Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36438.t1 | XP_013457291.1 | 94.8 | 541 | 28 | 0 | 1 | 541 | 2 | 542 | 1.60E-303 | 1051.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36438.t1 | Q8GTB6 | 51.1 | 544 | 253 | 6 | 5 | 540 | 7 | 545 | 3.1e-157 | 556.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36438.t1 | A0A072UNR7 | 94.8 | 541 | 28 | 0 | 1 | 541 | 2 | 542 | 1.2e-303 | 1051.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049259 | MS.gene36438 | 0.802427 | 5.64E-49 | -1.69E-46 |
MS.gene05015 | MS.gene36438 | 0.817062 | 4.01E-52 | -1.69E-46 |
MS.gene050381 | MS.gene36438 | 0.832792 | 7.72E-56 | -1.69E-46 |
MS.gene050883 | MS.gene36438 | 0.847791 | 9.25E-60 | -1.69E-46 |
MS.gene051044 | MS.gene36438 | 0.818788 | 1.63E-52 | -1.69E-46 |
MS.gene051127 | MS.gene36438 | 0.851471 | 8.69E-61 | -1.69E-46 |
MS.gene051138 | MS.gene36438 | 0.831953 | 1.25E-55 | -1.69E-46 |
MS.gene051341 | MS.gene36438 | 0.803578 | 3.26E-49 | -1.69E-46 |
MS.gene052089 | MS.gene36438 | 0.811603 | 6.45E-51 | -1.69E-46 |
MS.gene053420 | MS.gene36438 | 0.821035 | 5.00E-53 | -1.69E-46 |
MS.gene053826 | MS.gene36438 | 0.81542 | 9.33E-52 | -1.69E-46 |
MS.gene054056 | MS.gene36438 | 0.810814 | 9.56E-51 | -1.69E-46 |
MS.gene055124 | MS.gene36438 | 0.854837 | 9.44E-62 | -1.69E-46 |
MS.gene055154 | MS.gene36438 | 0.815037 | 1.14E-51 | -1.69E-46 |
MS.gene055942 | MS.gene36438 | 0.819361 | 1.21E-52 | -1.69E-46 |
MS.gene056224 | MS.gene36438 | 0.811826 | 5.77E-51 | -1.69E-46 |
MS.gene056310 | MS.gene36438 | 0.826738 | 2.30E-54 | -1.69E-46 |
MS.gene056311 | MS.gene36438 | 0.830227 | 3.31E-55 | -1.69E-46 |
MS.gene056313 | MS.gene36438 | 0.807915 | 4.00E-50 | -1.69E-46 |
MS.gene057549 | MS.gene36438 | 0.812301 | 4.54E-51 | -1.69E-46 |
MS.gene058093 | MS.gene36438 | 0.816767 | 4.67E-52 | -1.69E-46 |
MS.gene058099 | MS.gene36438 | 0.862751 | 4.06E-64 | -1.69E-46 |
MS.gene058108 | MS.gene36438 | 0.832919 | 7.18E-56 | -1.69E-46 |
MS.gene058109 | MS.gene36438 | 0.869537 | 2.87E-66 | -1.69E-46 |
MS.gene058111 | MS.gene36438 | 0.847956 | 8.33E-60 | -1.69E-46 |
MS.gene058171 | MS.gene36438 | 0.860488 | 1.99E-63 | -1.69E-46 |
MS.gene058173 | MS.gene36438 | 0.853743 | 1.95E-61 | -1.69E-46 |
MS.gene058175 | MS.gene36438 | 0.861749 | 8.25E-64 | -1.69E-46 |
MS.gene058268 | MS.gene36438 | 0.80385 | 2.86E-49 | -1.69E-46 |
MS.gene058493 | MS.gene36438 | 0.833473 | 5.23E-56 | -1.69E-46 |
MS.gene058494 | MS.gene36438 | 0.818809 | 1.61E-52 | -1.69E-46 |
MS.gene058628 | MS.gene36438 | 0.831993 | 1.22E-55 | -1.69E-46 |
MS.gene058629 | MS.gene36438 | 0.822292 | 2.56E-53 | -1.69E-46 |
MS.gene058630 | MS.gene36438 | 0.835952 | 1.24E-56 | -1.69E-46 |
MS.gene059045 | MS.gene36438 | 0.886991 | 2.11E-72 | -1.69E-46 |
MS.gene059694 | MS.gene36438 | 0.803556 | 3.29E-49 | -1.69E-46 |
MS.gene059697 | MS.gene36438 | 0.806248 | 9.02E-50 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36438.t1 | MTR_4g094492 | 94.824 | 541 | 28 | 0 | 1 | 541 | 2 | 542 | 0.0 | 1043 |
MS.gene36438.t1 | MTR_4g094488 | 79.817 | 545 | 103 | 3 | 1 | 541 | 2 | 543 | 0.0 | 873 |
MS.gene36438.t1 | MTR_4g094495 | 80.109 | 548 | 99 | 5 | 1 | 541 | 2 | 546 | 0.0 | 873 |
MS.gene36438.t1 | MTR_4g094478 | 78.439 | 538 | 111 | 2 | 1 | 536 | 2 | 536 | 0.0 | 855 |
MS.gene36438.t1 | MTR_4g094480 | 77.164 | 543 | 119 | 2 | 1 | 541 | 2 | 541 | 0.0 | 848 |
MS.gene36438.t1 | MTR_4g094418 | 70.776 | 438 | 120 | 3 | 103 | 535 | 1 | 435 | 0.0 | 650 |
MS.gene36438.t1 | MTR_2g031560 | 51.803 | 527 | 243 | 5 | 12 | 535 | 5 | 523 | 0.0 | 573 |
MS.gene36438.t1 | MTR_2g031390 | 52.052 | 536 | 241 | 8 | 4 | 535 | 6 | 529 | 0.0 | 568 |
MS.gene36438.t1 | MTR_3g009880 | 55.303 | 528 | 222 | 9 | 11 | 535 | 4 | 520 | 0.0 | 561 |
MS.gene36438.t1 | MTR_3g009760 | 53.918 | 536 | 227 | 9 | 5 | 535 | 2 | 522 | 0.0 | 559 |
MS.gene36438.t1 | MTR_3g009820 | 53.271 | 535 | 232 | 8 | 5 | 535 | 2 | 522 | 0.0 | 553 |
MS.gene36438.t1 | MTR_2g031420 | 53.832 | 535 | 232 | 7 | 5 | 535 | 4 | 527 | 0.0 | 551 |
MS.gene36438.t1 | MTR_4g094520 | 51.509 | 530 | 247 | 6 | 9 | 535 | 10 | 532 | 0.0 | 546 |
MS.gene36438.t1 | MTR_2g031460 | 53.618 | 539 | 227 | 7 | 5 | 535 | 4 | 527 | 0.0 | 545 |
MS.gene36438.t1 | MTR_4g094498 | 55.578 | 502 | 215 | 5 | 34 | 535 | 41 | 534 | 0.0 | 545 |
MS.gene36438.t1 | MTR_2g031590 | 52.134 | 539 | 247 | 5 | 1 | 535 | 1 | 532 | 0.0 | 543 |
MS.gene36438.t1 | MTR_4g094518 | 53.996 | 513 | 220 | 8 | 29 | 535 | 28 | 530 | 0.0 | 532 |
MS.gene36438.t1 | MTR_2g031490 | 51.111 | 540 | 251 | 9 | 2 | 535 | 6 | 538 | 1.46e-178 | 514 |
MS.gene36438.t1 | MTR_4g091150 | 51.772 | 508 | 239 | 4 | 30 | 535 | 37 | 540 | 2.09e-176 | 508 |
MS.gene36438.t1 | MTR_2g031510 | 50.391 | 512 | 243 | 6 | 32 | 539 | 40 | 544 | 3.90e-172 | 498 |
MS.gene36438.t1 | MTR_4g057990 | 49.811 | 528 | 255 | 7 | 7 | 534 | 4 | 521 | 1.20e-170 | 493 |
MS.gene36438.t1 | MTR_6g017205 | 48.204 | 529 | 261 | 5 | 9 | 536 | 11 | 527 | 1.00e-168 | 489 |
MS.gene36438.t1 | MTR_4g091200 | 47.925 | 530 | 262 | 5 | 6 | 534 | 9 | 525 | 1.10e-168 | 488 |
MS.gene36438.t1 | MTR_4g094515 | 49.440 | 536 | 262 | 5 | 6 | 538 | 624 | 1153 | 1.15e-168 | 508 |
MS.gene36438.t1 | MTR_4g094515 | 50.197 | 508 | 242 | 7 | 31 | 534 | 39 | 539 | 2.13e-166 | 502 |
MS.gene36438.t1 | MTR_4g088355 | 49.315 | 511 | 254 | 3 | 31 | 540 | 32 | 538 | 8.41e-168 | 486 |
MS.gene36438.t1 | MTR_4g091190 | 48.924 | 511 | 252 | 5 | 31 | 540 | 31 | 533 | 1.21e-164 | 478 |
MS.gene36438.t1 | MTR_4g091170 | 46.983 | 464 | 222 | 3 | 72 | 534 | 101 | 541 | 1.27e-153 | 451 |
MS.gene36438.t1 | MTR_2g023590 | 48.401 | 469 | 234 | 4 | 67 | 534 | 4 | 465 | 5.67e-147 | 431 |
MS.gene36438.t1 | MTR_1g076830 | 43.659 | 481 | 261 | 7 | 56 | 532 | 58 | 532 | 5.05e-126 | 380 |
MS.gene36438.t1 | MTR_2g031600 | 58.848 | 243 | 98 | 1 | 3 | 245 | 4 | 244 | 1.76e-86 | 273 |
MS.gene36438.t1 | MTR_2g031600 | 51.572 | 159 | 74 | 2 | 377 | 535 | 245 | 400 | 4.07e-50 | 177 |
MS.gene36438.t1 | MTR_3g009850 | 59.130 | 230 | 87 | 5 | 307 | 535 | 5 | 228 | 8.60e-85 | 263 |
MS.gene36438.t1 | MTR_2g084370 | 47.748 | 111 | 36 | 2 | 127 | 237 | 1 | 89 | 3.77e-31 | 116 |
MS.gene36438.t1 | MTR_2g084405 | 53.750 | 80 | 37 | 0 | 127 | 206 | 1 | 80 | 3.32e-21 | 89.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36438.t1 | AT5G44400 | 49.907 | 539 | 251 | 9 | 9 | 536 | 7 | 537 | 0.0 | 526 |
MS.gene36438.t1 | AT5G44440 | 50.649 | 539 | 248 | 7 | 1 | 533 | 1 | 527 | 0.0 | 525 |
MS.gene36438.t1 | AT5G44440 | 50.649 | 539 | 248 | 7 | 1 | 533 | 71 | 597 | 0.0 | 524 |
MS.gene36438.t1 | AT4G20820 | 49.071 | 538 | 255 | 6 | 1 | 533 | 1 | 524 | 0.0 | 523 |
MS.gene36438.t1 | AT2G34790 | 48.566 | 523 | 251 | 9 | 20 | 536 | 21 | 531 | 5.26e-179 | 515 |
MS.gene36438.t1 | AT5G44410 | 49.907 | 537 | 246 | 8 | 3 | 533 | 8 | 527 | 1.69e-176 | 508 |
MS.gene36438.t1 | AT5G44390 | 46.863 | 542 | 273 | 9 | 2 | 535 | 6 | 540 | 3.80e-174 | 503 |
MS.gene36438.t1 | AT5G44360 | 48.704 | 540 | 259 | 10 | 3 | 536 | 4 | 531 | 8.05e-174 | 501 |
MS.gene36438.t1 | AT5G44360 | 48.704 | 540 | 259 | 10 | 3 | 536 | 20 | 547 | 9.41e-174 | 502 |
MS.gene36438.t1 | AT1G30760 | 48.643 | 516 | 245 | 9 | 26 | 534 | 29 | 531 | 4.60e-170 | 492 |
MS.gene36438.t1 | AT1G30760 | 48.643 | 516 | 245 | 9 | 26 | 534 | 47 | 549 | 5.66e-170 | 493 |
MS.gene36438.t1 | AT5G44380 | 49.444 | 540 | 261 | 7 | 1 | 535 | 7 | 539 | 3.14e-168 | 488 |
MS.gene36438.t1 | AT5G44380 | 49.444 | 540 | 261 | 7 | 1 | 535 | 47 | 579 | 5.08e-168 | 489 |
MS.gene36438.t1 | AT4G20860 | 48.932 | 515 | 244 | 10 | 29 | 535 | 26 | 529 | 6.25e-168 | 486 |
MS.gene36438.t1 | AT1G30730 | 47.826 | 529 | 262 | 6 | 7 | 533 | 7 | 523 | 4.88e-166 | 481 |
MS.gene36438.t1 | AT1G11770 | 48.819 | 508 | 248 | 7 | 31 | 535 | 31 | 529 | 1.89e-165 | 480 |
MS.gene36438.t1 | AT1G30700 | 47.753 | 534 | 266 | 6 | 7 | 535 | 1 | 526 | 1.13e-164 | 478 |
MS.gene36438.t1 | AT1G26420 | 46.828 | 536 | 267 | 9 | 3 | 533 | 1 | 523 | 1.03e-163 | 476 |
MS.gene36438.t1 | AT1G26380 | 47.191 | 534 | 265 | 8 | 10 | 538 | 7 | 528 | 3.34e-162 | 472 |
MS.gene36438.t1 | AT4G20840 | 46.394 | 513 | 263 | 7 | 30 | 539 | 36 | 539 | 1.76e-159 | 465 |
MS.gene36438.t1 | AT1G30720 | 49.008 | 504 | 247 | 5 | 32 | 533 | 29 | 524 | 3.26e-158 | 462 |
MS.gene36438.t1 | AT1G26400 | 45.083 | 539 | 269 | 9 | 3 | 532 | 1 | 521 | 1.79e-156 | 457 |
MS.gene36438.t1 | AT1G34575 | 47.961 | 515 | 247 | 10 | 29 | 538 | 29 | 527 | 1.96e-156 | 457 |
MS.gene36438.t1 | AT1G26410 | 46.979 | 513 | 261 | 8 | 25 | 535 | 46 | 549 | 3.23e-156 | 457 |
MS.gene36438.t1 | AT1G30710 | 45.896 | 536 | 265 | 10 | 7 | 535 | 11 | 528 | 6.26e-156 | 456 |
MS.gene36438.t1 | AT4G20800 | 45.898 | 512 | 270 | 4 | 22 | 533 | 19 | 523 | 1.66e-155 | 455 |
MS.gene36438.t1 | AT1G26390 | 47.222 | 504 | 259 | 4 | 31 | 533 | 28 | 525 | 1.15e-154 | 452 |
MS.gene36438.t1 | AT4G20830 | 46.911 | 518 | 263 | 7 | 25 | 539 | 32 | 540 | 1.36e-151 | 445 |
MS.gene36438.t1 | AT1G01980 | 46.422 | 517 | 260 | 10 | 30 | 538 | 30 | 537 | 6.47e-151 | 443 |
MS.gene36438.t1 | AT4G20830 | 47.082 | 514 | 260 | 7 | 25 | 535 | 32 | 536 | 1.33e-150 | 444 |
MS.gene36438.t1 | AT1G30740 | 45.810 | 537 | 272 | 10 | 11 | 537 | 6 | 533 | 1.88e-148 | 437 |
MS.gene36438.t1 | AT1G30740 | 45.810 | 537 | 272 | 10 | 11 | 537 | 3 | 530 | 1.92e-148 | 437 |
MS.gene36438.t1 | AT2G34810 | 44.510 | 510 | 276 | 4 | 30 | 535 | 33 | 539 | 9.25e-142 | 420 |
Find 112 sgRNAs with CRISPR-Local
Find 135 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAATCTGGAGGCCATGATTT+TGG | 0.130838 | 4.1:+18852900 | None:intergenic |
AAATTATGGCTGTTTGAATA+TGG | 0.187785 | 4.1:+18852927 | None:intergenic |
GCTACAAGCAAGCTAGTATT+TGG | 0.235073 | 4.1:-18851713 | MS.gene36438:CDS |
CGCCTTTCGGAAATTGAAAA+AGG | 0.237346 | 4.1:+18852153 | None:intergenic |
AAAACTCCTATTCCTGAAAA+TGG | 0.251375 | 4.1:-18852050 | MS.gene36438:CDS |
CAATGGGTGAAGATTTGTTT+TGG | 0.263104 | 4.1:-18852538 | MS.gene36438:CDS |
GGTGGCGGAGGAGCAAGTTT+TGG | 0.297604 | 4.1:-18852506 | MS.gene36438:CDS |
ATATTTCAATCCTTGTTTCT+TGG | 0.298323 | 4.1:-18852278 | MS.gene36438:CDS |
GTTTCAAAGTCTCCAAGAAT+TGG | 0.300797 | 4.1:-18851792 | MS.gene36438:CDS |
GTGAGCATCAATTATATTAT+CGG | 0.307370 | 4.1:+18852598 | None:intergenic |
TTTGCTTTGTAAATAAATCT+TGG | 0.313472 | 4.1:+18852086 | None:intergenic |
GTTTCCTTATGGTGGAATAA+TGG | 0.315442 | 4.1:-18851967 | MS.gene36438:CDS |
GGAACCTTGGTTCGTAAATA+TGG | 0.319156 | 4.1:-18852629 | MS.gene36438:CDS |
CCTTTGAAAGACAATATTGA+TGG | 0.321417 | 4.1:+18852340 | None:intergenic |
CATTGATCTTGTAAACTTCA+AGG | 0.323648 | 4.1:-18852813 | MS.gene36438:CDS |
AATCAACCTGGTAATGAATA+TGG | 0.323880 | 4.1:+18851892 | None:intergenic |
ATTCCTGAAAATGGATTAGA+AGG | 0.350473 | 4.1:-18852041 | MS.gene36438:CDS |
CCCCACTACGGGTTCGAATC+TGG | 0.361159 | 4.1:+18852885 | None:intergenic |
TAGTTGATATACCCAATTCT+TGG | 0.362017 | 4.1:+18851780 | None:intergenic |
ATATTCATTACCAGGTTGAT+TGG | 0.363341 | 4.1:-18851890 | MS.gene36438:CDS |
TACTGGTGAGTAAGAGGAAT+TGG | 0.365636 | 4.1:+18853033 | None:intergenic |
TTGCTTTGTAAATAAATCTT+GGG | 0.367450 | 4.1:+18852087 | None:intergenic |
ATTAATTTATTTGTGTCCCT+TGG | 0.367735 | 4.1:+18851584 | None:intergenic |
AACTATAGAGACCTTGATAT+TGG | 0.379359 | 4.1:-18851762 | MS.gene36438:CDS |
CAAGAACAACTTCAAAAGAT+TGG | 0.382060 | 4.1:-18851676 | MS.gene36438:CDS |
CCATATCATCATTGCACCTT+TGG | 0.387821 | 4.1:+18851989 | None:intergenic |
CTTGGAGACTTTGAAACAAA+AGG | 0.388823 | 4.1:+18851798 | None:intergenic |
ATAGACAAATATGAGCTTAG+AGG | 0.392833 | 4.1:+18853190 | None:intergenic |
CAGCTGGGAAACCGAGATTT+CGG | 0.397206 | 4.1:+18852702 | None:intergenic |
CTACAAGCAAGCTAGTATTT+GGG | 0.397390 | 4.1:-18851712 | MS.gene36438:CDS |
CCAAAGGTGCAATGATGATA+TGG | 0.399938 | 4.1:-18851989 | MS.gene36438:CDS |
GTAAACACCGTCACAGTTGA+TGG | 0.407633 | 4.1:+18852446 | None:intergenic |
AGATAAACTCATTCCCTTGA+TGG | 0.407746 | 4.1:-18852249 | MS.gene36438:CDS |
AATTATGGCTGTTTGAATAT+GGG | 0.408415 | 4.1:+18852928 | None:intergenic |
TTTCAAAGTCTCCAAGAATT+GGG | 0.412921 | 4.1:-18851791 | MS.gene36438:CDS |
ACAAGATCAATGACAACAAA+TGG | 0.413992 | 4.1:+18852824 | None:intergenic |
AAAATGGATTAGAAGGAATA+TGG | 0.414702 | 4.1:-18852034 | MS.gene36438:CDS |
TTAATTTATTTGTGTCCCTT+GGG | 0.415606 | 4.1:+18851585 | None:intergenic |
AAAATTGTATTGAAATGAGT+TGG | 0.420053 | 4.1:-18852193 | MS.gene36438:CDS |
ACTTCAGGTAATGCGCCTTT+CGG | 0.422852 | 4.1:+18852140 | None:intergenic |
TTTCAATCCTTGTTTCTTGG+AGG | 0.424294 | 4.1:-18852275 | MS.gene36438:CDS |
GTGATGATGACAAGTGGTTT+AGG | 0.431669 | 4.1:+18852965 | None:intergenic |
ATGATGATATGGTTTCCTTA+TGG | 0.438370 | 4.1:-18851978 | MS.gene36438:CDS |
ATTCCATTTCCTCATAGAAA+AGG | 0.440912 | 4.1:-18851924 | MS.gene36438:CDS |
GCTGGTGCTTGTCCTACAAT+AGG | 0.442267 | 4.1:-18852683 | MS.gene36438:CDS |
TGAAATGAGTTGGATTGAAT+CGG | 0.452927 | 4.1:-18852183 | MS.gene36438:CDS |
GTTCTGTTAAGCAACACTTC+AGG | 0.454581 | 4.1:+18852125 | None:intergenic |
TTTGAGTACTGGTGAGTAAG+AGG | 0.455507 | 4.1:+18853027 | None:intergenic |
CACTTCAGTGGTGGTGGCTA+TGG | 0.458500 | 4.1:-18852650 | MS.gene36438:CDS |
TGAGTAAGAGGAATTGGTTT+TGG | 0.462718 | 4.1:+18853039 | None:intergenic |
TCCAGATTCGAACCCGTAGT+GGG | 0.475163 | 4.1:-18852886 | MS.gene36438:CDS |
TTACCAGGTTGATTGGCAAC+AGG | 0.475690 | 4.1:-18851883 | MS.gene36438:CDS |
ATAATTTGTTCCCAAAATCA+TGG | 0.478899 | 4.1:-18852911 | MS.gene36438:CDS |
AAAGTTTAGAGGATCAACTT+TGG | 0.482938 | 4.1:+18851641 | None:intergenic |
TGTAGAAAGCAAAACTGCTT+GGG | 0.483507 | 4.1:-18852777 | MS.gene36438:CDS |
TGGTCTTTGTTTCATGAAGA+TGG | 0.483871 | 4.1:-18852014 | MS.gene36438:CDS |
TGAGTTGTAAATTTGAGTAC+TGG | 0.484352 | 4.1:+18853016 | None:intergenic |
GAAGAAAAGTTTCCTGAGTT+GGG | 0.486919 | 4.1:-18852227 | MS.gene36438:CDS |
CGAAATCTCGGTTTCCCAGC+TGG | 0.487820 | 4.1:-18852701 | MS.gene36438:CDS |
TGTCCACCAACACCTATTGT+AGG | 0.487897 | 4.1:+18852671 | None:intergenic |
AAAACTGCTTGGGTTCAGTC+TGG | 0.489702 | 4.1:-18852767 | MS.gene36438:CDS |
ATTGGTGTGAATAACATTGA+TGG | 0.497447 | 4.1:-18851744 | MS.gene36438:CDS |
GTTTACTGTTGCAAAAGCAT+TGG | 0.502433 | 4.1:-18852429 | MS.gene36438:CDS |
GTATCCATTATTCCACCATA+AGG | 0.507512 | 4.1:+18851963 | None:intergenic |
ATTGTAGGACAAGCACCAGC+TGG | 0.507999 | 4.1:+18852686 | None:intergenic |
CTTCCTGTTGCCAATCAACC+TGG | 0.513010 | 4.1:+18851880 | None:intergenic |
TGTCCCTTGGGCACAAGAGA+AGG | 0.516026 | 4.1:+18851597 | None:intergenic |
ATGTAGAAAGCAAAACTGCT+TGG | 0.516128 | 4.1:-18852778 | MS.gene36438:CDS |
GGAAGAAAAGTTTCCTGAGT+TGG | 0.517366 | 4.1:-18852228 | MS.gene36438:CDS |
TCTCTAACCACACCCAACTC+AGG | 0.530976 | 4.1:+18852215 | None:intergenic |
AATAACTAGAAAGACATTGA+AGG | 0.537999 | 4.1:+18853098 | None:intergenic |
GTTCAGTCTGGTGCAACACT+TGG | 0.538464 | 4.1:-18852755 | MS.gene36438:CDS |
TGTTATTCACACCAATATCA+AGG | 0.539812 | 4.1:+18851751 | None:intergenic |
CTCCAGATTCGAACCCGTAG+TGG | 0.540664 | 4.1:-18852887 | MS.gene36438:CDS |
TTTATACCATATTCATTACC+AGG | 0.548049 | 4.1:-18851898 | MS.gene36438:CDS |
TTTCTTGACAGACAAGCAAT+GGG | 0.551117 | 4.1:-18852554 | MS.gene36438:CDS |
CCATCAATATTGTCTTTCAA+AGG | 0.551890 | 4.1:-18852340 | MS.gene36438:CDS |
GTTTCTTGACAGACAAGCAA+TGG | 0.552283 | 4.1:-18852555 | MS.gene36438:CDS |
AAAGTTTCCTGAGTTGGGTG+TGG | 0.552427 | 4.1:-18852222 | MS.gene36438:CDS |
TATACCTTCTCTTGTGCCCA+AGG | 0.564129 | 4.1:-18851601 | MS.gene36438:CDS |
GGTGGACACTTCAGTGGTGG+TGG | 0.569924 | 4.1:-18852656 | MS.gene36438:CDS |
TGTTCACAAGTGGCAGTATG+TGG | 0.580228 | 4.1:-18852387 | MS.gene36438:CDS |
ATGATATGGTTTCCTTATGG+TGG | 0.582909 | 4.1:-18851975 | MS.gene36438:CDS |
ATGGCTGTTTGAATATGGGA+AGG | 0.583461 | 4.1:+18852932 | None:intergenic |
TGGGCTATTAGAGGTGGCGG+AGG | 0.585106 | 4.1:-18852518 | MS.gene36438:CDS |
CTACAAAGCTTGTTCACAAG+TGG | 0.585250 | 4.1:-18852397 | MS.gene36438:CDS |
TGCTCACATAATTGATGTGA+AGG | 0.585552 | 4.1:-18852582 | MS.gene36438:CDS |
ATCTACACCTCCAAGAAACA+AGG | 0.586811 | 4.1:+18852268 | None:intergenic |
ACATAATTGATGTGAAGGGT+AGG | 0.589985 | 4.1:-18852577 | MS.gene36438:CDS |
AAGTGGTTTAGGTGTTGTGT+AGG | 0.592233 | 4.1:+18852976 | None:intergenic |
TGTCCTACAATAGGTGTTGG+TGG | 0.592774 | 4.1:-18852674 | MS.gene36438:CDS |
CCAGATTCGAACCCGTAGTG+GGG | 0.593132 | 4.1:-18852885 | MS.gene36438:CDS |
GCTTGTCCTACAATAGGTGT+TGG | 0.602006 | 4.1:-18852677 | MS.gene36438:CDS |
TACAAGCAAGCTAGTATTTG+GGG | 0.602138 | 4.1:-18851711 | MS.gene36438:CDS |
TGGTGGTGGCTATGGAACCT+TGG | 0.603059 | 4.1:-18852642 | MS.gene36438:CDS |
TTGTAGGACAAGCACCAGCT+GGG | 0.603228 | 4.1:+18852687 | None:intergenic |
TGAATATGGGAAGGTTCTAG+AGG | 0.607797 | 4.1:+18852941 | None:intergenic |
CAGGTTGATTGGCAACAGGA+AGG | 0.608073 | 4.1:-18851879 | MS.gene36438:CDS |
AGGATAGACCCTCAAAGTCA+TGG | 0.608222 | 4.1:+18852861 | None:intergenic |
CAGATTCGAACCCGTAGTGG+GGG | 0.608743 | 4.1:-18852884 | MS.gene36438:CDS |
GCAACAGGAAGGTGATGAGG+TGG | 0.620727 | 4.1:-18851868 | MS.gene36438:CDS |
TCAAGTTCCATCAACTGTGA+CGG | 0.625682 | 4.1:-18852453 | MS.gene36438:CDS |
GTTGGTGGACACTTCAGTGG+TGG | 0.625730 | 4.1:-18852659 | MS.gene36438:CDS |
TTTCATGAAGATGGTGCCAA+AGG | 0.627110 | 4.1:-18852005 | MS.gene36438:CDS |
AAGACCATATTTACGAACCA+AGG | 0.633836 | 4.1:+18852625 | None:intergenic |
ATACCTTCTCTTGTGCCCAA+GGG | 0.645386 | 4.1:-18851600 | MS.gene36438:CDS |
CACTACGGGTTCGAATCTGG+AGG | 0.666507 | 4.1:+18852888 | None:intergenic |
GGTGTTGGTGGACACTTCAG+TGG | 0.668243 | 4.1:-18852662 | MS.gene36438:CDS |
GCTCACATAATTGATGTGAA+GGG | 0.694549 | 4.1:-18852581 | MS.gene36438:CDS |
AGAGGTGTGATGATGACAAG+TGG | 0.700893 | 4.1:+18852959 | None:intergenic |
AGTGTTGCTTAACAGAACAC+TGG | 0.704218 | 4.1:-18852120 | MS.gene36438:CDS |
TTGGCAACAGGAAGGTGATG+AGG | 0.705230 | 4.1:-18851871 | MS.gene36438:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAGAAAAATTTATAATTACA+TGG | - | chr4.1:18852960-18852979 | MS.gene36438:CDS | 10.0% |
!! | AAAATTGTATTGAAATGAGT+TGG | - | chr4.1:18852590-18852609 | MS.gene36438:CDS | 20.0% |
!! | AGGATAAATTCAAGTAAAAA+AGG | - | chr4.1:18852463-18852482 | MS.gene36438:CDS | 20.0% |
!! | TTGCTTTGTAAATAAATCTT+GGG | + | chr4.1:18852699-18852718 | None:intergenic | 20.0% |
!! | TTTGCTTTGTAAATAAATCT+TGG | + | chr4.1:18852700-18852719 | None:intergenic | 20.0% |
!!! | TATAAATTTCCTTTTCTATG+AGG | + | chr4.1:18852871-18852890 | None:intergenic | 20.0% |
! | AAATTATGGCTGTTTGAATA+TGG | + | chr4.1:18851859-18851878 | None:intergenic | 25.0% |
! | AATAACTAGAAAGACATTGA+AGG | + | chr4.1:18851688-18851707 | None:intergenic | 25.0% |
! | AATTATGGCTGTTTGAATAT+GGG | + | chr4.1:18851858-18851877 | None:intergenic | 25.0% |
! | GTGAGCATCAATTATATTAT+CGG | + | chr4.1:18852188-18852207 | None:intergenic | 25.0% |
! | TTTATACCATATTCATTACC+AGG | - | chr4.1:18852885-18852904 | MS.gene36438:CDS | 25.0% |
!! | ATATTTCAATCCTTGTTTCT+TGG | - | chr4.1:18852505-18852524 | MS.gene36438:CDS | 25.0% |
!! | TCATTTCTGAAAAAGTTTAG+AGG | + | chr4.1:18853156-18853175 | None:intergenic | 25.0% |
!!! | AAAATGGATTAGAAGGAATA+TGG | - | chr4.1:18852749-18852768 | MS.gene36438:CDS | 25.0% |
!!! | AAATGGAACTTTTGAAACAT+AGG | + | chr4.1:18851945-18851964 | None:intergenic | 25.0% |
!!! | ATAATTTGTTCCCAAAATCA+TGG | - | chr4.1:18851872-18851891 | MS.gene36438:CDS | 25.0% |
!!! | ATGATTTTGGGAACAAATTA+TGG | + | chr4.1:18851873-18851892 | None:intergenic | 25.0% |
AAAACTCCTATTCCTGAAAA+TGG | - | chr4.1:18852733-18852752 | MS.gene36438:CDS | 30.0% | |
AAAGTTTAGAGGATCAACTT+TGG | + | chr4.1:18853145-18853164 | None:intergenic | 30.0% | |
AACTATAGAGACCTTGATAT+TGG | - | chr4.1:18853021-18853040 | MS.gene36438:CDS | 30.0% | |
ACAAGATCAATGACAACAAA+TGG | + | chr4.1:18851962-18851981 | None:intergenic | 30.0% | |
ATAGACAAATATGAGCTTAG+AGG | + | chr4.1:18851596-18851615 | None:intergenic | 30.0% | |
ATGATGATATGGTTTCCTTA+TGG | - | chr4.1:18852805-18852824 | MS.gene36438:CDS | 30.0% | |
ATTCCATTTCCTCATAGAAA+AGG | - | chr4.1:18852859-18852878 | MS.gene36438:CDS | 30.0% | |
ATTGGTGTGAATAACATTGA+TGG | - | chr4.1:18853039-18853058 | MS.gene36438:CDS | 30.0% | |
CAAGAACAACTTCAAAAGAT+TGG | - | chr4.1:18853107-18853126 | MS.gene36438:CDS | 30.0% | |
CATTGATCTTGTAAACTTCA+AGG | - | chr4.1:18851970-18851989 | MS.gene36438:CDS | 30.0% | |
CCATCAATATTGTCTTTCAA+AGG | - | chr4.1:18852443-18852462 | MS.gene36438:CDS | 30.0% | |
TGAGTTGTAAATTTGAGTAC+TGG | + | chr4.1:18851770-18851789 | None:intergenic | 30.0% | |
TGGAAAAACTGCACATTAAT+TGG | - | chr4.1:18852935-18852954 | MS.gene36438:CDS | 30.0% | |
TGTTATTCACACCAATATCA+AGG | + | chr4.1:18853035-18853054 | None:intergenic | 30.0% | |
TTTCAAAGTCTCCAAGAATT+GGG | - | chr4.1:18852992-18853011 | MS.gene36438:CDS | 30.0% | |
! | AATCAACCTGGTAATGAATA+TGG | + | chr4.1:18852894-18852913 | None:intergenic | 30.0% |
! | ATTCCTTCTAATCCATTTTC+AGG | + | chr4.1:18852748-18852767 | None:intergenic | 30.0% |
! | CCTTTGAAAGACAATATTGA+TGG | + | chr4.1:18852446-18852465 | None:intergenic | 30.0% |
! | TAGTTGATATACCCAATTCT+TGG | + | chr4.1:18853006-18853025 | None:intergenic | 30.0% |
! | TGAAATGAGTTGGATTGAAT+CGG | - | chr4.1:18852600-18852619 | MS.gene36438:CDS | 30.0% |
! | TTTCCTTTTCTATGAGGAAA+TGG | + | chr4.1:18852865-18852884 | None:intergenic | 30.0% |
!! | AATGGGTGAAGATTTGTTTT+GGG | - | chr4.1:18852246-18852265 | MS.gene36438:CDS | 30.0% |
!! | ATATTCATTACCAGGTTGAT+TGG | - | chr4.1:18852893-18852912 | MS.gene36438:CDS | 30.0% |
!! | ATTCCTGAAAATGGATTAGA+AGG | - | chr4.1:18852742-18852761 | MS.gene36438:CDS | 30.0% |
!! | TCTAATCCATTTTCAGGAAT+AGG | + | chr4.1:18852742-18852761 | None:intergenic | 30.0% |
!!! | GTTTTGGAGTCATAATTTCA+TGG | - | chr4.1:18852293-18852312 | MS.gene36438:CDS | 30.0% |
!!! | TACCTTTTTCAATTTCCGAA+AGG | - | chr4.1:18852628-18852647 | MS.gene36438:CDS | 30.0% |
AAGACCATATTTACGAACCA+AGG | + | chr4.1:18852161-18852180 | None:intergenic | 35.0% | |
ACATAATTGATGTGAAGGGT+AGG | - | chr4.1:18852206-18852225 | MS.gene36438:CDS | 35.0% | |
AGATAAACTCATTCCCTTGA+TGG | - | chr4.1:18852534-18852553 | MS.gene36438:CDS | 35.0% | |
ATGATATGGTTTCCTTATGG+TGG | - | chr4.1:18852808-18852827 | MS.gene36438:CDS | 35.0% | |
ATGTAGAAAGCAAAACTGCT+TGG | - | chr4.1:18852005-18852024 | MS.gene36438:CDS | 35.0% | |
CTACAAGCAAGCTAGTATTT+GGG | - | chr4.1:18853071-18853090 | MS.gene36438:CDS | 35.0% | |
GAAGAAAAGTTTCCTGAGTT+GGG | - | chr4.1:18852556-18852575 | MS.gene36438:CDS | 35.0% | |
GCTCACATAATTGATGTGAA+GGG | - | chr4.1:18852202-18852221 | MS.gene36438:CDS | 35.0% | |
GTATCCATTATTCCACCATA+AGG | + | chr4.1:18852823-18852842 | None:intergenic | 35.0% | |
GTTTCAAAGTCTCCAAGAAT+TGG | - | chr4.1:18852991-18853010 | MS.gene36438:CDS | 35.0% | |
TACAAGCAAGCTAGTATTTG+GGG | - | chr4.1:18853072-18853091 | MS.gene36438:CDS | 35.0% | |
TGCTCACATAATTGATGTGA+AGG | - | chr4.1:18852201-18852220 | MS.gene36438:CDS | 35.0% | |
TGTAGAAAGCAAAACTGCTT+GGG | - | chr4.1:18852006-18852025 | MS.gene36438:CDS | 35.0% | |
TTTCTTGACAGACAAGCAAT+GGG | - | chr4.1:18852229-18852248 | MS.gene36438:CDS | 35.0% | |
! | AGGAAACTTTTCTTCCATCA+AGG | + | chr4.1:18852551-18852570 | None:intergenic | 35.0% |
! | GGAAACTTTTCTTCCATCAA+GGG | + | chr4.1:18852550-18852569 | None:intergenic | 35.0% |
! | GTTTACTGTTGCAAAAGCAT+TGG | - | chr4.1:18852354-18852373 | MS.gene36438:CDS | 35.0% |
! | GTTTCCTTATGGTGGAATAA+TGG | - | chr4.1:18852816-18852835 | MS.gene36438:CDS | 35.0% |
! | TGGTCTTTGTTTCATGAAGA+TGG | - | chr4.1:18852769-18852788 | MS.gene36438:CDS | 35.0% |
! | TTTCAATCCTTGTTTCTTGG+AGG | - | chr4.1:18852508-18852527 | MS.gene36438:CDS | 35.0% |
!! | CAATGGGTGAAGATTTGTTT+TGG | - | chr4.1:18852245-18852264 | MS.gene36438:CDS | 35.0% |
!! | CTTGGAGACTTTGAAACAAA+AGG | + | chr4.1:18852988-18853007 | None:intergenic | 35.0% |
!! | TGAGTAAGAGGAATTGGTTT+TGG | + | chr4.1:18851747-18851766 | None:intergenic | 35.0% |
!!! | GATTTGTTTTGGGCTATTAG+AGG | - | chr4.1:18852256-18852275 | MS.gene36438:CDS | 35.0% |
AGCCAAAAAAGCCGAAATCT+CGG | - | chr4.1:18852070-18852089 | MS.gene36438:CDS | 40.0% | |
ATCTACACCTCCAAGAAACA+AGG | + | chr4.1:18852518-18852537 | None:intergenic | 40.0% | |
ATGGCTGTTTGAATATGGGA+AGG | + | chr4.1:18851854-18851873 | None:intergenic | 40.0% | |
CCATATCATCATTGCACCTT+TGG | + | chr4.1:18852797-18852816 | None:intergenic | 40.0% | |
CGCCTTTCGGAAATTGAAAA+AGG | + | chr4.1:18852633-18852652 | None:intergenic | 40.0% | |
GCTACAAGCAAGCTAGTATT+TGG | - | chr4.1:18853070-18853089 | MS.gene36438:CDS | 40.0% | |
GGAAGAAAAGTTTCCTGAGT+TGG | - | chr4.1:18852555-18852574 | MS.gene36438:CDS | 40.0% | |
GTTCTGTTAAGCAACACTTC+AGG | + | chr4.1:18852661-18852680 | None:intergenic | 40.0% | |
GTTTCTTGACAGACAAGCAA+TGG | - | chr4.1:18852228-18852247 | MS.gene36438:CDS | 40.0% | |
TACTGGTGAGTAAGAGGAAT+TGG | + | chr4.1:18851753-18851772 | None:intergenic | 40.0% | |
TCAAGTTCCATCAACTGTGA+CGG | - | chr4.1:18852330-18852349 | MS.gene36438:CDS | 40.0% | |
! | AAGTGGTTTAGGTGTTGTGT+AGG | + | chr4.1:18851810-18851829 | None:intergenic | 40.0% |
! | AATCTGGAGGCCATGATTTT+GGG | + | chr4.1:18851885-18851904 | None:intergenic | 40.0% |
! | CCAAAGGTGCAATGATGATA+TGG | - | chr4.1:18852794-18852813 | MS.gene36438:CDS | 40.0% |
! | CTACAAAGCTTGTTCACAAG+TGG | - | chr4.1:18852386-18852405 | MS.gene36438:CDS | 40.0% |
! | GGAACCTTGGTTCGTAAATA+TGG | - | chr4.1:18852154-18852173 | MS.gene36438:CDS | 40.0% |
! | GTGATGATGACAAGTGGTTT+AGG | + | chr4.1:18851821-18851840 | None:intergenic | 40.0% |
! | TGAATATGGGAAGGTTCTAG+AGG | + | chr4.1:18851845-18851864 | None:intergenic | 40.0% |
! | TTTCATGAAGATGGTGCCAA+AGG | - | chr4.1:18852778-18852797 | MS.gene36438:CDS | 40.0% |
!! | AGTGTTGCTTAACAGAACAC+TGG | - | chr4.1:18852663-18852682 | MS.gene36438:CDS | 40.0% |
!! | TTTGAGTACTGGTGAGTAAG+AGG | + | chr4.1:18851759-18851778 | None:intergenic | 40.0% |
!!! | AACCGAGATTTCGGCTTTTT+TGG | + | chr4.1:18852075-18852094 | None:intergenic | 40.0% |
!!! | TTGTTTTGGGCTATTAGAGG+TGG | - | chr4.1:18852259-18852278 | MS.gene36438:CDS | 40.0% |
AAAACTGCTTGGGTTCAGTC+TGG | - | chr4.1:18852016-18852035 | MS.gene36438:CDS | 45.0% | |
ACTTCAGGTAATGCGCCTTT+CGG | + | chr4.1:18852646-18852665 | None:intergenic | 45.0% | |
AGGATAGACCCTCAAAGTCA+TGG | + | chr4.1:18851925-18851944 | None:intergenic | 45.0% | |
ATACCTTCTCTTGTGCCCAA+GGG | - | chr4.1:18853183-18853202 | MS.gene36438:CDS | 45.0% | |
GCTTGTCCTACAATAGGTGT+TGG | - | chr4.1:18852106-18852125 | MS.gene36438:CDS | 45.0% | |
GTAAACACCGTCACAGTTGA+TGG | + | chr4.1:18852340-18852359 | None:intergenic | 45.0% | |
TATACCTTCTCTTGTGCCCA+AGG | - | chr4.1:18853182-18853201 | MS.gene36438:CDS | 45.0% | |
TGTCCACCAACACCTATTGT+AGG | + | chr4.1:18852115-18852134 | None:intergenic | 45.0% | |
TGTTCACAAGTGGCAGTATG+TGG | - | chr4.1:18852396-18852415 | MS.gene36438:CDS | 45.0% | |
! | AAAGTTTCCTGAGTTGGGTG+TGG | - | chr4.1:18852561-18852580 | MS.gene36438:CDS | 45.0% |
! | AGAGGTGTGATGATGACAAG+TGG | + | chr4.1:18851827-18851846 | None:intergenic | 45.0% |
! | GAATCTGGAGGCCATGATTT+TGG | + | chr4.1:18851886-18851905 | None:intergenic | 45.0% |
! | TTTTGGGCTATTAGAGGTGG+CGG | - | chr4.1:18852262-18852281 | MS.gene36438:CDS | 45.0% |
!! | TGTCCTACAATAGGTGTTGG+TGG | - | chr4.1:18852109-18852128 | MS.gene36438:CDS | 45.0% |
!! | TTACCAGGTTGATTGGCAAC+AGG | - | chr4.1:18852900-18852919 | MS.gene36438:CDS | 45.0% |
ATTGTAGGACAAGCACCAGC+TGG | + | chr4.1:18852100-18852119 | None:intergenic | 50.0% | |
CAGCTGGGAAACCGAGATTT+CGG | + | chr4.1:18852084-18852103 | None:intergenic | 50.0% | |
CTTCCTGTTGCCAATCAACC+TGG | + | chr4.1:18852906-18852925 | None:intergenic | 50.0% | |
GCTGGTGCTTGTCCTACAAT+AGG | - | chr4.1:18852100-18852119 | MS.gene36438:CDS | 50.0% | |
GTTCAGTCTGGTGCAACACT+TGG | - | chr4.1:18852028-18852047 | MS.gene36438:CDS | 50.0% | |
TCCAGATTCGAACCCGTAGT+GGG | - | chr4.1:18851897-18851916 | MS.gene36438:CDS | 50.0% | |
TCTCTAACCACACCCAACTC+AGG | + | chr4.1:18852571-18852590 | None:intergenic | 50.0% | |
TTGGCAACAGGAAGGTGATG+AGG | - | chr4.1:18852912-18852931 | MS.gene36438:CDS | 50.0% | |
TTGTAGGACAAGCACCAGCT+GGG | + | chr4.1:18852099-18852118 | None:intergenic | 50.0% | |
!! | CAGGTTGATTGGCAACAGGA+AGG | - | chr4.1:18852904-18852923 | MS.gene36438:CDS | 50.0% |
AAAGTCATGGCCCCCACTAC+GGG | + | chr4.1:18851912-18851931 | None:intergenic | 55.0% | |
AGTGGGGGCCATGACTTTGA+GGG | - | chr4.1:18851914-18851933 | MS.gene36438:CDS | 55.0% | |
CAAAGTCATGGCCCCCACTA+CGG | + | chr4.1:18851913-18851932 | None:intergenic | 55.0% | |
CACTACGGGTTCGAATCTGG+AGG | + | chr4.1:18851898-18851917 | None:intergenic | 55.0% | |
CAGATTCGAACCCGTAGTGG+GGG | - | chr4.1:18851899-18851918 | MS.gene36438:CDS | 55.0% | |
CCAGATTCGAACCCGTAGTG+GGG | - | chr4.1:18851898-18851917 | MS.gene36438:CDS | 55.0% | |
CGAAATCTCGGTTTCCCAGC+TGG | - | chr4.1:18852082-18852101 | MS.gene36438:CDS | 55.0% | |
CTCCAGATTCGAACCCGTAG+TGG | - | chr4.1:18851896-18851915 | MS.gene36438:CDS | 55.0% | |
GCAACAGGAAGGTGATGAGG+TGG | - | chr4.1:18852915-18852934 | MS.gene36438:CDS | 55.0% | |
TAGTGGGGGCCATGACTTTG+AGG | - | chr4.1:18851913-18851932 | MS.gene36438:CDS | 55.0% | |
TGTCCCTTGGGCACAAGAGA+AGG | + | chr4.1:18853189-18853208 | None:intergenic | 55.0% | |
! | GTTGGTGGACACTTCAGTGG+TGG | - | chr4.1:18852124-18852143 | MS.gene36438:CDS | 55.0% |
!! | CACTTCAGTGGTGGTGGCTA+TGG | - | chr4.1:18852133-18852152 | MS.gene36438:CDS | 55.0% |
!! | GGTGTTGGTGGACACTTCAG+TGG | - | chr4.1:18852121-18852140 | MS.gene36438:CDS | 55.0% |
!! | TGGTGGTGGCTATGGAACCT+TGG | - | chr4.1:18852141-18852160 | MS.gene36438:CDS | 55.0% |
CCCCACTACGGGTTCGAATC+TGG | + | chr4.1:18851901-18851920 | None:intergenic | 60.0% | |
GGTGGACACTTCAGTGGTGG+TGG | - | chr4.1:18852127-18852146 | MS.gene36438:CDS | 60.0% | |
! | TGGGCTATTAGAGGTGGCGG+AGG | - | chr4.1:18852265-18852284 | MS.gene36438:CDS | 60.0% |
!!! | GGTGGCGGAGGAGCAAGTTT+TGG | - | chr4.1:18852277-18852296 | MS.gene36438:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 18851590 | 18853215 | 18851590 | ID=MS.gene36438 |
chr4.1 | mRNA | 18851590 | 18853215 | 18851590 | ID=MS.gene36438.t1;Parent=MS.gene36438 |
chr4.1 | exon | 18851590 | 18853215 | 18851590 | ID=MS.gene36438.t1.exon1;Parent=MS.gene36438.t1 |
chr4.1 | CDS | 18851590 | 18853215 | 18851590 | ID=cds.MS.gene36438.t1;Parent=MS.gene36438.t1 |
Gene Sequence |
Protein sequence |