AlfalfaGEDB | MS.gene003357

M. sativa cultivar XinJiangDaYe / MS.gene003357

KEGG: K22395
GO: GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0008150 GO:0008152 GO:0016491 GO:0036094 GO:0043167 GO:0043168 GO:0048037 GO:0050660 GO:0050662 GO:0055114 GO:0071949 GO:0097159 GO:1901265 GO:1901363
PFAM: PF01565.26 PF08031.15

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003357.t1	XP_003594602.1	98.2	545	10	0	1	545	1	545	0.00E+00	1094

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003357.t1	Q93ZA3	66.0	529	174	2	1	527	6	530	1.3e-211	737.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003357.t1	G7IML7	98.2	545	10	0	1	545	1	545	0.0e+00	1094.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene003357	MS.gene63533	PPI
MS.gene003357	MS.gene28725	PPI
MS.gene003357	MS.gene36421	PPI
MS.gene003357	MS.gene28723	PPI
MS.gene003357	MS.gene35083	PPI
MS.gene003357	MS.gene35102	PPI
MS.gene003357	MS.gene28742	PPI
MS.gene003357	MS.gene028353	PPI
MS.gene003357	MS.gene009481	PPI
MS.gene003357	MS.gene56282	PPI
MS.gene003357	MS.gene51643	PPI
MS.gene003357	MS.gene51644	PPI
MS.gene003357	MS.gene56279	PPI
MS.gene003357	MS.gene36438	PPI
MS.gene003357	MS.gene28726	PPI
MS.gene003357	MS.gene35106	PPI
MS.gene003357	MS.gene36439	PPI
MS.gene003357	MS.gene63532	PPI
MS.gene003357	MS.gene28727	PPI
MS.gene003357	MS.gene51646	PPI
MS.gene003357	MS.gene009479	PPI
MS.gene003357	MS.gene35105	PPI
MS.gene003357	MS.gene36435	PPI
MS.gene003357	MS.gene028354	PPI
MS.gene003357	MS.gene28724	PPI
MS.gene003357	MS.gene35103	PPI
MS.gene003357	MS.gene36437	PPI
MS.gene003357	MS.gene028357	PPI
MS.gene003357	MS.gene56278	PPI
MS.gene003357	MS.gene63535	PPI
MS.gene003357	MS.gene35104	PPI
MS.gene003357	MS.gene028352	PPI
MS.gene003357	MS.gene028369	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003357.t1	MTR_2g031390	98.165	545	10	0	1	545	1	545	0.0	1114
MS.gene003357.t1	MTR_4g094518	80.000	505	101	0	27	531	28	532	0.0	827
MS.gene003357.t1	MTR_4g094520	71.238	525	150	1	7	531	11	534	0.0	768
MS.gene003357.t1	MTR_4g094488	53.383	532	233	7	8	527	7	535	0.0	568
MS.gene003357.t1	MTR_4g094492	52.150	535	242	7	6	529	5	536	0.0	564
MS.gene003357.t1	MTR_3g009760	53.788	528	232	7	7	529	2	522	0.0	564
MS.gene003357.t1	MTR_2g031560	51.336	524	249	5	9	529	3	523	0.0	562
MS.gene003357.t1	MTR_4g094495	52.523	535	238	7	7	527	6	538	0.0	560
MS.gene003357.t1	MTR_3g009820	53.788	528	232	8	7	529	2	522	0.0	558
MS.gene003357.t1	MTR_2g031590	51.052	523	249	4	13	530	13	533	0.0	556
MS.gene003357.t1	MTR_4g094480	52.354	531	240	7	7	527	6	533	0.0	554
MS.gene003357.t1	MTR_4g094478	51.306	536	250	6	6	532	5	538	0.0	552
MS.gene003357.t1	MTR_3g009880	52.863	524	236	8	9	529	5	520	0.0	549
MS.gene003357.t1	MTR_4g094498	53.479	503	228	3	32	533	41	538	0.0	545
MS.gene003357.t1	MTR_2g031460	51.215	535	251	6	9	539	8	536	0.0	541
MS.gene003357.t1	MTR_2g031420	52.571	525	240	5	9	529	8	527	0.0	541
MS.gene003357.t1	MTR_4g094418	55.378	437	185	5	101	529	1	435	2.43e-180	521
MS.gene003357.t1	MTR_2g031510	49.222	514	254	4	21	530	31	541	5.94e-173	500
MS.gene003357.t1	MTR_2g031490	47.689	541	267	7	2	530	3	539	5.46e-172	497
MS.gene003357.t1	MTR_4g094515	49.064	534	263	5	3	530	621	1151	6.75e-172	517
MS.gene003357.t1	MTR_4g094515	49.609	512	251	4	25	532	35	543	2.36e-162	492
MS.gene003357.t1	MTR_4g091150	50.099	507	245	7	28	529	37	540	6.61e-169	489
MS.gene003357.t1	MTR_4g091200	48.092	524	255	8	10	527	12	524	6.93e-168	486
MS.gene003357.t1	MTR_6g017205	46.542	535	273	7	9	539	11	536	1.14e-165	481
MS.gene003357.t1	MTR_4g057990	47.810	525	261	8	7	527	5	520	9.73e-165	478
MS.gene003357.t1	MTR_4g091190	47.328	524	263	7	9	527	11	526	3.50e-164	477
MS.gene003357.t1	MTR_4g088355	46.640	506	259	8	28	527	31	531	1.12e-158	463
MS.gene003357.t1	MTR_4g091170	46.476	454	221	6	76	527	107	540	5.67e-151	445
MS.gene003357.t1	MTR_2g023590	45.708	466	245	5	65	527	4	464	4.24e-145	426
MS.gene003357.t1	MTR_1g076830	41.431	531	296	7	16	538	21	544	8.37e-134	400
MS.gene003357.t1	MTR_3g009850	56.140	228	98	2	304	529	1	228	4.06e-86	266
MS.gene003357.t1	MTR_2g031600	51.502	233	111	1	13	245	14	244	2.14e-78	252
MS.gene003357.t1	MTR_2g031600	51.592	157	75	1	375	530	245	401	2.56e-52	184
MS.gene003357.t1	MTR_2g084370	45.946	111	38	2	127	237	1	89	9.69e-28	107
MS.gene003357.t1	MTR_8g062280	52.577	97	18	1	430	526	4	72	3.51e-26	102
MS.gene003357.t1	MTR_2g084405	48.913	92	42	1	127	218	1	87	7.05e-21	88.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003357.t1	AT1G30760	68.182	506	155	2	24	527	47	548	0.0	719
MS.gene003357.t1	AT1G30760	68.182	506	155	2	24	527	29	530	0.0	719
MS.gene003357.t1	AT2G34790	65.649	524	173	3	6	527	10	528	0.0	712
MS.gene003357.t1	AT5G44400	64.179	536	180	7	3	529	4	536	0.0	685
MS.gene003357.t1	AT5G44390	60.444	541	200	8	2	531	5	542	0.0	654
MS.gene003357.t1	AT5G44380	59.612	515	200	5	21	530	69	580	0.0	612
MS.gene003357.t1	AT5G44380	59.612	515	200	5	21	530	29	540	0.0	610
MS.gene003357.t1	AT5G44360	49.609	512	242	8	27	531	30	532	9.34e-172	496
MS.gene003357.t1	AT5G44360	49.609	512	242	8	27	531	46	548	9.78e-172	497
MS.gene003357.t1	AT1G30700	47.538	528	269	5	8	530	3	527	3.02e-170	493
MS.gene003357.t1	AT4G20840	49.706	511	241	7	26	529	34	535	4.34e-168	487
MS.gene003357.t1	AT1G11770	47.378	534	262	9	9	530	4	530	6.41e-168	487
MS.gene003357.t1	AT4G20820	46.654	523	263	6	10	529	17	526	1.34e-166	483
MS.gene003357.t1	AT4G20860	47.860	514	255	7	23	529	22	529	2.01e-165	480
MS.gene003357.t1	AT1G30710	45.826	539	271	9	1	529	1	528	4.13e-162	472
MS.gene003357.t1	AT1G34575	45.880	534	270	11	1	527	1	522	1.07e-159	466
MS.gene003357.t1	AT5G44440	45.301	532	273	8	6	527	4	527	2.18e-159	465
MS.gene003357.t1	AT1G26380	45.627	526	273	8	8	529	9	525	1.43e-158	463
MS.gene003357.t1	AT5G44440	45.301	532	273	8	6	527	74	597	2.34e-158	465
MS.gene003357.t1	AT1G30730	45.802	524	274	7	9	527	5	523	2.76e-157	459
MS.gene003357.t1	AT5G44410	46.717	533	255	10	9	527	10	527	2.13e-155	455
MS.gene003357.t1	AT1G26420	45.369	529	277	8	9	531	5	527	2.17e-155	454
MS.gene003357.t1	AT1G30740	46.816	534	267	9	8	530	2	529	1.32e-154	453
MS.gene003357.t1	AT1G30740	46.816	534	267	9	8	530	5	532	1.33e-154	453
MS.gene003357.t1	AT4G20800	45.020	502	271	4	28	528	27	524	2.84e-154	452
MS.gene003357.t1	AT1G26390	46.047	506	266	5	29	531	28	529	1.94e-153	450
MS.gene003357.t1	AT1G01980	47.013	519	256	9	23	530	25	535	1.37e-152	448
MS.gene003357.t1	AT4G20830	46.617	532	266	8	22	544	31	553	1.40e-152	449
MS.gene003357.t1	AT1G30720	45.720	514	271	6	17	527	16	524	1.42e-152	447
MS.gene003357.t1	AT4G20830	47.379	515	255	7	22	529	31	536	1.86e-152	447
MS.gene003357.t1	AT1G26400	43.551	535	289	7	1	531	1	526	6.03e-150	441
MS.gene003357.t1	AT1G26410	43.849	504	276	6	30	531	53	551	9.30e-147	433
MS.gene003357.t1	AT2G34810	44.767	516	272	8	23	529	28	539	3.61e-145	429

Find 102 sgRNAs with CRISPR-Local

Find 123 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGCACAAAATCTAAGGTATT+TGG	0.215393	2.3:-58862645	MS.gene003357:CDS
TGCATCTTGTTCTAAGCTTT+TGG	0.224617	2.3:+58862058	None:intergenic
AAGATAGTCCTTTGATGATT+TGG	0.231971	2.3:-58861641	MS.gene003357:CDS
TATTCTTGATAGAAAATCTA+TGG	0.264794	2.3:-58862195	MS.gene003357:CDS
GCTTTATACAAGCATCTTCT+TGG	0.275991	2.3:-58861371	MS.gene003357:CDS
GTGAATATAAATTCAGGTTT+TGG	0.276315	2.3:+58862611	None:intergenic
AATATTTACATTGCGAAGTT+TGG	0.281975	2.3:+58862442	None:intergenic
AATCCTTGTAAACCGGTTTC+CGG	0.282366	2.3:+58861684	None:intergenic
AAATTCAGTATTTAACTCTT+TGG	0.286256	2.3:-58861542	MS.gene003357:CDS
CAAGCAAGATTGTTCATAAA+TGG	0.288571	2.3:-58862037	MS.gene003357:CDS
ATTCTTCAGCACAAAATCTA+AGG	0.299578	2.3:-58862652	MS.gene003357:CDS
AAACCGGTTTACAAGGATTA+TGG	0.299624	2.3:-58861680	MS.gene003357:CDS
GCTGGTCTTTGCACAAGTTT+AGG	0.303745	2.3:-58862323	MS.gene003357:CDS
GGTGGTGGAGGTGGAAGTTT+TGG	0.306896	2.3:-58862146	MS.gene003357:CDS
CTATCGGCGAAGTGTATTAT+AGG	0.306957	2.3:-58862379	MS.gene003357:CDS
TGTTTAGTCAAACCTAATTC+AGG	0.315729	2.3:+58861852	None:intergenic
ACTTCAGGTGGTGTATCATT+TGG	0.350972	2.3:+58861777	None:intergenic
AACTATAGAGATCTTGATTT+GGG	0.358282	2.3:-58861417	MS.gene003357:CDS
TGTAAACCGGTTTCCGGTAT+CGG	0.360690	2.3:+58861690	None:intergenic
AAATGCAAGAGATGGGAATA+AGG	0.364388	2.3:-58861216	None:intergenic
TTTAGTTGCATAGTTGAAAC+TGG	0.369940	2.3:+58861246	None:intergenic
CTTTATACAAGCATCTTCTT+GGG	0.371318	2.3:-58861370	MS.gene003357:CDS
AAGGGTGTGAATATAAATTC+AGG	0.373832	2.3:+58862605	None:intergenic
TTGGACATGTGAATCGGTTA+AGG	0.375346	2.3:+58862586	None:intergenic
GGATCCATGATGAGAAAATA+TGG	0.381854	2.3:-58862269	MS.gene003357:CDS
AAATCTGTTCTGTATATTGC+AGG	0.384954	2.3:-58861804	MS.gene003357:CDS
GTTCCATTTCTATGAGGAAA+AGG	0.388022	2.3:+58861573	None:intergenic
GGTGTTGGTGGACACATAAC+AGG	0.389612	2.3:-58862302	MS.gene003357:CDS
GAACTATAGAGATCTTGATT+TGG	0.391233	2.3:-58861418	MS.gene003357:CDS
CATGAGAAAAGTGATGTTCA+TGG	0.393952	2.3:-58862353	MS.gene003357:CDS
GTGTAAATTGATGCATAAAA+TGG	0.398923	2.3:+58862707	None:intergenic
GATGTTCATGGTTTCCCTGC+TGG	0.402996	2.3:-58862341	MS.gene003357:CDS
TTGTTCATCATGCCACCATA+TGG	0.406387	2.3:+58861615	None:intergenic
AGGATTATGGCAAAGGTTGT+TGG	0.408844	2.3:-58861667	MS.gene003357:CDS
CAAAGATAATTTCAATAGGT+TGG	0.410828	2.3:-58861334	MS.gene003357:CDS
CTTGGAAACTTAGACACATA+AGG	0.417454	2.3:+58861453	None:intergenic
GCTATTAGAGGTGGTGGAGG+TGG	0.420433	2.3:-58862155	MS.gene003357:CDS
TTTCCTTCAAGCAAAACTTC+AGG	0.421604	2.3:+58861762	None:intergenic
TATTTAACTCTTTGGCAAGA+TGG	0.424710	2.3:-58861534	MS.gene003357:CDS
TTGAACAAGTAACAGCTACT+TGG	0.425622	2.3:+58862567	None:intergenic
CACATAACAGGAGGTGCATA+TGG	0.426699	2.3:-58862290	MS.gene003357:CDS
TGCTCAATTCCTAGGTGATT+CGG	0.429054	2.3:-58861907	MS.gene003357:CDS
AACTTTCCTTCATAACTTGA+AGG	0.432029	2.3:+58861877	None:intergenic
ATTTCAAAGATAATTTCAAT+AGG	0.435565	2.3:-58861338	MS.gene003357:CDS
ATACCGGAAACCGGTTTACA+AGG	0.436500	2.3:-58861687	MS.gene003357:CDS
CAAAGCATGTTGATTGGATC+AGG	0.438597	2.3:-58861497	MS.gene003357:CDS
TTGGAAACTTAGACACATAA+GGG	0.449567	2.3:+58861454	None:intergenic
ATCATTACCAAGTTCATACT+TGG	0.455337	2.3:-58862828	MS.gene003357:CDS
TTGCCATAATCCTTGTAAAC+CGG	0.455650	2.3:+58861677	None:intergenic
TGGATCCTGAAAATGTGTTC+AGG	0.457657	2.3:-58861293	MS.gene003357:CDS
ATGCATCAAAGCATGTTGAT+TGG	0.458369	2.3:-58861503	MS.gene003357:CDS
TCTTACAATGCTCAATTCCT+AGG	0.460457	2.3:-58861915	MS.gene003357:CDS
TGGGCTATTAGAGGTGGTGG+AGG	0.463852	2.3:-58862158	MS.gene003357:CDS
TGGACATGTGAATCGGTTAA+GGG	0.464063	2.3:+58862587	None:intergenic
TTGTTTGCAGCACTAGCAGC+TGG	0.472836	2.3:+58861960	None:intergenic
ATGATGAGAAAATATGGTCT+TGG	0.474676	2.3:-58862263	MS.gene003357:CDS
AGAGAGCCGATACCGGAAAC+CGG	0.475333	2.3:-58861696	MS.gene003357:CDS
TAAAGTGTTCCATTTCTATG+AGG	0.485254	2.3:+58861567	None:intergenic
TTGATGATTTGGAATCCATA+TGG	0.487109	2.3:-58861630	MS.gene003357:CDS
GTTACTTGTTCAAAGAAACT+TGG	0.495838	2.3:-58862557	MS.gene003357:CDS
AAACTTGTGCAAAGACCAGC+AGG	0.496208	2.3:+58862326	None:intergenic
GCGAAAATAGTTGACGCAAA+CGG	0.496323	2.3:-58862221	MS.gene003357:CDS
AAAATTGCCAAGTATGAACT+TGG	0.499229	2.3:+58862821	None:intergenic
AAGATTGCATGGAAACTAGC+TGG	0.499960	2.3:-58861830	MS.gene003357:CDS
TGCACAAGTTTAGGTGTTGG+TGG	0.501953	2.3:-58862314	MS.gene003357:CDS
TAGTTCACATATGCTTCCCT+TGG	0.502365	2.3:+58861435	None:intergenic
TTCCATTTCTATGAGGAAAA+GGG	0.503219	2.3:+58861574	None:intergenic
AAGACAAGAAATGCAAGAGA+TGG	0.506067	2.3:-58861224	MS.gene003357:CDS
CTGAATAGAAGCTTAGACAT+TGG	0.507164	2.3:+58862741	None:intergenic
GAAACTCCTTCAAGTTATGA+AGG	0.509883	2.3:-58861883	MS.gene003357:CDS
ATTCTTGATAGAAAATCTAT+GGG	0.512123	2.3:-58862194	MS.gene003357:CDS
TTTCGTAAGAGAGCCGATAC+CGG	0.516871	2.3:-58861703	MS.gene003357:CDS
AGCTACTTGGACATGTGAAT+CGG	0.521216	2.3:+58862580	None:intergenic
ACGAGAGTCCTTCATAATCA+TGG	0.524388	2.3:+58862507	None:intergenic
TTTGACTAAACAAGATTGCA+TGG	0.524509	2.3:-58861841	MS.gene003357:CDS
GGTGAAAATTAAGACTAAAG+TGG	0.529045	2.3:-58861313	MS.gene003357:CDS
CTTTGCACAAGTTTAGGTGT+TGG	0.529715	2.3:-58862317	MS.gene003357:CDS
CTTATGTGTCTAAGTTTCCA+AGG	0.535444	2.3:-58861452	MS.gene003357:CDS
ATATCGAAGATAATAGCGCT+TGG	0.537173	2.3:-58862418	MS.gene003357:CDS
GTTTACAAGGATTATGGCAA+AGG	0.546077	2.3:-58861674	MS.gene003357:CDS
CCTTCAAGCAAAACTTCAGG+TGG	0.556110	2.3:+58861765	None:intergenic
AGACAAGAAATGCAAGAGAT+GGG	0.558462	2.3:-58861223	MS.gene003357:CDS
ATTCAAGCCGGTGCTACTAT+CGG	0.565892	2.3:-58862395	MS.gene003357:CDS
TTACATTGCGAAGTTTGGCT+AGG	0.566780	2.3:+58862447	None:intergenic
TTTATACAAGCATCTTCTTG+GGG	0.579151	2.3:-58861369	MS.gene003357:CDS
CACTTCGCCGATAGTAGCAC+CGG	0.580226	2.3:+58862388	None:intergenic
CATCTAAGAGTTAGAAGTGG+TGG	0.586392	2.3:-58862530	MS.gene003357:CDS
TATGGATTCCAAATCATCAA+AGG	0.588783	2.3:+58861633	None:intergenic
AGTGGTGGCCATGATTATGA+AGG	0.592283	2.3:-58862515	MS.gene003357:CDS
TTATGTGTCTAAGTTTCCAA+GGG	0.614808	2.3:-58861451	MS.gene003357:CDS
GCTAGGTCGACGATTATGAA+AGG	0.615520	2.3:+58862464	None:intergenic
TGCATAGTTGAAACTGGAAG+TGG	0.634647	2.3:+58861252	None:intergenic
GGAGTTTCTCCGAATCACCT+AGG	0.652162	2.3:+58861898	None:intergenic
ATGATTTGGAATCCATATGG+TGG	0.656424	2.3:-58861627	MS.gene003357:CDS
AATAGCGCTTGGATTCAAGC+CGG	0.660237	2.3:-58862407	MS.gene003357:CDS
ATTCATCTAAGAGTTAGAAG+TGG	0.668072	2.3:-58862533	MS.gene003357:CDS
TTCTTGATAGAAAATCTATG+GGG	0.690602	2.3:-58862193	MS.gene003357:CDS
TGGAAACTTAGACACATAAG+GGG	0.690609	2.3:+58861455	None:intergenic
ATAGTTGAAACTGGAAGTGG+TGG	0.697983	2.3:+58861255	None:intergenic
TCTTGATAGAAAATCTATGG+GGG	0.706423	2.3:-58862192	MS.gene003357:CDS
GTTGGTGGACACATAACAGG+AGG	0.719255	2.3:-58862299	MS.gene003357:CDS
AACTTGTGCAAAGACCAGCA+GGG	0.736490	2.3:+58862327	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTTCAAAGATAATTTCAAT+AGG	-	chr2.3:58862713-58862732	MS.gene003357:CDS	15.0%
!!	AAATTCAGTATTTAACTCTT+TGG	-	chr2.3:58862509-58862528	MS.gene003357:CDS	20.0%
!!	ATTCTTGATAGAAAATCTAT+GGG	-	chr2.3:58861857-58861876	MS.gene003357:CDS	20.0%
!!	TATTCTTGATAGAAAATCTA+TGG	-	chr2.3:58861856-58861875	MS.gene003357:CDS	20.0%
!	AACTATAGAGATCTTGATTT+GGG	-	chr2.3:58862634-58862653	MS.gene003357:CDS	25.0%
!	AATATTTACATTGCGAAGTT+TGG	+	chr2.3:58861612-58861631	None:intergenic	25.0%
!	CAAAGATAATTTCAATAGGT+TGG	-	chr2.3:58862717-58862736	MS.gene003357:CDS	25.0%
!	GTGTAAATTGATGCATAAAA+TGG	+	chr2.3:58861347-58861366	None:intergenic	25.0%
!	TTCTTGATAGAAAATCTATG+GGG	-	chr2.3:58861858-58861877	MS.gene003357:CDS	25.0%
!!	AAGAGATTTTCATCAATAGT+TGG	+	chr2.3:58862052-58862071	None:intergenic	25.0%
!!!	GTGAATATAAATTCAGGTTT+TGG	+	chr2.3:58861443-58861462	None:intergenic	25.0%
	AAAATTGCCAAGTATGAACT+TGG	+	chr2.3:58861233-58861252	None:intergenic	30.0%
	AAATCTGTTCTGTATATTGC+AGG	-	chr2.3:58862247-58862266	MS.gene003357:CDS	30.0%
	AACTTTCCTTCATAACTTGA+AGG	+	chr2.3:58862177-58862196	None:intergenic	30.0%
	ATCATTACCAAGTTCATACT+TGG	-	chr2.3:58861223-58861242	MS.gene003357:CDS	30.0%
	ATGATGAGAAAATATGGTCT+TGG	-	chr2.3:58861788-58861807	MS.gene003357:CDS	30.0%
	ATTCATCTAAGAGTTAGAAG+TGG	-	chr2.3:58861518-58861537	MS.gene003357:CDS	30.0%
	ATTCTTCAGCACAAAATCTA+AGG	-	chr2.3:58861399-58861418	MS.gene003357:CDS	30.0%
	CAAGCAAGATTGTTCATAAA+TGG	-	chr2.3:58862014-58862033	MS.gene003357:CDS	30.0%
	CTTTATACAAGCATCTTCTT+GGG	-	chr2.3:58862681-58862700	MS.gene003357:CDS	30.0%
	GAACTATAGAGATCTTGATT+TGG	-	chr2.3:58862633-58862652	MS.gene003357:CDS	30.0%
	GGTGAAAATTAAGACTAAAG+TGG	-	chr2.3:58862738-58862757	MS.gene003357:CDS	30.0%
	GTTACTTGTTCAAAGAAACT+TGG	-	chr2.3:58861494-58861513	MS.gene003357:CDS	30.0%
	TATGGATTCCAAATCATCAA+AGG	+	chr2.3:58862421-58862440	None:intergenic	30.0%
	TATTTAACTCTTTGGCAAGA+TGG	-	chr2.3:58862517-58862536	MS.gene003357:CDS	30.0%
	TCTTGATAGAAAATCTATGG+GGG	-	chr2.3:58861859-58861878	MS.gene003357:CDS	30.0%
	TGTTTAGTCAAACCTAATTC+AGG	+	chr2.3:58862202-58862221	None:intergenic	30.0%
	TTATGTGTCTAAGTTTCCAA+GGG	-	chr2.3:58862600-58862619	MS.gene003357:CDS	30.0%
	TTCCATTTCTATGAGGAAAA+GGG	+	chr2.3:58862480-58862499	None:intergenic	30.0%
	TTGGAAACTTAGACACATAA+GGG	+	chr2.3:58862600-58862619	None:intergenic	30.0%
	TTTAGTTGCATAGTTGAAAC+TGG	+	chr2.3:58862808-58862827	None:intergenic	30.0%
	TTTATACAAGCATCTTCTTG+GGG	-	chr2.3:58862682-58862701	MS.gene003357:CDS	30.0%
	TTTGACTAAACAAGATTGCA+TGG	-	chr2.3:58862210-58862229	MS.gene003357:CDS	30.0%
!	AAGACCATATTTTCTCATCA+TGG	+	chr2.3:58861789-58861808	None:intergenic	30.0%
!	AAGATAGTCCTTTGATGATT+TGG	-	chr2.3:58862410-58862429	MS.gene003357:CDS	30.0%
!	AAGGAAAGTTTTCCTGAATT+AGG	-	chr2.3:58862187-58862206	MS.gene003357:CDS	30.0%
!	AAGGGTGTGAATATAAATTC+AGG	+	chr2.3:58861449-58861468	None:intergenic	30.0%
!	AGCACAAAATCTAAGGTATT+TGG	-	chr2.3:58861406-58861425	MS.gene003357:CDS	30.0%
!	GATTTTGTGCTGAAGAATTA+AGG	+	chr2.3:58861397-58861416	None:intergenic	30.0%
!	TAAAGTGTTCCATTTCTATG+AGG	+	chr2.3:58862487-58862506	None:intergenic	30.0%
!	TGGCATGATGAACAATTTTT+CGG	-	chr2.3:58862444-58862463	MS.gene003357:CDS	30.0%
!	TTGATGATTTGGAATCCATA+TGG	-	chr2.3:58862421-58862440	MS.gene003357:CDS	30.0%
!!	GAAGTTTTGGTATTCTTCTT+TGG	-	chr2.3:58861918-58861937	MS.gene003357:CDS	30.0%
!!	TTGTTCTAAGCTTTTGGTAA+CGG	+	chr2.3:58861990-58862009	None:intergenic	30.0%
	AAGACAAGAAATGCAAGAGA+TGG	-	chr2.3:58862827-58862846	MS.gene003357:CDS	35.0%
	AGACAAGAAATGCAAGAGAT+GGG	-	chr2.3:58862828-58862847	MS.gene003357:CDS	35.0%
	ATATCGAAGATAATAGCGCT+TGG	-	chr2.3:58861633-58861652	MS.gene003357:CDS	35.0%
	ATGCATCAAAGCATGTTGAT+TGG	-	chr2.3:58862548-58862567	MS.gene003357:CDS	35.0%
	CATGAGAAAAGTGATGTTCA+TGG	-	chr2.3:58861698-58861717	MS.gene003357:CDS	35.0%
	CTGAATAGAAGCTTAGACAT+TGG	+	chr2.3:58861313-58861332	None:intergenic	35.0%
	CTTATGTGTCTAAGTTTCCA+AGG	-	chr2.3:58862599-58862618	MS.gene003357:CDS	35.0%
	CTTGGAAACTTAGACACATA+AGG	+	chr2.3:58862601-58862620	None:intergenic	35.0%
	GCTTTATACAAGCATCTTCT+TGG	-	chr2.3:58862680-58862699	MS.gene003357:CDS	35.0%
	GGATCCATGATGAGAAAATA+TGG	-	chr2.3:58861782-58861801	MS.gene003357:CDS	35.0%
	GTTCCATTTCTATGAGGAAA+AGG	+	chr2.3:58862481-58862500	None:intergenic	35.0%
	GTTTACAAGGATTATGGCAA+AGG	-	chr2.3:58862377-58862396	MS.gene003357:CDS	35.0%
	TCTTACAATGCTCAATTCCT+AGG	-	chr2.3:58862136-58862155	MS.gene003357:CDS	35.0%
	TGGAAACTTAGACACATAAG+GGG	+	chr2.3:58862599-58862618	None:intergenic	35.0%
	TTGAACAAGTAACAGCTACT+TGG	+	chr2.3:58861487-58861506	None:intergenic	35.0%
	TTGCCATAATCCTTGTAAAC+CGG	+	chr2.3:58862377-58862396	None:intergenic	35.0%
	TTTCCTTCAAGCAAAACTTC+AGG	+	chr2.3:58862292-58862311	None:intergenic	35.0%
!	AAACCGGTTTACAAGGATTA+TGG	-	chr2.3:58862371-58862390	MS.gene003357:CDS	35.0%
!	ATCCCTTTTCCTCATAGAAA+TGG	-	chr2.3:58862475-58862494	MS.gene003357:CDS	35.0%
!	ATGATTTGGAATCCATATGG+TGG	-	chr2.3:58862424-58862443	MS.gene003357:CDS	35.0%
!	GAAACTCCTTCAAGTTATGA+AGG	-	chr2.3:58862168-58862187	MS.gene003357:CDS	35.0%
!	GAATTCTTTTGGGCTATTAG+AGG	-	chr2.3:58861884-58861903	MS.gene003357:CDS	35.0%
!!	GTTTTGGTATTCTTCTTTGG+TGG	-	chr2.3:58861921-58861940	MS.gene003357:CDS	35.0%
!!	TGCATCTTGTTCTAAGCTTT+TGG	+	chr2.3:58861996-58862015	None:intergenic	35.0%
	AAGATTGCATGGAAACTAGC+TGG	-	chr2.3:58862221-58862240	MS.gene003357:CDS	40.0%
	ACGAGAGTCCTTCATAATCA+TGG	+	chr2.3:58861547-58861566	None:intergenic	40.0%
	ACTTCAGGTGGTGTATCATT+TGG	+	chr2.3:58862277-58862296	None:intergenic	40.0%
	AGCTACTTGGACATGTGAAT+CGG	+	chr2.3:58861474-58861493	None:intergenic	40.0%
	AGGATTATGGCAAAGGTTGT+TGG	-	chr2.3:58862384-58862403	MS.gene003357:CDS	40.0%
	ATAGTTGAAACTGGAAGTGG+TGG	+	chr2.3:58862799-58862818	None:intergenic	40.0%
	CATCTAAGAGTTAGAAGTGG+TGG	-	chr2.3:58861521-58861540	MS.gene003357:CDS	40.0%
	CTATCGGCGAAGTGTATTAT+AGG	-	chr2.3:58861672-58861691	MS.gene003357:CDS	40.0%
	CTTTGCACAAGTTTAGGTGT+TGG	-	chr2.3:58861734-58861753	MS.gene003357:CDS	40.0%
	GCGAAAATAGTTGACGCAAA+CGG	-	chr2.3:58861830-58861849	MS.gene003357:CDS	40.0%
	TAGTTCACATATGCTTCCCT+TGG	+	chr2.3:58862619-58862638	None:intergenic	40.0%
	TGATAGAAAATCTATGGGGG+AGG	-	chr2.3:58861862-58861881	MS.gene003357:CDS	40.0%
	TGCATAGTTGAAACTGGAAG+TGG	+	chr2.3:58862802-58862821	None:intergenic	40.0%
	TGCTCAATTCCTAGGTGATT+CGG	-	chr2.3:58862144-58862163	MS.gene003357:CDS	40.0%
	TGGACATGTGAATCGGTTAA+GGG	+	chr2.3:58861467-58861486	None:intergenic	40.0%
	TGGATCCTGAAAATGTGTTC+AGG	-	chr2.3:58862758-58862777	MS.gene003357:CDS	40.0%
	TTACATTGCGAAGTTTGGCT+AGG	+	chr2.3:58861607-58861626	None:intergenic	40.0%
	TTGGACATGTGAATCGGTTA+AGG	+	chr2.3:58861468-58861487	None:intergenic	40.0%
	TTGTTCATCATGCCACCATA+TGG	+	chr2.3:58862439-58862458	None:intergenic	40.0%
!	AATCCTTGTAAACCGGTTTC+CGG	+	chr2.3:58862370-58862389	None:intergenic	40.0%
!	CAAAGCATGTTGATTGGATC+AGG	-	chr2.3:58862554-58862573	MS.gene003357:CDS	40.0%
!	GTAAAAACCGTCACGGTTTT+TGG	+	chr2.3:58861968-58861987	None:intergenic	40.0%
!	TATGGGGGAGGAATTCTTTT+GGG	-	chr2.3:58861874-58861893	MS.gene003357:CDS	40.0%
!	TCATGCCTGAACACATTTTC+AGG	+	chr2.3:58862766-58862785	None:intergenic	40.0%
!	TTCTTTTGGGCTATTAGAGG+TGG	-	chr2.3:58861887-58861906	MS.gene003357:CDS	40.0%
!!!	AATTCAGGTTTTGGAGCTGA+AGG	+	chr2.3:58861434-58861453	None:intergenic	40.0%
	AAACTTGTGCAAAGACCAGC+AGG	+	chr2.3:58861728-58861747	None:intergenic	45.0%
	AACTTGTGCAAAGACCAGCA+GGG	+	chr2.3:58861727-58861746	None:intergenic	45.0%
	AATAGCGCTTGGATTCAAGC+CGG	-	chr2.3:58861644-58861663	MS.gene003357:CDS	45.0%
	AGTGGTGGCCATGATTATGA+AGG	-	chr2.3:58861536-58861555	MS.gene003357:CDS	45.0%
	CCTTCAAGCAAAACTTCAGG+TGG	+	chr2.3:58862289-58862308	None:intergenic	45.0%
	GCTAGGTCGACGATTATGAA+AGG	+	chr2.3:58861590-58861609	None:intergenic	45.0%
	TCCTGTTCCAAAAACCGTGA+CGG	-	chr2.3:58861958-58861977	MS.gene003357:CDS	45.0%
	TTTCGTAAGAGAGCCGATAC+CGG	-	chr2.3:58862348-58862367	MS.gene003357:CDS	45.0%
!	ATACCGGAAACCGGTTTACA+AGG	-	chr2.3:58862364-58862383	MS.gene003357:CDS	45.0%
!	CACATAACAGGAGGTGCATA+TGG	-	chr2.3:58861761-58861780	MS.gene003357:CDS	45.0%
!	CCACCTGAAGTTTTGCTTGA+AGG	-	chr2.3:58862286-58862305	MS.gene003357:CDS	45.0%
!	CTATGGGGGAGGAATTCTTT+TGG	-	chr2.3:58861873-58861892	MS.gene003357:CDS	45.0%
!	GGTAACGGTAAAAACCGTCA+CGG	+	chr2.3:58861975-58861994	None:intergenic	45.0%
!	TGTAAACCGGTTTCCGGTAT+CGG	+	chr2.3:58862364-58862383	None:intergenic	45.0%
!	TTTTGGGCTATTAGAGGTGG+TGG	-	chr2.3:58861890-58861909	MS.gene003357:CDS	45.0%
!!	ATTCAAGCCGGTGCTACTAT+CGG	-	chr2.3:58861656-58861675	MS.gene003357:CDS	45.0%
!!	GCTGGTCTTTGCACAAGTTT+AGG	-	chr2.3:58861728-58861747	MS.gene003357:CDS	45.0%
!!	TGCACAAGTTTAGGTGTTGG+TGG	-	chr2.3:58861737-58861756	MS.gene003357:CDS	45.0%
	GATGTTCATGGTTTCCCTGC+TGG	-	chr2.3:58861710-58861729	MS.gene003357:CDS	50.0%
	GGAGTTTCTCCGAATCACCT+AGG	+	chr2.3:58862156-58862175	None:intergenic	50.0%
	TTGTTTGCAGCACTAGCAGC+TGG	+	chr2.3:58862094-58862113	None:intergenic	50.0%
!	GTTGGTGGACACATAACAGG+AGG	-	chr2.3:58861752-58861771	MS.gene003357:CDS	50.0%
!!	GGTGTTGGTGGACACATAAC+AGG	-	chr2.3:58861749-58861768	MS.gene003357:CDS	50.0%
!!!	ACCGTCACGGTTTTTGGAAC+AGG	+	chr2.3:58861962-58861981	None:intergenic	50.0%
	AGAGAGCCGATACCGGAAAC+CGG	-	chr2.3:58862355-58862374	MS.gene003357:CDS	55.0%
	CACTTCGCCGATAGTAGCAC+CGG	+	chr2.3:58861666-58861685	None:intergenic	55.0%
!	TGGGCTATTAGAGGTGGTGG+AGG	-	chr2.3:58861893-58861912	MS.gene003357:CDS	55.0%
!!	GCTATTAGAGGTGGTGGAGG+TGG	-	chr2.3:58861896-58861915	MS.gene003357:CDS	55.0%
!!!	GGTGGTGGAGGTGGAAGTTT+TGG	-	chr2.3:58861905-58861924	MS.gene003357:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.3	gene	58861218	58862855	58861218	ID=MS.gene003357
chr2.3	mRNA	58861218	58862855	58861218	ID=MS.gene003357.t1;Parent=MS.gene003357
chr2.3	exon	58861218	58862855	58861218	ID=MS.gene003357.t1.exon1;Parent=MS.gene003357.t1
chr2.3	CDS	58861218	58862855	58861218	ID=cds.MS.gene003357.t1;Parent=MS.gene003357.t1

Gene Sequence

>MS.gene003357

ATGAAATCATTACCAAGTTCATACTTGGCAATTTTAATTCTCTTGATATCAATTTCATTAACAAAATCAGCTTCAATTGAAGAAAACTTTGTCCAATGTCTAAGCTTCTATTCAGACAAAGCAGCACCATTTTATGCATCAATTTACACACAAAACAATGCTTCATTTAACAACATCCTTAATTCTTCAGCACAAAATCTAAGGTATTTGGTACCTTCAGCTCCAAAACCTGAATTTATATTCACACCCTTAACCGATTCACATGTCCAAGTAGCTGTTACTTGTTCAAAGAAACTTGGTATTCATCTAAGAGTTAGAAGTGGTGGCCATGATTATGAAGGACTCTCGTATGTTTCTGAAATTGAAACGCCTTTCATAATCGTCGACCTAGCCAAACTTCGCAATGTAAATATTGATATCGAAGATAATAGCGCTTGGATTCAAGCCGGTGCTACTATCGGCGAAGTGTATTATAGGATACATGAGAAAAGTGATGTTCATGGTTTCCCTGCTGGTCTTTGCACAAGTTTAGGTGTTGGTGGACACATAACAGGAGGTGCATATGGATCCATGATGAGAAAATATGGTCTTGGAGCTGATAATGTTCTCGATGCGAAAATAGTTGACGCAAACGGCAATATTCTTGATAGAAAATCTATGGGGGAGGAATTCTTTTGGGCTATTAGAGGTGGTGGAGGTGGAAGTTTTGGTATTCTTCTTTGGTGGAAAATTAAGCTTGTTCCTGTTCCAAAAACCGTGACGGTTTTTACCGTTACCAAAAGCTTAGAACAAGATGCAAGCAAGATTGTTCATAAATGGCAAGAAGTAGCACCAACTATTGATGAAAATCTCTTTATGAGAGTTATCATTCAACCAGCTGCTAGTGCTGCAAACAAAACTCAAAGAACTATTACTACTTCTTACAATGCTCAATTCCTAGGTGATTCGGAGAAACTCCTTCAAGTTATGAAGGAAAGTTTTCCTGAATTAGGTTTGACTAAACAAGATTGCATGGAAACTAGCTGGATCAAATCTGTTCTGTATATTGCAGGCTATCCAAATGATACACCACCTGAAGTTTTGCTTGAAGGAAAATCAACATTCAAGAATTACTTCAAAGCAAAGTCAGATTTCGTAAGAGAGCCGATACCGGAAACCGGTTTACAAGGATTATGGCAAAGGTTGTTGGAAGAAGATAGTCCTTTGATGATTTGGAATCCATATGGTGGCATGATGAACAATTTTTCGGAATCTGATATCCCTTTTCCTCATAGAAATGGAACACTTTACAAAATTCAGTATTTAACTCTTTGGCAAGATGGAGACAAGAATGCATCAAAGCATGTTGATTGGATCAGGAAGCTTTATAACTACATGACCCCTTATGTGTCTAAGTTTCCAAGGGAAGCATATGTGAACTATAGAGATCTTGATTTGGGAATGAATAAGAAGAATAGTACAAGCTTTATACAAGCATCTTCTTGGGGTAACATGTATTTCAAAGATAATTTCAATAGGTTGGTGAAAATTAAGACTAAAGTGGATCCTGAAAATGTGTTCAGGCATGAGCAGAGTATTCCACCACTTCCAGTTTCAACTATGCAACTAAAAGACAAGAAATGCAAGAGATGGGAATAA

Protein sequence

>MS.gene003357.t1

MKSLPSSYLAILILLISISLTKSASIEENFVQCLSFYSDKAAPFYASIYTQNNASFNNILNSSAQNLRYLVPSAPKPEFIFTPLTDSHVQVAVTCSKKLGIHLRVRSGGHDYEGLSYVSEIETPFIIVDLAKLRNVNIDIEDNSAWIQAGATIGEVYYRIHEKSDVHGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVLDAKIVDANGNILDRKSMGEEFFWAIRGGGGGSFGILLWWKIKLVPVPKTVTVFTVTKSLEQDASKIVHKWQEVAPTIDENLFMRVIIQPAASAANKTQRTITTSYNAQFLGDSEKLLQVMKESFPELGLTKQDCMETSWIKSVLYIAGYPNDTPPEVLLEGKSTFKNYFKAKSDFVREPIPETGLQGLWQRLLEEDSPLMIWNPYGGMMNNFSESDIPFPHRNGTLYKIQYLTLWQDGDKNASKHVDWIRKLYNYMTPYVSKFPREAYVNYRDLDLGMNKKNSTSFIQASSWGNMYFKDNFNRLVKIKTKVDPENVFRHEQSIPPLPVSTMQLKDKKCKRWE