AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1255030


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1255030 MtrunA17_Chr8g0372991 99.200 375 2 1 1 375 1 374 0.0 766
Msa1255030 MtrunA17_Chr1g0188361 34.530 362 191 12 30 366 50 390 3.24e-52 178
Msa1255030 MtrunA17_Chr5g0423381 34.314 306 167 8 85 370 59 350 6.92e-49 168
Msa1255030 MtrunA17_Chr4g0018641 33.216 283 172 8 85 363 404 673 6.27e-39 147
Msa1255030 MtrunA17_Chr3g0090521 28.342 374 209 12 46 372 95 456 4.91e-31 123
Msa1255030 MtrunA17_Chr5g0419131 25.874 286 175 8 95 371 24 281 1.73e-18 84.7
Msa1255030 MtrunA17_Chr4g0043161 26.766 269 162 8 95 355 68 309 1.69e-15 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1255030 AT4G36530.2 68.681 364 110 2 2 364 3 363 0.0 531
Msa1255030 AT4G36530.1 75.329 304 75 0 61 364 3 306 1.42e-180 504
Msa1255030 AT5G19850.1 34.513 339 179 11 41 364 47 357 6.58e-54 182
Msa1255030 AT5G38520.1 36.093 302 166 11 85 367 67 360 2.44e-45 159
Msa1255030 AT5G38520.2 35.032 314 165 11 85 367 67 372 1.45e-44 158
Msa1255030 AT4G25290.1 34.333 300 176 9 73 367 388 671 1.22e-40 152
Msa1255030 AT5G13800.2 27.041 392 216 11 39 366 29 414 4.64e-35 134
Msa1255030 AT5G13800.1 27.041 392 216 11 39 366 29 414 4.64e-35 134
Msa1255030 AT5G13800.3 27.041 392 216 11 39 366 52 437 6.34e-35 134
Msa1255030 AT5G13800.4 26.842 380 208 11 39 354 29 402 3.88e-33 128
Msa1255030 AT1G13820.1 24.823 282 167 8 95 363 77 326 2.72e-15 76.6
Msa1255030 AT4G12830.1 27.407 270 157 12 99 353 132 377 1.50e-12 68.9

Find 112 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAACCTTGTTTATGGTTTA+AGG 0.103742 8_2:+53449641 None:intergenic
TCAGACCAAAACCTTGTTTA+TGG 0.168859 8_2:+53449634 None:intergenic
TTGTGTTTCTTAGCTAATTC+TGG 0.193349 8_2:+53447583 None:intergenic
ACTTGTGAACTCGGCTTTAT+TGG 0.198322 8_2:-53445463 Msa1255030:CDS
GCCTTAGACTTGCTTGGATT+TGG 0.217148 8_2:-53447553 Msa1255030:CDS
CTGAATTCTGCAGGACAATT+TGG 0.233804 8_2:-53446982 Msa1255030:CDS
CCTTAGACTTGCTTGGATTT+GGG 0.287622 8_2:-53447552 Msa1255030:CDS
GGAGAGAGACTTTAGGAGTA+AGG 0.306647 8_2:+53445427 None:intergenic
ACAATTTGGTGATGGAAATA+AGG 0.310953 8_2:-53446968 Msa1255030:CDS
TTAAACCATAAACAAGGTTT+TGG 0.314186 8_2:-53449639 Msa1255030:five_prime_UTR
CTTGTTCTTATCCATGGTTT+TGG 0.324309 8_2:-53448738 Msa1255030:CDS
ACTGCTTTGATTGCAGCTGC+TGG 0.340528 8_2:-53447036 Msa1255030:CDS
TGTTAAAGAACCAGCAGTTT+TGG 0.341015 8_2:-53447455 Msa1255030:CDS
CCCAAATCCAAGCAAGTCTA+AGG 0.342040 8_2:+53447552 None:intergenic
TATACAATGTTCAAACTGTT+TGG 0.342917 8_2:+53445406 None:intergenic
TTTAAAGGAATTATGGCAAC+TGG 0.352076 8_2:-53449348 Msa1255030:CDS
TAGTTCTTGGATTTATATTC+TGG 0.352366 8_2:-53446873 Msa1255030:CDS
TGCAACAAGAAGGTTTGTTT+TGG 0.356493 8_2:+53449510 None:intergenic
GTCTTGAGCTGGCCGTGTTA+TGG 0.361814 8_2:+53446145 None:intergenic
TAATAAACTTCTCCGGCATT+GGG 0.368100 8_2:+53446122 None:intergenic
CCTCCTCTTGTTCTTATCCA+TGG 0.375495 8_2:-53448744 Msa1255030:CDS
ATGCCGGAGAAGTTTATTAC+AGG 0.380848 8_2:-53446118 Msa1255030:intron
AAGCAGAAGGGTACAACTAT+TGG 0.382332 8_2:-53448812 Msa1255030:CDS
TTGTACCCTTCTGCTTTGTA+TGG 0.383879 8_2:+53448819 None:intergenic
TTCTATTTGCTAATGTTTGA+AGG 0.388850 8_2:+53445098 None:intergenic
TTGCCCGTTGCTTCTGCTAT+GGG 0.392151 8_2:-53445601 Msa1255030:CDS
GTAATAAACTTCTCCGGCAT+TGG 0.392291 8_2:+53446121 None:intergenic
TACACTCTTGATTCTGTGTT+AGG 0.401014 8_2:-53445633 Msa1255030:CDS
TTCCCAAGTTTCCGTGTCAA+TGG 0.402365 8_2:-53449581 Msa1255030:exon
CTTGCCCGTTGCTTCTGCTA+TGG 0.404860 8_2:-53445602 Msa1255030:CDS
AAAATTCACTATGTTGTTCA+AGG 0.411284 8_2:-53448774 Msa1255030:CDS
TGAACTCGGCTTTATTGGAT+TGG 0.414109 8_2:-53445458 Msa1255030:CDS
CTGCTTTGATTGCAGCTGCT+GGG 0.422987 8_2:-53447035 Msa1255030:CDS
GTTTATGCCTTAGACTTGCT+TGG 0.426438 8_2:-53447559 Msa1255030:CDS
AAGCCATTGACACGGAAACT+TGG 0.428335 8_2:+53449578 None:intergenic
ACTGTTTGGAGAGAGACTTT+AGG 0.439212 8_2:+53445420 None:intergenic
CTCTTGTTAACTTGCAAGCC+GGG 0.448412 8_2:-53445512 Msa1255030:CDS
AAAGCCGAGTTCACAAGTTC+CGG 0.451235 8_2:+53445468 None:intergenic
CGCTGGAAAACTTCCTTCAA+AGG 0.459653 8_2:+53446898 None:intergenic
TTGGTGCATCTGCATTCCAC+TGG 0.460716 8_2:-53448719 Msa1255030:CDS
GGGTTGCCTGAGTCTGTCAC+TGG 0.462063 8_2:-53447015 Msa1255030:CDS
GGCAACTGGAGTTTCAGTTA+TGG 0.466052 8_2:-53449334 Msa1255030:CDS
TTGAGCTTGTGAAGTAAGAG+AGG 0.474929 8_2:+53449308 None:intergenic
CACTATGTTGTTCAAGGAGA+AGG 0.476064 8_2:-53448768 Msa1255030:CDS
AGGAGTTGTAATCTAGGAGA+AGG 0.478275 8_2:+53449535 None:intergenic
GTCATCACCATACGATGTAT+AGG 0.482797 8_2:-53445316 Msa1255030:intron
GAGAGAGACTTTAGGAGTAA+GGG 0.485597 8_2:+53445428 None:intergenic
CTATTTCCAACCAAAACTGC+TGG 0.488138 8_2:+53447445 None:intergenic
CTGAGACAAAAGGGAGTCAA+TGG 0.496372 8_2:-53449720 None:intergenic
TAGACTTGCTTGGATTTGGG+TGG 0.508081 8_2:-53447549 Msa1255030:CDS
TTGGTGAGGAGTTGTAATCT+AGG 0.510618 8_2:+53449529 None:intergenic
AAGTTCCGGTATCTCGTCGT+GGG 0.513634 8_2:+53445482 None:intergenic
TATGGGGTGACCTTGATCCA+TGG 0.514896 8_2:-53445584 Msa1255030:CDS
GTGCATCTGCATTCCACTGG+AGG 0.518010 8_2:-53448716 Msa1255030:intron
CACCCCATAGCAGAAGCAAC+GGG 0.519583 8_2:+53445598 None:intergenic
CGGCTTTCCTATACATCGTA+TGG 0.520316 8_2:+53445309 None:intergenic
CTGTCGACGCACATAGACTA+TGG 0.521425 8_2:-53445205 Msa1255030:three_prime_UTR
CTGGACCAACCCATGGATCA+AGG 0.525300 8_2:+53445574 None:intergenic
TGTAATCTAGGAGAAGGAGA+TGG 0.527109 8_2:+53449541 None:intergenic
ACTCTTGTTAACTTGCAAGC+CGG 0.530091 8_2:-53445513 Msa1255030:CDS
CCAGCTCAAGACCCCAATGC+CGG 0.530143 8_2:-53446134 Msa1255030:CDS
AAGGGTACAACTATTGGAAG+TGG 0.535032 8_2:-53448806 Msa1255030:CDS
GTTGTTCTACTGAATTCTGC+AGG 0.538082 8_2:-53446991 Msa1255030:CDS
ATGGGGTGACCTTGATCCAT+GGG 0.543368 8_2:-53445583 Msa1255030:CDS
GCACCTGTAATAAACTTCTC+CGG 0.546799 8_2:+53446115 None:intergenic
AGCCATTGACACGGAAACTT+GGG 0.546918 8_2:+53449579 None:intergenic
TCTGCAGGACAATTTGGTGA+TGG 0.548004 8_2:-53446976 Msa1255030:CDS
TTGAATAACTAACCTTGAGA+TGG 0.548985 8_2:+53449285 None:intergenic
GCTTTCGCTGGACCAACCCA+TGG 0.557610 8_2:+53445567 None:intergenic
ACAAAAGGGAGTCAATGGCT+TGG 0.558006 8_2:-53449715 Msa1255030:five_prime_UTR
GGTGACCTTGATCCATGGGT+TGG 0.562981 8_2:-53445579 Msa1255030:CDS
TTTGATTAGCTATACATACA+AGG 0.565746 8_2:+53445382 None:intergenic
ACAACTCCAGTGACAGACTC+AGG 0.567497 8_2:+53447009 None:intergenic
ATAATGTAAGAATTGAATGC+AGG 0.568687 8_2:+53445167 None:intergenic
AGATTACCATACAAAGCAGA+AGG 0.574456 8_2:-53448825 Msa1255030:CDS
AAGACTGATTCAATCCGAGC+GGG 0.577428 8_2:+53446838 None:intergenic
CAAGTTCCGGTATCTCGTCG+TGG 0.584909 8_2:+53445481 None:intergenic
GATACCGGAACTTGTGAACT+CGG 0.588286 8_2:-53445472 Msa1255030:CDS
AGAGACTTTAGGAGTAAGGG+TGG 0.593616 8_2:+53445431 None:intergenic
TCAAGTCGTGGACTTCATGA+AGG 0.598557 8_2:-53447482 Msa1255030:CDS
TCACCCCATAGCAGAAGCAA+CGG 0.600873 8_2:+53445597 None:intergenic
TGAAAGAAACAAACCTCCAG+TGG 0.601193 8_2:+53448703 None:intergenic
CACAAGATAGTCATCCACAT+TGG 0.603615 8_2:+53446172 None:intergenic
TCACAAGCTCAACCATCTCA+AGG 0.605473 8_2:-53449297 Msa1255030:intron
AGTTCCGGTATCTCGTCGTG+GGG 0.608774 8_2:+53445483 None:intergenic
CTATGATGCCATGGTGTGGA+GGG 0.613064 8_2:-53447506 Msa1255030:CDS
ATGCAGATGCACCAAAACCA+TGG 0.616946 8_2:+53448727 None:intergenic
CCATGGATAAGAACAAGAGG+AGG 0.618576 8_2:+53448744 None:intergenic
GTACAACTATTGGAAGTGGA+AGG 0.621518 8_2:-53448802 Msa1255030:CDS
GTAGTGAAGCTGCAACAAGA+AGG 0.624089 8_2:+53449500 None:intergenic
AGAGACTTACTGTGATAGAG+AGG 0.624478 8_2:+53449478 None:intergenic
ACTATGATGCCATGGTGTGG+AGG 0.627349 8_2:-53447507 Msa1255030:CDS
TGCCCGTTGCTTCTGCTATG+GGG 0.629349 8_2:-53445600 Msa1255030:CDS
ACTCGTCGACTATGATGCCA+TGG 0.630961 8_2:-53447515 Msa1255030:CDS
TCGACTATGATGCCATGGTG+TGG 0.634074 8_2:-53447510 Msa1255030:CDS
TCAAAGCAGTAAATCCTCCA+AGG 0.637932 8_2:+53447049 None:intergenic
AAACCATGGATAAGAACAAG+AGG 0.639520 8_2:+53448741 None:intergenic
CAATGTGGATGACTATCTTG+TGG 0.643108 8_2:-53446171 Msa1255030:CDS
TAAGGAACAGAAAACTTCAG+AGG 0.651193 8_2:-53446950 Msa1255030:CDS
AATAAACTTCTCCGGCATTG+GGG 0.651870 8_2:+53446123 None:intergenic
TAAATCCAAGAACTACACGC+TGG 0.652514 8_2:+53446881 None:intergenic
AGAATTAGCTAAGAAACACA+AGG 0.658213 8_2:-53447581 Msa1255030:CDS
GACTTGATCCCTCCACACCA+TGG 0.665450 8_2:+53447498 None:intergenic
ACAACCTTAAACCATAAACA+AGG 0.666980 8_2:-53449645 Msa1255030:five_prime_UTR
CATGGATAAGAACAAGAGGA+GGG 0.669208 8_2:+53448745 None:intergenic
GGTGTGGAGGGATCAAGTCG+TGG 0.671418 8_2:-53447494 Msa1255030:CDS
GATTACCATACAAAGCAGAA+GGG 0.686937 8_2:-53448824 Msa1255030:CDS
ATCTTGTGGAATCCATAACA+CGG 0.689049 8_2:-53446157 Msa1255030:CDS
ATTGACACGGAAACTTGGGA+AGG 0.692044 8_2:+53449583 None:intergenic
TATACAAGAAGCCATTGACA+CGG 0.694183 8_2:+53449570 None:intergenic
TAAGACTGATTCAATCCGAG+CGG 0.726541 8_2:+53446837 None:intergenic
GTGGTGAAGAGTGAGTGTTG+TGG 0.792274 8_2:+53449686 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAACAAAAAATTAACTTTT+CGG + chr8_2:53447171-53447190 None:intergenic 10.0%
!!! TTTTTAATAAGTTAAAACTA+TGG - chr8_2:53447724-53447743 Msa1255030:intron 10.0%
!!! TTGTATTAGGTTTTTATATT+AGG - chr8_2:53445617-53445636 Msa1255030:CDS 15.0%
!!! TTGTGATTTTTTTTAAAACA+TGG - chr8_2:53445916-53445935 Msa1255030:intron 15.0%
!!! TGTGATTTTTTTTAAAACAT+GGG - chr8_2:53445917-53445936 Msa1255030:intron 15.0%
!!! ATTTTGCTTTTGATATTTAT+TGG - chr8_2:53449011-53449030 Msa1255030:intron 15.0%
!!! TTTAGCTTTTAAAGGAATTA+TGG - chr8_2:53445470-53445489 Msa1255030:CDS 20.0%
!! CTAAGCAATAAAACTAAAAA+AGG + chr8_2:53446161-53446180 None:intergenic 20.0%
!!! TTTCTTAATTTTTTCCCTTT+CGG + chr8_2:53446196-53446215 None:intergenic 20.0%
!! TATAAACAGCACATATAAAA+GGG + chr8_2:53446252-53446271 None:intergenic 20.0%
!! ATATAAACAGCACATATAAA+AGG + chr8_2:53446253-53446272 None:intergenic 20.0%
!! ATAACATTTAATCAAGAAAG+TGG + chr8_2:53446613-53446632 None:intergenic 20.0%
!!! AGTTTTTGAATGTTGTTATT+TGG + chr8_2:53446677-53446696 None:intergenic 20.0%
!! AAGTTATAATATTTATCAGC+TGG + chr8_2:53446834-53446853 None:intergenic 20.0%
!! ATTTCACTTATAATCATTTG+CGG + chr8_2:53447044-53447063 None:intergenic 20.0%
!! TAATAATTCGATGTAAATCT+AGG + chr8_2:53447421-53447440 None:intergenic 20.0%
!! TAGATTTACATCGAATTATT+AGG - chr8_2:53447420-53447439 Msa1255030:intron 20.0%
!! AGACTAAATTTCCAAAATTA+AGG + chr8_2:53447485-53447504 None:intergenic 20.0%
!!! CATGATTTTCGTATTTATTT+TGG - chr8_2:53448321-53448340 Msa1255030:intron 20.0%
!!! ATTTTAGATAAAAGGATAAG+AGG + chr8_2:53448435-53448454 None:intergenic 20.0%
!!! AGTTATGGATTTTAGATAAA+AGG + chr8_2:53448443-53448462 None:intergenic 20.0%
!! TAAATTGAATTGTGTTTGAT+TGG + chr8_2:53448569-53448588 None:intergenic 20.0%
!! CACAATTCAATTTACTTAAA+TGG - chr8_2:53448575-53448594 Msa1255030:intron 20.0%
!! ATATTCATTTAATGATGTTG+TGG + chr8_2:53448859-53448878 None:intergenic 20.0%
!! TGTTATAGATTTATTTCCAA+TGG + chr8_2:53448888-53448907 None:intergenic 20.0%
!! TTGGAAATAAATCTATAACA+AGG - chr8_2:53448888-53448907 Msa1255030:intron 20.0%
!! AAATATATAGTTGACTAGTA+CGG + chr8_2:53448941-53448960 None:intergenic 20.0%
!! AAAACCTTGTTTATGGTTTA+AGG + chr8_2:53445187-53445206 None:intergenic 25.0%
!! TTAAACCATAAACAAGGTTT+TGG - chr8_2:53445186-53445205 Msa1255030:three_prime_UTR 25.0%
!! AAGAAAAACTAAGACTTTTG+AGG + chr8_2:53445222-53445241 None:intergenic 25.0%
!!! AGAAGAAGTTTAGCTTTTAA+AGG - chr8_2:53445462-53445481 Msa1255030:CDS 25.0%
! ACCTTATGTTTAATCTATCT+AGG - chr8_2:53445706-53445725 Msa1255030:intron 25.0%
! TTATGTTTAATCTATCTAGG+CGG - chr8_2:53445709-53445728 Msa1255030:intron 25.0%
! ATTCTATATGCTTATATCCA+TGG - chr8_2:53445947-53445966 Msa1255030:intron 25.0%
! AAAATTCACTATGTTGTTCA+AGG - chr8_2:53446051-53446070 Msa1255030:intron 25.0%
! TAAATGCATATATCGAAAGA+AGG + chr8_2:53446317-53446336 None:intergenic 25.0%
! CGTTCAAATGTTTATTAAAG+TGG - chr8_2:53447131-53447150 Msa1255030:intron 25.0%
!!! TAATTCTGGAATATTGTATC+TGG + chr8_2:53447231-53447250 None:intergenic 25.0%
! TAGTTCTTGGATTTATATTC+TGG - chr8_2:53447952-53447971 Msa1255030:intron 25.0%
! GTTACATAATATCTTCAACT+TGG - chr8_2:53448021-53448040 Msa1255030:intron 25.0%
! GATTTCTTTAAATGCTTGAT+AGG - chr8_2:53448043-53448062 Msa1255030:intron 25.0%
! AGACAATATAAGATACTCTA+CGG + chr8_2:53448255-53448274 None:intergenic 25.0%
! ACAATAATAACCAAGTAACA+TGG + chr8_2:53448292-53448311 None:intergenic 25.0%
! ATTCTTAATTGTCGAAGTTA+TGG + chr8_2:53448458-53448477 None:intergenic 25.0%
! AATTTCGACAACAATTTAGA+TGG + chr8_2:53448976-53448995 None:intergenic 25.0%
! AGGTAGTAGTTAAAAACAAA+AGG + chr8_2:53449119-53449138 None:intergenic 25.0%
!!! AAGTTAACAAGAGTTGTTTT+TGG + chr8_2:53449306-53449325 None:intergenic 25.0%
! TATACAATGTTCAAACTGTT+TGG + chr8_2:53449422-53449441 None:intergenic 25.0%
!! TTTGATTAGCTATACATACA+AGG + chr8_2:53449446-53449465 None:intergenic 25.0%
!!! CTATCCTCAGTATTTTTAAT+CGG + chr8_2:53449539-53449558 None:intergenic 25.0%
! ATTAAAAATACTGAGGATAG+TGG - chr8_2:53449539-53449558 Msa1255030:CDS 25.0%
!!! CTATCCTCAGTATTTTTAAT+CGG + chr8_2:53449539-53449558 None:intergenic 25.0%
! ATTAAAAATACTGAGGATAG+TGG - chr8_2:53449539-53449558 Msa1255030:CDS 25.0%
! ATAATGTAAGAATTGAATGC+AGG + chr8_2:53449661-53449680 None:intergenic 25.0%
ACAACCTTAAACCATAAACA+AGG - chr8_2:53445180-53445199 Msa1255030:three_prime_UTR 30.0%
TTTAAAGGAATTATGGCAAC+TGG - chr8_2:53445477-53445496 Msa1255030:CDS 30.0%
TTGAATAACTAACCTTGAGA+TGG + chr8_2:53445543-53445562 None:intergenic 30.0%
!! TCTATCATTGATTTGAATCG+CGG - chr8_2:53445587-53445606 Msa1255030:CDS 30.0%
CACTCTTTATAAACTCTAGT+CGG - chr8_2:53445683-53445702 Msa1255030:intron 30.0%
GCCTAGATAGATTAAACATA+AGG + chr8_2:53445710-53445729 None:intergenic 30.0%
TATGTTTAATCTATCTAGGC+GGG - chr8_2:53445710-53445729 Msa1255030:intron 30.0%
! TTAAGAGTTTTTGTGTTGTC+TGG - chr8_2:53445873-53445892 Msa1255030:intron 30.0%
TCTTAAAAAGGAAAAAGCCA+TGG + chr8_2:53445967-53445986 None:intergenic 30.0%
!! GCTTTTTCCTTTTTAAGAGA+AGG - chr8_2:53445969-53445988 Msa1255030:intron 30.0%
TCAAGTTCCTTCTCTTAAAA+AGG + chr8_2:53445979-53445998 None:intergenic 30.0%
TAGTTAATGCTTAATCCGAA+AGG - chr8_2:53446178-53446197 Msa1255030:CDS 30.0%
AGTTAATGCTTAATCCGAAA+GGG - chr8_2:53446179-53446198 Msa1255030:CDS 30.0%
!! TTTTAGCTGATTCTCTTGAA+GGG + chr8_2:53446220-53446239 None:intergenic 30.0%
! ATTGCTGTTCAATGTTACTT+AGG + chr8_2:53446404-53446423 None:intergenic 30.0%
CGATATGTTATATTTCATGC+AGG + chr8_2:53446637-53446656 None:intergenic 30.0%
ACATACTAAGATTTATGCGA+AGG + chr8_2:53446861-53446880 None:intergenic 30.0%
!! CTCTTTCTTCTAAGACAAAA+AGG - chr8_2:53446985-53447004 Msa1255030:CDS 30.0%
TTGTGTTTCTTAGCTAATTC+TGG + chr8_2:53447245-53447264 None:intergenic 30.0%
AGAATTAGCTAAGAAACACA+AGG - chr8_2:53447244-53447263 Msa1255030:intron 30.0%
AAATTAAGGAAAACTGTGCA+TGG + chr8_2:53447471-53447490 None:intergenic 30.0%
! TGCACAGTTTTCCTTAATTT+TGG - chr8_2:53447471-53447490 Msa1255030:CDS 30.0%
GTTCAAATTTCACTACACTA+CGG - chr8_2:53447559-53447578 Msa1255030:CDS 30.0%
!! ACAATTTGGTGATGGAAATA+AGG - chr8_2:53447857-53447876 Msa1255030:intron 30.0%
! GTTTTTCCTAAAACCTTTGA+AGG - chr8_2:53447914-53447933 Msa1255030:intron 30.0%
! AAACTTCCTTCAAAGGTTTT+AGG + chr8_2:53447923-53447942 None:intergenic 30.0%
! GAATCAGTCTTAAAAAGTGT+AGG - chr8_2:53447999-53448018 Msa1255030:intron 30.0%
ATTTGTGTCAACAGAATGTT+AGG - chr8_2:53448136-53448155 Msa1255030:intron 30.0%
AGTAGCTTAGTTTATCTCTT+AGG - chr8_2:53448217-53448236 Msa1255030:intron 30.0%
AGTATCTTATATTGTCTCCT+AGG - chr8_2:53448258-53448277 Msa1255030:intron 30.0%
TCTATGTGTCCTTCTAAATA+GGG - chr8_2:53448352-53448371 Msa1255030:intron 30.0%
!!! CTGCTTGTTTTTTTCTTACT+AGG - chr8_2:53448538-53448557 Msa1255030:intron 30.0%
GTATAAAAACTCTTCCAATG+TGG - chr8_2:53448639-53448658 Msa1255030:intron 30.0%
AAATGAATATACGTCTCCAT+TGG - chr8_2:53448869-53448888 Msa1255030:intron 30.0%
! TGTGTTCTAAACAATTCTGT+TGG - chr8_2:53449082-53449101 Msa1255030:intron 30.0%
AAAGCCGATTAAAAATACTG+AGG - chr8_2:53449532-53449551 Msa1255030:CDS 30.0%
! ATAGTGGAAATACGATGTAT+AGG - chr8_2:53449555-53449574 Msa1255030:CDS 30.0%
AAAGCCGATTAAAAATACTG+AGG - chr8_2:53449532-53449551 Msa1255030:CDS 30.0%
!! GGTTGTTTTGTGAATTTGTG+CGG + chr8_2:53445166-53445185 None:intergenic 35.0%
! TCAGACCAAAACCTTGTTTA+TGG + chr8_2:53445194-53445213 None:intergenic 35.0%
TATACAAGAAGCCATTGACA+CGG + chr8_2:53445258-53445277 None:intergenic 35.0%
!! TGCAACAAGAAGGTTTGTTT+TGG + chr8_2:53445318-53445337 None:intergenic 35.0%
CAATGATAGAAGTGAAAGTG+AGG + chr8_2:53445577-53445596 None:intergenic 35.0%
TCAGAGACATGAAAAACTGA+GGG - chr8_2:53445758-53445777 Msa1255030:intron 35.0%
! AACACAGTTTTTGTGTTGTC+CGG - chr8_2:53445831-53445850 Msa1255030:intron 35.0%
GTTGTCTGGATGTATACTTT+CGG - chr8_2:53445887-53445906 Msa1255030:intron 35.0%
AGATTACCATACAAAGCAGA+AGG - chr8_2:53446000-53446019 Msa1255030:intron 35.0%
GATTACCATACAAAGCAGAA+GGG - chr8_2:53446001-53446020 Msa1255030:intron 35.0%
AAACCATGGATAAGAACAAG+AGG + chr8_2:53446087-53446106 None:intergenic 35.0%
! CTTGTTCTTATCCATGGTTT+TGG - chr8_2:53446087-53446106 Msa1255030:intron 35.0%
!! CTTTTAGCTGATTCTCTTGA+AGG + chr8_2:53446221-53446240 None:intergenic 35.0%
GAATTGAATACGCACAGAAT+TGG + chr8_2:53446290-53446309 None:intergenic 35.0%
TCTGATGTCTATACTCCTAA+AGG - chr8_2:53446524-53446543 Msa1255030:intron 35.0%
CTGATGTCTATACTCCTAAA+GGG - chr8_2:53446525-53446544 Msa1255030:intron 35.0%
!! ATTTGGCAATTGAGTTGACT+GGG + chr8_2:53446660-53446679 None:intergenic 35.0%
!! TATTTGGCAATTGAGTTGAC+TGG + chr8_2:53446661-53446680 None:intergenic 35.0%
! GCTTCAAGTTTACTCAATTG+TGG + chr8_2:53446785-53446804 None:intergenic 35.0%
!!! CTTCTCACTTTTTTCGTTGA+TGG - chr8_2:53446882-53446901 Msa1255030:CDS 35.0%
!!! ACTTTTTTCGTTGATGGCAA+AGG - chr8_2:53446888-53446907 Msa1255030:CDS 35.0%
!!! CTTTTTTCGTTGATGGCAAA+GGG - chr8_2:53446889-53446908 Msa1255030:CDS 35.0%
AGCACATTACATGCTATATC+AGG + chr8_2:53446920-53446939 None:intergenic 35.0%
GCTATAGCAACAATCACATT+AGG + chr8_2:53446966-53446985 None:intergenic 35.0%
! TGTTAAAGAACCAGCAGTTT+TGG - chr8_2:53447370-53447389 Msa1255030:intron 35.0%
CGATGTAAATCTAGGTACTA+CGG + chr8_2:53447413-53447432 None:intergenic 35.0%
TTTGGAAATTTAGTCTGTCG+TGG - chr8_2:53447489-53447508 Msa1255030:CDS 35.0%
AACGAATCGTTAACAGATAG+TGG + chr8_2:53447595-53447614 None:intergenic 35.0%
TGCATATCGCAAAACAATAG+TGG - chr8_2:53447621-53447640 Msa1255030:intron 35.0%
TAAGGAACAGAAAACTTCAG+AGG - chr8_2:53447875-53447894 Msa1255030:intron 35.0%
TGAATAAACTTTCACCGAAG+AGG - chr8_2:53448100-53448119 Msa1255030:intron 35.0%
TCAACAGAATGTTAGGAGTT+AGG - chr8_2:53448143-53448162 Msa1255030:intron 35.0%
GTAACATGGAGATTAATCCT+AGG + chr8_2:53448278-53448297 None:intergenic 35.0%
GGATTAATCTCCATGTTACT+TGG - chr8_2:53448279-53448298 Msa1255030:intron 35.0%
GTCTATGTGTCCTTCTAAAT+AGG - chr8_2:53448351-53448370 Msa1255030:intron 35.0%
TCCTTCTAAATAGGGATTAG+TGG - chr8_2:53448360-53448379 Msa1255030:intron 35.0%
ACCACTAATCCCTATTTAGA+AGG + chr8_2:53448364-53448383 None:intergenic 35.0%
GGACTGTTTATTTCCTTTCA+GGG - chr8_2:53448507-53448526 Msa1255030:intron 35.0%
ATCTTGTGGAATCCATAACA+CGG - chr8_2:53448668-53448687 Msa1255030:intron 35.0%
TAATAAACTTCTCCGGCATT+GGG + chr8_2:53448706-53448725 None:intergenic 35.0%
TAAGCAATGTAGATAAGCTG+AGG - chr8_2:53449052-53449071 Msa1255030:intron 35.0%
TACACTCTTGATTCTGTGTT+AGG - chr8_2:53449192-53449211 Msa1255030:intron 35.0%
!!! TTGATTTTGTTAGCTTTCGC+TGG + chr8_2:53449273-53449292 None:intergenic 35.0%
! TTTTGTGAATTTGTGCGGTG+TGG + chr8_2:53445161-53445180 None:intergenic 40.0%
TGTAATCTAGGAGAAGGAGA+TGG + chr8_2:53445287-53445306 None:intergenic 40.0%
AGGAGTTGTAATCTAGGAGA+AGG + chr8_2:53445293-53445312 None:intergenic 40.0%
TTGGTGAGGAGTTGTAATCT+AGG + chr8_2:53445299-53445318 None:intergenic 40.0%
!!! CAAGAAGGTTTGTTTTGGTG+AGG + chr8_2:53445313-53445332 None:intergenic 40.0%
AGAGACTTACTGTGATAGAG+AGG + chr8_2:53445350-53445369 None:intergenic 40.0%
TTGAGCTTGTGAAGTAAGAG+AGG + chr8_2:53445520-53445539 None:intergenic 40.0%
!! ACTCACAAACTGGTTCTGTA+AGG + chr8_2:53445653-53445672 None:intergenic 40.0%
! AGAACCAGTTTGTGAGTTGA+GGG - chr8_2:53445656-53445675 Msa1255030:CDS 40.0%
TGTCTCTGAGTGCAACTTAT+TGG + chr8_2:53445747-53445766 None:intergenic 40.0%
CTCAGAGACATGAAAAACTG+AGG - chr8_2:53445757-53445776 Msa1255030:intron 40.0%
TGTACATCCAAACTGCTTTC+GGG + chr8_2:53445797-53445816 None:intergenic 40.0%
GTGTACATCCAAACTGCTTT+CGG + chr8_2:53445798-53445817 None:intergenic 40.0%
TTGTACCCTTCTGCTTTGTA+TGG + chr8_2:53446009-53446028 None:intergenic 40.0%
! AAGCAGAAGGGTACAACTAT+TGG - chr8_2:53446013-53446032 Msa1255030:intron 40.0%
! AAGGGTACAACTATTGGAAG+TGG - chr8_2:53446019-53446038 Msa1255030:intron 40.0%
GTACAACTATTGGAAGTGGA+AGG - chr8_2:53446023-53446042 Msa1255030:intron 40.0%
CACTATGTTGTTCAAGGAGA+AGG - chr8_2:53446057-53446076 Msa1255030:intron 40.0%
CATGGATAAGAACAAGAGGA+GGG + chr8_2:53446083-53446102 None:intergenic 40.0%
TGAAAGAAACAAACCTCCAG+TGG + chr8_2:53446125-53446144 None:intergenic 40.0%
! GTTTATGCCTTAGACTTGCT+TGG - chr8_2:53447266-53447285 Msa1255030:intron 40.0%
! CCTTAGACTTGCTTGGATTT+GGG - chr8_2:53447273-53447292 Msa1255030:intron 40.0%
!! AAAGAACCAGCAGTTTTGGT+TGG - chr8_2:53447374-53447393 Msa1255030:intron 40.0%
CTATTTCCAACCAAAACTGC+TGG + chr8_2:53447383-53447402 None:intergenic 40.0%
!!! CAGCAGTTTTGGTTGGAAAT+AGG - chr8_2:53447381-53447400 Msa1255030:intron 40.0%
! TCATGATGACTTTTCAGCCT+TGG - chr8_2:53447759-53447778 Msa1255030:intron 40.0%
TCAAAGCAGTAAATCCTCCA+AGG + chr8_2:53447779-53447798 None:intergenic 40.0%
GTTGTTCTACTGAATTCTGC+AGG - chr8_2:53447834-53447853 Msa1255030:intron 40.0%
CTGAATTCTGCAGGACAATT+TGG - chr8_2:53447843-53447862 Msa1255030:intron 40.0%
TAAATCCAAGAACTACACGC+TGG + chr8_2:53447947-53447966 None:intergenic 40.0%
! TAAGACTGATTCAATCCGAG+CGG + chr8_2:53447991-53448010 None:intergenic 40.0%
!! ACGAAAGCTTGTAGCTTTAG+TGG - chr8_2:53448485-53448504 Msa1255030:intron 40.0%
!! CGAAAGCTTGTAGCTTTAGT+GGG - chr8_2:53448486-53448505 Msa1255030:intron 40.0%
GGGACTGTTTATTTCCTTTC+AGG - chr8_2:53448506-53448525 Msa1255030:intron 40.0%
CACAAGATAGTCATCCACAT+TGG + chr8_2:53448656-53448675 None:intergenic 40.0%
CAATGTGGATGACTATCTTG+TGG - chr8_2:53448654-53448673 Msa1255030:intron 40.0%
AATAAACTTCTCCGGCATTG+GGG + chr8_2:53448705-53448724 None:intergenic 40.0%
GTAATAAACTTCTCCGGCAT+TGG + chr8_2:53448707-53448726 None:intergenic 40.0%
ATGCCGGAGAAGTTTATTAC+AGG - chr8_2:53448707-53448726 Msa1255030:intron 40.0%
GCACCTGTAATAAACTTCTC+CGG + chr8_2:53448713-53448732 None:intergenic 40.0%
AACATAGACAAAGACCGACT+AGG + chr8_2:53448750-53448769 None:intergenic 40.0%
TCGGTCTTTGTCTATGTTGT+CGG - chr8_2:53448752-53448771 Msa1255030:CDS 40.0%
!! GTGAGTATGACGGACATAAT+TGG + chr8_2:53448833-53448852 None:intergenic 40.0%
ATTATGTCCGTCATACTCAC+AGG - chr8_2:53448833-53448852 Msa1255030:CDS 40.0%
!! ACTCTTGTTAACTTGCAAGC+CGG - chr8_2:53449312-53449331 Msa1255030:CDS 40.0%
! ACTTGTGAACTCGGCTTTAT+TGG - chr8_2:53449362-53449381 Msa1255030:CDS 40.0%
!! TGAACTCGGCTTTATTGGAT+TGG - chr8_2:53449367-53449386 Msa1255030:CDS 40.0%
! GAGAGAGACTTTAGGAGTAA+GGG + chr8_2:53449400-53449419 None:intergenic 40.0%
ACTGTTTGGAGAGAGACTTT+AGG + chr8_2:53449408-53449427 None:intergenic 40.0%
GTCATCACCATACGATGTAT+AGG - chr8_2:53449509-53449528 Msa1255030:CDS 40.0%
ATTGACACGGAAACTTGGGA+AGG + chr8_2:53445245-53445264 None:intergenic 45.0%
TTCCCAAGTTTCCGTGTCAA+TGG - chr8_2:53445244-53445263 Msa1255030:three_prime_UTR 45.0%
AGCCATTGACACGGAAACTT+GGG + chr8_2:53445249-53445268 None:intergenic 45.0%
AAGCCATTGACACGGAAACT+TGG + chr8_2:53445250-53445269 None:intergenic 45.0%
GTAGTGAAGCTGCAACAAGA+AGG + chr8_2:53445328-53445347 None:intergenic 45.0%
GGCAACTGGAGTTTCAGTTA+TGG - chr8_2:53445491-53445510 Msa1255030:CDS 45.0%
TCACAAGCTCAACCATCTCA+AGG - chr8_2:53445528-53445547 Msa1255030:CDS 45.0%
CAGAACCAGTTTGTGAGTTG+AGG - chr8_2:53445655-53445674 Msa1255030:CDS 45.0%
! GAACCAGTTTGTGAGTTGAG+GGG - chr8_2:53445657-53445676 Msa1255030:CDS 45.0%
TAATCTATCTAGGCGGGACT+TGG - chr8_2:53445716-53445735 Msa1255030:intron 45.0%
GAGACATGAAAAACTGAGGG+AGG - chr8_2:53445761-53445780 Msa1255030:intron 45.0%
! TTTTCCACCCGAAAGCAGTT+TGG - chr8_2:53445787-53445806 Msa1255030:intron 45.0%
! GTTGTCCGGATGTGTGTTTT+CGG - chr8_2:53445845-53445864 Msa1255030:intron 45.0%
TTCGTCCGAAAACACACATC+CGG + chr8_2:53445853-53445872 None:intergenic 45.0%
CCATGGATAAGAACAAGAGG+AGG + chr8_2:53446084-53446103 None:intergenic 45.0%
CCTCCTCTTGTTCTTATCCA+TGG - chr8_2:53446081-53446100 Msa1255030:intron 45.0%
ATGCAGATGCACCAAAACCA+TGG + chr8_2:53446101-53446120 None:intergenic 45.0%
GAACAGCAATCAATCTGTGC+AGG - chr8_2:53446414-53446433 Msa1255030:intron 45.0%
ACTCCTAAAGGGAAGAGAAG+AGG - chr8_2:53446536-53446555 Msa1255030:intron 45.0%
GTTCCTCTTCTCTTCCCTTT+AGG + chr8_2:53446542-53446561 None:intergenic 45.0%
TGTCTTTGCAGTGTATGCAG+TGG - chr8_2:53447018-53447037 Msa1255030:CDS 45.0%
! GCCTTAGACTTGCTTGGATT+TGG - chr8_2:53447272-53447291 Msa1255030:intron 45.0%
CCCAAATCCAAGCAAGTCTA+AGG + chr8_2:53447276-53447295 None:intergenic 45.0%
! TAGACTTGCTTGGATTTGGG+TGG - chr8_2:53447276-53447295 Msa1255030:intron 45.0%
TCAAGTCGTGGACTTCATGA+AGG - chr8_2:53447343-53447362 Msa1255030:intron 45.0%
GGAAATTTAGTCTGTCGTGG+TGG - chr8_2:53447492-53447511 Msa1255030:CDS 45.0%
! TGATGACTTTTCAGCCTTGG+AGG - chr8_2:53447762-53447781 Msa1255030:intron 45.0%
! TCTGCAGGACAATTTGGTGA+TGG - chr8_2:53447849-53447868 Msa1255030:intron 45.0%
CGCTGGAAAACTTCCTTCAA+AGG + chr8_2:53447930-53447949 None:intergenic 45.0%
! GTTTTCCAGCGTGTAGTTCT+TGG - chr8_2:53447939-53447958 Msa1255030:intron 45.0%
! AAGACTGATTCAATCCGAGC+GGG + chr8_2:53447990-53448009 None:intergenic 45.0%
TATGCCTTGATGAGCCTCTT+CGG + chr8_2:53448117-53448136 None:intergenic 45.0%
AGCAGAACTAAGTCCCTGAA+AGG + chr8_2:53448523-53448542 None:intergenic 45.0%
! ATTGCGTAGCTTGTCAATGC+AGG - chr8_2:53448615-53448634 Msa1255030:intron 45.0%
TAGACAAAGACCGACTAGGA+CGG + chr8_2:53448746-53448765 None:intergenic 45.0%
TCTGTCATGCCACACTATAC+AGG + chr8_2:53448782-53448801 None:intergenic 45.0%
CCTGCAGAGAACAATATGTC+AGG + chr8_2:53449139-53449158 None:intergenic 45.0%
CCTGACATATTGTTCTCTGC+AGG - chr8_2:53449136-53449155 Msa1255030:intron 45.0%
!! CTCTTGTTAACTTGCAAGCC+GGG - chr8_2:53449313-53449332 Msa1255030:CDS 45.0%
GATACCGGAACTTGTGAACT+CGG - chr8_2:53449353-53449372 Msa1255030:CDS 45.0%
AAAGCCGAGTTCACAAGTTC+CGG + chr8_2:53449360-53449379 None:intergenic 45.0%
! AGAGACTTTAGGAGTAAGGG+TGG + chr8_2:53449397-53449416 None:intergenic 45.0%
! GGAGAGAGACTTTAGGAGTA+AGG + chr8_2:53449401-53449420 None:intergenic 45.0%
CGGCTTTCCTATACATCGTA+TGG + chr8_2:53449519-53449538 None:intergenic 45.0%
!! AACTTATTAAAAAAAAAAAT+AGG + chr8_2:53447717-53447736 None:intergenic 5.0%
! GTGGTGAAGAGTGAGTGTTG+TGG + chr8_2:53445142-53445161 None:intergenic 50.0%
TCGCGGAATCGCGTTGTATT+AGG - chr8_2:53445604-53445623 Msa1255030:CDS 50.0%
ACATCCAAACTGCTTTCGGG+TGG + chr8_2:53445794-53445813 None:intergenic 50.0%
TTGGTGCATCTGCATTCCAC+TGG - chr8_2:53446106-53446125 Msa1255030:intron 50.0%
! ACTCGTCGACTATGATGCCA+TGG - chr8_2:53447310-53447329 Msa1255030:intron 50.0%
TCGACTATGATGCCATGGTG+TGG - chr8_2:53447315-53447334 Msa1255030:intron 50.0%
ACTATGATGCCATGGTGTGG+AGG - chr8_2:53447318-53447337 Msa1255030:intron 50.0%
CTATGATGCCATGGTGTGGA+GGG - chr8_2:53447319-53447338 Msa1255030:intron 50.0%
TGTCGTGGTGGCAAACACAA+CGG - chr8_2:53447504-53447523 Msa1255030:CDS 50.0%
CTATTTGTCGTGACCAGCGA+TGG + chr8_2:53447533-53447552 None:intergenic 50.0%
ACTGCTTTGATTGCAGCTGC+TGG - chr8_2:53447789-53447808 Msa1255030:intron 50.0%
CTGCTTTGATTGCAGCTGCT+GGG - chr8_2:53447790-53447809 Msa1255030:intron 50.0%
ACAACTCCAGTGACAGACTC+AGG + chr8_2:53447819-53447838 None:intergenic 50.0%
TTCACCGAAGAGGCTCATCA+AGG - chr8_2:53448110-53448129 Msa1255030:intron 50.0%
ATGACCGTTTCCGTCCTAGT+CGG - chr8_2:53448733-53448752 Msa1255030:CDS 50.0%
AAGACCGACTAGGACGGAAA+CGG + chr8_2:53448740-53448759 None:intergenic 50.0%
GTCGGATTGCCTGTATAGTG+TGG - chr8_2:53448770-53448789 Msa1255030:CDS 50.0%
GGAACTGTAGCTATGACAGC+AGG + chr8_2:53448812-53448831 None:intergenic 50.0%
GTTGTGGCCTGTGAGTATGA+CGG + chr8_2:53448843-53448862 None:intergenic 50.0%
TTGCCCGTTGCTTCTGCTAT+GGG - chr8_2:53449224-53449243 Msa1255030:intron 50.0%
TCACCCCATAGCAGAAGCAA+CGG + chr8_2:53449231-53449250 None:intergenic 50.0%
TATGGGGTGACCTTGATCCA+TGG - chr8_2:53449241-53449260 Msa1255030:intron 50.0%
ATGGGGTGACCTTGATCCAT+GGG - chr8_2:53449242-53449261 Msa1255030:intron 50.0%
AAGTTCCGGTATCTCGTCGT+GGG + chr8_2:53449346-53449365 None:intergenic 50.0%
CTGTCGACGCACATAGACTA+TGG - chr8_2:53449620-53449639 Msa1255030:five_prime_UTR 50.0%
ACGCCCCTCAACTCACAAAC+TGG + chr8_2:53445663-53445682 None:intergenic 55.0%
GTGCATCTGCATTCCACTGG+AGG - chr8_2:53446109-53446128 Msa1255030:intron 55.0%
GACTTGATCCCTCCACACCA+TGG + chr8_2:53447330-53447349 None:intergenic 55.0%
AACACAACGGTGTCCATCGC+TGG - chr8_2:53447517-53447536 Msa1255030:CDS 55.0%
GTCTTGAGCTGGCCGTGTTA+TGG + chr8_2:53448683-53448702 None:intergenic 55.0%
CTTGCCCGTTGCTTCTGCTA+TGG - chr8_2:53449223-53449242 Msa1255030:intron 55.0%
TGCCCGTTGCTTCTGCTATG+GGG - chr8_2:53449225-53449244 Msa1255030:intron 55.0%
CACCCCATAGCAGAAGCAAC+GGG + chr8_2:53449230-53449249 None:intergenic 55.0%
GGTGACCTTGATCCATGGGT+TGG - chr8_2:53449246-53449265 Msa1255030:intron 55.0%
CTGGACCAACCCATGGATCA+AGG + chr8_2:53449254-53449273 None:intergenic 55.0%
AGTTCCGGTATCTCGTCGTG+GGG + chr8_2:53449345-53449364 None:intergenic 55.0%
CAAGTTCCGGTATCTCGTCG+TGG + chr8_2:53449347-53449366 None:intergenic 55.0%
GGTGTGGAGGGATCAAGTCG+TGG - chr8_2:53447331-53447350 Msa1255030:intron 60.0%
GGGTTGCCTGAGTCTGTCAC+TGG - chr8_2:53447810-53447829 Msa1255030:intron 60.0%
CCAGCTCAAGACCCCAATGC+CGG - chr8_2:53448691-53448710 Msa1255030:intron 60.0%
GCTTTCGCTGGACCAACCCA+TGG + chr8_2:53449261-53449280 None:intergenic 60.0%
TTGCCCCCACGACGAGATAC+CGG - chr8_2:53449338-53449357 Msa1255030:CDS 60.0%
GTTCCGGTATCTCGTCGTGG+GGG + chr8_2:53449344-53449363 None:intergenic 60.0%
GGCAGTCGAAGCAACCCGCT+CGG - chr8_2:53447973-53447992 Msa1255030:intron 65.0%
! CCGGCATTGGGGTCTTGAGC+TGG + chr8_2:53448694-53448713 None:intergenic 65.0%
CTCGTCGTGGGGGCAATGCC+CGG + chr8_2:53449334-53449353 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 53445113 53449734 53445113 ID=Msa1255030;Name=Msa1255030
chr8_2 mRNA 53445113 53449734 53445113 ID=Msa1255030-mRNA-1;Parent=Msa1255030;Name=Msa1255030-mRNA-1;_AED=0.03;_eAED=0.03;_QI=150|1|1|1|0.85|0.75|8|257|375
chr8_2 exon 53445113 53445270 53445113 ID=Msa1255030-mRNA-1:exon:16532;Parent=Msa1255030-mRNA-1
chr8_2 exon 53445317 53445689 53445317 ID=Msa1255030-mRNA-1:exon:16531;Parent=Msa1255030-mRNA-1
chr8_2 exon 53446119 53446210 53446119 ID=Msa1255030-mRNA-1:exon:16530;Parent=Msa1255030-mRNA-1
chr8_2 exon 53446831 53447071 53446831 ID=Msa1255030-mRNA-1:exon:16529;Parent=Msa1255030-mRNA-1
chr8_2 exon 53447445 53447615 53447445 ID=Msa1255030-mRNA-1:exon:16528;Parent=Msa1255030-mRNA-1
chr8_2 exon 53448717 53448861 53448717 ID=Msa1255030-mRNA-1:exon:16527;Parent=Msa1255030-mRNA-1
chr8_2 exon 53449298 53449405 53449298 ID=Msa1255030-mRNA-1:exon:16526;Parent=Msa1255030-mRNA-1
chr8_2 exon 53449488 53449734 53449488 ID=Msa1255030-mRNA-1:exon:16525;Parent=Msa1255030-mRNA-1
chr8_2 five_prime_UTR 53449585 53449734 53449585 ID=Msa1255030-mRNA-1:five_prime_utr;Parent=Msa1255030-mRNA-1
chr8_2 CDS 53449488 53449584 53449488 ID=Msa1255030-mRNA-1:cds;Parent=Msa1255030-mRNA-1
chr8_2 CDS 53449298 53449405 53449298 ID=Msa1255030-mRNA-1:cds;Parent=Msa1255030-mRNA-1
chr8_2 CDS 53448717 53448861 53448717 ID=Msa1255030-mRNA-1:cds;Parent=Msa1255030-mRNA-1
chr8_2 CDS 53447445 53447615 53447445 ID=Msa1255030-mRNA-1:cds;Parent=Msa1255030-mRNA-1
chr8_2 CDS 53446831 53447071 53446831 ID=Msa1255030-mRNA-1:cds;Parent=Msa1255030-mRNA-1
chr8_2 CDS 53446119 53446210 53446119 ID=Msa1255030-mRNA-1:cds;Parent=Msa1255030-mRNA-1
chr8_2 CDS 53445416 53445689 53445416 ID=Msa1255030-mRNA-1:cds;Parent=Msa1255030-mRNA-1
chr8_2 three_prime_UTR 53445317 53445415 53445317 ID=Msa1255030-mRNA-1:three_prime_utr;Parent=Msa1255030-mRNA-1
chr8_2 three_prime_UTR 53445113 53445270 53445113 ID=Msa1255030-mRNA-1:three_prime_utr;Parent=Msa1255030-mRNA-1
Gene Sequence

>Msa1255030

ATGGCTTCTTGTATATCTACTCCATCTCCTTCTCCTAGATTACAACTCCTCACCAAAACAAACCTTCTTGTTGCAGCTTCACTACCTCTCTATCACAAAAGTAAATGTGAATTGAACAGAAGAAGTTTAGCTTTTAAAGGAATTATGGCAACTGGAGTTTCAGTTATGGCTTCCTCTCTTACTTCACAAGCTCAACCATCTCAAGAGAAGGAACTTGAAAGATTACCATACAAAGCAGAAGGGTACAACTATTGGAAGTGGAAGGATCATAAAATTCACTATGTTGTTCAAGGAGAAGGCCCTCCTCTTGTTCTTATCCATGGTTTTGGTGCATCTGCATTCCACTGGAGATACAATATTCCAGAATTAGCTAAGAAACACAAGGTTTATGCCTTAGACTTGCTTGGATTTGGGTGGAGTGACAAAGCACTCGTCGACTATGATGCCATGGTGTGGAGGGATCAAGTCGTGGACTTCATGAAGGAAATTGTTAAAGAACCAGCAGTTTTGGTTGGAAATAGCCTTGGAGGATTTACTGCTTTGATTGCAGCTGCTGGGTTGCCTGAGTCTGTCACTGGAGTTGTTCTACTGAATTCTGCAGGACAATTTGGTGATGGAAATAAGGAACAGAAAACTTCAGAGGAAACATCTCTACAAAAGTTTTTCCTAAAACCTTTGAAGGAAGTTTTCCAGCGTGTAGTTCTTGGATTTATATTCTGGCAGTCGAAGCAACCCGCTCGGATTGAATCAGTCTTAAAAAGTGTGTATAAAAACTCTTCCAATGTGGATGACTATCTTGTGGAATCCATAACACGGCCAGCTCAAGACCCCAATGCCGGAGAAGTTTATTACAGGTTAATGACACGCTTCATGATGAATCAAAGCAAGTACACTCTTGATTCTGTGTTAGGCGAACTCTCTTGCCCGTTGCTTCTGCTATGGGGTGACCTTGATCCATGGGTTGGTCCAGCGAAAGCTAACAAAATCAAAGAGTTTTATCCAAAAACAACTCTTGTTAACTTGCAAGCCGGGCATTGCCCCCACGACGAGATACCGGAACTTGTGAACTCGGCTTTATTGGATTGGCTCGCCACCCTTACTCCTAAAGTCTCTCTCCAAACAGTTTGA

Protein sequence

>Msa1255030

MASCISTPSPSPRLQLLTKTNLLVAASLPLYHKSKCELNRRSLAFKGIMATGVSVMASSLTSQAQPSQEKELERLPYKAEGYNYWKWKDHKIHYVVQGEGPPLVLIHGFGASAFHWRYNIPELAKKHKVYALDLLGFGWSDKALVDYDAMVWRDQVVDFMKEIVKEPAVLVGNSLGGFTALIAAAGLPESVTGVVLLNSAGQFGDGNKEQKTSEETSLQKFFLKPLKEVFQRVVLGFIFWQSKQPARIESVLKSVYKNSSNVDDYLVESITRPAQDPNAGEVYYRLMTRFMMNQSKYTLDSVLGELSCPLLLLWGDLDPWVGPAKANKIKEFYPKTTLVNLQAGHCPHDEIPELVNSALLDWLATLTPKVSLQTV*