Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35105.t1 | XP_013457291.1 | 95.2 | 542 | 26 | 0 | 1 | 542 | 1 | 542 | 2.30E-305 | 1057.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35105.t1 | Q8GTB6 | 51.1 | 544 | 253 | 6 | 6 | 541 | 7 | 545 | 4.0e-157 | 556.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35105.t1 | A0A072UNR7 | 95.2 | 542 | 26 | 0 | 1 | 542 | 1 | 542 | 1.7e-305 | 1057.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049710 | MS.gene35105 | 0.807583 | 4.71E-50 | -1.69E-46 |
MS.gene05015 | MS.gene35105 | 0.808699 | 2.72E-50 | -1.69E-46 |
MS.gene050381 | MS.gene35105 | 0.832153 | 1.11E-55 | -1.69E-46 |
MS.gene050883 | MS.gene35105 | 0.847939 | 8.42E-60 | -1.69E-46 |
MS.gene051044 | MS.gene35105 | 0.818668 | 1.74E-52 | -1.69E-46 |
MS.gene051127 | MS.gene35105 | 0.85045 | 1.68E-60 | -1.69E-46 |
MS.gene051138 | MS.gene35105 | 0.803215 | 3.88E-49 | -1.69E-46 |
MS.gene051341 | MS.gene35105 | 0.805255 | 1.46E-49 | -1.69E-46 |
MS.gene053488 | MS.gene35105 | 0.80111 | 1.05E-48 | -1.69E-46 |
MS.gene054056 | MS.gene35105 | 0.809612 | 1.74E-50 | -1.69E-46 |
MS.gene055124 | MS.gene35105 | 0.862161 | 6.16E-64 | -1.69E-46 |
MS.gene055942 | MS.gene35105 | 0.804697 | 1.91E-49 | -1.69E-46 |
MS.gene056224 | MS.gene35105 | 0.80417 | 2.46E-49 | -1.69E-46 |
MS.gene056310 | MS.gene35105 | 0.828913 | 6.90E-55 | -1.69E-46 |
MS.gene056311 | MS.gene35105 | 0.830674 | 2.57E-55 | -1.69E-46 |
MS.gene056313 | MS.gene35105 | 0.830142 | 3.47E-55 | -1.69E-46 |
MS.gene057550 | MS.gene35105 | 0.817588 | 3.05E-52 | -1.69E-46 |
MS.gene058093 | MS.gene35105 | 0.823822 | 1.13E-53 | -1.69E-46 |
MS.gene058099 | MS.gene35105 | 0.861547 | 9.50E-64 | -1.69E-46 |
MS.gene058108 | MS.gene35105 | 0.848951 | 4.42E-60 | -1.69E-46 |
MS.gene058109 | MS.gene35105 | 0.866956 | 1.95E-65 | -1.69E-46 |
MS.gene058111 | MS.gene35105 | 0.836837 | 7.40E-57 | -1.69E-46 |
MS.gene058171 | MS.gene35105 | 0.873895 | 1.03E-67 | -1.69E-46 |
MS.gene058173 | MS.gene35105 | 0.872415 | 3.24E-67 | -1.69E-46 |
MS.gene058175 | MS.gene35105 | 0.874803 | 5.08E-68 | -1.69E-46 |
MS.gene058179 | MS.gene35105 | 0.822045 | 2.92E-53 | -1.69E-46 |
MS.gene058180 | MS.gene35105 | 0.806948 | 6.42E-50 | -1.69E-46 |
MS.gene058493 | MS.gene35105 | 0.812765 | 3.60E-51 | -1.69E-46 |
MS.gene058628 | MS.gene35105 | 0.830576 | 2.72E-55 | -1.69E-46 |
MS.gene058629 | MS.gene35105 | 0.821366 | 4.20E-53 | -1.69E-46 |
MS.gene058630 | MS.gene35105 | 0.837324 | 5.56E-57 | -1.69E-46 |
MS.gene059037 | MS.gene35105 | 0.816721 | 4.78E-52 | -1.69E-46 |
MS.gene059044 | MS.gene35105 | 0.827343 | 1.65E-54 | -1.69E-46 |
MS.gene059045 | MS.gene35105 | 0.868369 | 6.87E-66 | -1.69E-46 |
MS.gene059690 | MS.gene35105 | 0.805793 | 1.12E-49 | -1.69E-46 |
MS.gene059694 | MS.gene35105 | 0.813358 | 2.67E-51 | -1.69E-46 |
MS.gene059697 | MS.gene35105 | 0.826152 | 3.17E-54 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35105.t1 | MTR_4g094492 | 95.203 | 542 | 26 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1051 |
MS.gene35105.t1 | MTR_4g094488 | 79.487 | 546 | 105 | 3 | 1 | 542 | 1 | 543 | 0.0 | 874 |
MS.gene35105.t1 | MTR_4g094495 | 79.781 | 549 | 101 | 5 | 1 | 542 | 1 | 546 | 0.0 | 872 |
MS.gene35105.t1 | MTR_4g094478 | 78.293 | 539 | 112 | 2 | 1 | 537 | 1 | 536 | 0.0 | 857 |
MS.gene35105.t1 | MTR_4g094480 | 77.022 | 544 | 120 | 2 | 1 | 542 | 1 | 541 | 0.0 | 850 |
MS.gene35105.t1 | MTR_4g094418 | 70.776 | 438 | 120 | 3 | 104 | 536 | 1 | 435 | 0.0 | 650 |
MS.gene35105.t1 | MTR_2g031560 | 51.613 | 527 | 244 | 5 | 13 | 536 | 5 | 523 | 0.0 | 572 |
MS.gene35105.t1 | MTR_2g031390 | 52.052 | 536 | 241 | 8 | 5 | 536 | 6 | 529 | 0.0 | 570 |
MS.gene35105.t1 | MTR_3g009880 | 54.924 | 528 | 224 | 9 | 12 | 536 | 4 | 520 | 0.0 | 559 |
MS.gene35105.t1 | MTR_3g009760 | 53.545 | 536 | 229 | 9 | 6 | 536 | 2 | 522 | 0.0 | 557 |
MS.gene35105.t1 | MTR_3g009820 | 52.897 | 535 | 234 | 8 | 6 | 536 | 2 | 522 | 0.0 | 551 |
MS.gene35105.t1 | MTR_2g031420 | 53.371 | 534 | 236 | 6 | 6 | 536 | 4 | 527 | 0.0 | 551 |
MS.gene35105.t1 | MTR_4g094520 | 51.887 | 530 | 245 | 6 | 10 | 536 | 10 | 532 | 0.0 | 548 |
MS.gene35105.t1 | MTR_2g031460 | 53.933 | 534 | 233 | 6 | 6 | 536 | 4 | 527 | 0.0 | 546 |
MS.gene35105.t1 | MTR_4g094498 | 55.578 | 502 | 215 | 5 | 35 | 536 | 41 | 534 | 0.0 | 545 |
MS.gene35105.t1 | MTR_2g031590 | 52.134 | 539 | 247 | 5 | 2 | 536 | 1 | 532 | 0.0 | 545 |
MS.gene35105.t1 | MTR_4g094518 | 53.996 | 513 | 220 | 8 | 30 | 536 | 28 | 530 | 0.0 | 531 |
MS.gene35105.t1 | MTR_2g031490 | 51.111 | 540 | 251 | 9 | 3 | 536 | 6 | 538 | 2.30e-179 | 516 |
MS.gene35105.t1 | MTR_4g091150 | 51.772 | 508 | 239 | 4 | 31 | 536 | 37 | 540 | 1.92e-176 | 509 |
MS.gene35105.t1 | MTR_2g031510 | 49.904 | 519 | 249 | 6 | 26 | 540 | 33 | 544 | 8.08e-173 | 499 |
MS.gene35105.t1 | MTR_4g057990 | 49.621 | 528 | 256 | 7 | 8 | 535 | 4 | 521 | 2.47e-170 | 492 |
MS.gene35105.t1 | MTR_4g094515 | 49.440 | 536 | 262 | 5 | 7 | 539 | 624 | 1153 | 1.32e-169 | 511 |
MS.gene35105.t1 | MTR_4g094515 | 50.197 | 508 | 242 | 7 | 32 | 535 | 39 | 539 | 1.09e-166 | 503 |
MS.gene35105.t1 | MTR_4g091200 | 47.925 | 530 | 262 | 5 | 7 | 535 | 9 | 525 | 4.69e-169 | 489 |
MS.gene35105.t1 | MTR_6g017205 | 48.204 | 529 | 261 | 5 | 10 | 537 | 11 | 527 | 4.73e-169 | 490 |
MS.gene35105.t1 | MTR_4g088355 | 49.119 | 511 | 255 | 3 | 32 | 541 | 32 | 538 | 7.32e-168 | 487 |
MS.gene35105.t1 | MTR_4g091190 | 48.728 | 511 | 253 | 5 | 32 | 541 | 31 | 533 | 1.41e-164 | 478 |
MS.gene35105.t1 | MTR_4g091170 | 46.767 | 464 | 223 | 3 | 73 | 535 | 101 | 541 | 1.36e-153 | 451 |
MS.gene35105.t1 | MTR_2g023590 | 48.188 | 469 | 235 | 4 | 68 | 535 | 4 | 465 | 5.32e-147 | 431 |
MS.gene35105.t1 | MTR_1g076830 | 43.659 | 481 | 261 | 7 | 57 | 533 | 58 | 532 | 2.25e-126 | 381 |
MS.gene35105.t1 | MTR_2g031600 | 58.943 | 246 | 99 | 1 | 1 | 246 | 1 | 244 | 1.36e-87 | 276 |
MS.gene35105.t1 | MTR_2g031600 | 51.572 | 159 | 74 | 2 | 378 | 536 | 245 | 400 | 3.31e-50 | 178 |
MS.gene35105.t1 | MTR_3g009850 | 58.696 | 230 | 88 | 5 | 308 | 536 | 5 | 228 | 2.64e-84 | 261 |
MS.gene35105.t1 | MTR_2g084370 | 47.748 | 111 | 36 | 2 | 128 | 238 | 1 | 89 | 3.79e-31 | 116 |
MS.gene35105.t1 | MTR_2g084405 | 53.750 | 80 | 37 | 0 | 128 | 207 | 1 | 80 | 3.46e-21 | 89.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35105.t1 | AT5G44400 | 49.907 | 539 | 251 | 9 | 10 | 537 | 7 | 537 | 0.0 | 526 |
MS.gene35105.t1 | AT5G44440 | 50.464 | 539 | 249 | 7 | 2 | 534 | 1 | 527 | 0.0 | 523 |
MS.gene35105.t1 | AT5G44440 | 50.464 | 539 | 249 | 7 | 2 | 534 | 71 | 597 | 0.0 | 522 |
MS.gene35105.t1 | AT4G20820 | 48.885 | 538 | 256 | 6 | 2 | 534 | 1 | 524 | 0.0 | 521 |
MS.gene35105.t1 | AT2G34790 | 48.757 | 523 | 250 | 9 | 21 | 537 | 21 | 531 | 2.34e-180 | 518 |
MS.gene35105.t1 | AT5G44360 | 48.807 | 545 | 257 | 10 | 1 | 537 | 1 | 531 | 5.43e-175 | 504 |
MS.gene35105.t1 | AT5G44360 | 48.807 | 545 | 257 | 10 | 1 | 537 | 17 | 547 | 5.76e-175 | 505 |
MS.gene35105.t1 | AT5G44410 | 49.534 | 537 | 248 | 8 | 4 | 534 | 8 | 527 | 1.47e-174 | 504 |
MS.gene35105.t1 | AT5G44390 | 46.863 | 542 | 273 | 9 | 3 | 536 | 6 | 540 | 3.38e-174 | 503 |
MS.gene35105.t1 | AT1G30760 | 48.837 | 516 | 244 | 9 | 27 | 535 | 29 | 531 | 2.76e-171 | 495 |
MS.gene35105.t1 | AT1G30760 | 48.837 | 516 | 244 | 9 | 27 | 535 | 47 | 549 | 4.22e-171 | 495 |
MS.gene35105.t1 | AT5G44380 | 49.630 | 540 | 260 | 7 | 2 | 536 | 7 | 539 | 1.62e-168 | 488 |
MS.gene35105.t1 | AT4G20860 | 49.126 | 515 | 243 | 10 | 30 | 536 | 26 | 529 | 1.94e-168 | 488 |
MS.gene35105.t1 | AT5G44380 | 49.630 | 540 | 260 | 7 | 2 | 536 | 47 | 579 | 3.41e-168 | 489 |
MS.gene35105.t1 | AT1G30730 | 47.826 | 529 | 262 | 6 | 8 | 534 | 7 | 523 | 1.42e-166 | 483 |
MS.gene35105.t1 | AT1G11770 | 48.633 | 512 | 251 | 7 | 28 | 536 | 27 | 529 | 5.31e-166 | 482 |
MS.gene35105.t1 | AT1G30700 | 47.932 | 532 | 264 | 6 | 8 | 536 | 5 | 526 | 7.26e-164 | 476 |
MS.gene35105.t1 | AT1G26420 | 47.015 | 536 | 266 | 9 | 4 | 534 | 1 | 523 | 1.20e-163 | 476 |
MS.gene35105.t1 | AT1G26380 | 47.378 | 534 | 264 | 8 | 11 | 539 | 7 | 528 | 2.78e-162 | 472 |
MS.gene35105.t1 | AT4G20840 | 46.394 | 513 | 263 | 7 | 31 | 540 | 36 | 539 | 3.78e-160 | 467 |
MS.gene35105.t1 | AT1G30720 | 49.008 | 504 | 247 | 5 | 33 | 534 | 29 | 524 | 2.09e-158 | 462 |
MS.gene35105.t1 | AT1G26400 | 45.572 | 542 | 265 | 9 | 1 | 533 | 1 | 521 | 2.33e-157 | 459 |
MS.gene35105.t1 | AT1G26410 | 47.628 | 506 | 254 | 8 | 33 | 536 | 53 | 549 | 7.72e-157 | 459 |
MS.gene35105.t1 | AT1G30710 | 46.182 | 537 | 262 | 11 | 8 | 536 | 11 | 528 | 8.59e-157 | 458 |
MS.gene35105.t1 | AT1G34575 | 47.961 | 515 | 247 | 10 | 30 | 539 | 29 | 527 | 2.07e-156 | 457 |
MS.gene35105.t1 | AT1G26390 | 47.921 | 505 | 254 | 5 | 32 | 534 | 28 | 525 | 1.16e-155 | 455 |
MS.gene35105.t1 | AT4G20800 | 46.032 | 504 | 265 | 4 | 31 | 534 | 27 | 523 | 1.37e-154 | 452 |
MS.gene35105.t1 | AT4G20830 | 46.911 | 518 | 263 | 7 | 26 | 540 | 32 | 540 | 1.99e-152 | 447 |
MS.gene35105.t1 | AT1G01980 | 46.212 | 528 | 266 | 11 | 20 | 539 | 20 | 537 | 3.01e-152 | 447 |
MS.gene35105.t1 | AT4G20830 | 47.082 | 514 | 260 | 7 | 26 | 536 | 32 | 536 | 1.29e-151 | 446 |
MS.gene35105.t1 | AT1G30740 | 45.810 | 537 | 272 | 10 | 12 | 538 | 3 | 530 | 1.83e-148 | 437 |
MS.gene35105.t1 | AT1G30740 | 45.810 | 537 | 272 | 10 | 12 | 538 | 6 | 533 | 2.17e-148 | 437 |
MS.gene35105.t1 | AT2G34810 | 44.706 | 510 | 275 | 4 | 31 | 536 | 33 | 539 | 1.77e-142 | 422 |
Find 113 sgRNAs with CRISPR-Local
Find 135 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAATCTGGAGGCCATGATTT+TGG | 0.130838 | 4.4:+19890167 | None:intergenic |
AAATTATGGCTGTTTGAATA+TGG | 0.187785 | 4.4:+19890194 | None:intergenic |
GCTACAAGCAAGCTAGTATT+TGG | 0.235073 | 4.4:-19888980 | MS.gene35105:CDS |
CGCCTTTCGGAAATTGAAAA+AGG | 0.237346 | 4.4:+19889420 | None:intergenic |
AAAACTCCTATTCCTGAAAA+TGG | 0.251375 | 4.4:-19889317 | MS.gene35105:CDS |
CAATGGGTGAAGATTTGTTT+TGG | 0.263104 | 4.4:-19889805 | MS.gene35105:CDS |
GGTGGTGGAGGAGCAAGTTT+TGG | 0.291186 | 4.4:-19889773 | MS.gene35105:CDS |
ATATTTCAATCCTTGTTTCT+TGG | 0.298323 | 4.4:-19889545 | MS.gene35105:CDS |
GTTTCAAAGTCTCCAAGAAT+TGG | 0.300797 | 4.4:-19889059 | MS.gene35105:CDS |
GTGAGCATCAATTATATTAT+CGG | 0.307370 | 4.4:+19889865 | None:intergenic |
TTTGCTTTGTAAATAAATCT+TGG | 0.313472 | 4.4:+19889353 | None:intergenic |
GTTTCCTTATGGTGGAATAA+TGG | 0.315442 | 4.4:-19889234 | MS.gene35105:CDS |
GGAACCTTGGTTCGTAAATA+TGG | 0.319156 | 4.4:-19889896 | MS.gene35105:CDS |
CCTTTGAAAGACAATATTGA+TGG | 0.321417 | 4.4:+19889607 | None:intergenic |
AATCAACCTGGTAATGAATA+TGG | 0.323880 | 4.4:+19889159 | None:intergenic |
ATTCCTGAAAATGGATTAGA+AGG | 0.350473 | 4.4:-19889308 | MS.gene35105:CDS |
CCCCACTACGGGTTCGAATC+TGG | 0.361159 | 4.4:+19890152 | None:intergenic |
TAGTTGATATACCCAATTCT+TGG | 0.362017 | 4.4:+19889047 | None:intergenic |
CATTGATCTCGTAAACTTCA+AGG | 0.362548 | 4.4:-19890080 | MS.gene35105:CDS |
ATATTCATTACCAGGTTGAT+TGG | 0.363341 | 4.4:-19889157 | MS.gene35105:CDS |
TACTGGTGAGTAAGAGGAAT+TGG | 0.365636 | 4.4:+19890300 | None:intergenic |
TTGCTTTGTAAATAAATCTT+GGG | 0.367450 | 4.4:+19889354 | None:intergenic |
ATTAATTTATTTGTGTCCCT+TGG | 0.367735 | 4.4:+19888851 | None:intergenic |
AACTATAGAGACCTTGATAT+TGG | 0.379359 | 4.4:-19889029 | MS.gene35105:CDS |
CAAGAACAACTTCAAAAGAT+TGG | 0.382060 | 4.4:-19888943 | MS.gene35105:CDS |
CCATATCATCATTGCACCTT+TGG | 0.387821 | 4.4:+19889256 | None:intergenic |
CTTGGAGACTTTGAAACAAA+AGG | 0.388823 | 4.4:+19889065 | None:intergenic |
CAGCTGGGAAACCGAGATTT+CGG | 0.397206 | 4.4:+19889969 | None:intergenic |
CTACAAGCAAGCTAGTATTT+GGG | 0.397390 | 4.4:-19888979 | MS.gene35105:CDS |
CCAAAGGTGCAATGATGATA+TGG | 0.399938 | 4.4:-19889256 | MS.gene35105:CDS |
ACTTCAGGCAATGCGCCTTT+CGG | 0.404901 | 4.4:+19889407 | None:intergenic |
GTAAACACCGTCACAGTTGA+TGG | 0.407633 | 4.4:+19889713 | None:intergenic |
AATTATGGCTGTTTGAATAT+GGG | 0.408415 | 4.4:+19890195 | None:intergenic |
TTTCAAAGTCTCCAAGAATT+GGG | 0.412921 | 4.4:-19889058 | MS.gene35105:CDS |
AAAATGGATTAGAAGGAATA+TGG | 0.414702 | 4.4:-19889301 | MS.gene35105:CDS |
TTAATTTATTTGTGTCCCTT+GGG | 0.415606 | 4.4:+19888852 | None:intergenic |
AAAATTGTATTGAAATGAGT+TGG | 0.420053 | 4.4:-19889460 | MS.gene35105:CDS |
AGATAAACTCATTCCCTTGA+TGG | 0.422488 | 4.4:-19889516 | MS.gene35105:CDS |
TTTCAATCCTTGTTTCTTGG+AGG | 0.424294 | 4.4:-19889542 | MS.gene35105:CDS |
ACGAGATCAATGACAACAAA+TGG | 0.429670 | 4.4:+19890091 | None:intergenic |
GTGATGATGACAAGTGGTTT+AGG | 0.431669 | 4.4:+19890232 | None:intergenic |
ATGATGATATGGTTTCCTTA+TGG | 0.438370 | 4.4:-19889245 | MS.gene35105:CDS |
ATTCCATTTCCTCATAGAAA+AGG | 0.440912 | 4.4:-19889191 | MS.gene35105:CDS |
GCTGGTGCTTGTCCTACAAT+AGG | 0.442267 | 4.4:-19889950 | MS.gene35105:CDS |
AAATGGAACTTCTGAAACAT+AGG | 0.442493 | 4.4:+19890108 | None:intergenic |
GTTCTGTTAAGCAACACTTC+AGG | 0.449144 | 4.4:+19889392 | None:intergenic |
TGAAATGAGTTGGATTGAAT+CGG | 0.452927 | 4.4:-19889450 | MS.gene35105:CDS |
ATAGACAAGTATGAGCTTAG+AGG | 0.453895 | 4.4:+19890457 | None:intergenic |
CACTTCAGTGGTGGTGGCTA+TGG | 0.458500 | 4.4:-19889917 | MS.gene35105:CDS |
TGAGTAAGAGGAATTGGTTT+TGG | 0.462718 | 4.4:+19890306 | None:intergenic |
TTTGAGTACTGGTGAGTAAG+AGG | 0.466502 | 4.4:+19890294 | None:intergenic |
TCCAGATTCGAACCCGTAGT+GGG | 0.475163 | 4.4:-19890153 | MS.gene35105:CDS |
TTACCAGGTTGATTGGCAAC+AGG | 0.475690 | 4.4:-19889150 | MS.gene35105:CDS |
ATAATTTGTTCCCAAAATCA+TGG | 0.478899 | 4.4:-19890178 | MS.gene35105:CDS |
AAAGTTTAGAGGATCAACTT+TGG | 0.482938 | 4.4:+19888908 | None:intergenic |
TGTAGAAAGCAAAACTGCTT+GGG | 0.483507 | 4.4:-19890044 | MS.gene35105:CDS |
TGGTCTTTGTTTCATGAAGA+TGG | 0.483871 | 4.4:-19889281 | MS.gene35105:CDS |
TGAGTTGTATATTTGAGTAC+TGG | 0.484352 | 4.4:+19890283 | None:intergenic |
GAACAAAAGTTTCCTGAGTT+GGG | 0.486919 | 4.4:-19889494 | MS.gene35105:CDS |
CGAAATCTCGGTTTCCCAGC+TGG | 0.487820 | 4.4:-19889968 | MS.gene35105:CDS |
TGTCCACCAACACCTATTGT+AGG | 0.487897 | 4.4:+19889938 | None:intergenic |
AAAACTGCTTGGGTTCAGTC+TGG | 0.489702 | 4.4:-19890034 | MS.gene35105:CDS |
TGGGCTATTAGAGGTGGTGG+AGG | 0.490480 | 4.4:-19889785 | MS.gene35105:CDS |
ATTGGTGTGAATAACATTGA+TGG | 0.497447 | 4.4:-19889011 | MS.gene35105:CDS |
GTTTACTGTTGCAAAAGCAT+TGG | 0.502433 | 4.4:-19889696 | MS.gene35105:CDS |
GTATCCATTATTCCACCATA+AGG | 0.507512 | 4.4:+19889230 | None:intergenic |
ATTGTAGGACAAGCACCAGC+TGG | 0.507999 | 4.4:+19889953 | None:intergenic |
CTTCCTGTTGCCAATCAACC+TGG | 0.513010 | 4.4:+19889147 | None:intergenic |
TGTCCCTTGGGCACAAGAGA+AGG | 0.516026 | 4.4:+19888864 | None:intergenic |
ATGTAGAAAGCAAAACTGCT+TGG | 0.516128 | 4.4:-19890045 | MS.gene35105:CDS |
GGAACAAAAGTTTCCTGAGT+TGG | 0.517366 | 4.4:-19889495 | MS.gene35105:CDS |
TCTCTAACCACACCCAACTC+AGG | 0.530976 | 4.4:+19889482 | None:intergenic |
AATAACTAGAAAGACATTGA+AGG | 0.537999 | 4.4:+19890365 | None:intergenic |
GTTCAGTCTGGTGCAACACT+TGG | 0.538464 | 4.4:-19890022 | MS.gene35105:CDS |
TGTTATTCACACCAATATCA+AGG | 0.539812 | 4.4:+19889018 | None:intergenic |
CTCCAGATTCGAACCCGTAG+TGG | 0.540664 | 4.4:-19890154 | MS.gene35105:CDS |
TTTATACCATATTCATTACC+AGG | 0.548049 | 4.4:-19889165 | MS.gene35105:CDS |
TTTCTTGACAGACAAGCAAT+GGG | 0.551117 | 4.4:-19889821 | MS.gene35105:CDS |
CCATCAATATTGTCTTTCAA+AGG | 0.551890 | 4.4:-19889607 | MS.gene35105:CDS |
GTTTCTTGACAGACAAGCAA+TGG | 0.552283 | 4.4:-19889822 | MS.gene35105:CDS |
AAAGTTTCCTGAGTTGGGTG+TGG | 0.552427 | 4.4:-19889489 | MS.gene35105:CDS |
TATACCTTCTCTTGTGCCCA+AGG | 0.557558 | 4.4:-19888868 | MS.gene35105:CDS |
GGTGGACACTTCAGTGGTGG+TGG | 0.569924 | 4.4:-19889923 | MS.gene35105:CDS |
TGTTCACAAGTGGCAGTATG+TGG | 0.580228 | 4.4:-19889654 | MS.gene35105:CDS |
ATGATATGGTTTCCTTATGG+TGG | 0.582909 | 4.4:-19889242 | MS.gene35105:CDS |
ATGGCTGTTTGAATATGGGA+AGG | 0.583461 | 4.4:+19890199 | None:intergenic |
CTACAAAGCTTGTTCACAAG+TGG | 0.585250 | 4.4:-19889664 | MS.gene35105:CDS |
TGCTCACATAATTGATGTGA+AGG | 0.585552 | 4.4:-19889849 | MS.gene35105:CDS |
ATCTACACCTCCAAGAAACA+AGG | 0.586811 | 4.4:+19889535 | None:intergenic |
ACATAATTGATGTGAAGGGT+AGG | 0.589985 | 4.4:-19889844 | MS.gene35105:CDS |
TGTCCTACAATAGGTGTTGG+TGG | 0.592774 | 4.4:-19889941 | MS.gene35105:CDS |
CCAGATTCGAACCCGTAGTG+GGG | 0.593132 | 4.4:-19890152 | MS.gene35105:CDS |
GCTTGTCCTACAATAGGTGT+TGG | 0.602006 | 4.4:-19889944 | MS.gene35105:CDS |
TACAAGCAAGCTAGTATTTG+GGG | 0.602138 | 4.4:-19888978 | MS.gene35105:CDS |
TGGTGGTGGCTATGGAACCT+TGG | 0.603059 | 4.4:-19889909 | MS.gene35105:CDS |
TTGTAGGACAAGCACCAGCT+GGG | 0.603228 | 4.4:+19889954 | None:intergenic |
TGAATATGGGAAGGTTCTAG+AGG | 0.607797 | 4.4:+19890208 | None:intergenic |
CAGGTTGATTGGCAACAGGA+AGG | 0.608073 | 4.4:-19889146 | MS.gene35105:CDS |
AGGATAGACCCTCAAAGTCA+TGG | 0.608222 | 4.4:+19890128 | None:intergenic |
CAGATTCGAACCCGTAGTGG+GGG | 0.608743 | 4.4:-19890151 | MS.gene35105:CDS |
GCAACAGGAAGGTGATGAGG+TGG | 0.620727 | 4.4:-19889135 | MS.gene35105:CDS |
TCAAGTTCCATCAACTGTGA+CGG | 0.625682 | 4.4:-19889720 | MS.gene35105:CDS |
GTTGGTGGACACTTCAGTGG+TGG | 0.625730 | 4.4:-19889926 | MS.gene35105:CDS |
TTTCATGAAGATGGTGCCAA+AGG | 0.627110 | 4.4:-19889272 | MS.gene35105:CDS |
AAGTGGTTTAGGTGTTGTGT+AGG | 0.631140 | 4.4:+19890243 | None:intergenic |
AAGACCATATTTACGAACCA+AGG | 0.633836 | 4.4:+19889892 | None:intergenic |
ATACCTTCTCTTGTGCCCAA+GGG | 0.635419 | 4.4:-19888867 | MS.gene35105:CDS |
CACTACGGGTTCGAATCTGG+AGG | 0.666507 | 4.4:+19890155 | None:intergenic |
GGTGTTGGTGGACACTTCAG+TGG | 0.668243 | 4.4:-19889929 | MS.gene35105:CDS |
GCTCACATAATTGATGTGAA+GGG | 0.694549 | 4.4:-19889848 | MS.gene35105:CDS |
AGAGGTGTGATGATGACAAG+TGG | 0.700893 | 4.4:+19890226 | None:intergenic |
AGTGTTGCTTAACAGAACAC+TGG | 0.704218 | 4.4:-19889387 | MS.gene35105:CDS |
TTGGCAACAGGAAGGTGATG+AGG | 0.705230 | 4.4:-19889138 | MS.gene35105:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAGAAAAATTTATAATTACA+TGG | - | chr4.4:19890230-19890249 | MS.gene35105:CDS | 10.0% |
!! | AAAATTGTATTGAAATGAGT+TGG | - | chr4.4:19889860-19889879 | MS.gene35105:CDS | 20.0% |
!! | AGGATAAATTCAAGTAAAAA+AGG | - | chr4.4:19889733-19889752 | MS.gene35105:CDS | 20.0% |
!! | TTGCTTTGTAAATAAATCTT+GGG | + | chr4.4:19889969-19889988 | None:intergenic | 20.0% |
!! | TTTGCTTTGTAAATAAATCT+TGG | + | chr4.4:19889970-19889989 | None:intergenic | 20.0% |
!!! | TATAAATTTCCTTTTCTATG+AGG | + | chr4.4:19890141-19890160 | None:intergenic | 20.0% |
! | AAATTATGGCTGTTTGAATA+TGG | + | chr4.4:19889129-19889148 | None:intergenic | 25.0% |
! | AATAACTAGAAAGACATTGA+AGG | + | chr4.4:19888958-19888977 | None:intergenic | 25.0% |
! | AATTATGGCTGTTTGAATAT+GGG | + | chr4.4:19889128-19889147 | None:intergenic | 25.0% |
! | GTGAGCATCAATTATATTAT+CGG | + | chr4.4:19889458-19889477 | None:intergenic | 25.0% |
! | TTTATACCATATTCATTACC+AGG | - | chr4.4:19890155-19890174 | MS.gene35105:CDS | 25.0% |
!! | ATATTTCAATCCTTGTTTCT+TGG | - | chr4.4:19889775-19889794 | MS.gene35105:CDS | 25.0% |
!! | TCATTTCTGAAAAAGTTTAG+AGG | + | chr4.4:19890426-19890445 | None:intergenic | 25.0% |
!!! | AAAATGGATTAGAAGGAATA+TGG | - | chr4.4:19890019-19890038 | MS.gene35105:CDS | 25.0% |
!!! | ATAATTTGTTCCCAAAATCA+TGG | - | chr4.4:19889142-19889161 | MS.gene35105:CDS | 25.0% |
!!! | ATGATTTTGGGAACAAATTA+TGG | + | chr4.4:19889143-19889162 | None:intergenic | 25.0% |
AAAACTCCTATTCCTGAAAA+TGG | - | chr4.4:19890003-19890022 | MS.gene35105:CDS | 30.0% | |
AAAGTTTAGAGGATCAACTT+TGG | + | chr4.4:19890415-19890434 | None:intergenic | 30.0% | |
AACTATAGAGACCTTGATAT+TGG | - | chr4.4:19890291-19890310 | MS.gene35105:CDS | 30.0% | |
ATGATGATATGGTTTCCTTA+TGG | - | chr4.4:19890075-19890094 | MS.gene35105:CDS | 30.0% | |
ATTCCATTTCCTCATAGAAA+AGG | - | chr4.4:19890129-19890148 | MS.gene35105:CDS | 30.0% | |
ATTGGTGTGAATAACATTGA+TGG | - | chr4.4:19890309-19890328 | MS.gene35105:CDS | 30.0% | |
CAAGAACAACTTCAAAAGAT+TGG | - | chr4.4:19890377-19890396 | MS.gene35105:CDS | 30.0% | |
CCATCAATATTGTCTTTCAA+AGG | - | chr4.4:19889713-19889732 | MS.gene35105:CDS | 30.0% | |
TGAGTTGTATATTTGAGTAC+TGG | + | chr4.4:19889040-19889059 | None:intergenic | 30.0% | |
TGGAAAAACTGCACATTAAT+TGG | - | chr4.4:19890205-19890224 | MS.gene35105:CDS | 30.0% | |
TGTTATTCACACCAATATCA+AGG | + | chr4.4:19890305-19890324 | None:intergenic | 30.0% | |
TTTCAAAGTCTCCAAGAATT+GGG | - | chr4.4:19890262-19890281 | MS.gene35105:CDS | 30.0% | |
! | AATCAACCTGGTAATGAATA+TGG | + | chr4.4:19890164-19890183 | None:intergenic | 30.0% |
! | ATTCCTTCTAATCCATTTTC+AGG | + | chr4.4:19890018-19890037 | None:intergenic | 30.0% |
! | CCTTTGAAAGACAATATTGA+TGG | + | chr4.4:19889716-19889735 | None:intergenic | 30.0% |
! | TAGTTGATATACCCAATTCT+TGG | + | chr4.4:19890276-19890295 | None:intergenic | 30.0% |
! | TGAAATGAGTTGGATTGAAT+CGG | - | chr4.4:19889870-19889889 | MS.gene35105:CDS | 30.0% |
! | TTTCCTTTTCTATGAGGAAA+TGG | + | chr4.4:19890135-19890154 | None:intergenic | 30.0% |
!! | AAATGGAACTTCTGAAACAT+AGG | + | chr4.4:19889215-19889234 | None:intergenic | 30.0% |
!! | AATGGGTGAAGATTTGTTTT+GGG | - | chr4.4:19889516-19889535 | MS.gene35105:CDS | 30.0% |
!! | ATATTCATTACCAGGTTGAT+TGG | - | chr4.4:19890163-19890182 | MS.gene35105:CDS | 30.0% |
!! | ATTCCTGAAAATGGATTAGA+AGG | - | chr4.4:19890012-19890031 | MS.gene35105:CDS | 30.0% |
!! | TCTAATCCATTTTCAGGAAT+AGG | + | chr4.4:19890012-19890031 | None:intergenic | 30.0% |
!!! | GTTTTGGAGTCATAATTTCA+TGG | - | chr4.4:19889563-19889582 | MS.gene35105:CDS | 30.0% |
!!! | TACCTTTTTCAATTTCCGAA+AGG | - | chr4.4:19889898-19889917 | MS.gene35105:CDS | 30.0% |
AAGACCATATTTACGAACCA+AGG | + | chr4.4:19889431-19889450 | None:intergenic | 35.0% | |
ACATAATTGATGTGAAGGGT+AGG | - | chr4.4:19889476-19889495 | MS.gene35105:CDS | 35.0% | |
ACGAGATCAATGACAACAAA+TGG | + | chr4.4:19889232-19889251 | None:intergenic | 35.0% | |
AGATAAACTCATTCCCTTGA+TGG | - | chr4.4:19889804-19889823 | MS.gene35105:CDS | 35.0% | |
ATAGACAAGTATGAGCTTAG+AGG | + | chr4.4:19888866-19888885 | None:intergenic | 35.0% | |
ATGATATGGTTTCCTTATGG+TGG | - | chr4.4:19890078-19890097 | MS.gene35105:CDS | 35.0% | |
ATGTAGAAAGCAAAACTGCT+TGG | - | chr4.4:19889275-19889294 | MS.gene35105:CDS | 35.0% | |
CATTGATCTCGTAAACTTCA+AGG | - | chr4.4:19889240-19889259 | MS.gene35105:CDS | 35.0% | |
CTACAAGCAAGCTAGTATTT+GGG | - | chr4.4:19890341-19890360 | MS.gene35105:CDS | 35.0% | |
GAACAAAAGTTTCCTGAGTT+GGG | - | chr4.4:19889826-19889845 | MS.gene35105:CDS | 35.0% | |
GCTCACATAATTGATGTGAA+GGG | - | chr4.4:19889472-19889491 | MS.gene35105:CDS | 35.0% | |
GTATCCATTATTCCACCATA+AGG | + | chr4.4:19890093-19890112 | None:intergenic | 35.0% | |
GTTTCAAAGTCTCCAAGAAT+TGG | - | chr4.4:19890261-19890280 | MS.gene35105:CDS | 35.0% | |
TACAAGCAAGCTAGTATTTG+GGG | - | chr4.4:19890342-19890361 | MS.gene35105:CDS | 35.0% | |
TGCTCACATAATTGATGTGA+AGG | - | chr4.4:19889471-19889490 | MS.gene35105:CDS | 35.0% | |
TGTAGAAAGCAAAACTGCTT+GGG | - | chr4.4:19889276-19889295 | MS.gene35105:CDS | 35.0% | |
TTTCTTGACAGACAAGCAAT+GGG | - | chr4.4:19889499-19889518 | MS.gene35105:CDS | 35.0% | |
! | AGGAAACTTTTGTTCCATCA+AGG | + | chr4.4:19889821-19889840 | None:intergenic | 35.0% |
! | GGAAACTTTTGTTCCATCAA+GGG | + | chr4.4:19889820-19889839 | None:intergenic | 35.0% |
! | GTTTACTGTTGCAAAAGCAT+TGG | - | chr4.4:19889624-19889643 | MS.gene35105:CDS | 35.0% |
! | GTTTCCTTATGGTGGAATAA+TGG | - | chr4.4:19890086-19890105 | MS.gene35105:CDS | 35.0% |
! | TGGTCTTTGTTTCATGAAGA+TGG | - | chr4.4:19890039-19890058 | MS.gene35105:CDS | 35.0% |
! | TTTCAATCCTTGTTTCTTGG+AGG | - | chr4.4:19889778-19889797 | MS.gene35105:CDS | 35.0% |
!! | CAATGGGTGAAGATTTGTTT+TGG | - | chr4.4:19889515-19889534 | MS.gene35105:CDS | 35.0% |
!! | CTTGGAGACTTTGAAACAAA+AGG | + | chr4.4:19890258-19890277 | None:intergenic | 35.0% |
!! | TGAGTAAGAGGAATTGGTTT+TGG | + | chr4.4:19889017-19889036 | None:intergenic | 35.0% |
!!! | GATTTGTTTTGGGCTATTAG+AGG | - | chr4.4:19889526-19889545 | MS.gene35105:CDS | 35.0% |
AGCCAAAAAAGCCGAAATCT+CGG | - | chr4.4:19889340-19889359 | MS.gene35105:CDS | 40.0% | |
ATCTACACCTCCAAGAAACA+AGG | + | chr4.4:19889788-19889807 | None:intergenic | 40.0% | |
ATGGCTGTTTGAATATGGGA+AGG | + | chr4.4:19889124-19889143 | None:intergenic | 40.0% | |
CCATATCATCATTGCACCTT+TGG | + | chr4.4:19890067-19890086 | None:intergenic | 40.0% | |
CGCCTTTCGGAAATTGAAAA+AGG | + | chr4.4:19889903-19889922 | None:intergenic | 40.0% | |
GCTACAAGCAAGCTAGTATT+TGG | - | chr4.4:19890340-19890359 | MS.gene35105:CDS | 40.0% | |
GGAACAAAAGTTTCCTGAGT+TGG | - | chr4.4:19889825-19889844 | MS.gene35105:CDS | 40.0% | |
GTTCTGTTAAGCAACACTTC+AGG | + | chr4.4:19889931-19889950 | None:intergenic | 40.0% | |
GTTTCTTGACAGACAAGCAA+TGG | - | chr4.4:19889498-19889517 | MS.gene35105:CDS | 40.0% | |
TACTGGTGAGTAAGAGGAAT+TGG | + | chr4.4:19889023-19889042 | None:intergenic | 40.0% | |
TCAAGTTCCATCAACTGTGA+CGG | - | chr4.4:19889600-19889619 | MS.gene35105:CDS | 40.0% | |
! | AAGTGGTTTAGGTGTTGTGT+AGG | + | chr4.4:19889080-19889099 | None:intergenic | 40.0% |
! | AATCTGGAGGCCATGATTTT+GGG | + | chr4.4:19889155-19889174 | None:intergenic | 40.0% |
! | CCAAAGGTGCAATGATGATA+TGG | - | chr4.4:19890064-19890083 | MS.gene35105:CDS | 40.0% |
! | CTACAAAGCTTGTTCACAAG+TGG | - | chr4.4:19889656-19889675 | MS.gene35105:CDS | 40.0% |
! | GGAACCTTGGTTCGTAAATA+TGG | - | chr4.4:19889424-19889443 | MS.gene35105:CDS | 40.0% |
! | GTGATGATGACAAGTGGTTT+AGG | + | chr4.4:19889091-19889110 | None:intergenic | 40.0% |
! | TGAATATGGGAAGGTTCTAG+AGG | + | chr4.4:19889115-19889134 | None:intergenic | 40.0% |
! | TTTCATGAAGATGGTGCCAA+AGG | - | chr4.4:19890048-19890067 | MS.gene35105:CDS | 40.0% |
!! | AGTGTTGCTTAACAGAACAC+TGG | - | chr4.4:19889933-19889952 | MS.gene35105:CDS | 40.0% |
!! | TTTGAGTACTGGTGAGTAAG+AGG | + | chr4.4:19889029-19889048 | None:intergenic | 40.0% |
!!! | AACCGAGATTTCGGCTTTTT+TGG | + | chr4.4:19889345-19889364 | None:intergenic | 40.0% |
!!! | TTGTTTTGGGCTATTAGAGG+TGG | - | chr4.4:19889529-19889548 | MS.gene35105:CDS | 40.0% |
AAAACTGCTTGGGTTCAGTC+TGG | - | chr4.4:19889286-19889305 | MS.gene35105:CDS | 45.0% | |
AGGATAGACCCTCAAAGTCA+TGG | + | chr4.4:19889195-19889214 | None:intergenic | 45.0% | |
ATACCTTCTCTTGTGCCCAA+GGG | - | chr4.4:19890453-19890472 | MS.gene35105:CDS | 45.0% | |
GCTTGTCCTACAATAGGTGT+TGG | - | chr4.4:19889376-19889395 | MS.gene35105:CDS | 45.0% | |
GTAAACACCGTCACAGTTGA+TGG | + | chr4.4:19889610-19889629 | None:intergenic | 45.0% | |
TATACCTTCTCTTGTGCCCA+AGG | - | chr4.4:19890452-19890471 | MS.gene35105:CDS | 45.0% | |
TGTCCACCAACACCTATTGT+AGG | + | chr4.4:19889385-19889404 | None:intergenic | 45.0% | |
TGTTCACAAGTGGCAGTATG+TGG | - | chr4.4:19889666-19889685 | MS.gene35105:CDS | 45.0% | |
! | AAAGTTTCCTGAGTTGGGTG+TGG | - | chr4.4:19889831-19889850 | MS.gene35105:CDS | 45.0% |
! | AGAGGTGTGATGATGACAAG+TGG | + | chr4.4:19889097-19889116 | None:intergenic | 45.0% |
! | GAATCTGGAGGCCATGATTT+TGG | + | chr4.4:19889156-19889175 | None:intergenic | 45.0% |
! | TTTTGGGCTATTAGAGGTGG+TGG | - | chr4.4:19889532-19889551 | MS.gene35105:CDS | 45.0% |
!! | TGTCCTACAATAGGTGTTGG+TGG | - | chr4.4:19889379-19889398 | MS.gene35105:CDS | 45.0% |
!! | TTACCAGGTTGATTGGCAAC+AGG | - | chr4.4:19890170-19890189 | MS.gene35105:CDS | 45.0% |
ACTTCAGGCAATGCGCCTTT+CGG | + | chr4.4:19889916-19889935 | None:intergenic | 50.0% | |
ATTGTAGGACAAGCACCAGC+TGG | + | chr4.4:19889370-19889389 | None:intergenic | 50.0% | |
CAGCTGGGAAACCGAGATTT+CGG | + | chr4.4:19889354-19889373 | None:intergenic | 50.0% | |
CTTCCTGTTGCCAATCAACC+TGG | + | chr4.4:19890176-19890195 | None:intergenic | 50.0% | |
GCTGGTGCTTGTCCTACAAT+AGG | - | chr4.4:19889370-19889389 | MS.gene35105:CDS | 50.0% | |
GTTCAGTCTGGTGCAACACT+TGG | - | chr4.4:19889298-19889317 | MS.gene35105:CDS | 50.0% | |
TCCAGATTCGAACCCGTAGT+GGG | - | chr4.4:19889167-19889186 | MS.gene35105:CDS | 50.0% | |
TCTCTAACCACACCCAACTC+AGG | + | chr4.4:19889841-19889860 | None:intergenic | 50.0% | |
TTGGCAACAGGAAGGTGATG+AGG | - | chr4.4:19890182-19890201 | MS.gene35105:CDS | 50.0% | |
TTGTAGGACAAGCACCAGCT+GGG | + | chr4.4:19889369-19889388 | None:intergenic | 50.0% | |
!! | CAGGTTGATTGGCAACAGGA+AGG | - | chr4.4:19890174-19890193 | MS.gene35105:CDS | 50.0% |
AAAGTCATGGCCCCCACTAC+GGG | + | chr4.4:19889182-19889201 | None:intergenic | 55.0% | |
AGTGGGGGCCATGACTTTGA+GGG | - | chr4.4:19889184-19889203 | MS.gene35105:CDS | 55.0% | |
CAAAGTCATGGCCCCCACTA+CGG | + | chr4.4:19889183-19889202 | None:intergenic | 55.0% | |
CACTACGGGTTCGAATCTGG+AGG | + | chr4.4:19889168-19889187 | None:intergenic | 55.0% | |
CAGATTCGAACCCGTAGTGG+GGG | - | chr4.4:19889169-19889188 | MS.gene35105:CDS | 55.0% | |
CCAGATTCGAACCCGTAGTG+GGG | - | chr4.4:19889168-19889187 | MS.gene35105:CDS | 55.0% | |
CGAAATCTCGGTTTCCCAGC+TGG | - | chr4.4:19889352-19889371 | MS.gene35105:CDS | 55.0% | |
CTCCAGATTCGAACCCGTAG+TGG | - | chr4.4:19889166-19889185 | MS.gene35105:CDS | 55.0% | |
GCAACAGGAAGGTGATGAGG+TGG | - | chr4.4:19890185-19890204 | MS.gene35105:CDS | 55.0% | |
TAGTGGGGGCCATGACTTTG+AGG | - | chr4.4:19889183-19889202 | MS.gene35105:CDS | 55.0% | |
TGTCCCTTGGGCACAAGAGA+AGG | + | chr4.4:19890459-19890478 | None:intergenic | 55.0% | |
! | GTTGGTGGACACTTCAGTGG+TGG | - | chr4.4:19889394-19889413 | MS.gene35105:CDS | 55.0% |
! | TGGGCTATTAGAGGTGGTGG+AGG | - | chr4.4:19889535-19889554 | MS.gene35105:CDS | 55.0% |
!! | CACTTCAGTGGTGGTGGCTA+TGG | - | chr4.4:19889403-19889422 | MS.gene35105:CDS | 55.0% |
!! | GGTGTTGGTGGACACTTCAG+TGG | - | chr4.4:19889391-19889410 | MS.gene35105:CDS | 55.0% |
!! | TGGTGGTGGCTATGGAACCT+TGG | - | chr4.4:19889411-19889430 | MS.gene35105:CDS | 55.0% |
!!! | GGTGGTGGAGGAGCAAGTTT+TGG | - | chr4.4:19889547-19889566 | MS.gene35105:CDS | 55.0% |
CCCCACTACGGGTTCGAATC+TGG | + | chr4.4:19889171-19889190 | None:intergenic | 60.0% | |
GGTGGACACTTCAGTGGTGG+TGG | - | chr4.4:19889397-19889416 | MS.gene35105:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 19888857 | 19890485 | 19888857 | ID=MS.gene35105 |
chr4.4 | mRNA | 19888857 | 19890485 | 19888857 | ID=MS.gene35105.t1;Parent=MS.gene35105 |
chr4.4 | exon | 19888857 | 19890485 | 19888857 | ID=MS.gene35105.t1.exon1;Parent=MS.gene35105.t1 |
chr4.4 | CDS | 19888857 | 19890485 | 19888857 | ID=cds.MS.gene35105.t1;Parent=MS.gene35105.t1 |
Gene Sequence |
Protein sequence |