:19934-19953 None:intergenic 35.0%
! CTGTTTGAAGTCCAATTTCA+AGG - tig0027402:19998-20017 None:intergenic 35.0%
! TCCCTTTTCTTCACATATGA+TGG - tig0027402:20072-20091 None:intergenic 35.0%
TTCCTTGTACAATCTTTGGA+CGG - tig0027402:20125-20144 None:intergenic 35.0%
AACAACAGATATCTCGAACA+TGG - tig0027402:20278-20297 None:intergenic 35.0%
GAGATGCTAATAGAGAGAAA+GGG - tig0027402:20488-20507 None:intergenic 35.0%
AGAGATGCTAATAGAGAGAA+AGG - tig0027402:20489-20508 None:intergenic 35.0%
!! TTTTGTTTGATTGAGAGGGA+GGG - tig0027402:20554-20573 None:intergenic 35.0%
!! ATTTTGTTTGATTGAGAGGG+AGG - tig0027402:20555-20574 None:intergenic 35.0%
! TAAGGGTTTGTTTGGTTCAA+AGG - tig0027402:20607-20626 None:intergenic 35.0%
! ATACTGCATAAGGGTTTGTT+TGG - tig0027402:20615-20634 None:intergenic 35.0%
GAGAGAAAACATACTGCATA+AGG - tig0027402:20625-20644 None:intergenic 35.0%
ATACTTGAAGCCTTGAACAA+GGG + tig0027402:20784-20803 Msa1433670:CDS 35.0%
! TCTTGTGGAGATTTTCAACA+AGG + tig0027402:20828-20847 Msa1433670:CDS 35.0%
! GTTATAGTATAATGGGAGCT+TGG + tig0027402:21059-21078 Msa1433670:intron 35.0%
GTGATTCATAAGTCCTTCAT+AGG - tig0027402:21311-21330 None:intergenic 35.0%
!!! AGTCTGCTCTATTTTGATCT+TGG + tig0027402:21467-21486 Msa1433670:intron 35.0%
! ACTTTTGAGCATGATTGTGT+TGG + tig0027402:21716-21735 Msa1433670:CDS 35.0%
TATGAAACAGTGGCAAATCA+AGG - tig0027402:21853-21872 None:intergenic 35.0%
! TTATAAAGGAGTACAACCAC+AGG + tig0027402:21935-21954 Msa1433670:CDS 35.0%
CACTTTATTACAACCCAGTT+TGG + tig0027402:22100-22119 Msa1433670:CDS 35.0%
GCAACTATAAAATGCCAAAC+TGG - tig0027402:22117-22136 None:intergenic 35.0%
! GCATTTTATAGTTGCATCGT+GGG + tig0027402:22122-22141 Msa1433670:CDS 35.0%
TTACTTACCTGTCAAGATCA+AGG - tig0027402:22170-22189 None:intergenic 35.0%
! GCTAGATAAGTTAAGTTGTG+TGG + tig0027402:22275-22294 Msa1433670:intron 35.0%
AGATTGTTGGAAACAGCTTA+TGG + tig0027402:22365-22384 Msa1433670:intron 35.0%
TCTTTGTCGTACTTTAAGTC+GGG + tig0027402:22576-22595 Msa1433670:intron 35.0%
! AATAGTTTTCTTTGTTGGCG+GGG + tig0027402:22647-22666 Msa1433670:intron 35.0%
GAGAAAATGGAATGCAAGTA+GGG - tig0027402:22713-22732 None:intergenic 35.0%
AGAGAAAATGGAATGCAAGT+AGG - tig0027402:22714-22733 None:intergenic 35.0%
! CTCTAAAAGATAGTCAACAG+TGG - tig0027402:22747-22766 None:intergenic 35.0%
! ATTCTATATTGGCGGTGTTA+TGG + tig0027402:22873-22892 Msa1433670:CDS 35.0%
!! TTCTATATTGGCGGTGTTAT+GGG + tig0027402:22874-22893 Msa1433670:CDS 35.0%
GGAAAAAGAAACATGGATCA+CGG + tig0027402:22895-22914 Msa1433670:CDS 35.0%
TATCGGAGTGATGAACAAAA+TGG - tig0027402:22995-23014 None:intergenic 35.0%
TACATGTCAATACATGACAG+TGG - tig0027402:23261-23280 None:intergenic 35.0%
! GTCATGTATTGACATGTAGA+CGG + tig0027402:23263-23282 Msa1433670:three_prime_UTR 35.0%
! TCATGTATTGACATGTAGAC+GGG + tig0027402:23264-23283 Msa1433670:three_prime_UTR 35.0%
! GAGTCTTCATTTGTTCTAAG+AGG + tig0027402:23340-23359 Msa1433670:three_prime_UTR 35.0%
!! TCTTCATTTGTTCTAAGAGG+AGG + tig0027402:23343-23362 Msa1433670:three_prime_UTR 35.0%
!! CTTCATTTGTTCTAAGAGGA+GGG + tig0027402:23344-23363 Msa1433670:three_prime_UTR 35.0%
AAACAAGGTTTACCTTCGCA+CGG + tig0027402:16149-16168 Msa1433670:five_prime_UTR 40.0%
GTTGAAACAAGACAGCATCA+TGG - tig0027402:16210-16229 None:intergenic 40.0%
! AGGTTGTTGTTGTTGGTTGA+AGG - tig0027402:16296-16315 None:intergenic 40.0%
CTCCAAAGAAAGGATCCAAA+AGG - tig0027402:16563-16582 None:intergenic 40.0%
!! TTGGATCCTTTCTTTGGAGT+TGG + tig0027402:16564-16583 Msa1433670:intron 40.0%
!! TGGATCCTTTCTTTGGAGTT+GGG + tig0027402:16565-16584 Msa1433670:intron 40.0%
!! TCTTTGGAGTTGGGTAATTG+GGG + tig0027402:16574-16593 Msa1433670:intron 40.0%
AACCATCTCGTGAGACAAAA+TGG - tig0027402:16619-16638 None:intergenic 40.0%
! GTGGATCGTTTGCTAATGTA+TGG + tig0027402:16729-16748 Msa1433670:intron 40.0%
TTAGTGTATGTTTGGATCGG+CGG + tig0027402:16850-16869 Msa1433670:intron 40.0%
TCACAACACCACCAAACATA+CGG + tig0027402:16927-16946 Msa1433670:intron 40.0%
CTGTTTAACCGTATGTTTGG+TGG - tig0027402:16938-16957 None:intergenic 40.0%
! CCAATTCAATAATTTGGGGC+CGG + tig0027402:17357-17376 Msa1433670:intron 40.0%
! CAATTCAATAATTTGGGGCC+GGG + tig0027402:17358-17377 Msa1433670:intron 40.0%
TTGGTCATACAATACCCAAG+AGG - tig0027402:17482-17501 None:intergenic 40.0%
GTACACGCAAAAATTGGACA+AGG - tig0027402:17538-17557 None:intergenic 40.0%
!! AGTTTTGTATGACCAGGATC+AGG - tig0027402:17579-17598 None:intergenic 40.0%
!! AGACGAAGTTTTGTATGACC+AGG - tig0027402:17585-17604 None:intergenic 40.0%
AAACTTCGTCTATCACAGGA+AGG + tig0027402:17594-17613 Msa1433670:five_prime_UTR 40.0%
AACTTGGTTGCACTAGTCAA+AGG + tig0027402:17914-17933 Msa1433670:intron 40.0%
ACTTGGTTGCACTAGTCAAA+GGG + tig0027402:17915-17934 Msa1433670:intron 40.0%
GGGGAATTAGAAATTGCGAA+AGG + tig0027402:18080-18099 Msa1433670:intron 40.0%
GCAAAAAAGACTTTCCGGAA+CGG - tig0027402:18335-18354 None:intergenic 40.0%
!!! TGTTTTCTTAGGGTTTGGTG+TGG + tig0027402:18497-18516 Msa1433670:intron 40.0%
!!! GTTTTCTTAGGGTTTGGTGT+GGG + tig0027402:18498-18517 Msa1433670:intron 40.0%
ATGCGTGACACGAAAACAAA+AGG + tig0027402:18525-18544 Msa1433670:five_prime_UTR 40.0%
ACACGAAAACAAAAGGTGGA+TGG + tig0027402:18532-18551 Msa1433670:intron 40.0%
TTGGGGAACACCTATAGATT+TGG + tig0027402:18658-18677 Msa1433670:five_prime_UTR 40.0%
CAGAGCAAATATCCTGCAAA+AGG - tig0027402:18849-18868 None:intergenic 40.0%
! CTTTTGCAGGATATTTGCTC+TGG + tig0027402:18847-18866 Msa1433670:intron 40.0%
TTATGATGACTAACCGTCTC+AGG - tig0027402:18908-18927 None:intergenic 40.0%
AAAACGAGCTCATTTCTGAG+GGG - tig0027402:18931-18950 None:intergenic 40.0%
! CATCTCTAGACTCTCTTTTG+CGG + tig0027402:19011-19030 Msa1433670:five_prime_UTR 40.0%
! GAGCTCGCTGAAGAATTTTA+TGG + tig0027402:19036-19055 Msa1433670:five_prime_UTR 40.0%
CTTCACTCTATTCCAACACA+CGG - tig0027402:19227-19246 None:intergenic 40.0%
ATTAGATGAACGAGGAGCTA+AGG - tig0027402:19262-19281 None:intergenic 40.0%
ACTTACGCAGAAAATCACGT+TGG - tig0027402:19392-19411 None:intergenic 40.0%
!! AGAGTTGACATGATGGACAA+GGG - tig0027402:19500-19519 None:intergenic 40.0%
!! TAGAGTTGACATGATGGACA+AGG - tig0027402:19501-19520 None:intergenic 40.0%
GTCCATCATGTCAACTCTAT+TGG + tig0027402:19502-19521 Msa1433670:intron 40.0%
TTCCCTTCTGCAGGATATTA+AGG - tig0027402:19541-19560 None:intergenic 40.0%
AGGGAAATCAGTGCAACAAA+TGG + tig0027402:19555-19574 Msa1433670:CDS 40.0%
GAAATCAGTGCAACAAATGG+TGG + tig0027402:19558-19577 Msa1433670:CDS 40.0%
CAATCAAATCCGGGATTCAT+TGG + tig0027402:19814-19833 Msa1433670:CDS 40.0%
CCATAATAGCCAATGAATCC+CGG - tig0027402:19826-19845 None:intergenic 40.0%
! CGGGATTCATTGGCTATTAT+GGG + tig0027402:19824-19843 Msa1433670:CDS 40.0%
ATGAGGAAGACACATACTTG+TGG - tig0027402:19875-19894 None:intergenic 40.0%
TTTCCATTTCAACCCTAACG+TGG + tig0027402:19918-19937 Msa1433670:intron 40.0%
ATTCCACGTTAGGGTTGAAA+TGG - tig0027402:19924-19943 None:intergenic 40.0%
! GACAAAGCTTTGTGACTTGA+AGG + tig0027402:20032-20051 Msa1433670:CDS 40.0%
! AAGCTTTGTGACTTGAAGGA+TGG + tig0027402:20036-20055 Msa1433670:CDS 40.0%
! AGCTTTGTGACTTGAAGGAT+GGG + tig0027402:20037-20056 Msa1433670:CDS 40.0%
ATCCGTCCAAAGATTGTACA+AGG + tig0027402:20120-20139 Msa1433670:CDS 40.0%
AAAAACCAAGTACCTGCTTC+AGG - tig0027402:20179-20198 None:intergenic 40.0%
TATGGAACCTCTCCAACATT+GGG + tig0027402:20352-20371 Msa1433670:intron 40.0%
! AATTTGGTTCACAGAGCGAA+GGG - tig0027402:20512-20531 None:intergenic 40.0%
! TAATTTGGTTCACAGAGCGA+AGG - tig0027402:20513-20532 None:intergenic 40.0%
TTTGTTTGATTGAGAGGGAG+GGG - tig0027402:20553-20572 None:intergenic 40.0%
! GTTTGTTTGGTTCAAAGGAG+GGG - tig0027402:20602-20621 None:intergenic 40.0%
! GGTTTGTTTGGTTCAAAGGA+GGG - tig0027402:20603-20622 None:intergenic 40.0%
GATACTTGAAGCCTTGAACA+AGG + tig0027402:20783-20802 Msa1433670:intron 40.0%
! TGAAGATATCCTTCTGGAAG+AGG - tig0027402:20910-20929 None:intergenic 40.0%
GAAGCTTGAAGATATCCTTC+TGG - tig0027402:20916-20935 None:intergenic 40.0%
! GCATTCGATCAGCAACATTT+TGG + tig0027402:20967-20986 Msa1433670:CDS 40.0%
GGGAGCTTGGAAAAGAAAAT+AGG + tig0027402:21072-21091 Msa1433670:intron 40.0%
AAGACACTAGCAACAAACAC+AGG - tig0027402:21241-21260 None:intergenic 40.0%
AGTTCTCAAGCTTCCTTCAA+TGG + tig0027402:21658-21677 Msa1433670:CDS 40.0%
ACCTTCAAAAGCAAACTACG+AGG + tig0027402:21739-21758 Msa1433670:CDS 40.0%
CCTTCAAAAGCAAACTACGA+GGG + tig0027402:21740-21759 Msa1433670:CDS 40.0%
CAGTGGCAAATCAAGGAAAA+TGG - tig0027402:21846-21865 None:intergenic 40.0%
! ACAACCACAGGCTTTTCAAT+TGG + tig0027402:21947-21966 Msa1433670:CDS 40.0%
!! TATTTCTGGAGACCTACACA+AGG + tig0027402:22058-22077 Msa1433670:CDS 40.0%
! AGACCTACACAAGGTTGTTT+TGG + tig0027402:22067-22086 Msa1433670:CDS 40.0%
TGACCAAAACAACCTTGTGT+AGG - tig0027402:22073-22092 None:intergenic 40.0%
! GGCATTTTATAGTTGCATCG+TGG + tig0027402:22121-22140 Msa1433670:CDS 40.0%
TGTGTGGTTTCATGACTCTT+AGG + tig0027402:22291-22310 Msa1433670:intron 40.0%
GTGTGGTTTCATGACTCTTA+GGG + tig0027402:22292-22311 Msa1433670:intron 40.0%
AAATGGAATGCAAGTAGGGT+CGG - tig0027402:22709-22728 None:intergenic 40.0%
GGCCATTGCTTAAGAGAAAA+TGG - tig0027402:22726-22745 None:intergenic 40.0%
AAAAGAAACATGGATCACGG+TGG + tig0027402:22898-22917 Msa1433670:CDS 40.0%
TCATCACTCCGATATTCCTT+TGG + tig0027402:23001-23020 Msa1433670:three_prime_UTR 40.0%
CATCACTCCGATATTCCTTT+GGG + tig0027402:23002-23021 Msa1433670:three_prime_UTR 40.0%
AAATGAAAAAGCTCGCCCAA+AGG - tig0027402:23020-23039 None:intergenic 40.0%
! CAAGCACACAAAGTGTCAAA+TGG + tig0027402:23083-23102 Msa1433670:three_prime_UTR 40.0%
AAGTGTCAAATGGTGATCAG+AGG + tig0027402:23093-23112 Msa1433670:three_prime_UTR 40.0%
AGTGTCAAATGGTGATCAGA+GGG + tig0027402:23094-23113 Msa1433670:three_prime_UTR 40.0%
GTGCGAAGGTAAACCTTGTT+TGG - tig0027402:16150-16169 None:intergenic 45.0%
CTGAAAATCGAAAGGAACGG+AGG - tig0027402:16316-16335 None:intergenic 45.0%
!! AGCCATTTTGTCTCACGAGA+TGG + tig0027402:16614-16633 Msa1433670:intron 45.0%
! AGCTTTTGCCTCAGTGATTC+TGG - tig0027402:16885-16904 None:intergenic 45.0%
CCGGCCCCAAATTATTGAAT+TGG - tig0027402:17360-17379 None:intergenic 45.0%
AACAAACCCCATTGCATCTG+TGG + tig0027402:17638-17657 Msa1433670:five_prime_UTR 45.0%
TTACTGCCACAGATGCAATG+GGG - tig0027402:17647-17666 None:intergenic 45.0%
CTTACTGCCACAGATGCAAT+GGG - tig0027402:17648-17667 None:intergenic 45.0%
ACTTACTGCCACAGATGCAA+TGG - tig0027402:17649-17668 None:intergenic 45.0%
AAAGACTTTCCGGAACGGTA+CGG - tig0027402:18330-18349 None:intergenic 45.0%
CGTGACACGAAAACAAAAGG+TGG + tig0027402:18528-18547 Msa1433670:intron 45.0%
! TGCGCTGATCTTGTATTCTG+TGG + tig0027402:18773-18792 Msa1433670:intron 45.0%
CGTGTGTTGGAATAGAGTGA+AGG + tig0027402:19225-19244 Msa1433670:CDS 45.0%
CAGGTTCAAATGCAACATCC+TGG - tig0027402:19350-19369 None:intergenic 45.0%
TTGGATAAGCCACAAGAGCT+TGG - tig0027402:19373-19392 None:intergenic 45.0%
! CCGGGATTCATTGGCTATTA+TGG + tig0027402:19823-19842 Msa1433670:CDS 45.0%
GCTTTGTGACTTGAAGGATG+GGG + tig0027402:20038-20057 Msa1433670:CDS 45.0%
GTTTGTTTCCTTCCTGAAGC+AGG + tig0027402:20164-20183 Msa1433670:CDS 45.0%
ATGTTGGAGAGGTTCCATAG+AGG - tig0027402:20351-20370 None:intergenic 45.0%
CTATGGAACCTCTCCAACAT+TGG + tig0027402:20351-20370 Msa1433670:intron 45.0%
CAAATCTCCCAATGTTGGAG+AGG - tig0027402:20362-20381 None:intergenic 45.0%
CTCTCCAACATTGGGAGATT+TGG + tig0027402:20360-20379 Msa1433670:intron 45.0%
TCCAACATTGGGAGATTTGG+AGG + tig0027402:20363-20382 Msa1433670:intron 45.0%
CCAACATTGGGAGATTTGGA+GGG + tig0027402:20364-20383 Msa1433670:intron 45.0%
CAACATTGGGAGATTTGGAG+GGG + tig0027402:20365-20384 Msa1433670:intron 45.0%
TGGTTCAAAGGAGGGGAAAA+GGG - tig0027402:20595-20614 None:intergenic 45.0%
TTGGTTCAAAGGAGGGGAAA+AGG - tig0027402:20596-20615 None:intergenic 45.0%
! GGGTTTGTTTGGTTCAAAGG+AGG - tig0027402:20604-20623 None:intergenic 45.0%
TGGAATCTCTCCCTTGTTCA+AGG - tig0027402:20797-20816 None:intergenic 45.0%
AAGGGAGAGATTCCATCAAC+AGG + tig0027402:20802-20821 Msa1433670:CDS 45.0%
TCCATCAACAGGTTCTCTTG+TGG + tig0027402:20813-20832 Msa1433670:CDS 45.0%
TCCACAAGAGAACCTGTTGA+TGG - tig0027402:20817-20836 None:intergenic 45.0%
CAGTGAAAAGATGGCCACAT+TGG + tig0027402:20879-20898 Msa1433670:CDS 45.0%
TCTTCAAGCTTCCCATGACA+TGG + tig0027402:20924-20943 Msa1433670:CDS 45.0%
TTGCTGATCGAATGCTTGCA+AGG - tig0027402:20962-20981 None:intergenic 45.0%
CTGACTTCTTAGCATGGTGA+CGG - tig0027402:20993-21012 None:intergenic 45.0%
TAAGAAGTCAGTCACGCAAC+TGG + tig0027402:21002-21021 Msa1433670:CDS 45.0%
TTGTTGCTAGTGTCTTGCGT+AGG + tig0027402:21245-21264 Msa1433670:intron 45.0%
TGTTGCTAGTGTCTTGCGTA+GGG + tig0027402:21246-21265 Msa1433670:intron 45.0%
GAAGCTTGAGAACTTGAAGC+TGG - tig0027402:21652-21671 None:intergenic 45.0%
!!! CCCTCGTAGTTTGCTTTTGA+AGG - tig0027402:21743-21762 None:intergenic 45.0%
CCAACCAATTGAAAAGCCTG+TGG - tig0027402:21954-21973 None:intergenic 45.0%
! CCACAGGCTTTTCAATTGGT+TGG + tig0027402:21951-21970 Msa1433670:CDS 45.0%
! CAGGCTTTTCAATTGGTTGG+TGG + tig0027402:21954-21973 Msa1433670:CDS 45.0%
ACCTGTCAAGATCAAGGACT+GGG - tig0027402:22164-22183 None:intergenic 45.0%
TACCTGTCAAGATCAAGGAC+TGG - tig0027402:22165-22184 None:intergenic 45.0%
! GGGACTAAATCCCTTGCTAT+AGG - tig0027402:22673-22692 None:intergenic 45.0%
! TAGGGTCGGCTCAAGTATAT+GGG - tig0027402:22695-22714 None:intergenic 45.0%
AAGCTCGCCCAAAGGAATAT+CGG - tig0027402:23012-23031 None:intergenic 45.0%
TGCTTGCAACAGAACTAGGT+AGG - tig0027402:23069-23088 None:intergenic 45.0%
TGTGTGCTTGCAACAGAACT+AGG - tig0027402:23073-23092 None:intergenic 45.0%
! GGAACGGAGGTTGTTGTTGT+TGG - tig0027402:16303-16322 None:intergenic 50.0%
GAGACTTGCCAGAATCACTG+AGG + tig0027402:16874-16893 Msa1433670:intron 50.0%
CCAGGATCAGGTTCGACAAT+GGG - tig0027402:17567-17586 None:intergenic 50.0%
ACCAGGATCAGGTTCGACAA+TGG - tig0027402:17568-17587 None:intergenic 50.0%
TCGTCTATCACAGGAAGGCT+TGG + tig0027402:17599-17618 Msa1433670:five_prime_UTR 50.0%
TCTATCACAGGAAGGCTTGG+AGG + tig0027402:17602-17621 Msa1433670:five_prime_UTR 50.0%
GTAATTGGACCGTACCGTTC+CGG + tig0027402:18318-18337 Msa1433670:five_prime_UTR 50.0%
CACTTGCAATGTCCGTGTGT+TGG + tig0027402:19212-19231 Msa1433670:exon 50.0%
!!! TTGCTGGCTTTTATAGGGCC+AGG + tig0027402:19329-19348 Msa1433670:intron 50.0%
TTGAACCTGCCAAGCTCTTG+TGG + tig0027402:19361-19380 Msa1433670:CDS 50.0%
ATAAGCCACAAGAGCTTGGC+AGG - tig0027402:19369-19388 None:intergenic 50.0%
!! TGCACTGATTTCCCTTCTGC+AGG - tig0027402:19550-19569 None:intergenic 50.0%
TCAAACAGCCACATCTCCAG+CGG + tig0027402:20010-20029 Msa1433670:intron 50.0%
! AGTCACAAAGCTTTGTCCGC+TGG - tig0027402:20029-20048 None:intergenic 50.0%
TCCTTCCTGAAGCAGGTACT+TGG + tig0027402:20171-20190 Msa1433670:intron 50.0%
ACCAAGTACCTGCTTCAGGA+AGG - tig0027402:20175-20194 None:intergenic 50.0%
CCCTCCAAATCTCCCAATGT+TGG - tig0027402:20367-20386 None:intergenic 50.0%
TCAAAGGAGGGGAAAAGGGA+AGG - tig0027402:20591-20610 None:intergenic 50.0%
TGGAAGAGGTAGAGCCAATG+TGG - tig0027402:20896-20915 None:intergenic 50.0%
!! TTGGCTCTACCTCTTCCAGA+AGG + tig0027402:20898-20917 Msa1433670:CDS 50.0%
GTCACCTCTAGCCATGTCAT+GGG - tig0027402:20938-20957 None:intergenic 50.0%
! GCGTGACTGACTTCTTAGCA+TGG - tig0027402:20999-21018 None:intergenic 50.0%
GTGAGATGCTCGACCTATGA+AGG + tig0027402:21295-21314 Msa1433670:intron 50.0%
GTCCATCATGTCCTCGCAAT+CGG - tig0027402:21630-21649 None:intergenic 50.0%
AGCAAACTACGAGGGACGTA+TGG + tig0027402:21748-21767 Msa1433670:CDS 50.0%
! AGGGTCGGCTCAAGTATATG+GGG - tig0027402:22694-22713 None:intergenic 50.0%
! GTAGGGTCGGCTCAAGTATA+TGG - tig0027402:22696-22715 None:intergenic 50.0%
AGAACTAGGTAGGTGCATGC+AGG - tig0027402:23059-23078 None:intergenic 50.0%
TCAAGCCACAGAAGCTGTGT+GGG - tig0027402:23130-23149 None:intergenic 50.0%
ATCAAGCCACAGAAGCTGTG+TGG - tig0027402:23131-23150 None:intergenic 50.0%
GGTTTACCTTCGCACGGACA+AGG + tig0027402:16155-16174 Msa1433670:five_prime_UTR 55.0%
TTCGATCCTTGTCCGTGCGA+AGG - tig0027402:16164-16183 None:intergenic 55.0%
CCCATTGTCGAACCTGATCC+TGG + tig0027402:17564-17583 Msa1433670:five_prime_UTR 55.0%
GAACGAGGAGCTAAGGCATG+TGG - tig0027402:19255-19274 None:intergenic 55.0%
! AGCTTTGTCCGCTGGAGATG+TGG - tig0027402:20021-20040 None:intergenic 55.0%
TTCCATAGAGGTCGAGGTGG+GGG - tig0027402:20339-20358 None:intergenic 55.0%
GTTCCATAGAGGTCGAGGTG+GGG - tig0027402:20340-20359 None:intergenic 55.0%
GGTTCCATAGAGGTCGAGGT+GGG - tig0027402:20341-20360 None:intergenic 55.0%
AGGTTCCATAGAGGTCGAGG+TGG - tig0027402:20342-20361 None:intergenic 55.0%
GAGAGGTTCCATAGAGGTCG+AGG - tig0027402:20345-20364 None:intergenic 55.0%
TTGATTGAGAGGGAGGGGAG+AGG - tig0027402:20548-20567 None:intergenic 55.0%
GCTTCCCATGACATGGCTAG+AGG + tig0027402:20931-20950 Msa1433670:CDS 55.0%
CGTCACCTCTAGCCATGTCA+TGG - tig0027402:20939-20958 None:intergenic 55.0%
! CACCGATTGCGAGGACATGA+TGG + tig0027402:21625-21644 Msa1433670:CDS 55.0%
CTACGAGGGACGTATGGCAA+AGG + tig0027402:21754-21773 Msa1433670:CDS 55.0%
AGGGACGTATGGCAAAGGTC+TGG + tig0027402:21759-21778 Msa1433670:intron 55.0%
TTTCTCCCTCGTCACGGTTG+TGG + tig0027402:21978-21997 Msa1433670:CDS 55.0%
GCCCAGTCCTTGATCTTGAC+AGG + tig0027402:22160-22179 Msa1433670:CDS 55.0%
! GGGTCGGCTCAAGTATATGG+GGG - tig0027402:22693-22712 None:intergenic 55.0%
!! TGCAGATGGGCTATCCCACT+TGG + tig0027402:22831-22850 Msa1433670:intron 55.0%
CATCTCCCACACAGCTTCTG+TGG + tig0027402:23122-23141 Msa1433670:three_prime_UTR 55.0%
ATCCCCCACCTCGACCTCTA+TGG + tig0027402:20334-20353 Msa1433670:intron 60.0%
! GGCACTGTACACCGATTGCG+AGG + tig0027402:21616-21635 Msa1433670:CDS 60.0%
GGTGGCTTTCTCCCTCGTCA+CGG + tig0027402:21972-21991 Msa1433670:CDS 60.0%
TCCCTCGTCACGGTTGTGGT+TGG + tig0027402:21982-22001 Msa1433670:CDS 60.0%
GCCAACCACAACCGTGACGA+GGG - tig0027402:21986-22005 None:intergenic 60.0%
TCGTCACGGTTGTGGTTGGC+CGG + tig0027402:21986-22005 Msa1433670:CDS 60.0%
TGTTGGCGGGGCCTATAGCA+AGG + tig0027402:22659-22678 Msa1433670:intron 60.0%
GTTGGCGGGGCCTATAGCAA+GGG + tig0027402:22660-22679 Msa1433670:intron 60.0%
GGCCAACCACAACCGTGACG+AGG - tig0027402:21987-22006 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0027402 gene 16122 23397 16122 ID=Msa1433670;Name=Msa1433670
tig0027402 mRNA 16122 23397 16122 ID=Msa1433670-mRNA-1;Parent=Msa1433670;Name=Msa1433670-mRNA-1;_AED=0.15;_eAED=0.15;_QI=943|1|1|1|1|0.93|16|429|425
tig0027402 exon 16122 16453 16122 ID=Msa1433670-mRNA-1:exon:8752;Parent=Msa1433670-mRNA-1
tig0027402 exon 17560 17662 17560 ID=Msa1433670-mRNA-1:exon:8753;Parent=Msa1433670-mRNA-1
tig0027402 exon 18318 18387 18318 ID=Msa1433670-mRNA-1:exon:8754;Parent=Msa1433670-mRNA-1
tig0027402 exon 18508 18546 18508 ID=Msa1433670-mRNA-1:exon:8755;Parent=Msa1433670-mRNA-1
tig0027402 exon 18648 18765 18648 ID=Msa1433670-mRNA-1:exon:8756;Parent=Msa1433670-mRNA-1
tig0027402 exon 18856 18913 18856 ID=Msa1433670-mRNA-1:exon:8757;Parent=Msa1433670-mRNA-1
tig0027402 exon 18997 19246 18997 ID=Msa1433670-mRNA-1:exon:8758;Parent=Msa1433670-mRNA-1
tig0027402 exon 19345 19405 19345 ID=Msa1433670-mRNA-1:exon:8759;Parent=Msa1433670-mRNA-1
tig0027402 exon 19554 19613 19554 ID=Msa1433670-mRNA-1:exon:8760;Parent=Msa1433670-mRNA-1
tig0027402 exon 19700 19719 19700 ID=Msa1433670-mRNA-1:exon:8761;Parent=Msa1433670-mRNA-1
tig0027402 exon 19812 19877 19812 ID=Msa1433670-mRNA-1:exon:8762;Parent=Msa1433670-mRNA-1
tig0027402 exon 20018 20185 20018 ID=Msa1433670-mRNA-1:exon:8763;Parent=Msa1433670-mRNA-1
tig0027402 exon 20784 21041 20784 ID=Msa1433670-mRNA-1:exon:8764;Parent=Msa1433670-mRNA-1
tig0027402 exon 21563 21775 21563 ID=Msa1433670-mRNA-1:exon:8765;Parent=Msa1433670-mRNA-1
tig0027402 exon 21910 22181 21910 ID=Msa1433670-mRNA-1:exon:8766;Parent=Msa1433670-mRNA-1
tig0027402 exon 22836 23397 22836 ID=Msa1433670-mRNA-1:exon:8767;Parent=Msa1433670-mRNA-1
tig0027402 five_prime_UTR 16122 16453 16122 ID=Msa1433670-mRNA-1:five_prime_utr;Parent=Msa1433670-mRNA-1
tig0027402 five_prime_UTR 17560 17662 17560 ID=Msa1433670-mRNA-1:five_prime_utr;Parent=Msa1433670-mRNA-1
tig0027402 five_prime_UTR 18318 18387 18318 ID=Msa1433670-mRNA-1:five_prime_utr;Parent=Msa1433670-mRNA-1
tig0027402 five_prime_UTR 18508 18546 18508 ID=Msa1433670-mRNA-1:five_prime_utr;Parent=Msa1433670-mRNA-1
tig0027402 five_prime_UTR 18648 18765 18648 ID=Msa1433670-mRNA-1:five_prime_utr;Parent=Msa1433670-mRNA-1
tig0027402 five_prime_UTR 18856 18913 18856 ID=Msa1433670-mRNA-1:five_prime_utr;Parent=Msa1433670-mRNA-1
tig0027402 five_prime_UTR 18997 19219 18997 ID=Msa1433670-mRNA-1:five_prime_utr;Parent=Msa1433670-mRNA-1
tig0027402 CDS 19220 19246 19220 ID=Msa1433670-mRNA-1:cds;Parent=Msa1433670-mRNA-1
tig0027402 CDS 19345 19405 19345 ID=Msa1433670-mRNA-1:cds;Parent=Msa1433670-mRNA-1
tig0027402 CDS 19554 19613 19554 ID=Msa1433670-mRNA-1:cds;Parent=Msa1433670-mRNA-1
tig0027402 CDS 19700 19719 19700 ID=Msa1433670-mRNA-1:cds;Parent=Msa1433670-mRNA-1
tig0027402 CDS 19812 19877 19812 ID=Msa1433670-mRNA-1:cds;Parent=Msa1433670-mRNA-1
tig0027402 CDS 20018 20185 20018 ID=Msa1433670-mRNA-1:cds;Parent=Msa1433670-mRNA-1
tig0027402 CDS 20784 21041 20784 ID=Msa1433670-mRNA-1:cds;Parent=Msa1433670-mRNA-1
tig0027402 CDS 21563 21775 21563 ID=Msa1433670-mRNA-1:cds;Parent=Msa1433670-mRNA-1
tig0027402 CDS 21910 22181 21910 ID=Msa1433670-mRNA-1:cds;Parent=Msa1433670-mRNA-1
tig0027402 CDS 22836 22968 22836 ID=Msa1433670-mRNA-1:cds;Parent=Msa1433670-mRNA-1
tig0027402 three_prime_UTR 22969 23397 22969 ID=Msa1433670-mRNA-1:three_prime_utr;Parent=Msa1433670-mRNA-1
Gene Sequence

>Msa1433670

ATGTCCGTGTGTTGGAATAGAGTGAAGGGCCAGGATGTTGCATTTGAACCTGCCAAGCTCTTGTGGCTTATCCAACGTGATTTTCTGCAAGGGAAATCAGTGCAACAAATGGTGGATGAAGCTCTTCGACAAGTCCCTAATAAAGATAGAGACAGAAATATTGATATGATCAATCAAATCCGGGATTCATTGGCTATTATGGGTGACAATAGTACGGCCTTTAGCTTACCACAACCACATCTCCAGCGGACAAAGCTTTGTGACTTGAAGGATGGGGAGCTTGATCCATCATATGTGAAGAAAAGGGAGAAGCTAAAAGAGCTTGTTTCTAGTATAATCCGTCCAAAGATTGTACAAGGAAAATCTCTAAATGGGAAAGAGTTTGTTTCCTTCCTGAAGCAGATACTTGAAGCCTTGAACAAGGGAGAGATTCCATCAACAGGTTCTCTTGTGGAGATTTTCAACAAGGACATTCTTGAAAGATGTCTTAAGTTATACAGTGAAAAGATGGCCACATTGGCTCTACCTCTTCCAGAAGGATATCTTCAAGCTTCCCATGACATGGCTAGAGGTGACGCCTTGCAAGCATTCGATCAGCAACATTTTGGCCGTCACCATGCTAAGAAGTCAGTCACGCAACTGGATGAAGAAATAGATAAGGTATTTAAGAATGTCATTTTACAAAATGAATATAAATCTTCAAAGCTTTGTGAGGCACTGTACACCGATTGCGAGGACATGATGGACCAGCTTCAAGTTCTCAAGCTTCCTTCAATGGCAAAATTTAATGCAGGTCTCGAGAAATGCAATCGTACTTTTGAGCATGATTGTGTTGGACCTTCAAAAGCAAACTACGAGGGACGTATGGCAAAGATGTTGGTAAAGTCTAAGTCTCTATTTATAAAGGAGTACAACCACAGGCTTTTCAATTGGTTGGTGGCTTTCTCCCTCGTCACGGTTGTGGTTGGCCGGTTTATTATAAAGTTCATTTTGATTGAAATTGGAGGATGGTTACTTTTTATATTTCTGGAGACCTACACAAGGTTGTTTTGGTCAGCAGAGTCACTTTATTACAACCCAGTTTGGCATTTTATAGTTGCATCGTGGGAAACTCTTGTTTACAGCCCAGTCCTTGATCTTGACAGATGGGCTATCCCACTTGGTGTAATAATATCTTTTTTCATTCTATATTGGCGGTGTTATGGGAAAAAGAAACATGGATCACGGTGGCTATTACCATTATATAGCAGCAATAAAAATAGACCAAGAACAGACTAA
Protein sequence

>Msa1433670

MSVCWNRVKGQDVAFEPAKLLWLIQRDFLQGKSVQQMVDEALRQVPNKDRDRNIDMINQIRDSLAIMGDNSTAFSLPQPHLQRTKLCDLKDGELDPSYVKKREKLKELVSSIIRPKIVQGKSLNGKEFVSFLKQILEALNKGEIPSTGSLVEIFNKDILERCLKLYSEKMATLALPLPEGYLQASHDMARGDALQAFDQQHFGRHHAKKSVTQLDEEIDKVFKNVILQNEYKSSKLCEALYTDCEDMMDQLQVLKLPSMAKFNAGLEKCNRTFEHDCVGPSKANYEGRMAKMLVKSKSLFIKEYNHRLFNWLVAFSLVTVVVGRFIIKFILIEIGGWLLFIFLETYTRLFWSAESLYYNPVWHFIVASWETLVYSPVLDLDRWAIPLGVIISFFILYWRCYGKKKHGSRWLLPLYSSNKNRPRTD*