AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1036280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1036280 MtrunA17_Chr7g0260571 100.000 389 0 0 1 389 210 598 0.0 810
Msa1036280 MtrunA17_Chr1g0184861 73.214 392 101 2 1 389 34 424 0.0 618
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1036280 AT2G38840.2 74.219 384 99 0 1 384 53 436 0.0 627
Msa1036280 AT2G38840.1 74.219 384 99 0 1 384 211 594 0.0 626

Find 160 sgRNAs with CRISPR-Local

Find 470 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGGGATTCATTGGCTATTA+TGG 0.087308 7_1:+72640064 Msa1036280:CDS
TGATACTGACTATCTTTATT+AGG 0.166330 7_1:-72639842 None:intergenic
TGGAATCTCTCCCTTGTTTA+AGG 0.194860 7_1:-72641037 None:intergenic
GTACAAGGAAAATCTCTAAA+TGG 0.236462 7_1:+72640376 Msa1036280:CDS
GCATTCGATCAGCAACATTT+TGG 0.262273 7_1:+72641210 Msa1036280:CDS
GATCATGTCATACAGGAATA+TGG 0.275361 7_1:+72638875 Msa1036280:intron
GTCATACAGGAATATGGATT+TGG 0.280139 7_1:+72638881 Msa1036280:intron
ATTCTATATTGGCGGTGTTA+TGG 0.294127 7_1:+72643128 Msa1036280:CDS
CTCTCTCTTTCTTGTTATGA+AGG 0.295186 7_1:+72638610 Msa1036280:five_prime_UTR
GATACTGACTATCTTTATTA+GGG 0.305401 7_1:-72639841 None:intergenic
TTGGGGAACACCTATAGATT+TGG 0.306157 7_1:+72638900 Msa1036280:five_prime_UTR
TTCTATATTGGCGGTGTTAT+GGG 0.307055 7_1:+72643129 Msa1036280:CDS
AAGAGAGTAAGTGTTGAAAA+AGG 0.320653 7_1:-72643671 None:intergenic
CGGGATTCATTGGCTATTAT+GGG 0.323182 7_1:+72640065 Msa1036280:CDS
TCATACAGGAATATGGATTT+GGG 0.336399 7_1:+72638882 Msa1036280:intron
TCATCACTCCGATATTCCTT+TGG 0.339042 7_1:+72643256 Msa1036280:three_prime_UTR
CGGTTGATGAAAATTGATAA+TGG 0.341994 7_1:-72636603 None:intergenic
AGACCTACACAAGGTTGTTT+TGG 0.349932 7_1:+72642312 Msa1036280:CDS
GTCTAAGTCTCTATTTATAA+AGG 0.366560 7_1:+72642166 Msa1036280:CDS
CACTTTACTACAATCCAGTT+TGG 0.373270 7_1:+72642345 Msa1036280:CDS
CATCACTCCGATATTCCTTT+GGG 0.374851 7_1:+72643257 Msa1036280:three_prime_UTR
AGTTCTCAAGCTTCCTTCAA+TGG 0.384884 7_1:+72641903 Msa1036280:CDS
GAAGCTTGAAGATATCCTTC+TGG 0.396937 7_1:-72641156 None:intergenic
CCGTCAATTTCCAAATCTAT+AGG 0.403247 7_1:-72638910 None:intergenic
CAATCAAATCCGGGATTCAT+TGG 0.404107 7_1:+72640055 Msa1036280:CDS
ACTGTCAAGTAATAATTCAT+TGG 0.414181 7_1:-72643436 None:intergenic
ATCCATCATACGTGAAGAAA+AGG 0.416270 7_1:+72640308 Msa1036280:CDS
CAGAAGGATTTGAAAGCATT+GGG 0.417042 7_1:+72638962 Msa1036280:five_prime_UTR
TTTGCCACTTATAGTTATGA+TGG 0.420136 7_1:+72636520 Msa1036280:five_prime_UTR
GTGCGAAGGTAAACCTTGTT+TGG 0.421349 7_1:-72636318 None:intergenic
ACCATCAGATCAATCAAATC+CGG 0.423034 7_1:+72640045 Msa1036280:intron
GCAACTATAAAATGCCAAAC+TGG 0.427089 7_1:-72642359 None:intergenic
TCCACAAGAGAACCTGTTGA+TGG 0.427990 7_1:-72641057 None:intergenic
GGAACGGAGTTTGTTGTTGT+TGG 0.428823 7_1:-72636471 None:intergenic
TTTCTCCCTCGTCACGGTTG+TGG 0.429616 7_1:+72642223 Msa1036280:CDS
TACAAGGAAAATCTCTAAAT+GGG 0.432658 7_1:+72640377 Msa1036280:CDS
AAATGAACTTTATAATAAAC+CGG 0.436465 7_1:-72642250 None:intergenic
ACAGAAGGATTTGAAAGCAT+TGG 0.437082 7_1:+72638961 Msa1036280:five_prime_UTR
TATCGGAGTGATGAACAAAA+TGG 0.438346 7_1:-72643247 None:intergenic
TTGAACCTGCCAAGCTCTTG+TGG 0.441248 7_1:+72639602 Msa1036280:five_prime_UTR
AGGAGACAGAAATATTGATA+TGG 0.448597 7_1:+72639939 Msa1036280:intron
TGTGTGCTTGCAACAAAACT+AGG 0.450181 7_1:-72643325 None:intergenic
CCCATTGTCGAACCTGATCC+TGG 0.459576 7_1:+72637806 Msa1036280:five_prime_UTR
TCGTCACGGTTGTGGTTGGC+CGG 0.460211 7_1:+72642231 Msa1036280:CDS
AAGCTCGCCCAAAGGAATAT+CGG 0.466643 7_1:-72643264 None:intergenic
GTTTGTTTCCTTCCTGAAGC+AGG 0.468484 7_1:+72640405 Msa1036280:CDS
GACAAAGCTCTGTGATTTGA+AGG 0.474122 7_1:+72640273 Msa1036280:CDS
ATAAGCCACAAGAGCTTGGC+AGG 0.474426 7_1:-72639607 None:intergenic
CTTACTGCCACAGATGCAAT+GGG 0.475076 7_1:-72637887 None:intergenic
TTATGATGACTAACCGTCTC+AGG 0.475662 7_1:-72639145 None:intergenic
GTCCATCATGTCCTCGCAAT+CGG 0.478174 7_1:-72641872 None:intergenic
AATCACAGAGCTTTGTCCGC+TGG 0.480181 7_1:-72640267 None:intergenic
CCAGGATCAGGTTCGACAAT+GGG 0.480240 7_1:-72637806 None:intergenic
AAGGGAGAGATTCCATCAAC+AGG 0.484642 7_1:+72641045 Msa1036280:CDS
CCTATAGATTTGGAAATTGA+CGG 0.485037 7_1:+72638910 Msa1036280:five_prime_UTR
AGCTCTGTGATTTGAAGGAT+GGG 0.491154 7_1:+72640278 Msa1036280:CDS
TTACTTACCTGTCAAGATCA+AGG 0.494526 7_1:-72642412 None:intergenic
AGTTTGTTGTTGTTGGTTGA+AGG 0.495530 7_1:-72636464 None:intergenic
AAAACTTATGATGATTCAGT+TGG 0.497813 7_1:+72643222 Msa1036280:exon
TCGTCTATCACAGGAAGGCT+TGG 0.499537 7_1:+72637841 Msa1036280:five_prime_UTR
TCCCTCGTCACGGTTGTGGT+TGG 0.503251 7_1:+72642227 Msa1036280:CDS
TACATGTCAATATACGATAG+TGG 0.503402 7_1:-72643513 None:intergenic
TAAGTTATACAGTGAAAAGA+TGG 0.504761 7_1:+72641113 Msa1036280:CDS
GAGTCTTCATTTGTTCTAAG+AGG 0.506255 7_1:+72643595 Msa1036280:three_prime_UTR
GCCCAGTCCTTGATCTTGAC+AGG 0.508041 7_1:+72642405 Msa1036280:CDS
TTCGATCCTTGTCCGTGCGA+AGG 0.508281 7_1:-72636332 None:intergenic
CACTTGCAATCTCCGTGTGT+TGG 0.509709 7_1:+72639453 Msa1036280:five_prime_UTR
AAGCTCTGTGATTTGAAGGA+TGG 0.512370 7_1:+72640277 Msa1036280:CDS
TGAAGATATCCTTCTGGAAG+AGG 0.514011 7_1:-72641150 None:intergenic
TAAGAAGTCAGTCACACAAC+TGG 0.517441 7_1:+72641245 Msa1036280:CDS
CATCTCCCACACAGCTTCTG+TGG 0.517600 7_1:+72643377 Msa1036280:three_prime_UTR
ATACTTGAAGCCTTAAACAA+GGG 0.518090 7_1:+72641027 Msa1036280:CDS
CAAGCACACAAAGTGTCAAA+TGG 0.522477 7_1:+72643338 Msa1036280:three_prime_UTR
TGCAGATGGGCTATCCCACT+TGG 0.526646 7_1:+72643086 Msa1036280:intron
AGGGAAATCAGTGCAACAAA+TGG 0.528159 7_1:+72639796 Msa1036280:exon
CTTCATTTGTTCTAAGAGGA+GGG 0.529334 7_1:+72643599 Msa1036280:three_prime_UTR
TCAATGGCAAAATTTAATGC+AGG 0.530565 7_1:+72641919 Msa1036280:CDS
TGAATTGAATTTACTGAACA+AGG 0.530929 7_1:-72636411 None:intergenic
GTAATTGGACCTTACCGCTC+CGG 0.531290 7_1:+72638562 Msa1036280:five_prime_UTR
GGTGGCTTTCTCCCTCGTCA+CGG 0.533465 7_1:+72642217 Msa1036280:CDS
AGCAAACTACGAGGGACGTA+TGG 0.536139 7_1:+72641993 Msa1036280:CDS
GTGTCCATCATAACTATAAG+TGG 0.536238 7_1:-72636524 None:intergenic
CGTCACCTCTAGCCATGTCA+TGG 0.537341 7_1:-72641179 None:intergenic
ACTTACTGCCACAGATGCAA+TGG 0.537826 7_1:-72637888 None:intergenic
TCTTCATTTGTTCTAAGAGG+AGG 0.539985 7_1:+72643598 Msa1036280:three_prime_UTR
CAGGTTCAAATGCAACATCC+TGG 0.541309 7_1:-72639588 None:intergenic
ATGGTTTCAGAAGAAACAGT+TGG 0.542034 7_1:-72636584 None:intergenic
CCATAATAGCCAATGAATCC+CGG 0.544948 7_1:-72640064 None:intergenic
AACAAACCCCATTGCATCTG+TGG 0.545406 7_1:+72637880 Msa1036280:five_prime_UTR
AGCTTTGTCCGCTGGAGATG+TGG 0.546735 7_1:-72640259 None:intergenic
TTGGATAAGCCACAAGAGCT+TGG 0.550189 7_1:-72639611 None:intergenic
ACTGGATGAAGAAATAGATA+AGG 0.553071 7_1:+72641263 Msa1036280:CDS
TTTCTAACATTGGCCAAACA+AGG 0.553880 7_1:+72636305 Msa1036280:five_prime_UTR
ATCCGTCCAAAGATTGTACA+AGG 0.558214 7_1:+72640361 Msa1036280:CDS
TCCATCATACGTGAAGAAAA+GGG 0.559653 7_1:+72640309 Msa1036280:CDS
TCCATCAACAGGTTCTCTTG+TGG 0.561510 7_1:+72641056 Msa1036280:CDS
GAAGCTTGAGAACTTGAAGC+TGG 0.561670 7_1:-72641894 None:intergenic
TTCCTTGTACAATCTTTGGA+CGG 0.563359 7_1:-72640363 None:intergenic
AAAGACTTTCCGGAGCGGTA+AGG 0.567805 7_1:-72638571 None:intergenic
AAAACTAGGTAGGTGCATGC+AGG 0.569739 7_1:-72643311 None:intergenic
TACCTGTCAAGATCAAGGAC+TGG 0.569959 7_1:-72642407 None:intergenic
TACAAAACTTCGTCTATCAC+AGG 0.570289 7_1:+72637832 Msa1036280:five_prime_UTR
GAAATCAGTGCAACAAATGG+TGG 0.572848 7_1:+72639799 Msa1036280:exon
AAAGATATTATTACACCAAG+TGG 0.576063 7_1:-72643101 None:intergenic
CAGTGAAAAGATGGCCACAT+TGG 0.576184 7_1:+72641122 Msa1036280:CDS
GTTGAAACAAGACAACATCA+TGG 0.576533 7_1:-72636378 None:intergenic
ATCGTATATTGACATGTAGA+CGG 0.578820 7_1:+72643518 Msa1036280:three_prime_UTR
CCATCAGATCAATCAAATCC+GGG 0.579168 7_1:+72640046 Msa1036280:intron
TGGCGTGATCTCTGTAGCCA+CGG 0.579326 7_1:+72643397 Msa1036280:three_prime_UTR
GGTTTACCTTCGCACGGACA+AGG 0.580176 7_1:+72636326 Msa1036280:five_prime_UTR
GATACTTGAAGCCTTAAACA+AGG 0.581252 7_1:+72641026 Msa1036280:intron
ACATACTTGTGGTAAGCTAA+AGG 0.582503 7_1:-72640102 None:intergenic
TCGTATATTGACATGTAGAC+GGG 0.586800 7_1:+72643519 Msa1036280:three_prime_UTR
ACTTACGCAGAAAATCTCGT+TGG 0.587075 7_1:-72639630 None:intergenic
CACCGATTGCGAGGACATGA+TGG 0.588869 7_1:+72641870 Msa1036280:CDS
TATCTATAATCTGCCTGAGA+CGG 0.594970 7_1:+72639132 Msa1036280:five_prime_UTR
AAGATATTATTACACCAAGT+GGG 0.595317 7_1:-72643100 None:intergenic
GCCAACCACAACCGTGACGA+GGG 0.595392 7_1:-72642228 None:intergenic
AGTCGAATGTATATGATGAT+CGG 0.595943 7_1:+72638986 Msa1036280:five_prime_UTR
GGCCAACCACAACCGTGACG+AGG 0.597641 7_1:-72642229 None:intergenic
TCACGCCACAGAAGCTGTGT+GGG 0.597649 7_1:-72643382 None:intergenic
TTGCTGATCGAATGCTTGCA+TGG 0.600379 7_1:-72641202 None:intergenic
TTTGATATCTGAAAATCGAA+AGG 0.602266 7_1:-72636492 None:intergenic
ACCAGGATCAGGTTCGACAA+TGG 0.602966 7_1:-72637807 None:intergenic
TCTTCAAGCTTCCCATGACA+TGG 0.604681 7_1:+72641167 Msa1036280:CDS
AAACAAGGTTTACCTTCGCA+CGG 0.606024 7_1:+72636320 Msa1036280:five_prime_UTR
GTCACCTCTAGCCATGTCAT+GGG 0.607351 7_1:-72641178 None:intergenic
TAAATCTTCAAAGCTTTGTG+AGG 0.609297 7_1:+72641840 Msa1036280:CDS
AGTGTCAAATGGTGATCAGA+GGG 0.609348 7_1:+72643349 Msa1036280:three_prime_UTR
ACCTGTCAAGATCAAGGACT+GGG 0.612834 7_1:-72642406 None:intergenic
ACCAAGTACCTGCTTCAGGA+AGG 0.616523 7_1:-72640413 None:intergenic
AAGTGTCAAATGGTGATCAG+AGG 0.619570 7_1:+72643348 Msa1036280:three_prime_UTR
TTATAAAGGAGTACAACCAC+AGG 0.623382 7_1:+72642180 Msa1036280:CDS
GCTTCCCATGACATGGCTAG+AGG 0.624847 7_1:+72641174 Msa1036280:CDS
CTACGAGGGACGTATGGCAA+AGG 0.627470 7_1:+72641999 Msa1036280:CDS
GGCACTGTACACCGATTGCG+AGG 0.628615 7_1:+72641861 Msa1036280:CDS
ATCACGCCACAGAAGCTGTG+TGG 0.629469 7_1:-72643383 None:intergenic
ATGCGTGACACGAAAACCAA+AGG 0.646130 7_1:+72638767 Msa1036280:five_prime_UTR
CGTGTGTTGGAATAGAGTGA+AGG 0.649769 7_1:+72639466 Msa1036280:five_prime_UTR
GTGTGACTGACTTCTTAGCA+TGG 0.652881 7_1:-72641239 None:intergenic
CTGACTTCTTAGCATGGTGA+CGG 0.653596 7_1:-72641233 None:intergenic
TGGAAGAGGTAGAGCCAATG+TGG 0.653977 7_1:-72641136 None:intergenic
AAACTTCGTCTATCACAGGA+AGG 0.654561 7_1:+72637836 Msa1036280:five_prime_UTR
TGACCAAAACAACCTTGTGT+AGG 0.656892 7_1:-72642315 None:intergenic
GCTCTGTGATTTGAAGGATG+GGG 0.658848 7_1:+72640279 Msa1036280:CDS
CTTCACTCTATTCCAACACA+CGG 0.660720 7_1:-72639465 None:intergenic
TTGGCTCTACCTCTTCCAGA+AGG 0.665756 7_1:+72641141 Msa1036280:CDS
ATAACTATAAGTGGCAAATG+CGG 0.668267 7_1:-72636515 None:intergenic
CATACAGGAATATGGATTTG+GGG 0.676634 7_1:+72638883 Msa1036280:intron
GTAAAATCAACATGATACCG+TGG 0.682009 7_1:-72643414 None:intergenic
ACCTTCAAAAGCAAACTACG+AGG 0.688387 7_1:+72641984 Msa1036280:CDS
TCAAACAGCCACATCTCCAG+CGG 0.692057 7_1:+72640251 Msa1036280:intron
AAGCACAGAACTTATTACAG+TGG 0.700561 7_1:-72639110 None:intergenic
CCTTCAAAAGCAAACTACGA+GGG 0.700718 7_1:+72641985 Msa1036280:CDS
TATCTGAAAATCGAAAGGAA+CGG 0.702929 7_1:-72636487 None:intergenic
TATTTCTGGAGACCTACACA+AGG 0.706921 7_1:+72642303 Msa1036280:CDS
CCAACCAATTGAAAAGCCTG+TGG 0.707705 7_1:-72642196 None:intergenic
TGCTTGCAACAAAACTAGGT+AGG 0.738511 7_1:-72643321 None:intergenic
TTACTGCCACAGATGCAATG+GGG 0.746702 7_1:-72637886 None:intergenic
AAAAGAAACATGGATCACGG+TGG 0.783518 7_1:+72643153 Msa1036280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAAAATTCAATTTTTATG+AGG + chr7_1:72636844-72636863 Msa1036280:intron 10.0%
!!! TCAAATATGTTATATATTTT+TGG + chr7_1:72641401-72641420 Msa1036280:intron 10.0%
!! CAATAAAAAAAAAAAAAAAG+AGG + chr7_1:72643633-72643652 Msa1036280:three_prime_UTR 10.0%
!!! TAGAAGTCAATTTTATTTTT+GGG + chr7_1:72637261-72637280 Msa1036280:intron 15.0%
!! TAAGAAACATAAAAAAAAGT+TGG - chr7_1:72637670-72637689 None:intergenic 15.0%
!! TTAGCTAAAATTATTATGAA+TGG + chr7_1:72638381-72638400 Msa1036280:intron 15.0%
!!! CTAATATATTTGTTTTCTTA+GGG + chr7_1:72638729-72638748 Msa1036280:intron 15.0%
!! GTAATATTATTACTGATAAT+TGG - chr7_1:72639990-72640009 None:intergenic 15.0%
!! AATATTCGTTATAGTATAAT+GGG + chr7_1:72641295-72641314 Msa1036280:intron 15.0%
!! AAATGAACTTTATAATAAAC+CGG - chr7_1:72642253-72642272 None:intergenic 15.0%
!!! ATCAAACTAACAATATTTTA+TGG + chr7_1:72643024-72643043 Msa1036280:intron 15.0%
!!! TATCTTTTTTCATTCTATAT+TGG + chr7_1:72643117-72643136 Msa1036280:CDS 15.0%
!! TAAAAAAAAAAAAAAAGAGG+TGG + chr7_1:72643636-72643655 Msa1036280:three_prime_UTR 15.0%
!! AAAAAAAAAAAAAAAGAGGT+GGG + chr7_1:72643637-72643656 Msa1036280:three_prime_UTR 15.0%
!! AAAGAGATAAAAGAAACTTA+CGG - chr7_1:72636626-72636645 None:intergenic 20.0%
!!! TTGTTAAAGTTAAAACCTTT+TGG + chr7_1:72636747-72636766 Msa1036280:intron 20.0%
!!! TTCAATTTTTATGAGGTTAA+CGG + chr7_1:72636851-72636870 Msa1036280:intron 20.0%
!! ACTAAGTAATCTTCATTAAT+TGG - chr7_1:72637037-72637056 None:intergenic 20.0%
!!! GTAGAAGTCAATTTTATTTT+TGG + chr7_1:72637260-72637279 Msa1036280:intron 20.0%
!!! TTTTATTTTTGGGTCAATTA+TGG + chr7_1:72637271-72637290 Msa1036280:intron 20.0%
!!! CATTTTGTTTATATTATGGA+GGG - chr7_1:72637432-72637451 None:intergenic 20.0%
!! CTCCATAATATAAACAAAAT+GGG + chr7_1:72637431-72637450 Msa1036280:intron 20.0%
!!! TTCCCATTTTGTTTATATTA+TGG - chr7_1:72637436-72637455 None:intergenic 20.0%
!! TGGTGATAAATTGTTAATTT+AGG + chr7_1:72637528-72637547 Msa1036280:intron 20.0%
!! TGATAAATTGTTAATTTAGG+TGG + chr7_1:72637531-72637550 Msa1036280:intron 20.0%
!! GTTTGAATTTAGAAAACAAA+AGG - chr7_1:72637933-72637952 None:intergenic 20.0%
!! GAAATAATGACTTATCTAAA+TGG - chr7_1:72638051-72638070 None:intergenic 20.0%
!! ACATGTAAGTCTTAATATTT+CGG + chr7_1:72638244-72638263 Msa1036280:intron 20.0%
!!! TTTCTACTTTTATCACTTTA+TGG + chr7_1:72638500-72638519 Msa1036280:intron 20.0%
!!! GCTAATATATTTGTTTTCTT+AGG + chr7_1:72638728-72638747 Msa1036280:intron 20.0%
!! ACATCAAATTAACAACAAAA+AGG - chr7_1:72639541-72639560 None:intergenic 20.0%
!! CAGTAATAATATTACTAGTT+TGG + chr7_1:72639995-72640014 Msa1036280:intron 20.0%
!!! TTTTATTAAAAACACTGCTT+TGG + chr7_1:72640200-72640219 Msa1036280:intron 20.0%
!!! AATGTAGCATAGTTTTTTTA+AGG + chr7_1:72640686-72640705 Msa1036280:intron 20.0%
!!! AATATTTTGTTTGATTGAGA+GGG - chr7_1:72640800-72640819 None:intergenic 20.0%
!!! AAATATTTTGTTTGATTGAG+AGG - chr7_1:72640801-72640820 None:intergenic 20.0%
!!! TAAAAGATAAAGCTGTTTTA+TGG - chr7_1:72640993-72641012 None:intergenic 20.0%
!! GAATATTCGTTATAGTATAA+TGG + chr7_1:72641294-72641313 Msa1036280:intron 20.0%
!!! TTTGAAGCTTATATTTACTA+TGG + chr7_1:72641751-72641770 Msa1036280:intron 20.0%
!! TTGAAGCTTATATTTACTAT+GGG + chr7_1:72641752-72641771 Msa1036280:intron 20.0%
!!! CATATTCATTTGTTACATTA+AGG - chr7_1:72642132-72642151 None:intergenic 20.0%
!!! AAGTTCATTTTGATTGAAAT+TGG + chr7_1:72642263-72642282 Msa1036280:CDS 20.0%
!!! ATGGTTACTTTTTATATTTC+TGG + chr7_1:72642289-72642308 Msa1036280:CDS 20.0%
!!! TTTAAGATCCATTTTATTGT+AGG + chr7_1:72642498-72642517 Msa1036280:intron 20.0%
!! TGTTTGATTCATAAAAACTA+TGG + chr7_1:72642877-72642896 Msa1036280:intron 20.0%
!!! TTTTTATTGAAATTGCAGAT+GGG + chr7_1:72643073-72643092 Msa1036280:intron 20.0%
!!! TTTTTATTGCTGCTATATAA+TGG - chr7_1:72643185-72643204 None:intergenic 20.0%
! TGAATTGAATTTACTGAACA+AGG - chr7_1:72636414-72636433 None:intergenic 25.0%
! TTTGATATCTGAAAATCGAA+AGG - chr7_1:72636495-72636514 None:intergenic 25.0%
! AAAGAATGAAAGATTGTGTA+AGG - chr7_1:72636719-72636738 None:intergenic 25.0%
! ATGTATGGATGGTAAATAAA+TGG + chr7_1:72636946-72636965 Msa1036280:intron 25.0%
! AAGATTACTTAGTGTATGTT+TGG + chr7_1:72637044-72637063 Msa1036280:intron 25.0%
! AATATATATACAACTCCAGA+TGG - chr7_1:72637179-72637198 None:intergenic 25.0%
!! ACTCTTGAGTTTTTCTTTTT+TGG + chr7_1:72637230-72637249 Msa1036280:intron 25.0%
! TAAGAATAGAAGATATTGTG+AGG + chr7_1:72637317-72637336 Msa1036280:intron 25.0%
!!! CCATTTTGTTTATATTATGG+AGG - chr7_1:72637433-72637452 None:intergenic 25.0%
! CCTCCATAATATAAACAAAA+TGG + chr7_1:72637430-72637449 Msa1036280:intron 25.0%
! ATGTTGCCAATTCAATAATT+TGG + chr7_1:72637593-72637612 Msa1036280:intron 25.0%
! TGTTGCCAATTCAATAATTT+GGG + chr7_1:72637594-72637613 Msa1036280:intron 25.0%
! GATATGACAAAACAATAACA+AGG - chr7_1:72637702-72637721 None:intergenic 25.0%
! CATAACTAACAAAAGAAGTT+TGG - chr7_1:72637743-72637762 None:intergenic 25.0%
! AAATCTGTACACACAAAAAT+TGG - chr7_1:72637786-72637805 None:intergenic 25.0%
! ACAGCAGATAGAAAATAAAT+AGG + chr7_1:72638186-72638205 Msa1036280:intron 25.0%
!! TACACCATAATATTTTCTAG+AGG - chr7_1:72638212-72638231 None:intergenic 25.0%
!!! CATAATAATTTTAGCTAACG+AGG - chr7_1:72638379-72638398 None:intergenic 25.0%
!! ACTTTATGGTTTTCTTAATC+AGG + chr7_1:72638514-72638533 Msa1036280:intron 25.0%
!! CTTTATGGTTTTCTTAATCA+GGG + chr7_1:72638515-72638534 Msa1036280:intron 25.0%
!! TTTATGGTTTTCTTAATCAG+GGG + chr7_1:72638516-72638535 Msa1036280:intron 25.0%
!!! TGCTTTTTTTATCAGGTAAT+TGG + chr7_1:72638547-72638566 Msa1036280:intron 25.0%
! ATTAAGCAAAAAAGACTTTC+CGG - chr7_1:72638584-72638603 None:intergenic 25.0%
!!! ATATTTGTTTTCTTAGGGTT+TGG + chr7_1:72638734-72638753 Msa1036280:intron 25.0%
!!! GAGAATAAAACATTTTAGCA+TGG - chr7_1:72639206-72639225 None:intergenic 25.0%
!!! TCTGCTTTGTAACAATTTTT+TGG + chr7_1:72639380-72639399 Msa1036280:five_prime_UTR 25.0%
!!! CTGCTTTGTAACAATTTTTT+GGG + chr7_1:72639381-72639400 Msa1036280:five_prime_UTR 25.0%
!!! ACAATTTTTTGGGTAAATTG+TGG + chr7_1:72639391-72639410 Msa1036280:five_prime_UTR 25.0%
! AATAATTGATTAGATGAACG+AGG - chr7_1:72639511-72639530 None:intergenic 25.0%
!!! TTGATGTATTTTTCAATTGC+TGG + chr7_1:72639554-72639573 Msa1036280:intron 25.0%
!! CAATGCTCATAAAGTTATTT+TGG + chr7_1:72639678-72639697 Msa1036280:intron 25.0%
!! GATACTGACTATCTTTATTA+GGG - chr7_1:72639844-72639863 None:intergenic 25.0%
!! TGATACTGACTATCTTTATT+AGG - chr7_1:72639845-72639864 None:intergenic 25.0%
! TACAAGGAAAATCTCTAAAT+GGG + chr7_1:72640377-72640396 Msa1036280:CDS 25.0%
!! GTTTTTCATGTTCTCTTTAA+TGG + chr7_1:72640434-72640453 Msa1036280:intron 25.0%
!!! AACTTATTTTTCCATGTTAG+TGG + chr7_1:72640505-72640524 Msa1036280:intron 25.0%
! CTTTAAGTAATAGTCTATGA+AGG + chr7_1:72640540-72640559 Msa1036280:intron 25.0%
!! ACTATGCTACATTTTATACA+AGG - chr7_1:72640679-72640698 None:intergenic 25.0%
!!! AGTTGTGAAATTTTTTCCAT+CGG - chr7_1:72640922-72640941 None:intergenic 25.0%
! TAAGTTATACAGTGAAAAGA+TGG + chr7_1:72641113-72641132 Msa1036280:CDS 25.0%
! GAAAAGAAAATAGGCTTATT+GGG + chr7_1:72641324-72641343 Msa1036280:intron 25.0%
! TTATTGGGAATTTAATTAGC+TGG + chr7_1:72641339-72641358 Msa1036280:intron 25.0%
! TTAAAGGATAATAAGCATCT+TGG - chr7_1:72641653-72641672 None:intergenic 25.0%
! ATATATCATCCAATCAAATG+CGG - chr7_1:72641683-72641702 None:intergenic 25.0%
! GGAAAAATCATATTTACTTG+AGG + chr7_1:72641773-72641792 Msa1036280:intron 25.0%
! GTCTAAGTCTCTATTTATAA+AGG + chr7_1:72642166-72642185 Msa1036280:CDS 25.0%
!!! TTCATTTTGATTGAAATTGG+AGG + chr7_1:72642266-72642285 Msa1036280:CDS 25.0%
! TTGAAAGAACGAAAGAAATA+CGG - chr7_1:72642439-72642458 None:intergenic 25.0%
! TTATCTAGCCTACAATAAAA+TGG - chr7_1:72642509-72642528 None:intergenic 25.0%
!! TGGTAAATAGTTTTCTTTGT+TGG + chr7_1:72642897-72642916 Msa1036280:intron 25.0%
!! TAAATAGTTTTCTTTGTTGG+TGG + chr7_1:72642900-72642919 Msa1036280:intron 25.0%
!! AAATAGTTTTCTTTGTTGGT+GGG + chr7_1:72642901-72642920 Msa1036280:intron 25.0%
!! CTTTTTATTGAAATTGCAGA+TGG + chr7_1:72643072-72643091 Msa1036280:intron 25.0%
! AAGATATTATTACACCAAGT+GGG - chr7_1:72643103-72643122 None:intergenic 25.0%
! AAAGATATTATTACACCAAG+TGG - chr7_1:72643104-72643123 None:intergenic 25.0%
!!! CTTTTTTCATTCTATATTGG+CGG + chr7_1:72643120-72643139 Msa1036280:CDS 25.0%
! AAAACTTATGATGATTCAGT+TGG + chr7_1:72643222-72643241 Msa1036280:exon 25.0%
! ACTGTCAAGTAATAATTCAT+TGG - chr7_1:72643439-72643458 None:intergenic 25.0%
!!! TGTCACATTTTAGAGTAAAT+TGG + chr7_1:72643465-72643484 Msa1036280:three_prime_UTR 25.0%
!!! GGAGTTGTTTTTTCTAACAT+TGG + chr7_1:72636295-72636314 Msa1036280:five_prime_UTR 30.0%
TATCTGAAAATCGAAAGGAA+CGG - chr7_1:72636490-72636509 None:intergenic 30.0%
ATAACTATAAGTGGCAAATG+CGG - chr7_1:72636518-72636537 None:intergenic 30.0%
! TTTGCCACTTATAGTTATGA+TGG + chr7_1:72636520-72636539 Msa1036280:five_prime_UTR 30.0%
!! CGGTTGATGAAAATTGATAA+TGG - chr7_1:72636606-72636625 None:intergenic 30.0%
ATGGATGGTAAATAAATGGA+TGG + chr7_1:72636950-72636969 Msa1036280:intron 30.0%
TACTTAGTGTATGTTTGGAT+CGG + chr7_1:72637049-72637068 Msa1036280:intron 30.0%
TAAGTGTTTAACCGTATGTT+TGG - chr7_1:72637143-72637162 None:intergenic 30.0%
AAACATACGGTTAAACACTT+AGG + chr7_1:72637142-72637161 Msa1036280:intron 30.0%
!! TTTTGGGTCAATTATGGAAT+AGG + chr7_1:72637277-72637296 Msa1036280:intron 30.0%
GTTGCCAATTCAATAATTTG+GGG + chr7_1:72637595-72637614 Msa1036280:intron 30.0%
!! ATTGTTTTGTCATATCCTCT+TGG + chr7_1:72637706-72637725 Msa1036280:intron 30.0%
!! TTGTTTTGTCATATCCTCTT+GGG + chr7_1:72637707-72637726 Msa1036280:intron 30.0%
TCGTAACACTTATTGATGTT+TGG + chr7_1:72637972-72637991 Msa1036280:intron 30.0%
TAACACTTATTGATGTTTGG+TGG + chr7_1:72637975-72637994 Msa1036280:intron 30.0%
! ATGGATTATGCTATTCAACA+TGG - chr7_1:72638032-72638051 None:intergenic 30.0%
ATATCAATTAGCAACACACT+CGG - chr7_1:72638075-72638094 None:intergenic 30.0%
! TTCTAAGAAAATGTAACAGC+AGG - chr7_1:72638105-72638124 None:intergenic 30.0%
! TAGGCCTCTAGAAAATATTA+TGG + chr7_1:72638205-72638224 Msa1036280:intron 30.0%
! AGATTTTCTGTCACATCTTT+AGG - chr7_1:72638294-72638313 None:intergenic 30.0%
AGAAAATCTTTACAAGAGTG+AGG + chr7_1:72638305-72638324 Msa1036280:intron 30.0%
GAAACCATGAATGATAAATG+CGG - chr7_1:72638484-72638503 None:intergenic 30.0%
!!! TTGTTGCTGCTTTTTTTATC+AGG + chr7_1:72638540-72638559 Msa1036280:intron 30.0%
! TCTTATCACATGCAGTTTTT+AGG + chr7_1:72638661-72638680 Msa1036280:intron 30.0%
! TTCTCTTTGTTATGCTTAGT+TGG + chr7_1:72638809-72638828 Msa1036280:intron 30.0%
TCATACAGGAATATGGATTT+GGG + chr7_1:72638882-72638901 Msa1036280:intron 30.0%
CCTATAGATTTGGAAATTGA+CGG + chr7_1:72638910-72638929 Msa1036280:five_prime_UTR 30.0%
! GTCTTTTACATTGATACAGA+AGG + chr7_1:72638946-72638965 Msa1036280:five_prime_UTR 30.0%
AGTCGAATGTATATGATGAT+CGG + chr7_1:72638986-72639005 Msa1036280:five_prime_UTR 30.0%
CAAAAGGAAAACACAAGAAA+AGG - chr7_1:72639073-72639092 None:intergenic 30.0%
!! GAGCTCGTTTTAAATTTTTG+AGG + chr7_1:72639180-72639199 Msa1036280:intron 30.0%
! TTGCTGAAGAATTTTATGGA+AGG + chr7_1:72639280-72639299 Msa1036280:five_prime_UTR 30.0%
!!! TTTCAATTGCTGGCTTTTAT+AGG + chr7_1:72639564-72639583 Msa1036280:intron 30.0%
!!! TTCAATTGCTGGCTTTTATA+GGG + chr7_1:72639565-72639584 Msa1036280:intron 30.0%
!! GCTCTTTATATTTAACTTGC+AGG + chr7_1:72639919-72639938 Msa1036280:intron 30.0%
AGGAGACAGAAATATTGATA+TGG + chr7_1:72639939-72639958 Msa1036280:intron 30.0%
!! ACTGATTTTTAGAAGACATG+AGG - chr7_1:72640133-72640152 None:intergenic 30.0%
TAAGAATGAATTCCACGTTA+GGG - chr7_1:72640174-72640193 None:intergenic 30.0%
ATAAGAATGAATTCCACGTT+AGG - chr7_1:72640175-72640194 None:intergenic 30.0%
ATTAAAAACACTGCTTTGGT+TGG + chr7_1:72640204-72640223 Msa1036280:intron 30.0%
! CTGTTTGAAGTCAAATTTCA+AGG - chr7_1:72640239-72640258 None:intergenic 30.0%
! GATTTTCCTTGTACAATCTT+TGG - chr7_1:72640370-72640389 None:intergenic 30.0%
GTACAAGGAAAATCTCTAAA+TGG + chr7_1:72640376-72640395 Msa1036280:CDS 30.0%
TAAGGAGATACAAAGTAAGT+TGG + chr7_1:72640704-72640723 Msa1036280:intron 30.0%
AGAGAAAACATACTGCATAA+GGG - chr7_1:72640866-72640885 None:intergenic 30.0%
AAATGGCAAAGGACTAAATT+GGG - chr7_1:72640889-72640908 None:intergenic 30.0%
AAAATGGCAAAGGACTAAAT+TGG - chr7_1:72640890-72640909 None:intergenic 30.0%
GAAAACATCAAAAATGGCAA+AGG - chr7_1:72640900-72640919 None:intergenic 30.0%
ATACTTGAAGCCTTAAACAA+GGG + chr7_1:72641027-72641046 Msa1036280:CDS 30.0%
ACTGGATGAAGAAATAGATA+AGG + chr7_1:72641263-72641282 Msa1036280:CDS 30.0%
GGAAAAGAAAATAGGCTTAT+TGG + chr7_1:72641323-72641342 Msa1036280:intron 30.0%
CAAATGCGGCTAAAATTTAA+AGG - chr7_1:72641669-72641688 None:intergenic 30.0%
!! AAATTTTAGCCGCATTTGAT+TGG + chr7_1:72641671-72641690 Msa1036280:intron 30.0%
TTACTTGAGGATAATTATGC+AGG + chr7_1:72641786-72641805 Msa1036280:intron 30.0%
! TAAATCTTCAAAGCTTTGTG+AGG + chr7_1:72641840-72641859 Msa1036280:CDS 30.0%
! GCATTAAATTTTGCCATTGA+AGG - chr7_1:72641919-72641938 None:intergenic 30.0%
TCAATGGCAAAATTTAATGC+AGG + chr7_1:72641919-72641938 Msa1036280:CDS 30.0%
ATGTTAAGCATATGAAACAG+TGG - chr7_1:72642108-72642127 None:intergenic 30.0%
ACAAATGAATATGCAGATGT+TGG + chr7_1:72642139-72642158 Msa1036280:intron 30.0%
!! TTTTGATTGAAATTGGAGGA+TGG + chr7_1:72642270-72642289 Msa1036280:CDS 30.0%
TCGTATAAATCGATGTAAAC+AGG - chr7_1:72642563-72642582 None:intergenic 30.0%
ATAAACACTTGTGAGATTGT+TGG + chr7_1:72642597-72642616 Msa1036280:intron 30.0%
TAAACACTTGTGAGATTGTT+GGG + chr7_1:72642598-72642617 Msa1036280:intron 30.0%
CTTGGAGAGCTTATAAAAAT+AGG - chr7_1:72642671-72642690 None:intergenic 30.0%
! TTTTATAAGCTCTCCAAGAT+TGG + chr7_1:72642673-72642692 Msa1036280:intron 30.0%
!! GTTGTTTTCATAACCAATCT+TGG - chr7_1:72642689-72642708 None:intergenic 30.0%
TTCTTTGTCGTACTTTAAGT+TGG + chr7_1:72642831-72642850 Msa1036280:intron 30.0%
! TCTTTGTCGTACTTTAAGTT+GGG + chr7_1:72642832-72642851 Msa1036280:intron 30.0%
! AATAGTTTTCTTTGTTGGTG+GGG + chr7_1:72642902-72642921 Msa1036280:intron 30.0%
! TTCCATTTTCTCTTAAGCAA+TGG + chr7_1:72642976-72642995 Msa1036280:intron 30.0%
TGTTATGGGAAAAAGAAACA+TGG + chr7_1:72643143-72643162 Msa1036280:CDS 30.0%
!! CATAAGTTTTAGTCTGTTCT+TGG - chr7_1:72643212-72643231 None:intergenic 30.0%
!!! AGCTTTTTCATTTTTGCACA+TGG + chr7_1:72643282-72643301 Msa1036280:three_prime_UTR 30.0%
TACATGTCAATATACGATAG+TGG - chr7_1:72643516-72643535 None:intergenic 30.0%
ATCGTATATTGACATGTAGA+CGG + chr7_1:72643518-72643537 Msa1036280:three_prime_UTR 30.0%
TTTCTAACATTGGCCAAACA+AGG + chr7_1:72636305-72636324 Msa1036280:five_prime_UTR 35.0%
GTTGAAACAAGACAACATCA+TGG - chr7_1:72636381-72636400 None:intergenic 35.0%
!! AGTTTGTTGTTGTTGGTTGA+AGG - chr7_1:72636467-72636486 None:intergenic 35.0%
GTGTCCATCATAACTATAAG+TGG - chr7_1:72636527-72636546 None:intergenic 35.0%
ATGGTTTCAGAAGAAACAGT+TGG - chr7_1:72636587-72636606 None:intergenic 35.0%
!! GTTTGTTTGTTTCTGAGATC+TGG + chr7_1:72636669-72636688 Msa1036280:intron 35.0%
! AACCTTTTGGATCCTTTCTT+TGG + chr7_1:72636760-72636779 Msa1036280:intron 35.0%
AATTACCCAACTCCAAAGAA+AGG - chr7_1:72636775-72636794 None:intergenic 35.0%
!! TTTCTTTGGAGTTGGGTAAT+TGG + chr7_1:72636774-72636793 Msa1036280:intron 35.0%
!! TTCTTTGGAGTTGGGTAATT+GGG + chr7_1:72636775-72636794 Msa1036280:intron 35.0%
ATTCAAGCTAGCTCATGATT+TGG - chr7_1:72636908-72636927 None:intergenic 35.0%
! ATGAGCTAGCTTGAATTTAG+TGG + chr7_1:72636912-72636931 Msa1036280:intron 35.0%
! ATCGTTTGCTAATGTATGGA+TGG + chr7_1:72636935-72636954 Msa1036280:intron 35.0%
GATGGTAAATAAATGGATGG+TGG + chr7_1:72636953-72636972 Msa1036280:intron 35.0%
GTCAATTATGGAATAGGAGT+TGG + chr7_1:72637283-72637302 Msa1036280:intron 35.0%
! TCTCAAGTTGTACATAGATG+TGG + chr7_1:72637508-72637527 Msa1036280:intron 35.0%
TGATAACAAAGAAAGAGTCC+CGG - chr7_1:72637621-72637640 None:intergenic 35.0%
GTACACACAAAAATTGGACA+AGG - chr7_1:72637780-72637799 None:intergenic 35.0%
TACAAAACTTCGTCTATCAC+AGG + chr7_1:72637832-72637851 Msa1036280:five_prime_UTR 35.0%
CAAGTTAAGTCAACTTTCAG+AGG - chr7_1:72638144-72638163 None:intergenic 35.0%
! CTCTGAAAGTTGACTTAACT+TGG + chr7_1:72638142-72638161 Msa1036280:intron 35.0%
GAGGAATTAGAAATTGCGAA+AGG + chr7_1:72638324-72638343 Msa1036280:intron 35.0%
TGTTCCGCATTTATCATTCA+TGG + chr7_1:72638477-72638496 Msa1036280:intron 35.0%
! CTCTCTCTTTCTTGTTATGA+AGG + chr7_1:72638610-72638629 Msa1036280:five_prime_UTR 35.0%
TAATAAACTCCATCCACCTT+TGG - chr7_1:72638786-72638805 None:intergenic 35.0%
CTCATTTGATCATGTCATAC+AGG + chr7_1:72638868-72638887 Msa1036280:intron 35.0%
GATCATGTCATACAGGAATA+TGG + chr7_1:72638875-72638894 Msa1036280:intron 35.0%
GTCATACAGGAATATGGATT+TGG + chr7_1:72638881-72638900 Msa1036280:intron 35.0%
CATACAGGAATATGGATTTG+GGG + chr7_1:72638883-72638902 Msa1036280:intron 35.0%
CCGTCAATTTCCAAATCTAT+AGG - chr7_1:72638913-72638932 None:intergenic 35.0%
! ACAGAAGGATTTGAAAGCAT+TGG + chr7_1:72638961-72638980 Msa1036280:five_prime_UTR 35.0%
!! CAGAAGGATTTGAAAGCATT+GGG + chr7_1:72638962-72638981 Msa1036280:five_prime_UTR 35.0%
TCAACAAAACCCACAGTATA+AGG - chr7_1:72639026-72639045 None:intergenic 35.0%
! TTCTTGTGTTTTCCTTTTGC+AGG + chr7_1:72639074-72639093 Msa1036280:intron 35.0%
AAGCACAGAACTTATTACAG+TGG - chr7_1:72639113-72639132 None:intergenic 35.0%
TATCTATAATCTGCCTGAGA+CGG + chr7_1:72639132-72639151 Msa1036280:five_prime_UTR 35.0%
TAAAACGAGCTCATTTCTGA+GGG - chr7_1:72639172-72639191 None:intergenic 35.0%
TTAAAACGAGCTCATTTCTG+AGG - chr7_1:72639173-72639192 None:intergenic 35.0%
!!! GAGCTTGCTGAAGAATTTTA+TGG + chr7_1:72639276-72639295 Msa1036280:five_prime_UTR 35.0%
ATTAGATGAACGAGGATCTA+AGG - chr7_1:72639503-72639522 None:intergenic 35.0%
! AACTTTATGAGCATTGCATG+AGG - chr7_1:72639674-72639693 None:intergenic 35.0%
TTTGGTCACTGCTGAATAAT+TGG + chr7_1:72639696-72639715 Msa1036280:intron 35.0%
TTGGTCACTGCTGAATAATT+GGG + chr7_1:72639697-72639716 Msa1036280:intron 35.0%
ATCCAATAGAGTTGACATGA+TGG - chr7_1:72639748-72639767 None:intergenic 35.0%
TTTCCTTAATATCCTGCAGA+AGG + chr7_1:72639776-72639795 Msa1036280:intron 35.0%
TTCCTTAATATCCTGCAGAA+GGG + chr7_1:72639777-72639796 Msa1036280:intron 35.0%
TGATATGGTATAGTCTCTTC+TGG + chr7_1:72639954-72639973 Msa1036280:intron 35.0%
ACCATCAGATCAATCAAATC+CGG + chr7_1:72640045-72640064 Msa1036280:intron 35.0%
ACATACTTGTGGTAAGCTAA+AGG - chr7_1:72640105-72640124 None:intergenic 35.0%
ATCCATCATACGTGAAGAAA+AGG + chr7_1:72640308-72640327 Msa1036280:CDS 35.0%
TCCATCATACGTGAAGAAAA+GGG + chr7_1:72640309-72640328 Msa1036280:CDS 35.0%
TTCCTTGTACAATCTTTGGA+CGG - chr7_1:72640366-72640385 None:intergenic 35.0%
AACAACAGATACCACTAACA+TGG - chr7_1:72640519-72640538 None:intergenic 35.0%
GGGAGATAACTCTCTTAATT+TGG - chr7_1:72640770-72640789 None:intergenic 35.0%
!! TTTTGTTTGATTGAGAGGGA+GGG - chr7_1:72640796-72640815 None:intergenic 35.0%
!! ATTTTGTTTGATTGAGAGGG+AGG - chr7_1:72640797-72640816 None:intergenic 35.0%
GAGAGAAAACATACTGCATA+AGG - chr7_1:72640867-72640886 None:intergenic 35.0%
CCATCGGAAAACATCAAAAA+TGG - chr7_1:72640906-72640925 None:intergenic 35.0%
!! CCATTTTTGATGTTTTCCGA+TGG + chr7_1:72640903-72640922 Msa1036280:intron 35.0%
GATACTTGAAGCCTTAAACA+AGG + chr7_1:72641026-72641045 Msa1036280:intron 35.0%
! TCTTGTGGAGATTTTCAACA+AGG + chr7_1:72641071-72641090 Msa1036280:CDS 35.0%
! GTTATAGTATAATGGGAGCT+TGG + chr7_1:72641302-72641321 Msa1036280:intron 35.0%
GTGATTCATAAGTCCTTCAT+AGG - chr7_1:72641557-72641576 None:intergenic 35.0%
GCTCTATTTGATCTTGGAAT+TGG + chr7_1:72641718-72641737 Msa1036280:intron 35.0%
! ACTTTTGAGCATGATTGTGT+TGG + chr7_1:72641961-72641980 Msa1036280:CDS 35.0%
TATGAAACAGTGGCAAATCA+AGG - chr7_1:72642098-72642117 None:intergenic 35.0%
! TTATAAAGGAGTACAACCAC+AGG + chr7_1:72642180-72642199 Msa1036280:CDS 35.0%
CACTTTACTACAATCCAGTT+TGG + chr7_1:72642345-72642364 Msa1036280:CDS 35.0%
GCAACTATAAAATGCCAAAC+TGG - chr7_1:72642362-72642381 None:intergenic 35.0%
! GCATTTTATAGTTGCATCGT+GGG + chr7_1:72642367-72642386 Msa1036280:CDS 35.0%
TTACTTACCTGTCAAGATCA+AGG - chr7_1:72642415-72642434 None:intergenic 35.0%
! GCTAGATAAGTTAAGTTGTG+TGG + chr7_1:72642520-72642539 Msa1036280:intron 35.0%
AGATTGTTGGGAAAAGCTTA+TGG + chr7_1:72642610-72642629 Msa1036280:intron 35.0%
CTTAAGAGAAAATGGAATGC+AGG - chr7_1:72642973-72642992 None:intergenic 35.0%
! ATTCTATATTGGCGGTGTTA+TGG + chr7_1:72643128-72643147 Msa1036280:CDS 35.0%
!! TTCTATATTGGCGGTGTTAT+GGG + chr7_1:72643129-72643148 Msa1036280:CDS 35.0%
GGAAAAAGAAACATGGATCA+CGG + chr7_1:72643150-72643169 Msa1036280:CDS 35.0%
TATCGGAGTGATGAACAAAA+TGG - chr7_1:72643250-72643269 None:intergenic 35.0%
GTAAAATCAACATGATACCG+TGG - chr7_1:72643417-72643436 None:intergenic 35.0%
TCGTATATTGACATGTAGAC+GGG + chr7_1:72643519-72643538 Msa1036280:three_prime_UTR 35.0%
! GAGTCTTCATTTGTTCTAAG+AGG + chr7_1:72643595-72643614 Msa1036280:three_prime_UTR 35.0%
!! TCTTCATTTGTTCTAAGAGG+AGG + chr7_1:72643598-72643617 Msa1036280:three_prime_UTR 35.0%
!! CTTCATTTGTTCTAAGAGGA+GGG + chr7_1:72643599-72643618 Msa1036280:three_prime_UTR 35.0%
AAACAAGGTTTACCTTCGCA+CGG + chr7_1:72636320-72636339 Msa1036280:five_prime_UTR 40.0%
CTCCAAAGAAAGGATCCAAA+AGG - chr7_1:72636765-72636784 None:intergenic 40.0%
!! TTGGATCCTTTCTTTGGAGT+TGG + chr7_1:72636766-72636785 Msa1036280:intron 40.0%
!! TGGATCCTTTCTTTGGAGTT+GGG + chr7_1:72636767-72636786 Msa1036280:intron 40.0%
!! TCTTTGGAGTTGGGTAATTG+GGG + chr7_1:72636776-72636795 Msa1036280:intron 40.0%
ACCATCTCGTGAGACAAAAT+GGG - chr7_1:72636820-72636839 None:intergenic 40.0%
AACCATCTCGTGAGACAAAA+TGG - chr7_1:72636821-72636840 None:intergenic 40.0%
! GTGGATCGTTTGCTAATGTA+TGG + chr7_1:72636931-72636950 Msa1036280:intron 40.0%
TTAGTGTATGTTTGGATCGG+CGG + chr7_1:72637052-72637071 Msa1036280:intron 40.0%
TCACAACACCACCAAACATA+CGG + chr7_1:72637129-72637148 Msa1036280:intron 40.0%
GTGTTTAACCGTATGTTTGG+TGG - chr7_1:72637140-72637159 None:intergenic 40.0%
!!! TAGGCTTTTTAGTTGCCATC+TGG + chr7_1:72637161-72637180 Msa1036280:intron 40.0%
GGTTTCATGTACAAGAGTTG+CGG + chr7_1:72637338-72637357 Msa1036280:intron 40.0%
! CCAATTCAATAATTTGGGGC+CGG + chr7_1:72637599-72637618 Msa1036280:intron 40.0%
! CAATTCAATAATTTGGGGCC+GGG + chr7_1:72637600-72637619 Msa1036280:intron 40.0%
TTGGTCATACAATACCCAAG+AGG - chr7_1:72637724-72637743 None:intergenic 40.0%
!! AGTTTTGTATGACCAGGATC+AGG - chr7_1:72637821-72637840 None:intergenic 40.0%
!! AGACGAAGTTTTGTATGACC+AGG - chr7_1:72637827-72637846 None:intergenic 40.0%
AAACTTCGTCTATCACAGGA+AGG + chr7_1:72637836-72637855 Msa1036280:five_prime_UTR 40.0%
CTAACGAGGATCATCAACAT+TGG - chr7_1:72638365-72638384 None:intergenic 40.0%
!!! TGTTTTCTTAGGGTTTGGTG+TGG + chr7_1:72638739-72638758 Msa1036280:intron 40.0%
!!! GTTTTCTTAGGGTTTGGTGT+GGG + chr7_1:72638740-72638759 Msa1036280:intron 40.0%
!!! TTTTCTTAGGGTTTGGTGTG+GGG + chr7_1:72638741-72638760 Msa1036280:intron 40.0%
TTGGGGAACACCTATAGATT+TGG + chr7_1:72638900-72638919 Msa1036280:five_prime_UTR 40.0%
CAAAACCCACAGTATAAGGT+CGG - chr7_1:72639022-72639041 None:intergenic 40.0%
CAGAGCAAATATCCTGCAAA+AGG - chr7_1:72639089-72639108 None:intergenic 40.0%
! CTTTTGCAGGATATTTGCTC+TGG + chr7_1:72639087-72639106 Msa1036280:intron 40.0%
TTATGATGACTAACCGTCTC+AGG - chr7_1:72639148-72639167 None:intergenic 40.0%
AAAACGAGCTCATTTCTGAG+GGG - chr7_1:72639171-72639190 None:intergenic 40.0%
! CATCTCTAGACTCTCTTTTG+CGG + chr7_1:72639251-72639270 Msa1036280:five_prime_UTR 40.0%
CTTCACTCTATTCCAACACA+CGG - chr7_1:72639468-72639487 None:intergenic 40.0%
ACTTACGCAGAAAATCTCGT+TGG - chr7_1:72639633-72639652 None:intergenic 40.0%
!! AGAGTTGACATGATGGACAA+GGG - chr7_1:72639741-72639760 None:intergenic 40.0%
!! TAGAGTTGACATGATGGACA+AGG - chr7_1:72639742-72639761 None:intergenic 40.0%
GTCCATCATGTCAACTCTAT+TGG + chr7_1:72639743-72639762 Msa1036280:intron 40.0%
TTCCCTTCTGCAGGATATTA+AGG - chr7_1:72639782-72639801 None:intergenic 40.0%
AGGGAAATCAGTGCAACAAA+TGG + chr7_1:72639796-72639815 Msa1036280:exon 40.0%
GAAATCAGTGCAACAAATGG+TGG + chr7_1:72639799-72639818 Msa1036280:exon 40.0%
CCATCAGATCAATCAAATCC+GGG + chr7_1:72640046-72640065 Msa1036280:intron 40.0%
CAATCAAATCCGGGATTCAT+TGG + chr7_1:72640055-72640074 Msa1036280:CDS 40.0%
CCATAATAGCCAATGAATCC+CGG - chr7_1:72640067-72640086 None:intergenic 40.0%
! CGGGATTCATTGGCTATTAT+GGG + chr7_1:72640065-72640084 Msa1036280:CDS 40.0%
ATGAGGAAGACACATACTTG+TGG - chr7_1:72640116-72640135 None:intergenic 40.0%
TTTCCATTTCAACCCTAACG+TGG + chr7_1:72640159-72640178 Msa1036280:intron 40.0%
ATTCCACGTTAGGGTTGAAA+TGG - chr7_1:72640165-72640184 None:intergenic 40.0%
GACAAAGCTCTGTGATTTGA+AGG + chr7_1:72640273-72640292 Msa1036280:CDS 40.0%
AAGCTCTGTGATTTGAAGGA+TGG + chr7_1:72640277-72640296 Msa1036280:CDS 40.0%
AGCTCTGTGATTTGAAGGAT+GGG + chr7_1:72640278-72640297 Msa1036280:CDS 40.0%
! TCCCTTTTCTTCACGTATGA+TGG - chr7_1:72640313-72640332 None:intergenic 40.0%
ATCCGTCCAAAGATTGTACA+AGG + chr7_1:72640361-72640380 Msa1036280:CDS 40.0%
AAAAACCAAGTACCTGCTTC+AGG - chr7_1:72640420-72640439 None:intergenic 40.0%
TATGGAACCTCTCCAACATT+GGG + chr7_1:72640592-72640611 Msa1036280:intron 40.0%
TCCAACATTGGGAGATTTGT+AGG + chr7_1:72640603-72640622 Msa1036280:intron 40.0%
CCAACATTGGGAGATTTGTA+GGG + chr7_1:72640604-72640623 Msa1036280:intron 40.0%
CAACATTGGGAGATTTGTAG+GGG + chr7_1:72640605-72640624 Msa1036280:intron 40.0%
AACATTGGGAGATTTGTAGG+GGG + chr7_1:72640606-72640625 Msa1036280:intron 40.0%
! AATTTGGTTCACAGAGCGAA+GGG - chr7_1:72640754-72640773 None:intergenic 40.0%
! TAATTTGGTTCACAGAGCGA+AGG - chr7_1:72640755-72640774 None:intergenic 40.0%
TTTGTTTGATTGAGAGGGAG+GGG - chr7_1:72640795-72640814 None:intergenic 40.0%
! TAAGGGTCTGTTTGGTTCAA+AGG - chr7_1:72640849-72640868 None:intergenic 40.0%
ATACTGCATAAGGGTCTGTT+TGG - chr7_1:72640857-72640876 None:intergenic 40.0%
! TGGAATCTCTCCCTTGTTTA+AGG - chr7_1:72641040-72641059 None:intergenic 40.0%
! TGAAGATATCCTTCTGGAAG+AGG - chr7_1:72641153-72641172 None:intergenic 40.0%
GAAGCTTGAAGATATCCTTC+TGG - chr7_1:72641159-72641178 None:intergenic 40.0%
! GCATTCGATCAGCAACATTT+TGG + chr7_1:72641210-72641229 Msa1036280:CDS 40.0%
TAAGAAGTCAGTCACACAAC+TGG + chr7_1:72641245-72641264 Msa1036280:CDS 40.0%
GGGAGCTTGGAAAAGAAAAT+AGG + chr7_1:72641315-72641334 Msa1036280:intron 40.0%
AAGACACTAGCAACAAACAC+AGG - chr7_1:72641487-72641506 None:intergenic 40.0%
CAGTCTGCTCTATTTGATCT+TGG + chr7_1:72641712-72641731 Msa1036280:intron 40.0%
AGTTCTCAAGCTTCCTTCAA+TGG + chr7_1:72641903-72641922 Msa1036280:CDS 40.0%
ACCTTCAAAAGCAAACTACG+AGG + chr7_1:72641984-72642003 Msa1036280:CDS 40.0%
CCTTCAAAAGCAAACTACGA+GGG + chr7_1:72641985-72642004 Msa1036280:CDS 40.0%
CAGTGGCAAATCAAGGAAAA+TGG - chr7_1:72642091-72642110 None:intergenic 40.0%
! ACAACCACAGGCTTTTCAAT+TGG + chr7_1:72642192-72642211 Msa1036280:CDS 40.0%
!! TATTTCTGGAGACCTACACA+AGG + chr7_1:72642303-72642322 Msa1036280:CDS 40.0%
! AGACCTACACAAGGTTGTTT+TGG + chr7_1:72642312-72642331 Msa1036280:CDS 40.0%
TGACCAAAACAACCTTGTGT+AGG - chr7_1:72642318-72642337 None:intergenic 40.0%
! GGCATTTTATAGTTGCATCG+TGG + chr7_1:72642366-72642385 Msa1036280:CDS 40.0%
TGTGTGGTTTCATGACTCTT+AGG + chr7_1:72642536-72642555 Msa1036280:intron 40.0%
GTGTGGTTTCATGACTCTTA+GGG + chr7_1:72642537-72642556 Msa1036280:intron 40.0%
GAGAAAATGGAATGCAGGTA+GGG - chr7_1:72642968-72642987 None:intergenic 40.0%
AGAGAAAATGGAATGCAGGT+AGG - chr7_1:72642969-72642988 None:intergenic 40.0%
GGCCATTGCTTAAGAGAAAA+TGG - chr7_1:72642981-72643000 None:intergenic 40.0%
! CTCTAAAAGATAGCCAACAG+TGG - chr7_1:72643002-72643021 None:intergenic 40.0%
AAAAGAAACATGGATCACGG+TGG + chr7_1:72643153-72643172 Msa1036280:CDS 40.0%
TCATCACTCCGATATTCCTT+TGG + chr7_1:72643256-72643275 Msa1036280:three_prime_UTR 40.0%
CATCACTCCGATATTCCTTT+GGG + chr7_1:72643257-72643276 Msa1036280:three_prime_UTR 40.0%
AAATGAAAAAGCTCGCCCAA+AGG - chr7_1:72643275-72643294 None:intergenic 40.0%
TGCTTGCAACAAAACTAGGT+AGG - chr7_1:72643324-72643343 None:intergenic 40.0%
TGTGTGCTTGCAACAAAACT+AGG - chr7_1:72643328-72643347 None:intergenic 40.0%
! CAAGCACACAAAGTGTCAAA+TGG + chr7_1:72643338-72643357 Msa1036280:three_prime_UTR 40.0%
AAGTGTCAAATGGTGATCAG+AGG + chr7_1:72643348-72643367 Msa1036280:three_prime_UTR 40.0%
AGTGTCAAATGGTGATCAGA+GGG + chr7_1:72643349-72643368 Msa1036280:three_prime_UTR 40.0%
GTGCGAAGGTAAACCTTGTT+TGG - chr7_1:72636321-72636340 None:intergenic 45.0%
!! GGAACGGAGTTTGTTGTTGT+TGG - chr7_1:72636474-72636493 None:intergenic 45.0%
! ACCCATTTTGTCTCACGAGA+TGG + chr7_1:72636816-72636835 Msa1036280:intron 45.0%
! AGCTTTTGCCTCAGTGATTC+TGG - chr7_1:72637087-72637106 None:intergenic 45.0%
CCGGCCCCAAATTATTGAAT+TGG - chr7_1:72637602-72637621 None:intergenic 45.0%
AACAAACCCCATTGCATCTG+TGG + chr7_1:72637880-72637899 Msa1036280:five_prime_UTR 45.0%
TTACTGCCACAGATGCAATG+GGG - chr7_1:72637889-72637908 None:intergenic 45.0%
CTTACTGCCACAGATGCAAT+GGG - chr7_1:72637890-72637909 None:intergenic 45.0%
ACTTACTGCCACAGATGCAA+TGG - chr7_1:72637891-72637910 None:intergenic 45.0%
GCAAAAAAGACTTTCCGGAG+CGG - chr7_1:72638579-72638598 None:intergenic 45.0%
ATGCGTGACACGAAAACCAA+AGG + chr7_1:72638767-72638786 Msa1036280:five_prime_UTR 45.0%
ACACGAAAACCAAAGGTGGA+TGG + chr7_1:72638774-72638793 Msa1036280:intron 45.0%
CGTGTGTTGGAATAGAGTGA+AGG + chr7_1:72639466-72639485 Msa1036280:five_prime_UTR 45.0%
CAGGTTCAAATGCAACATCC+TGG - chr7_1:72639591-72639610 None:intergenic 45.0%
TTGGATAAGCCACAAGAGCT+TGG - chr7_1:72639614-72639633 None:intergenic 45.0%
CCCGGATTTGATTGATCTGA+TGG - chr7_1:72640049-72640068 None:intergenic 45.0%
! CCGGGATTCATTGGCTATTA+TGG + chr7_1:72640064-72640083 Msa1036280:CDS 45.0%
GCTCTGTGATTTGAAGGATG+GGG + chr7_1:72640279-72640298 Msa1036280:CDS 45.0%
GTTTGTTTCCTTCCTGAAGC+AGG + chr7_1:72640405-72640424 Msa1036280:CDS 45.0%
ATGTTGGAGAGGTTCCATAG+AGG - chr7_1:72640591-72640610 None:intergenic 45.0%
CTATGGAACCTCTCCAACAT+TGG + chr7_1:72640591-72640610 Msa1036280:intron 45.0%
CAAATCTCCCAATGTTGGAG+AGG - chr7_1:72640602-72640621 None:intergenic 45.0%
CCCTACAAATCTCCCAATGT+TGG - chr7_1:72640607-72640626 None:intergenic 45.0%
ACATTGGGAGATTTGTAGGG+GGG + chr7_1:72640607-72640626 Msa1036280:intron 45.0%
TGGTTCAAAGGAGGGGAAAA+GGG - chr7_1:72640837-72640856 None:intergenic 45.0%
TTGGTTCAAAGGAGGGGAAA+AGG - chr7_1:72640838-72640857 None:intergenic 45.0%
! GTCTGTTTGGTTCAAAGGAG+GGG - chr7_1:72640844-72640863 None:intergenic 45.0%
! GGTCTGTTTGGTTCAAAGGA+GGG - chr7_1:72640845-72640864 None:intergenic 45.0%
AAGGGAGAGATTCCATCAAC+AGG + chr7_1:72641045-72641064 Msa1036280:CDS 45.0%
TCCATCAACAGGTTCTCTTG+TGG + chr7_1:72641056-72641075 Msa1036280:CDS 45.0%
TCCACAAGAGAACCTGTTGA+TGG - chr7_1:72641060-72641079 None:intergenic 45.0%
CAGTGAAAAGATGGCCACAT+TGG + chr7_1:72641122-72641141 Msa1036280:CDS 45.0%
TCTTCAAGCTTCCCATGACA+TGG + chr7_1:72641167-72641186 Msa1036280:CDS 45.0%
TTGCTGATCGAATGCTTGCA+TGG - chr7_1:72641205-72641224 None:intergenic 45.0%
CTGACTTCTTAGCATGGTGA+CGG - chr7_1:72641236-72641255 None:intergenic 45.0%
! GTGTGACTGACTTCTTAGCA+TGG - chr7_1:72641242-72641261 None:intergenic 45.0%
TTGTTGCTAGTGTCTTGCGT+AGG + chr7_1:72641491-72641510 Msa1036280:intron 45.0%
TGTTGCTAGTGTCTTGCGTA+GGG + chr7_1:72641492-72641511 Msa1036280:intron 45.0%
GAAGCTTGAGAACTTGAAGC+TGG - chr7_1:72641897-72641916 None:intergenic 45.0%
!!! CCCTCGTAGTTTGCTTTTGA+AGG - chr7_1:72641988-72642007 None:intergenic 45.0%
CCAACCAATTGAAAAGCCTG+TGG - chr7_1:72642199-72642218 None:intergenic 45.0%
! CCACAGGCTTTTCAATTGGT+TGG + chr7_1:72642196-72642215 Msa1036280:CDS 45.0%
! CAGGCTTTTCAATTGGTTGG+TGG + chr7_1:72642199-72642218 Msa1036280:CDS 45.0%
ACCTGTCAAGATCAAGGACT+GGG - chr7_1:72642409-72642428 None:intergenic 45.0%
TACCTGTCAAGATCAAGGAC+TGG - chr7_1:72642410-72642429 None:intergenic 45.0%
! GGGACTAAATCCCTTGCTAT+AGG - chr7_1:72642928-72642947 None:intergenic 45.0%
! TAGGGTCGGCTCAAGTATAA+GGG - chr7_1:72642950-72642969 None:intergenic 45.0%
AAATGGAATGCAGGTAGGGT+CGG - chr7_1:72642964-72642983 None:intergenic 45.0%
TCTTAAGCAATGGCCACTGT+TGG + chr7_1:72642986-72643005 Msa1036280:intron 45.0%
AAGCTCGCCCAAAGGAATAT+CGG - chr7_1:72643267-72643286 None:intergenic 45.0%
AAAACTAGGTAGGTGCATGC+AGG - chr7_1:72643314-72643333 None:intergenic 45.0%
GAGACTTGCCAGAATCACTG+AGG + chr7_1:72637076-72637095 Msa1036280:intron 50.0%
CCAGGATCAGGTTCGACAAT+GGG - chr7_1:72637809-72637828 None:intergenic 50.0%
ACCAGGATCAGGTTCGACAA+TGG - chr7_1:72637810-72637829 None:intergenic 50.0%
TCGTCTATCACAGGAAGGCT+TGG + chr7_1:72637841-72637860 Msa1036280:five_prime_UTR 50.0%
GTAATTGGACCTTACCGCTC+CGG + chr7_1:72638562-72638581 Msa1036280:five_prime_UTR 50.0%
AAAGACTTTCCGGAGCGGTA+AGG - chr7_1:72638574-72638593 None:intergenic 50.0%
CGTGACACGAAAACCAAAGG+TGG + chr7_1:72638770-72638789 Msa1036280:intron 50.0%
! TGTGCACCGACCTTATACTG+TGG + chr7_1:72639013-72639032 Msa1036280:intron 50.0%
! GTGCACCGACCTTATACTGT+GGG + chr7_1:72639014-72639033 Msa1036280:intron 50.0%
CACTTGCAATCTCCGTGTGT+TGG + chr7_1:72639453-72639472 Msa1036280:five_prime_UTR 50.0%
! GAACGAGGATCTAAGGCATG+TGG - chr7_1:72639496-72639515 None:intergenic 50.0%
!!! TTGCTGGCTTTTATAGGGCC+AGG + chr7_1:72639570-72639589 Msa1036280:intron 50.0%
TTGAACCTGCCAAGCTCTTG+TGG + chr7_1:72639602-72639621 Msa1036280:five_prime_UTR 50.0%
ATAAGCCACAAGAGCTTGGC+AGG - chr7_1:72639610-72639629 None:intergenic 50.0%
!! TGCACTGATTTCCCTTCTGC+AGG - chr7_1:72639791-72639810 None:intergenic 50.0%
TCAAACAGCCACATCTCCAG+CGG + chr7_1:72640251-72640270 Msa1036280:intron 50.0%
! AATCACAGAGCTTTGTCCGC+TGG - chr7_1:72640270-72640289 None:intergenic 50.0%
TCCTTCCTGAAGCAGGTACT+TGG + chr7_1:72640412-72640431 Msa1036280:intron 50.0%
ACCAAGTACCTGCTTCAGGA+AGG - chr7_1:72640416-72640435 None:intergenic 50.0%
TTCCATAGAGGTCAAGGTGG+GGG - chr7_1:72640579-72640598 None:intergenic 50.0%
GTTCCATAGAGGTCAAGGTG+GGG - chr7_1:72640580-72640599 None:intergenic 50.0%
GGTTCCATAGAGGTCAAGGT+GGG - chr7_1:72640581-72640600 None:intergenic 50.0%
AGGTTCCATAGAGGTCAAGG+TGG - chr7_1:72640582-72640601 None:intergenic 50.0%
GAGAGGTTCCATAGAGGTCA+AGG - chr7_1:72640585-72640604 None:intergenic 50.0%
TTGATTGAGAGGGAGGGGAT+GGG - chr7_1:72640790-72640809 None:intergenic 50.0%
TTTGATTGAGAGGGAGGGGA+TGG - chr7_1:72640791-72640810 None:intergenic 50.0%
TCAAAGGAGGGGAAAAGGGA+AGG - chr7_1:72640833-72640852 None:intergenic 50.0%
! GGGTCTGTTTGGTTCAAAGG+AGG - chr7_1:72640846-72640865 None:intergenic 50.0%
TGGAAGAGGTAGAGCCAATG+TGG - chr7_1:72641139-72641158 None:intergenic 50.0%
!! TTGGCTCTACCTCTTCCAGA+AGG + chr7_1:72641141-72641160 Msa1036280:CDS 50.0%
GTCACCTCTAGCCATGTCAT+GGG - chr7_1:72641181-72641200 None:intergenic 50.0%
GTGAGATGCTCGACCTATGA+AGG + chr7_1:72641541-72641560 Msa1036280:intron 50.0%
GTCCATCATGTCCTCGCAAT+CGG - chr7_1:72641875-72641894 None:intergenic 50.0%
AGCAAACTACGAGGGACGTA+TGG + chr7_1:72641993-72642012 Msa1036280:CDS 50.0%
! AGGGTCGGCTCAAGTATAAG+GGG - chr7_1:72642949-72642968 None:intergenic 50.0%
! GTAGGGTCGGCTCAAGTATA+AGG - chr7_1:72642951-72642970 None:intergenic 50.0%
GGTTTACCTTCGCACGGACA+AGG + chr7_1:72636326-72636345 Msa1036280:five_prime_UTR 55.0%
TTCGATCCTTGTCCGTGCGA+AGG - chr7_1:72636335-72636354 None:intergenic 55.0%
CCCATTGTCGAACCTGATCC+TGG + chr7_1:72637806-72637825 Msa1036280:five_prime_UTR 55.0%
! AGCTTTGTCCGCTGGAGATG+TGG - chr7_1:72640262-72640281 None:intergenic 55.0%
ATCCCCCACCTTGACCTCTA+TGG + chr7_1:72640574-72640593 Msa1036280:intron 55.0%
GCTTCCCATGACATGGCTAG+AGG + chr7_1:72641174-72641193 Msa1036280:CDS 55.0%
CGTCACCTCTAGCCATGTCA+TGG - chr7_1:72641182-72641201 None:intergenic 55.0%
! CACCGATTGCGAGGACATGA+TGG + chr7_1:72641870-72641889 Msa1036280:CDS 55.0%
CTACGAGGGACGTATGGCAA+AGG + chr7_1:72641999-72642018 Msa1036280:CDS 55.0%
AGGGACGTATGGCAAAGGTC+TGG + chr7_1:72642004-72642023 Msa1036280:intron 55.0%
TTTCTCCCTCGTCACGGTTG+TGG + chr7_1:72642223-72642242 Msa1036280:CDS 55.0%
GCCCAGTCCTTGATCTTGAC+AGG + chr7_1:72642405-72642424 Msa1036280:CDS 55.0%
! TGTTGGTGGGGCCTATAGCA+AGG + chr7_1:72642914-72642933 Msa1036280:intron 55.0%
! GTTGGTGGGGCCTATAGCAA+GGG + chr7_1:72642915-72642934 Msa1036280:intron 55.0%
! GGGTCGGCTCAAGTATAAGG+GGG - chr7_1:72642948-72642967 None:intergenic 55.0%
!! TGCAGATGGGCTATCCCACT+TGG + chr7_1:72643086-72643105 Msa1036280:intron 55.0%
CATCTCCCACACAGCTTCTG+TGG + chr7_1:72643377-72643396 Msa1036280:three_prime_UTR 55.0%
TCACGCCACAGAAGCTGTGT+GGG - chr7_1:72643385-72643404 None:intergenic 55.0%
ATCACGCCACAGAAGCTGTG+TGG - chr7_1:72643386-72643405 None:intergenic 55.0%
TGGCGTGATCTCTGTAGCCA+CGG + chr7_1:72643397-72643416 Msa1036280:three_prime_UTR 55.0%
! GGCACTGTACACCGATTGCG+AGG + chr7_1:72641861-72641880 Msa1036280:CDS 60.0%
GGTGGCTTTCTCCCTCGTCA+CGG + chr7_1:72642217-72642236 Msa1036280:CDS 60.0%
TCCCTCGTCACGGTTGTGGT+TGG + chr7_1:72642227-72642246 Msa1036280:CDS 60.0%
GCCAACCACAACCGTGACGA+GGG - chr7_1:72642231-72642250 None:intergenic 60.0%
TCGTCACGGTTGTGGTTGGC+CGG + chr7_1:72642231-72642250 Msa1036280:CDS 60.0%
GGCCAACCACAACCGTGACG+AGG - chr7_1:72642232-72642251 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 72636293 72643678 72636293 ID=Msa1036280;Name=Msa1036280
chr7_1 mRNA 72636293 72643678 72636293 ID=Msa1036280-mRNA-1;Parent=Msa1036280;Name=Msa1036280-mRNA-1;_AED=0.14;_eAED=0.14;_QI=1052|1|1|1|0.93|0.87|16|455|389
chr7_1 exon 72636293 72636624 72636293 ID=Msa1036280-mRNA-1:exon:17707;Parent=Msa1036280-mRNA-1
chr7_1 exon 72637802 72637904 72637802 ID=Msa1036280-mRNA-1:exon:17708;Parent=Msa1036280-mRNA-1
chr7_1 exon 72638562 72638631 72638562 ID=Msa1036280-mRNA-1:exon:17709;Parent=Msa1036280-mRNA-1
chr7_1 exon 72638750 72638788 72638750 ID=Msa1036280-mRNA-1:exon:17710;Parent=Msa1036280-mRNA-1
chr7_1 exon 72638890 72639007 72638890 ID=Msa1036280-mRNA-1:exon:17711;Parent=Msa1036280-mRNA-1
chr7_1 exon 72639096 72639153 72639096 ID=Msa1036280-mRNA-1:exon:17712;Parent=Msa1036280-mRNA-1
chr7_1 exon 72639237 72639487 72639237 ID=Msa1036280-mRNA-1:exon:17713;Parent=Msa1036280-mRNA-1
chr7_1 exon 72639586 72639646 72639586 ID=Msa1036280-mRNA-1:exon:17714;Parent=Msa1036280-mRNA-1
chr7_1 exon 72639795 72639854 72639795 ID=Msa1036280-mRNA-1:exon:17715;Parent=Msa1036280-mRNA-1
chr7_1 exon 72639941 72639960 72639941 ID=Msa1036280-mRNA-1:exon:17716;Parent=Msa1036280-mRNA-1
chr7_1 exon 72640053 72640118 72640053 ID=Msa1036280-mRNA-1:exon:17717;Parent=Msa1036280-mRNA-1
chr7_1 exon 72640259 72640426 72640259 ID=Msa1036280-mRNA-1:exon:17718;Parent=Msa1036280-mRNA-1
chr7_1 exon 72641027 72641284 72641027 ID=Msa1036280-mRNA-1:exon:17719;Parent=Msa1036280-mRNA-1
chr7_1 exon 72641808 72642020 72641808 ID=Msa1036280-mRNA-1:exon:17720;Parent=Msa1036280-mRNA-1
chr7_1 exon 72642155 72642426 72642155 ID=Msa1036280-mRNA-1:exon:17721;Parent=Msa1036280-mRNA-1
chr7_1 exon 72643091 72643678 72643091 ID=Msa1036280-mRNA-1:exon:17722;Parent=Msa1036280-mRNA-1
chr7_1 five_prime_UTR 72636293 72636624 72636293 ID=Msa1036280-mRNA-1:five_prime_utr;Parent=Msa1036280-mRNA-1
chr7_1 five_prime_UTR 72637802 72637904 72637802 ID=Msa1036280-mRNA-1:five_prime_utr;Parent=Msa1036280-mRNA-1
chr7_1 five_prime_UTR 72638562 72638631 72638562 ID=Msa1036280-mRNA-1:five_prime_utr;Parent=Msa1036280-mRNA-1
chr7_1 five_prime_UTR 72638750 72638788 72638750 ID=Msa1036280-mRNA-1:five_prime_utr;Parent=Msa1036280-mRNA-1
chr7_1 five_prime_UTR 72638890 72639007 72638890 ID=Msa1036280-mRNA-1:five_prime_utr;Parent=Msa1036280-mRNA-1
chr7_1 five_prime_UTR 72639096 72639153 72639096 ID=Msa1036280-mRNA-1:five_prime_utr;Parent=Msa1036280-mRNA-1
chr7_1 five_prime_UTR 72639237 72639487 72639237 ID=Msa1036280-mRNA-1:five_prime_utr;Parent=Msa1036280-mRNA-1
chr7_1 five_prime_UTR 72639586 72639646 72639586 ID=Msa1036280-mRNA-1:five_prime_utr;Parent=Msa1036280-mRNA-1
chr7_1 five_prime_UTR 72639795 72639814 72639795 ID=Msa1036280-mRNA-1:five_prime_utr;Parent=Msa1036280-mRNA-1
chr7_1 CDS 72639815 72639854 72639815 ID=Msa1036280-mRNA-1:cds;Parent=Msa1036280-mRNA-1
chr7_1 CDS 72639941 72639960 72639941 ID=Msa1036280-mRNA-1:cds;Parent=Msa1036280-mRNA-1
chr7_1 CDS 72640053 72640118 72640053 ID=Msa1036280-mRNA-1:cds;Parent=Msa1036280-mRNA-1
chr7_1 CDS 72640259 72640426 72640259 ID=Msa1036280-mRNA-1:cds;Parent=Msa1036280-mRNA-1
chr7_1 CDS 72641027 72641284 72641027 ID=Msa1036280-mRNA-1:cds;Parent=Msa1036280-mRNA-1
chr7_1 CDS 72641808 72642020 72641808 ID=Msa1036280-mRNA-1:cds;Parent=Msa1036280-mRNA-1
chr7_1 CDS 72642155 72642426 72642155 ID=Msa1036280-mRNA-1:cds;Parent=Msa1036280-mRNA-1
chr7_1 CDS 72643091 72643223 72643091 ID=Msa1036280-mRNA-1:cds;Parent=Msa1036280-mRNA-1
chr7_1 three_prime_UTR 72643224 72643678 72643224 ID=Msa1036280-mRNA-1:three_prime_utr;Parent=Msa1036280-mRNA-1
Gene Sequence

>Msa1036280

ATGGTGGATGAAGCTCTTCGACAAGTCCCTAATAAAGATAGAGACAGAAATATTGATATGATCAATCAAATCCGGGATTCATTGGCTATTATGGGTGACAATAGTACTGCCTTTAGCTTACCACAACCACATCTCCAGCGGACAAAGCTCTGTGATTTGAAGGATGGGGAGCTCGATCCATCATACGTGAAGAAAAGGGAGAAGCTAAAAGAGCTTGTTTCTAGTATAATCCGTCCAAAGATTGTACAAGGAAAATCTCTAAATGGGAAAGAGTTTGTTTCCTTCCTGAAGCAGATACTTGAAGCCTTAAACAAGGGAGAGATTCCATCAACAGGTTCTCTTGTGGAGATTTTCAACAAGGACATTCTTGAAAGATGTCTTAAGTTATACAGTGAAAAGATGGCCACATTGGCTCTACCTCTTCCAGAAGGATATCTTCAAGCTTCCCATGACATGGCTAGAGGTGACGCCATGCAAGCATTCGATCAGCAACATTTTGGCCGTCACCATGCTAAGAAGTCAGTCACACAACTGGATGAAGAAATAGATAAGGTATTTAAGAATGTCATTTTACAAAATGAATATAAATCTTCAAAGCTTTGTGAGGCACTGTACACCGATTGCGAGGACATGATGGACCAGCTTCAAGTTCTCAAGCTTCCTTCAATGGCAAAATTTAATGCAGGTCTCGAGAAATGCAATCGTACTTTTGAGCATGATTGTGTTGGACCTTCAAAAGCAAACTACGAGGGACGTATGGCAAAGATGTTGGTAAAGTCTAAGTCTCTATTTATAAAGGAGTACAACCACAGGCTTTTCAATTGGTTGGTGGCTTTCTCCCTCGTCACGGTTGTGGTTGGCCGGTTTATTATAAAGTTCATTTTGATTGAAATTGGAGGATGGTTACTTTTTATATTTCTGGAGACCTACACAAGGTTGTTTTGGTCAGCAGAGTCACTTTACTACAATCCAGTTTGGCATTTTATAGTTGCATCGTGGGAAACTCTTGTTTACAGCCCAGTCCTTGATCTTGACAGATGGGCTATCCCACTTGGTGTAATAATATCTTTTTTCATTCTATATTGGCGGTGTTATGGGAAAAAGAAACATGGATCACGGTGGCTATTACCATTATATAGCAGCAATAAAAATAGACCAAGAACAGACTAA
Protein sequence

>Msa1036280

MVDEALRQVPNKDRDRNIDMINQIRDSLAIMGDNSTAFSLPQPHLQRTKLCDLKDGELDPSYVKKREKLKELVSSIIRPKIVQGKSLNGKEFVSFLKQILEALNKGEIPSTGSLVEIFNKDILERCLKLYSEKMATLALPLPEGYLQASHDMARGDAMQAFDQQHFGRHHAKKSVTQLDEEIDKVFKNVILQNEYKSSKLCEALYTDCEDMMDQLQVLKLPSMAKFNAGLEKCNRTFEHDCVGPSKANYEGRMAKMLVKSKSLFIKEYNHRLFNWLVAFSLVTVVVGRFIIKFILIEIGGWLLFIFLETYTRLFWSAESLYYNPVWHFIVASWETLVYSPVLDLDRWAIPLGVIISFFILYWRCYGKKKHGSRWLLPLYSSNKNRPRTD*