Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28724.t1 | XP_013457291.1 | 95.2 | 542 | 26 | 0 | 1 | 542 | 1 | 542 | 2.50E-304 | 1053.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28724.t1 | Q8GTB6 | 50.9 | 544 | 254 | 6 | 6 | 541 | 7 | 545 | 5.2e-157 | 555.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28724.t1 | A0A072UNR7 | 95.2 | 542 | 26 | 0 | 1 | 542 | 1 | 542 | 1.8e-304 | 1053.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049710 | MS.gene28724 | 0.804368 | 2.23E-49 | -1.69E-46 |
MS.gene05015 | MS.gene28724 | 0.811376 | 7.22E-51 | -1.69E-46 |
MS.gene050381 | MS.gene28724 | 0.844344 | 8.01E-59 | -1.69E-46 |
MS.gene050883 | MS.gene28724 | 0.849196 | 3.78E-60 | -1.69E-46 |
MS.gene051044 | MS.gene28724 | 0.832723 | 8.03E-56 | -1.69E-46 |
MS.gene05104 | MS.gene28724 | 0.804826 | 1.79E-49 | -1.69E-46 |
MS.gene051127 | MS.gene28724 | 0.859821 | 3.17E-63 | -1.69E-46 |
MS.gene051138 | MS.gene28724 | 0.839775 | 1.30E-57 | -1.69E-46 |
MS.gene053420 | MS.gene28724 | 0.831516 | 1.60E-55 | -1.69E-46 |
MS.gene053488 | MS.gene28724 | 0.808664 | 2.77E-50 | -1.69E-46 |
MS.gene053826 | MS.gene28724 | 0.816237 | 6.13E-52 | -1.69E-46 |
MS.gene054056 | MS.gene28724 | 0.817468 | 3.25E-52 | -1.69E-46 |
MS.gene055124 | MS.gene28724 | 0.86246 | 4.99E-64 | -1.69E-46 |
MS.gene055154 | MS.gene28724 | 0.811534 | 6.67E-51 | -1.69E-46 |
MS.gene055942 | MS.gene28724 | 0.818831 | 1.60E-52 | -1.69E-46 |
MS.gene055959 | MS.gene28724 | 0.811556 | 6.60E-51 | -1.69E-46 |
MS.gene056224 | MS.gene28724 | 0.816614 | 5.05E-52 | -1.69E-46 |
MS.gene056310 | MS.gene28724 | 0.83635 | 9.85E-57 | -1.69E-46 |
MS.gene056311 | MS.gene28724 | 0.829092 | 6.24E-55 | -1.69E-46 |
MS.gene056313 | MS.gene28724 | 0.834612 | 2.71E-56 | -1.69E-46 |
MS.gene056748 | MS.gene28724 | 0.801966 | 7.01E-49 | -1.69E-46 |
MS.gene057549 | MS.gene28724 | 0.812945 | 3.28E-51 | -1.69E-46 |
MS.gene057550 | MS.gene28724 | 0.81228 | 4.59E-51 | -1.69E-46 |
MS.gene058093 | MS.gene28724 | 0.828749 | 7.56E-55 | -1.69E-46 |
MS.gene058099 | MS.gene28724 | 0.870077 | 1.92E-66 | -1.69E-46 |
MS.gene058108 | MS.gene28724 | 0.833346 | 5.62E-56 | -1.69E-46 |
MS.gene058109 | MS.gene28724 | 0.87224 | 3.70E-67 | -1.69E-46 |
MS.gene058111 | MS.gene28724 | 0.836636 | 8.33E-57 | -1.69E-46 |
MS.gene058171 | MS.gene28724 | 0.86732 | 1.49E-65 | -1.69E-46 |
MS.gene058173 | MS.gene28724 | 0.859964 | 2.87E-63 | -1.69E-46 |
MS.gene058175 | MS.gene28724 | 0.867777 | 1.07E-65 | -1.69E-46 |
MS.gene058179 | MS.gene28724 | 0.811312 | 7.46E-51 | -1.69E-46 |
MS.gene058268 | MS.gene28724 | 0.814825 | 1.26E-51 | -1.69E-46 |
MS.gene058269 | MS.gene28724 | 0.806381 | 8.46E-50 | -1.69E-46 |
MS.gene058493 | MS.gene28724 | 0.8152 | 1.04E-51 | -1.69E-46 |
MS.gene058494 | MS.gene28724 | 0.80307 | 4.15E-49 | -1.69E-46 |
MS.gene058628 | MS.gene28724 | 0.829982 | 3.79E-55 | -1.69E-46 |
MS.gene058629 | MS.gene28724 | 0.828893 | 6.98E-55 | -1.69E-46 |
MS.gene058630 | MS.gene28724 | 0.835614 | 1.51E-56 | -1.69E-46 |
MS.gene059037 | MS.gene28724 | 0.82191 | 3.14E-53 | -1.69E-46 |
MS.gene059044 | MS.gene28724 | 0.80504 | 1.62E-49 | -1.69E-46 |
MS.gene059045 | MS.gene28724 | 0.886158 | 4.36E-72 | -1.69E-46 |
MS.gene059223 | MS.gene28724 | 0.815342 | 9.71E-52 | -1.69E-46 |
MS.gene059694 | MS.gene28724 | 0.806574 | 7.70E-50 | -1.69E-46 |
MS.gene059697 | MS.gene28724 | 0.813321 | 2.72E-51 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28724.t1 | MTR_4g094492 | 95.203 | 542 | 26 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1048 |
MS.gene28724.t1 | MTR_4g094488 | 80.220 | 546 | 101 | 3 | 1 | 542 | 1 | 543 | 0.0 | 877 |
MS.gene28724.t1 | MTR_4g094495 | 80.146 | 549 | 99 | 5 | 1 | 542 | 1 | 546 | 0.0 | 877 |
MS.gene28724.t1 | MTR_4g094478 | 78.479 | 539 | 111 | 2 | 1 | 537 | 1 | 536 | 0.0 | 858 |
MS.gene28724.t1 | MTR_4g094480 | 77.206 | 544 | 119 | 2 | 1 | 542 | 1 | 541 | 0.0 | 851 |
MS.gene28724.t1 | MTR_4g094418 | 70.776 | 438 | 120 | 3 | 104 | 536 | 1 | 435 | 0.0 | 651 |
MS.gene28724.t1 | MTR_2g031560 | 51.992 | 527 | 242 | 5 | 13 | 536 | 5 | 523 | 0.0 | 573 |
MS.gene28724.t1 | MTR_2g031390 | 52.239 | 536 | 240 | 8 | 5 | 536 | 6 | 529 | 0.0 | 569 |
MS.gene28724.t1 | MTR_3g009880 | 55.492 | 528 | 221 | 9 | 12 | 536 | 4 | 520 | 0.0 | 561 |
MS.gene28724.t1 | MTR_3g009760 | 54.104 | 536 | 226 | 9 | 6 | 536 | 2 | 522 | 0.0 | 560 |
MS.gene28724.t1 | MTR_3g009820 | 53.458 | 535 | 231 | 8 | 6 | 536 | 2 | 522 | 0.0 | 553 |
MS.gene28724.t1 | MTR_2g031420 | 54.019 | 535 | 231 | 7 | 6 | 536 | 4 | 527 | 0.0 | 552 |
MS.gene28724.t1 | MTR_4g094520 | 51.698 | 530 | 246 | 6 | 10 | 536 | 10 | 532 | 0.0 | 546 |
MS.gene28724.t1 | MTR_2g031460 | 53.618 | 539 | 227 | 7 | 6 | 536 | 4 | 527 | 0.0 | 546 |
MS.gene28724.t1 | MTR_4g094498 | 55.578 | 502 | 215 | 5 | 35 | 536 | 41 | 534 | 0.0 | 545 |
MS.gene28724.t1 | MTR_2g031590 | 51.948 | 539 | 248 | 5 | 2 | 536 | 1 | 532 | 0.0 | 543 |
MS.gene28724.t1 | MTR_4g094518 | 54.191 | 513 | 219 | 8 | 30 | 536 | 28 | 530 | 0.0 | 533 |
MS.gene28724.t1 | MTR_2g031490 | 50.926 | 540 | 252 | 9 | 3 | 536 | 6 | 538 | 2.05e-178 | 514 |
MS.gene28724.t1 | MTR_4g091150 | 51.569 | 510 | 237 | 4 | 31 | 536 | 37 | 540 | 3.93e-176 | 508 |
MS.gene28724.t1 | MTR_2g031510 | 50.195 | 512 | 244 | 6 | 33 | 540 | 40 | 544 | 4.76e-172 | 498 |
MS.gene28724.t1 | MTR_4g057990 | 49.621 | 528 | 256 | 7 | 8 | 535 | 4 | 521 | 3.11e-170 | 492 |
MS.gene28724.t1 | MTR_6g017205 | 48.015 | 529 | 262 | 5 | 10 | 537 | 11 | 527 | 1.67e-168 | 488 |
MS.gene28724.t1 | MTR_4g094515 | 49.254 | 536 | 263 | 5 | 7 | 539 | 624 | 1153 | 2.02e-168 | 508 |
MS.gene28724.t1 | MTR_4g094515 | 50.394 | 508 | 241 | 7 | 32 | 535 | 39 | 539 | 1.35e-166 | 503 |
MS.gene28724.t1 | MTR_4g091200 | 47.736 | 530 | 263 | 5 | 7 | 535 | 9 | 525 | 2.03e-168 | 488 |
MS.gene28724.t1 | MTR_4g088355 | 49.119 | 511 | 255 | 3 | 32 | 541 | 32 | 538 | 1.57e-167 | 486 |
MS.gene28724.t1 | MTR_4g091190 | 48.728 | 511 | 253 | 5 | 32 | 541 | 31 | 533 | 2.18e-164 | 478 |
MS.gene28724.t1 | MTR_4g091170 | 46.983 | 464 | 222 | 3 | 73 | 535 | 101 | 541 | 1.38e-153 | 451 |
MS.gene28724.t1 | MTR_2g023590 | 48.188 | 469 | 235 | 4 | 68 | 535 | 4 | 465 | 1.12e-146 | 430 |
MS.gene28724.t1 | MTR_1g076830 | 43.867 | 481 | 260 | 7 | 57 | 533 | 58 | 532 | 3.14e-126 | 380 |
MS.gene28724.t1 | MTR_2g031600 | 58.130 | 246 | 101 | 1 | 1 | 246 | 1 | 244 | 2.54e-86 | 273 |
MS.gene28724.t1 | MTR_2g031600 | 51.572 | 159 | 74 | 2 | 378 | 536 | 245 | 400 | 4.15e-50 | 177 |
MS.gene28724.t1 | MTR_3g009850 | 59.130 | 230 | 87 | 5 | 308 | 536 | 5 | 228 | 1.02e-84 | 263 |
MS.gene28724.t1 | MTR_2g084370 | 48.649 | 111 | 35 | 2 | 128 | 238 | 1 | 89 | 2.92e-31 | 117 |
MS.gene28724.t1 | MTR_2g084405 | 53.750 | 80 | 37 | 0 | 128 | 207 | 1 | 80 | 4.13e-21 | 89.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28724.t1 | AT5G44400 | 50.093 | 539 | 250 | 9 | 10 | 537 | 7 | 537 | 0.0 | 526 |
MS.gene28724.t1 | AT4G20820 | 49.257 | 538 | 254 | 6 | 2 | 534 | 1 | 524 | 0.0 | 524 |
MS.gene28724.t1 | AT5G44440 | 50.278 | 539 | 250 | 7 | 2 | 534 | 1 | 527 | 0.0 | 522 |
MS.gene28724.t1 | AT5G44440 | 50.278 | 539 | 250 | 7 | 2 | 534 | 71 | 597 | 1.41e-180 | 521 |
MS.gene28724.t1 | AT2G34790 | 48.757 | 523 | 250 | 9 | 21 | 537 | 21 | 531 | 4.02e-179 | 515 |
MS.gene28724.t1 | AT5G44410 | 49.907 | 537 | 246 | 8 | 4 | 534 | 8 | 527 | 4.66e-176 | 508 |
MS.gene28724.t1 | AT5G44390 | 47.048 | 542 | 272 | 9 | 3 | 536 | 6 | 540 | 2.69e-174 | 503 |
MS.gene28724.t1 | AT5G44360 | 48.803 | 543 | 260 | 10 | 1 | 537 | 17 | 547 | 3.01e-174 | 503 |
MS.gene28724.t1 | AT5G44360 | 48.803 | 543 | 260 | 10 | 1 | 537 | 1 | 531 | 3.27e-174 | 503 |
MS.gene28724.t1 | AT1G30760 | 48.837 | 516 | 244 | 9 | 27 | 535 | 29 | 531 | 2.79e-170 | 493 |
MS.gene28724.t1 | AT1G30760 | 48.837 | 516 | 244 | 9 | 27 | 535 | 47 | 549 | 3.80e-170 | 493 |
MS.gene28724.t1 | AT5G44380 | 49.630 | 540 | 260 | 7 | 2 | 536 | 7 | 539 | 1.54e-168 | 488 |
MS.gene28724.t1 | AT5G44380 | 49.630 | 540 | 260 | 7 | 2 | 536 | 47 | 579 | 3.45e-168 | 489 |
MS.gene28724.t1 | AT4G20860 | 49.126 | 515 | 243 | 10 | 30 | 536 | 26 | 529 | 4.83e-168 | 487 |
MS.gene28724.t1 | AT1G30730 | 48.015 | 529 | 261 | 6 | 8 | 534 | 7 | 523 | 6.08e-166 | 481 |
MS.gene28724.t1 | AT1G11770 | 49.016 | 508 | 247 | 7 | 32 | 536 | 31 | 529 | 1.72e-165 | 481 |
MS.gene28724.t1 | AT1G30700 | 47.753 | 534 | 266 | 6 | 8 | 536 | 1 | 526 | 1.12e-164 | 478 |
MS.gene28724.t1 | AT1G26420 | 47.015 | 536 | 266 | 9 | 4 | 534 | 1 | 523 | 9.65e-164 | 476 |
MS.gene28724.t1 | AT1G26380 | 47.378 | 534 | 264 | 8 | 11 | 539 | 7 | 528 | 2.60e-162 | 473 |
MS.gene28724.t1 | AT4G20840 | 46.394 | 513 | 263 | 7 | 31 | 540 | 36 | 539 | 1.97e-159 | 465 |
MS.gene28724.t1 | AT1G30720 | 49.206 | 504 | 246 | 5 | 33 | 534 | 29 | 524 | 2.90e-158 | 462 |
MS.gene28724.t1 | AT1G26400 | 45.269 | 539 | 268 | 9 | 4 | 533 | 1 | 521 | 1.24e-156 | 457 |
MS.gene28724.t1 | AT1G26410 | 47.358 | 511 | 258 | 8 | 26 | 534 | 46 | 547 | 3.38e-156 | 457 |
MS.gene28724.t1 | AT1G34575 | 47.767 | 515 | 248 | 10 | 30 | 539 | 29 | 527 | 4.15e-156 | 456 |
MS.gene28724.t1 | AT1G30710 | 45.996 | 537 | 263 | 11 | 8 | 536 | 11 | 528 | 7.30e-156 | 456 |
MS.gene28724.t1 | AT4G20800 | 46.094 | 512 | 269 | 4 | 23 | 534 | 19 | 523 | 1.32e-155 | 455 |
MS.gene28724.t1 | AT1G26390 | 47.421 | 504 | 258 | 4 | 32 | 534 | 28 | 525 | 7.53e-155 | 453 |
MS.gene28724.t1 | AT4G20830 | 47.104 | 518 | 262 | 7 | 26 | 540 | 32 | 540 | 1.34e-151 | 445 |
MS.gene28724.t1 | AT1G01980 | 46.615 | 517 | 259 | 10 | 31 | 539 | 30 | 537 | 6.48e-151 | 444 |
MS.gene28724.t1 | AT4G20830 | 47.276 | 514 | 259 | 7 | 26 | 536 | 32 | 536 | 8.85e-151 | 444 |
MS.gene28724.t1 | AT1G30740 | 45.996 | 537 | 271 | 10 | 12 | 538 | 6 | 533 | 1.45e-148 | 437 |
MS.gene28724.t1 | AT1G30740 | 45.996 | 537 | 271 | 10 | 12 | 538 | 3 | 530 | 1.55e-148 | 437 |
MS.gene28724.t1 | AT2G34810 | 44.118 | 510 | 278 | 4 | 31 | 536 | 33 | 539 | 5.53e-141 | 418 |
Find 112 sgRNAs with CRISPR-Local
Find 135 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAATCTGGAGGCCATGATTT+TGG | 0.130838 | 4.3:+19437180 | None:intergenic |
AAATTATGGCTGTTTGAATA+TGG | 0.187785 | 4.3:+19437207 | None:intergenic |
GCTACAAGCAAGCTAGTATT+TGG | 0.235073 | 4.3:-19435993 | MS.gene28724:CDS |
CGCCTTTCGGAAATTGAAAA+AGG | 0.237346 | 4.3:+19436433 | None:intergenic |
AAAACTCCTATTCCTGAAAA+TGG | 0.251375 | 4.3:-19436330 | MS.gene28724:CDS |
CAATGGGTGAAGATTTGTTT+TGG | 0.263104 | 4.3:-19436818 | MS.gene28724:CDS |
GGTGGTGGAGGAGCAAGTTT+TGG | 0.291186 | 4.3:-19436786 | MS.gene28724:CDS |
ATATTTCAATCCTTGTTTCT+TGG | 0.298323 | 4.3:-19436558 | MS.gene28724:CDS |
GTTTCAAAGTCTCCAAGAAT+TGG | 0.300797 | 4.3:-19436072 | MS.gene28724:CDS |
TTTGCTTTGTAAATAAATCT+TGG | 0.313472 | 4.3:+19436366 | None:intergenic |
GTTTCCTTATGGTGGAATAA+TGG | 0.315442 | 4.3:-19436247 | MS.gene28724:CDS |
CCTTTGAAAGACAATATTGA+TGG | 0.321417 | 4.3:+19436620 | None:intergenic |
AATCAACCTGGTAATGAATA+TGG | 0.323880 | 4.3:+19436172 | None:intergenic |
ATTCCTGAAAATGGATTAGA+AGG | 0.350473 | 4.3:-19436321 | MS.gene28724:CDS |
CCCCACTACGGGTTCGAATC+TGG | 0.361159 | 4.3:+19437165 | None:intergenic |
TAGTTGATATACCCAATTCT+TGG | 0.362017 | 4.3:+19436060 | None:intergenic |
CATTGATCTCGTAAACTTCA+AGG | 0.362548 | 4.3:-19437093 | MS.gene28724:CDS |
ATATTCATTACCAGGTTGAT+TGG | 0.363341 | 4.3:-19436170 | MS.gene28724:CDS |
TACTGGTGAGTAAGAGGAAT+TGG | 0.365636 | 4.3:+19437313 | None:intergenic |
TTGCTTTGTAAATAAATCTT+GGG | 0.367450 | 4.3:+19436367 | None:intergenic |
ATTAATTTATTTGTGTCCCT+TGG | 0.367735 | 4.3:+19435864 | None:intergenic |
AACTATAGAGACCTTGATAT+TGG | 0.379359 | 4.3:-19436042 | MS.gene28724:CDS |
CAAGAACAACTTCAAAAGAT+TGG | 0.382060 | 4.3:-19435956 | MS.gene28724:CDS |
GGAACCTTAGTGCGTAAATA+TGG | 0.383768 | 4.3:-19436909 | MS.gene28724:CDS |
CCATATCATCATTGCACCTT+TGG | 0.387821 | 4.3:+19436269 | None:intergenic |
CTTGGAGACTTTGAAACAAA+AGG | 0.388823 | 4.3:+19436078 | None:intergenic |
CACTTCAGTGGTGGCGGCTA+TGG | 0.388986 | 4.3:-19436930 | MS.gene28724:CDS |
ATAGACAAATATGAGCTTAG+AGG | 0.392833 | 4.3:+19437470 | None:intergenic |
CTACAAGCAAGCTAGTATTT+GGG | 0.397390 | 4.3:-19435992 | MS.gene28724:CDS |
CCAAAGGTGCAATGATGATA+TGG | 0.399938 | 4.3:-19436269 | MS.gene28724:CDS |
GTAAACACCGTCACAGTTGA+TGG | 0.407633 | 4.3:+19436726 | None:intergenic |
AGATAAACTCATTCCCTTGA+TGG | 0.407746 | 4.3:-19436529 | MS.gene28724:CDS |
AATTATGGCTGTTTGAATAT+GGG | 0.408415 | 4.3:+19437208 | None:intergenic |
TTTCAAAGTCTCCAAGAATT+GGG | 0.412921 | 4.3:-19436071 | MS.gene28724:CDS |
AAAATGGATTAGAAGGAATA+TGG | 0.414702 | 4.3:-19436314 | MS.gene28724:CDS |
TTAATTTATTTGTGTCCCTT+GGG | 0.415606 | 4.3:+19435865 | None:intergenic |
AAAATTGTATTGAAATGAGT+TGG | 0.420053 | 4.3:-19436473 | MS.gene28724:CDS |
ACTTCAGGTAATGCGCCTTT+CGG | 0.422852 | 4.3:+19436420 | None:intergenic |
TTTCAATCCTTGTTTCTTGG+AGG | 0.424294 | 4.3:-19436555 | MS.gene28724:CDS |
ACGAGATCAATGACAACAAA+TGG | 0.429670 | 4.3:+19437104 | None:intergenic |
GTGATGATGACAAGTGGTTT+AGG | 0.431669 | 4.3:+19437245 | None:intergenic |
CGAAATCTTGGTTTCCCAGC+TGG | 0.436829 | 4.3:-19436981 | MS.gene28724:CDS |
ATGATGATATGGTTTCCTTA+TGG | 0.438370 | 4.3:-19436258 | MS.gene28724:CDS |
CAGCTGGGAAACCAAGATTT+CGG | 0.439925 | 4.3:+19436982 | None:intergenic |
ATTCCATTTCCTCATAGAAA+AGG | 0.440912 | 4.3:-19436204 | MS.gene28724:CDS |
GCTGGTGCTTGTCCTACAAT+AGG | 0.442267 | 4.3:-19436963 | MS.gene28724:CDS |
TGAAATGAGTTGGATTGAAT+CGG | 0.452927 | 4.3:-19436463 | MS.gene28724:CDS |
GTTCTGTTAAGCAACACTTC+AGG | 0.454581 | 4.3:+19436405 | None:intergenic |
TTTGAGTACTGGTGAGTAAG+AGG | 0.455507 | 4.3:+19437307 | None:intergenic |
TGAGTAAGAGGAATTGGTTT+TGG | 0.462718 | 4.3:+19437319 | None:intergenic |
TCCAGATTCGAACCCGTAGT+GGG | 0.475163 | 4.3:-19437166 | MS.gene28724:CDS |
TTACCAGGTTGATTGGCAAC+AGG | 0.475690 | 4.3:-19436163 | MS.gene28724:CDS |
ATAATTTGTTCCCAAAATCA+TGG | 0.478899 | 4.3:-19437191 | MS.gene28724:CDS |
AAAGTTTAGAGGATCAACTT+TGG | 0.482938 | 4.3:+19435921 | None:intergenic |
TGTAGAAAGCAAAACTGCTT+GGG | 0.483507 | 4.3:-19437057 | MS.gene28724:CDS |
TGGTCTTTGTTTCATGAAGA+TGG | 0.483871 | 4.3:-19436294 | MS.gene28724:CDS |
TGAGTTGTAAATTTGAGTAC+TGG | 0.484352 | 4.3:+19437296 | None:intergenic |
GAAGAAAAGTTTCCTGAGTT+GGG | 0.486919 | 4.3:-19436507 | MS.gene28724:CDS |
TGTCCACCAACACCTATTGT+AGG | 0.487897 | 4.3:+19436951 | None:intergenic |
AAAACTGCTTGGGTTCAGTC+TGG | 0.489702 | 4.3:-19437047 | MS.gene28724:CDS |
TGGGCTATTAGAGGTGGTGG+AGG | 0.490480 | 4.3:-19436798 | MS.gene28724:CDS |
ATTGGTGTGAATAACATTGA+TGG | 0.497447 | 4.3:-19436024 | MS.gene28724:CDS |
GTTTACTGTTGCAAAAGCAT+TGG | 0.502433 | 4.3:-19436709 | MS.gene28724:CDS |
GTATCCATTATTCCACCATA+AGG | 0.507512 | 4.3:+19436243 | None:intergenic |
ATTGTAGGACAAGCACCAGC+TGG | 0.507999 | 4.3:+19436966 | None:intergenic |
CTTCCTGTTGCCAATCAACC+TGG | 0.513010 | 4.3:+19436160 | None:intergenic |
TGCTCACATTATTGATGTGA+AGG | 0.514863 | 4.3:-19436862 | MS.gene28724:CDS |
TAGACCATATTTACGCACTA+AGG | 0.515862 | 4.3:+19436905 | None:intergenic |
TGTCCCTTGGGCACAAGAGA+AGG | 0.516026 | 4.3:+19435877 | None:intergenic |
ATGTAGAAAGCAAAACTGCT+TGG | 0.516128 | 4.3:-19437058 | MS.gene28724:CDS |
GGAAGAAAAGTTTCCTGAGT+TGG | 0.517366 | 4.3:-19436508 | MS.gene28724:CDS |
ACATTATTGATGTGAAGGGT+AGG | 0.525031 | 4.3:-19436857 | MS.gene28724:CDS |
TCTCTAACCACACCCAACTC+AGG | 0.530976 | 4.3:+19436495 | None:intergenic |
GTTTCTTGACAGAGAAGCAA+TGG | 0.534469 | 4.3:-19436835 | MS.gene28724:CDS |
AATAACTAGAAAGACATTGA+AGG | 0.537999 | 4.3:+19437378 | None:intergenic |
GTTCAGTCTGGTGCAACACT+TGG | 0.538464 | 4.3:-19437035 | MS.gene28724:CDS |
TGTTATTCACACCAATATCA+AGG | 0.539812 | 4.3:+19436031 | None:intergenic |
CTCCAGATTCGAACCCGTAG+TGG | 0.540664 | 4.3:-19437167 | MS.gene28724:CDS |
TTTATACCATATTCATTACC+AGG | 0.548049 | 4.3:-19436178 | MS.gene28724:CDS |
CCATCAATATTGTCTTTCAA+AGG | 0.551890 | 4.3:-19436620 | MS.gene28724:CDS |
AAAGTTTCCTGAGTTGGGTG+TGG | 0.552427 | 4.3:-19436502 | MS.gene28724:CDS |
TATACCTTCTCTTGTGCCCA+AGG | 0.564129 | 4.3:-19435881 | MS.gene28724:CDS |
TTTCTTGACAGAGAAGCAAT+GGG | 0.565816 | 4.3:-19436834 | MS.gene28724:CDS |
TGTTCACAAGTGGCAGTATG+TGG | 0.580228 | 4.3:-19436667 | MS.gene28724:CDS |
ATGATATGGTTTCCTTATGG+TGG | 0.582909 | 4.3:-19436255 | MS.gene28724:CDS |
ATGGCTGTTTGAATATGGGA+AGG | 0.583461 | 4.3:+19437212 | None:intergenic |
CTACAAAGCTTGTTCACAAG+TGG | 0.585250 | 4.3:-19436677 | MS.gene28724:CDS |
ATCTACACCTCCAAGAAACA+AGG | 0.586811 | 4.3:+19436548 | None:intergenic |
AAGTGGTTTAGGTGTTGTGT+AGG | 0.592233 | 4.3:+19437256 | None:intergenic |
TGTCCTACAATAGGTGTTGG+TGG | 0.592774 | 4.3:-19436954 | MS.gene28724:CDS |
CCAGATTCGAACCCGTAGTG+GGG | 0.593132 | 4.3:-19437165 | MS.gene28724:CDS |
GCTTGTCCTACAATAGGTGT+TGG | 0.602006 | 4.3:-19436957 | MS.gene28724:CDS |
TACAAGCAAGCTAGTATTTG+GGG | 0.602138 | 4.3:-19435991 | MS.gene28724:CDS |
TTGTAGGACAAGCACCAGCT+GGG | 0.603228 | 4.3:+19436967 | None:intergenic |
TGAATATGGGAAGGTTCTAG+AGG | 0.607797 | 4.3:+19437221 | None:intergenic |
CAGGTTGATTGGCAACAGGA+AGG | 0.608073 | 4.3:-19436159 | MS.gene28724:CDS |
AGGATAGACCCTCAAAGTCA+TGG | 0.608222 | 4.3:+19437141 | None:intergenic |
CAGATTCGAACCCGTAGTGG+GGG | 0.608743 | 4.3:-19437164 | MS.gene28724:CDS |
GCAACAGGAAGGTGATGAGG+TGG | 0.620727 | 4.3:-19436148 | MS.gene28724:CDS |
GCTCACATTATTGATGTGAA+GGG | 0.621396 | 4.3:-19436861 | MS.gene28724:CDS |
GGTGGACACTTCAGTGGTGG+CGG | 0.622668 | 4.3:-19436936 | MS.gene28724:CDS |
TCAAGTTCCATCAACTGTGA+CGG | 0.625682 | 4.3:-19436733 | MS.gene28724:CDS |
TTTCATGAAGATGGTGCCAA+AGG | 0.627110 | 4.3:-19436285 | MS.gene28724:CDS |
GTTGGTGGACACTTCAGTGG+TGG | 0.638376 | 4.3:-19436939 | MS.gene28724:CDS |
ATACCTTCTCTTGTGCCCAA+GGG | 0.645386 | 4.3:-19435880 | MS.gene28724:CDS |
CACTACGGGTTCGAATCTGG+AGG | 0.666507 | 4.3:+19437168 | None:intergenic |
GGTGTTGGTGGACACTTCAG+TGG | 0.668243 | 4.3:-19436942 | MS.gene28724:CDS |
AGAGGTGTGATGATGACAAG+TGG | 0.700893 | 4.3:+19437239 | None:intergenic |
AGCATCGATCACATTATCCG+CGG | 0.701535 | 4.3:+19436881 | None:intergenic |
AGTGTTGCTTAACAGAACAC+TGG | 0.704218 | 4.3:-19436400 | MS.gene28724:CDS |
TTGGCAACAGGAAGGTGATG+AGG | 0.705230 | 4.3:-19436151 | MS.gene28724:CDS |
GCGTAAATATGGTCTAGCCG+CGG | 0.716514 | 4.3:-19436898 | MS.gene28724:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAGAAAAATTTATAATTACA+TGG | - | chr4.3:19437243-19437262 | MS.gene28724:CDS | 10.0% |
!! | AAAATTGTATTGAAATGAGT+TGG | - | chr4.3:19436873-19436892 | MS.gene28724:CDS | 20.0% |
!! | AGGATAAATTCAAGTAAAAA+AGG | - | chr4.3:19436746-19436765 | MS.gene28724:CDS | 20.0% |
!! | TTGCTTTGTAAATAAATCTT+GGG | + | chr4.3:19436982-19437001 | None:intergenic | 20.0% |
!! | TTTGCTTTGTAAATAAATCT+TGG | + | chr4.3:19436983-19437002 | None:intergenic | 20.0% |
!!! | TATAAATTTCCTTTTCTATG+AGG | + | chr4.3:19437154-19437173 | None:intergenic | 20.0% |
! | AAATTATGGCTGTTTGAATA+TGG | + | chr4.3:19436142-19436161 | None:intergenic | 25.0% |
! | AATAACTAGAAAGACATTGA+AGG | + | chr4.3:19435971-19435990 | None:intergenic | 25.0% |
! | AATTATGGCTGTTTGAATAT+GGG | + | chr4.3:19436141-19436160 | None:intergenic | 25.0% |
! | TTTATACCATATTCATTACC+AGG | - | chr4.3:19437168-19437187 | MS.gene28724:CDS | 25.0% |
!! | ATATTTCAATCCTTGTTTCT+TGG | - | chr4.3:19436788-19436807 | MS.gene28724:CDS | 25.0% |
!! | TCATTTCTGAAAAAGTTTAG+AGG | + | chr4.3:19437439-19437458 | None:intergenic | 25.0% |
!!! | AAAATGGATTAGAAGGAATA+TGG | - | chr4.3:19437032-19437051 | MS.gene28724:CDS | 25.0% |
!!! | AAATGGAACTTTTGAAACAT+AGG | + | chr4.3:19436228-19436247 | None:intergenic | 25.0% |
!!! | ATAATTTGTTCCCAAAATCA+TGG | - | chr4.3:19436155-19436174 | MS.gene28724:CDS | 25.0% |
!!! | ATGATTTTGGGAACAAATTA+TGG | + | chr4.3:19436156-19436175 | None:intergenic | 25.0% |
AAAACTCCTATTCCTGAAAA+TGG | - | chr4.3:19437016-19437035 | MS.gene28724:CDS | 30.0% | |
AAAGTTTAGAGGATCAACTT+TGG | + | chr4.3:19437428-19437447 | None:intergenic | 30.0% | |
AACTATAGAGACCTTGATAT+TGG | - | chr4.3:19437304-19437323 | MS.gene28724:CDS | 30.0% | |
ATAGACAAATATGAGCTTAG+AGG | + | chr4.3:19435879-19435898 | None:intergenic | 30.0% | |
ATGATGATATGGTTTCCTTA+TGG | - | chr4.3:19437088-19437107 | MS.gene28724:CDS | 30.0% | |
ATTCCATTTCCTCATAGAAA+AGG | - | chr4.3:19437142-19437161 | MS.gene28724:CDS | 30.0% | |
ATTGGTGTGAATAACATTGA+TGG | - | chr4.3:19437322-19437341 | MS.gene28724:CDS | 30.0% | |
CAAGAACAACTTCAAAAGAT+TGG | - | chr4.3:19437390-19437409 | MS.gene28724:CDS | 30.0% | |
CCATCAATATTGTCTTTCAA+AGG | - | chr4.3:19436726-19436745 | MS.gene28724:CDS | 30.0% | |
TGAGTTGTAAATTTGAGTAC+TGG | + | chr4.3:19436053-19436072 | None:intergenic | 30.0% | |
TGGAAAAACTGCACATTAAT+TGG | - | chr4.3:19437218-19437237 | MS.gene28724:CDS | 30.0% | |
TGTTATTCACACCAATATCA+AGG | + | chr4.3:19437318-19437337 | None:intergenic | 30.0% | |
TTTCAAAGTCTCCAAGAATT+GGG | - | chr4.3:19437275-19437294 | MS.gene28724:CDS | 30.0% | |
! | AATCAACCTGGTAATGAATA+TGG | + | chr4.3:19437177-19437196 | None:intergenic | 30.0% |
! | ATTCCTTCTAATCCATTTTC+AGG | + | chr4.3:19437031-19437050 | None:intergenic | 30.0% |
! | CCTTTGAAAGACAATATTGA+TGG | + | chr4.3:19436729-19436748 | None:intergenic | 30.0% |
! | TAGTTGATATACCCAATTCT+TGG | + | chr4.3:19437289-19437308 | None:intergenic | 30.0% |
! | TGAAATGAGTTGGATTGAAT+CGG | - | chr4.3:19436883-19436902 | MS.gene28724:CDS | 30.0% |
! | TTTCCTTTTCTATGAGGAAA+TGG | + | chr4.3:19437148-19437167 | None:intergenic | 30.0% |
!! | AATGGGTGAAGATTTGTTTT+GGG | - | chr4.3:19436529-19436548 | MS.gene28724:CDS | 30.0% |
!! | ATATTCATTACCAGGTTGAT+TGG | - | chr4.3:19437176-19437195 | MS.gene28724:CDS | 30.0% |
!! | ATTCCTGAAAATGGATTAGA+AGG | - | chr4.3:19437025-19437044 | MS.gene28724:CDS | 30.0% |
!! | TCTAATCCATTTTCAGGAAT+AGG | + | chr4.3:19437025-19437044 | None:intergenic | 30.0% |
!!! | GTTTTGGAGTCATAATTTCA+TGG | - | chr4.3:19436576-19436595 | MS.gene28724:CDS | 30.0% |
!!! | TACCTTTTTCAATTTCCGAA+AGG | - | chr4.3:19436911-19436930 | MS.gene28724:CDS | 30.0% |
ACATTATTGATGTGAAGGGT+AGG | - | chr4.3:19436489-19436508 | MS.gene28724:CDS | 35.0% | |
ACGAGATCAATGACAACAAA+TGG | + | chr4.3:19436245-19436264 | None:intergenic | 35.0% | |
AGATAAACTCATTCCCTTGA+TGG | - | chr4.3:19436817-19436836 | MS.gene28724:CDS | 35.0% | |
ATGATATGGTTTCCTTATGG+TGG | - | chr4.3:19437091-19437110 | MS.gene28724:CDS | 35.0% | |
ATGTAGAAAGCAAAACTGCT+TGG | - | chr4.3:19436288-19436307 | MS.gene28724:CDS | 35.0% | |
CATTGATCTCGTAAACTTCA+AGG | - | chr4.3:19436253-19436272 | MS.gene28724:CDS | 35.0% | |
CTACAAGCAAGCTAGTATTT+GGG | - | chr4.3:19437354-19437373 | MS.gene28724:CDS | 35.0% | |
GAAGAAAAGTTTCCTGAGTT+GGG | - | chr4.3:19436839-19436858 | MS.gene28724:CDS | 35.0% | |
GCTCACATTATTGATGTGAA+GGG | - | chr4.3:19436485-19436504 | MS.gene28724:CDS | 35.0% | |
GTATCCATTATTCCACCATA+AGG | + | chr4.3:19437106-19437125 | None:intergenic | 35.0% | |
GTTTCAAAGTCTCCAAGAAT+TGG | - | chr4.3:19437274-19437293 | MS.gene28724:CDS | 35.0% | |
TACAAGCAAGCTAGTATTTG+GGG | - | chr4.3:19437355-19437374 | MS.gene28724:CDS | 35.0% | |
TAGACCATATTTACGCACTA+AGG | + | chr4.3:19436444-19436463 | None:intergenic | 35.0% | |
TGCTCACATTATTGATGTGA+AGG | - | chr4.3:19436484-19436503 | MS.gene28724:CDS | 35.0% | |
TGTAGAAAGCAAAACTGCTT+GGG | - | chr4.3:19436289-19436308 | MS.gene28724:CDS | 35.0% | |
TTTCTTGACAGAGAAGCAAT+GGG | - | chr4.3:19436512-19436531 | MS.gene28724:CDS | 35.0% | |
! | AGGAAACTTTTCTTCCATCA+AGG | + | chr4.3:19436834-19436853 | None:intergenic | 35.0% |
! | GGAAACTTTTCTTCCATCAA+GGG | + | chr4.3:19436833-19436852 | None:intergenic | 35.0% |
! | GTTTACTGTTGCAAAAGCAT+TGG | - | chr4.3:19436637-19436656 | MS.gene28724:CDS | 35.0% |
! | GTTTCCTTATGGTGGAATAA+TGG | - | chr4.3:19437099-19437118 | MS.gene28724:CDS | 35.0% |
! | TGGTCTTTGTTTCATGAAGA+TGG | - | chr4.3:19437052-19437071 | MS.gene28724:CDS | 35.0% |
! | TTTCAATCCTTGTTTCTTGG+AGG | - | chr4.3:19436791-19436810 | MS.gene28724:CDS | 35.0% |
!! | CAATGGGTGAAGATTTGTTT+TGG | - | chr4.3:19436528-19436547 | MS.gene28724:CDS | 35.0% |
!! | CTTGGAGACTTTGAAACAAA+AGG | + | chr4.3:19437271-19437290 | None:intergenic | 35.0% |
!! | TGAGTAAGAGGAATTGGTTT+TGG | + | chr4.3:19436030-19436049 | None:intergenic | 35.0% |
!!! | AACCAAGATTTCGGCTTTTT+TGG | + | chr4.3:19436358-19436377 | None:intergenic | 35.0% |
!!! | GATTTGTTTTGGGCTATTAG+AGG | - | chr4.3:19436539-19436558 | MS.gene28724:CDS | 35.0% |
AGCCAAAAAAGCCGAAATCT+TGG | - | chr4.3:19436353-19436372 | MS.gene28724:CDS | 40.0% | |
ATCTACACCTCCAAGAAACA+AGG | + | chr4.3:19436801-19436820 | None:intergenic | 40.0% | |
ATGGCTGTTTGAATATGGGA+AGG | + | chr4.3:19436137-19436156 | None:intergenic | 40.0% | |
CCATATCATCATTGCACCTT+TGG | + | chr4.3:19437080-19437099 | None:intergenic | 40.0% | |
CGCCTTTCGGAAATTGAAAA+AGG | + | chr4.3:19436916-19436935 | None:intergenic | 40.0% | |
GCTACAAGCAAGCTAGTATT+TGG | - | chr4.3:19437353-19437372 | MS.gene28724:CDS | 40.0% | |
GGAACCTTAGTGCGTAAATA+TGG | - | chr4.3:19436437-19436456 | MS.gene28724:CDS | 40.0% | |
GGAAGAAAAGTTTCCTGAGT+TGG | - | chr4.3:19436838-19436857 | MS.gene28724:CDS | 40.0% | |
GTTCTGTTAAGCAACACTTC+AGG | + | chr4.3:19436944-19436963 | None:intergenic | 40.0% | |
GTTTCTTGACAGAGAAGCAA+TGG | - | chr4.3:19436511-19436530 | MS.gene28724:CDS | 40.0% | |
TACTGGTGAGTAAGAGGAAT+TGG | + | chr4.3:19436036-19436055 | None:intergenic | 40.0% | |
TCAAGTTCCATCAACTGTGA+CGG | - | chr4.3:19436613-19436632 | MS.gene28724:CDS | 40.0% | |
! | AAGTGGTTTAGGTGTTGTGT+AGG | + | chr4.3:19436093-19436112 | None:intergenic | 40.0% |
! | AATCTGGAGGCCATGATTTT+GGG | + | chr4.3:19436168-19436187 | None:intergenic | 40.0% |
! | CCAAAGGTGCAATGATGATA+TGG | - | chr4.3:19437077-19437096 | MS.gene28724:CDS | 40.0% |
! | CTACAAAGCTTGTTCACAAG+TGG | - | chr4.3:19436669-19436688 | MS.gene28724:CDS | 40.0% |
! | GTGATGATGACAAGTGGTTT+AGG | + | chr4.3:19436104-19436123 | None:intergenic | 40.0% |
! | TGAATATGGGAAGGTTCTAG+AGG | + | chr4.3:19436128-19436147 | None:intergenic | 40.0% |
! | TTTCATGAAGATGGTGCCAA+AGG | - | chr4.3:19437061-19437080 | MS.gene28724:CDS | 40.0% |
!! | AGTGTTGCTTAACAGAACAC+TGG | - | chr4.3:19436946-19436965 | MS.gene28724:CDS | 40.0% |
!! | TTTGAGTACTGGTGAGTAAG+AGG | + | chr4.3:19436042-19436061 | None:intergenic | 40.0% |
!!! | TTGTTTTGGGCTATTAGAGG+TGG | - | chr4.3:19436542-19436561 | MS.gene28724:CDS | 40.0% |
AAAACTGCTTGGGTTCAGTC+TGG | - | chr4.3:19436299-19436318 | MS.gene28724:CDS | 45.0% | |
ACTTCAGGTAATGCGCCTTT+CGG | + | chr4.3:19436929-19436948 | None:intergenic | 45.0% | |
AGGATAGACCCTCAAAGTCA+TGG | + | chr4.3:19436208-19436227 | None:intergenic | 45.0% | |
ATACCTTCTCTTGTGCCCAA+GGG | - | chr4.3:19437466-19437485 | MS.gene28724:CDS | 45.0% | |
CAGCTGGGAAACCAAGATTT+CGG | + | chr4.3:19436367-19436386 | None:intergenic | 45.0% | |
GCTTGTCCTACAATAGGTGT+TGG | - | chr4.3:19436389-19436408 | MS.gene28724:CDS | 45.0% | |
GTAAACACCGTCACAGTTGA+TGG | + | chr4.3:19436623-19436642 | None:intergenic | 45.0% | |
TATACCTTCTCTTGTGCCCA+AGG | - | chr4.3:19437465-19437484 | MS.gene28724:CDS | 45.0% | |
TGTCCACCAACACCTATTGT+AGG | + | chr4.3:19436398-19436417 | None:intergenic | 45.0% | |
TGTTCACAAGTGGCAGTATG+TGG | - | chr4.3:19436679-19436698 | MS.gene28724:CDS | 45.0% | |
! | AAAGTTTCCTGAGTTGGGTG+TGG | - | chr4.3:19436844-19436863 | MS.gene28724:CDS | 45.0% |
! | AGAGGTGTGATGATGACAAG+TGG | + | chr4.3:19436110-19436129 | None:intergenic | 45.0% |
! | GAATCTGGAGGCCATGATTT+TGG | + | chr4.3:19436169-19436188 | None:intergenic | 45.0% |
! | TTTTGGGCTATTAGAGGTGG+TGG | - | chr4.3:19436545-19436564 | MS.gene28724:CDS | 45.0% |
!! | AGCATCGATCACATTATCCG+CGG | + | chr4.3:19436468-19436487 | None:intergenic | 45.0% |
!! | TGTCCTACAATAGGTGTTGG+TGG | - | chr4.3:19436392-19436411 | MS.gene28724:CDS | 45.0% |
!! | TTACCAGGTTGATTGGCAAC+AGG | - | chr4.3:19437183-19437202 | MS.gene28724:CDS | 45.0% |
ATTGTAGGACAAGCACCAGC+TGG | + | chr4.3:19436383-19436402 | None:intergenic | 50.0% | |
CGAAATCTTGGTTTCCCAGC+TGG | - | chr4.3:19436365-19436384 | MS.gene28724:CDS | 50.0% | |
CTTCCTGTTGCCAATCAACC+TGG | + | chr4.3:19437189-19437208 | None:intergenic | 50.0% | |
GCGTAAATATGGTCTAGCCG+CGG | - | chr4.3:19436448-19436467 | MS.gene28724:CDS | 50.0% | |
GCTGGTGCTTGTCCTACAAT+AGG | - | chr4.3:19436383-19436402 | MS.gene28724:CDS | 50.0% | |
GTTCAGTCTGGTGCAACACT+TGG | - | chr4.3:19436311-19436330 | MS.gene28724:CDS | 50.0% | |
TCCAGATTCGAACCCGTAGT+GGG | - | chr4.3:19436180-19436199 | MS.gene28724:CDS | 50.0% | |
TCTCTAACCACACCCAACTC+AGG | + | chr4.3:19436854-19436873 | None:intergenic | 50.0% | |
TTGGCAACAGGAAGGTGATG+AGG | - | chr4.3:19437195-19437214 | MS.gene28724:CDS | 50.0% | |
TTGTAGGACAAGCACCAGCT+GGG | + | chr4.3:19436382-19436401 | None:intergenic | 50.0% | |
!! | CAGGTTGATTGGCAACAGGA+AGG | - | chr4.3:19437187-19437206 | MS.gene28724:CDS | 50.0% |
AAAGTCATGGCCCCCACTAC+GGG | + | chr4.3:19436195-19436214 | None:intergenic | 55.0% | |
AGTGGGGGCCATGACTTTGA+GGG | - | chr4.3:19436197-19436216 | MS.gene28724:CDS | 55.0% | |
CAAAGTCATGGCCCCCACTA+CGG | + | chr4.3:19436196-19436215 | None:intergenic | 55.0% | |
CACTACGGGTTCGAATCTGG+AGG | + | chr4.3:19436181-19436200 | None:intergenic | 55.0% | |
CAGATTCGAACCCGTAGTGG+GGG | - | chr4.3:19436182-19436201 | MS.gene28724:CDS | 55.0% | |
CCAGATTCGAACCCGTAGTG+GGG | - | chr4.3:19436181-19436200 | MS.gene28724:CDS | 55.0% | |
CTCCAGATTCGAACCCGTAG+TGG | - | chr4.3:19436179-19436198 | MS.gene28724:CDS | 55.0% | |
GCAACAGGAAGGTGATGAGG+TGG | - | chr4.3:19437198-19437217 | MS.gene28724:CDS | 55.0% | |
TAGTGGGGGCCATGACTTTG+AGG | - | chr4.3:19436196-19436215 | MS.gene28724:CDS | 55.0% | |
TGTCCCTTGGGCACAAGAGA+AGG | + | chr4.3:19437472-19437491 | None:intergenic | 55.0% | |
! | GTTGGTGGACACTTCAGTGG+TGG | - | chr4.3:19436407-19436426 | MS.gene28724:CDS | 55.0% |
! | TGGGCTATTAGAGGTGGTGG+AGG | - | chr4.3:19436548-19436567 | MS.gene28724:CDS | 55.0% |
!! | GGTGTTGGTGGACACTTCAG+TGG | - | chr4.3:19436404-19436423 | MS.gene28724:CDS | 55.0% |
!!! | GGTGGTGGAGGAGCAAGTTT+TGG | - | chr4.3:19436560-19436579 | MS.gene28724:CDS | 55.0% |
CCCCACTACGGGTTCGAATC+TGG | + | chr4.3:19436184-19436203 | None:intergenic | 60.0% | |
GGTGGACACTTCAGTGGTGG+CGG | - | chr4.3:19436410-19436429 | MS.gene28724:CDS | 60.0% | |
!! | CACTTCAGTGGTGGCGGCTA+TGG | - | chr4.3:19436416-19436435 | MS.gene28724:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 19435870 | 19437498 | 19435870 | ID=MS.gene28724 |
chr4.3 | mRNA | 19435870 | 19437498 | 19435870 | ID=MS.gene28724.t1;Parent=MS.gene28724 |
chr4.3 | exon | 19435870 | 19437498 | 19435870 | ID=MS.gene28724.t1.exon1;Parent=MS.gene28724.t1 |
chr4.3 | CDS | 19435870 | 19437498 | 19435870 | ID=cds.MS.gene28724.t1;Parent=MS.gene28724.t1 |
Gene Sequence |
Protein sequence |