AlfalfaGEDB | MS.gene36437

M. sativa cultivar XinJiangDaYe / MS.gene36437

KEGG: -
GO: GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0008150 GO:0008152 GO:0016491 GO:0036094 GO:0043167 GO:0043168 GO:0048037 GO:0050660 GO:0050662 GO:0055114 GO:0071949 GO:0097159 GO:1901265 GO:1901363
PFAM: PF01565.26 PF08031.15

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36437.t1	XP_013457290.1	93.4	543	20	1	1	527	1	543	2.00E-293	1017.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36437.t1	Q9FI21	53.2	523	229	7	9	519	9	527	8.1e-155	548.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36437.t1	G8A1B3	93.4	543	20	1	1	527	1	543	1.4e-293	1017.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene05015	MS.gene36437	0.801803	7.58E-49	-1.69E-46
MS.gene051341	MS.gene36437	0.802611	5.17E-49	-1.69E-46
MS.gene055942	MS.gene36437	0.808128	3.61E-50	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene28723	MS.gene36437	PPI
MS.gene35114	MS.gene36437	PPI
MS.gene028354	MS.gene36437	PPI
MS.gene36437	MS.gene028346	PPI
MS.gene63532	MS.gene36437	PPI
MS.gene28742	MS.gene36437	PPI
MS.gene047977	MS.gene36437	PPI
MS.gene36437	MS.gene36435	PPI
MS.gene56278	MS.gene36437	PPI
MS.gene51646	MS.gene36437	PPI
MS.gene28726	MS.gene36437	PPI
MS.gene63535	MS.gene36437	PPI
MS.gene028369	MS.gene36437	PPI
MS.gene35083	MS.gene36437	PPI
MS.gene028353	MS.gene36437	PPI
MS.gene36435	MS.gene36437	PPI
MS.gene028352	MS.gene36437	PPI
MS.gene35102	MS.gene36437	PPI
MS.gene36445	MS.gene36437	PPI
MS.gene35103	MS.gene36437	PPI
MS.gene28725	MS.gene36437	PPI
MS.gene36439	MS.gene36437	PPI
MS.gene009479	MS.gene36437	PPI
MS.gene51643	MS.gene36437	PPI
MS.gene35104	MS.gene36437	PPI
MS.gene56279	MS.gene36437	PPI
MS.gene36438	MS.gene36437	PPI
MS.gene28724	MS.gene36437	PPI
MS.gene51644	MS.gene36437	PPI
MS.gene028347	MS.gene36437	PPI
MS.gene35106	MS.gene36437	PPI
MS.gene02146	MS.gene36437	PPI
MS.gene28727	MS.gene36437	PPI
MS.gene35105	MS.gene36437	PPI
MS.gene63533	MS.gene36437	PPI
MS.gene003357	MS.gene36437	PPI
MS.gene35113	MS.gene36437	PPI
MS.gene36437	MS.gene36444	PPI
MS.gene36421	MS.gene36437	PPI
MS.gene009481	MS.gene36437	PPI
MS.gene36437	MS.gene35103	PPI
MS.gene56282	MS.gene36437	PPI
MS.gene28717	MS.gene36437	PPI
MS.gene028357	MS.gene36437	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36437.t1	MTR_4g094488	93.370	543	20	1	1	527	1	543	0.0	1013
MS.gene36437.t1	MTR_4g094495	79.487	546	93	3	1	527	1	546	0.0	872
MS.gene36437.t1	MTR_4g094478	77.799	536	101	2	1	520	1	534	0.0	851
MS.gene36437.t1	MTR_4g094480	77.449	541	108	2	1	527	1	541	0.0	850
MS.gene36437.t1	MTR_4g094492	77.022	544	106	3	1	527	1	542	0.0	844
MS.gene36437.t1	MTR_4g094418	71.198	434	108	2	104	520	1	434	0.0	647
MS.gene36437.t1	MTR_2g031560	52.794	519	231	2	13	519	5	521	0.0	565
MS.gene36437.t1	MTR_2g031390	53.557	506	214	6	30	519	27	527	0.0	563
MS.gene36437.t1	MTR_3g009880	54.876	523	220	7	8	519	1	518	0.0	562
MS.gene36437.t1	MTR_3g009820	53.143	525	229	6	6	519	2	520	0.0	552
MS.gene36437.t1	MTR_3g009760	53.232	526	227	7	6	519	2	520	0.0	550
MS.gene36437.t1	MTR_2g031460	54.373	526	217	6	6	518	9	524	0.0	541
MS.gene36437.t1	MTR_2g031420	54.545	528	211	8	8	519	11	525	0.0	540
MS.gene36437.t1	MTR_2g031590	52.372	527	229	6	11	520	10	531	0.0	540
MS.gene36437.t1	MTR_4g094498	54.000	500	217	3	35	524	41	537	0.0	533
MS.gene36437.t1	MTR_4g094518	54.941	506	207	7	30	519	28	528	0.0	530
MS.gene36437.t1	MTR_4g094520	52.381	525	226	8	10	520	17	531	0.0	525
MS.gene36437.t1	MTR_2g031490	51.154	520	234	5	16	519	21	536	8.68e-174	501
MS.gene36437.t1	MTR_2g031510	50.696	503	228	5	33	519	40	538	7.34e-170	491
MS.gene36437.t1	MTR_4g057990	51.521	526	237	10	6	521	5	522	3.46e-169	489
MS.gene36437.t1	MTR_4g088355	50.784	510	229	6	32	524	32	536	5.41e-169	489
MS.gene36437.t1	MTR_4g091200	49.811	528	242	7	7	521	9	526	7.35e-169	488
MS.gene36437.t1	MTR_4g091190	48.224	535	262	5	1	524	1	531	2.19e-168	487
MS.gene36437.t1	MTR_6g017205	49.812	532	240	7	4	522	10	527	6.21e-167	484
MS.gene36437.t1	MTR_4g094515	50.568	528	245	4	10	524	629	1153	1.69e-166	502
MS.gene36437.t1	MTR_4g094515	49.710	517	236	6	25	521	28	540	2.96e-161	488
MS.gene36437.t1	MTR_4g091150	50.298	503	235	4	31	519	37	538	5.89e-166	481
MS.gene36437.t1	MTR_4g091170	47.639	466	213	4	73	526	101	547	1.62e-150	443
MS.gene36437.t1	MTR_2g023590	48.602	465	226	3	67	520	3	465	5.21e-146	428
MS.gene36437.t1	MTR_1g076830	44.654	477	247	6	57	518	58	532	2.66e-131	393
MS.gene36437.t1	MTR_2g031600	58.943	246	99	1	1	246	1	244	3.98e-90	282
MS.gene36437.t1	MTR_2g031600	52.532	158	72	2	363	520	245	399	2.24e-51	181
MS.gene36437.t1	MTR_3g009850	59.361	219	85	3	302	519	11	226	9.44e-86	265
MS.gene36437.t1	MTR_2g084370	47.748	111	36	2	128	238	1	89	1.56e-31	117
MS.gene36437.t1	MTR_2g084405	58.750	80	33	0	128	207	1	80	9.62e-24	96.3
MS.gene36437.t1	MTR_8g062280	36.893	103	35	3	420	522	4	76	1.12e-12	63.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36437.t1	AT5G44440	53.053	524	230	7	8	519	78	597	0.0	533
MS.gene36437.t1	AT5G44440	53.053	524	230	7	8	519	8	527	0.0	533
MS.gene36437.t1	AT4G20820	51.789	531	232	8	4	519	3	524	0.0	526
MS.gene36437.t1	AT5G44400	49.251	534	249	9	3	519	6	534	3.78e-179	515
MS.gene36437.t1	AT5G44410	51.136	528	238	9	4	519	8	527	1.22e-176	508
MS.gene36437.t1	AT2G34790	48.496	532	242	9	8	522	15	531	1.44e-175	505
MS.gene36437.t1	AT5G44390	47.770	538	257	10	3	520	6	539	9.13e-173	499
MS.gene36437.t1	AT1G30760	49.902	511	229	8	30	522	32	533	8.57e-171	493
MS.gene36437.t1	AT1G30760	49.902	511	229	8	30	522	50	551	1.38e-170	493
MS.gene36437.t1	AT5G44360	49.343	533	251	10	1	519	1	528	8.49e-170	491
MS.gene36437.t1	AT5G44360	49.343	533	251	10	1	519	17	544	1.27e-169	491
MS.gene36437.t1	AT5G44380	49.533	535	249	8	3	519	6	537	1.39e-167	486
MS.gene36437.t1	AT5G44380	49.533	535	249	8	3	519	46	577	3.01e-167	486
MS.gene36437.t1	AT1G30700	49.718	531	245	7	4	519	1	524	6.49e-164	476
MS.gene36437.t1	AT1G11770	46.992	532	263	7	4	520	1	528	3.89e-162	471
MS.gene36437.t1	AT4G20860	49.711	519	229	11	23	519	19	527	5.86e-162	471
MS.gene36437.t1	AT1G30710	47.201	536	253	10	4	519	1	526	2.60e-161	469
MS.gene36437.t1	AT1G30730	46.388	526	259	6	8	519	7	523	1.28e-158	462
MS.gene36437.t1	AT4G20840	47.441	508	250	6	31	525	36	539	1.50e-158	462
MS.gene36437.t1	AT1G26420	46.704	531	260	9	4	519	1	523	5.51e-158	461
MS.gene36437.t1	AT1G34575	46.468	538	260	10	4	524	1	527	2.19e-156	456
MS.gene36437.t1	AT1G26380	47.592	519	246	9	26	527	22	531	3.90e-156	456
MS.gene36437.t1	AT1G26410	47.741	509	244	8	26	519	46	547	4.95e-156	456
MS.gene36437.t1	AT1G26390	47.843	510	244	6	26	519	22	525	6.70e-153	447
MS.gene36437.t1	AT4G20800	47.059	510	252	6	23	519	19	523	1.21e-151	444
MS.gene36437.t1	AT1G26400	44.757	534	272	9	4	522	1	526	4.01e-151	443
MS.gene36437.t1	AT1G30720	46.705	516	254	6	18	519	16	524	7.10e-149	437
MS.gene36437.t1	AT4G20830	46.758	509	252	7	31	525	37	540	8.30e-148	435
MS.gene36437.t1	AT4G20830	46.825	504	249	7	31	520	37	535	1.53e-146	433
MS.gene36437.t1	AT1G01980	46.484	512	252	8	31	524	30	537	5.39e-146	430
MS.gene36437.t1	AT1G30740	45.558	529	263	8	10	520	6	527	1.55e-145	429
MS.gene36437.t1	AT1G30740	45.607	535	265	9	5	520	3	530	1.92e-145	429
MS.gene36437.t1	AT2G34810	44.356	505	265	5	31	519	33	537	1.71e-137	409

Find 109 sgRNAs with CRISPR-Local

Find 125 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCTATAAGCAAGCTAGTATT+TGG	0.193317	4.1:-18861145	MS.gene36437:CDS
ATATTATGGCTGTTTGAATA+TGG	0.219499	4.1:+18862362	None:intergenic
AATCCTTCTAAACCAGTTTC+AGG	0.221499	4.1:+18861470	None:intergenic
GTTTCAAGTGGTTCGCCTTC+TGG	0.231675	4.1:+18861563	None:intergenic
CCTTTGCAAGATAATATTAA+TGG	0.233800	4.1:+18861775	None:intergenic
TAGAAAACTTTATAGTTATA+TGG	0.249330	4.1:-18861255	MS.gene36437:CDS
CAATGGGTGAAGATTTGTTT+TGG	0.263104	4.1:-18861973	MS.gene36437:CDS
CTAATGGTATTGTTTCCTTA+TGG	0.282122	4.1:-18861410	MS.gene36437:CDS
AAACTGGTTTAGAAGGATTA+TGG	0.294935	4.1:-18861466	MS.gene36437:CDS
CGCCTTCTGGAAACCGAAAA+AGG	0.314622	4.1:+18861576	None:intergenic
ATTCCTGAAACTGGTTTAGA+AGG	0.316827	4.1:-18861473	MS.gene36437:CDS
CACTTCAGTGGTGGTGGATA+TGG	0.317127	4.1:-18862085	MS.gene36437:CDS
TCTAAACCAGTTTCAGGAAT+AGG	0.319812	4.1:+18861476	None:intergenic
AATTATAGAGACCTTGATAT+TGG	0.322332	4.1:-18861194	MS.gene36437:CDS
AAAATTCCTATTCCTGAAAC+TGG	0.323303	4.1:-18861482	MS.gene36437:CDS
AATTTGCATGCCATGGTATT+GGG	0.330784	4.1:+18862336	None:intergenic
TCATTTCTGAAGAAGTTTAG+AGG	0.331220	4.1:+18861062	None:intergenic
GGTGGTGGAGGAGCTAGTTT+TGG	0.332734	4.1:-18861941	MS.gene36437:CDS
AAATAACCTCTTACCCTTGA+TGG	0.335087	4.1:-18861672	MS.gene36437:CDS
ATTGGTGTGAATAACATTAA+TGG	0.335537	4.1:-18861176	MS.gene36437:CDS
ATTCCATTTCCACATAGATA+TGG	0.343229	4.1:-18861356	MS.gene36437:CDS
GAATTTGCATGCCATGGTAT+TGG	0.356078	4.1:+18862335	None:intergenic
TATTGATGAGTAAGAGGAAT+TGG	0.362717	4.1:+18862468	None:intergenic
GGAACCTTGTTGCGTAAATA+TGG	0.364610	4.1:-18862064	MS.gene36437:CDS
GTGATAATGACAAGGGGTTT+TGG	0.366819	4.1:+18862400	None:intergenic
CTATAAGCAAGCTAGTATTT+GGG	0.368691	4.1:-18861144	MS.gene36437:CDS
TGGAGAAGTTGCACATCAAT+TGG	0.370174	4.1:-18861280	MS.gene36437:CDS
CTTGGAGACTTTGAAACAAA+AGG	0.375011	4.1:+18861230	None:intergenic
AAAGTTTCCTGAACTTGGTT+TGG	0.379762	4.1:-18861645	MS.gene36437:CDS
CAAGAACAACTTCAAAAGAT+TGG	0.382060	4.1:-18861108	MS.gene36437:CDS
TATTATGGCTGTTTGAATAT+GGG	0.383055	4.1:+18862363	None:intergenic
GTTTCCTTATGGTGGCATAA+TGG	0.388858	4.1:-18861399	MS.gene36437:CDS
GTTCCATATCTATGTGGAAA+TGG	0.394166	4.1:+18861353	None:intergenic
GAAATTCTATTTGCGTCCCT+TGG	0.394677	4.1:+18861016	None:intergenic
AACAAAATCAGATTTCGCTT+TGG	0.405207	4.1:+18861505	None:intergenic
GTAAACACCGTCACAGTTGA+TGG	0.407633	4.1:+18861881	None:intergenic
ATTGAGTATTGATGAGTAAG+AGG	0.417579	4.1:+18862462	None:intergenic
GTGAGCATCAATGATGTTAT+CGG	0.419983	4.1:+18862033	None:intergenic
AAAACTCTTGGTTTCCCTGC+AGG	0.420339	4.1:-18862136	MS.gene36437:CDS
TCTCTAACCAAACCAAGTTC+AGG	0.420493	4.1:+18861638	None:intergenic
TTTCTTCCATCAAGGGTAAG+AGG	0.424421	4.1:+18861666	None:intergenic
AAAACTGCTTGGGTTCAATC+TGG	0.435993	4.1:-18862202	MS.gene36437:CDS
GAAGAAAAGTTTCCTGAACT+TGG	0.447161	4.1:-18861650	MS.gene36437:CDS
AGCCAAGAAAGCAAAACTCT+TGG	0.456316	4.1:-18862148	MS.gene36437:CDS
TAATTAATATATGCAGCTCT+TGG	0.463039	4.1:+18861212	None:intergenic
TGAGTAAGAGGAATTGGTTT+TGG	0.465050	4.1:+18862474	None:intergenic
AAGATTGTGTTGAAATGAGT+TGG	0.466692	4.1:-18861616	MS.gene36437:CDS
GTGAGATCAATGATGACAAA+AGG	0.482657	4.1:+18862259	None:intergenic
ATGGTATTGGGAACATATTA+TGG	0.482678	4.1:+18862348	None:intergenic
TGTTATTCACACCAATATCA+AGG	0.485733	4.1:+18861183	None:intergenic
TGGGCTATTAGAGGTGGTGG+AGG	0.490480	4.1:-18861953	MS.gene36437:CDS
TGTAGAAAACAAAACTGCTT+GGG	0.493208	4.1:-18862212	MS.gene36437:CDS
TGGTGCGGAAGAGGTACTAA+TGG	0.495510	4.1:-18861426	MS.gene36437:CDS
TTATCCATTATGCCACCATA+AGG	0.506968	4.1:+18861395	None:intergenic
GAAGTTTAGAGGATCAACTT+TGG	0.511187	4.1:+18861073	None:intergenic
TTTCTTTGGTTGCAAATCTG+AGG	0.511786	4.1:+18862425	None:intergenic
TGAAATGAGTTGGATTGAAT+CGG	0.514164	4.1:-18861606	MS.gene36437:CDS
ACAGTAGGACAAACACCTGC+AGG	0.514616	4.1:+18862121	None:intergenic
ATGGTATTGTTTCCTTATGG+TGG	0.522116	4.1:-18861407	MS.gene36437:CDS
TAGCGGTGGCCATGACTTCG+AGG	0.526765	4.1:-18862305	MS.gene36437:CDS
TTTCTTGACAAAGAAGCAAT+GGG	0.528413	4.1:-18861989	MS.gene36437:CDS
TGGCCTATGTTTGATGAAGA+TGG	0.529049	4.1:-18861446	MS.gene36437:CDS
CTGTTGAGCAACGTTTCAAG+TGG	0.530743	4.1:+18861551	None:intergenic
TGTCCTACTGTAGGTGTTGG+TGG	0.531106	4.1:-18862109	MS.gene36437:CDS
ATGTAGAAAACAAAACTGCT+TGG	0.538313	4.1:-18862213	MS.gene36437:CDS
GTTTACTGTTCCAAGAACAT+TGG	0.538372	4.1:-18861864	MS.gene36437:CDS
AATAACTATAGAGACATTGA+AGG	0.539077	4.1:+18862533	None:intergenic
GCAGGTGTTTGTCCTACTGT+AGG	0.539536	4.1:-18862118	MS.gene36437:CDS
AGGATAGACCCTCGAAGTCA+TGG	0.545471	4.1:+18862296	None:intergenic
GTTTGTCCTACTGTAGGTGT+TGG	0.546834	4.1:-18862112	MS.gene36437:CDS
CGTCCCTTGGACACATGAGA+AGG	0.549392	4.1:+18861029	None:intergenic
TGAATATGGGAAATTTGTGT+AGG	0.551742	4.1:+18862376	None:intergenic
GTTTCTTGACAAAGAAGCAA+TGG	0.553824	4.1:-18861990	MS.gene36437:CDS
TGATGAAGATGGTGCGGAAG+AGG	0.557116	4.1:-18861435	MS.gene36437:CDS
GTTCAATCTGGTGCAACGCT+TGG	0.557989	4.1:-18862190	MS.gene36437:CDS
CAACAGAACACTAGCTGCAA+AGG	0.565270	4.1:-18861534	MS.gene36437:CDS
GGTGGACACTTCAGTGGTGG+TGG	0.566542	4.1:-18862091	MS.gene36437:CDS
TATACCTTCTCATGTGTCCA+AGG	0.569407	4.1:-18861033	MS.gene36437:CDS
TATAAGGTTCCATATCTATG+TGG	0.572757	4.1:+18861347	None:intergenic
CCATTAATATTATCTTGCAA+AGG	0.573285	4.1:-18861775	MS.gene36437:CDS
AAATTCAGTATGCAGTGCAC+TGG	0.574982	4.1:-18861322	MS.gene36437:CDS
CAACAAAGCTTGTTCACAAG+TGG	0.578289	4.1:-18861832	MS.gene36437:CDS
ACATAATTGATGTGAAAGGT+AGG	0.586594	4.1:-18862012	MS.gene36437:CDS
AAGACCATATTTACGCAACA+AGG	0.597900	4.1:+18862060	None:intergenic
TGAAGGAAATTATCTTCATG+AGG	0.599496	4.1:+18862550	None:intergenic
GCACCATCTTCATCAAACAT+AGG	0.602030	4.1:+18861443	None:intergenic
GAATTCGAATTTGCATGCCA+TGG	0.608563	4.1:+18862329	None:intergenic
CAAATTCGAATTCGTAGCGG+TGG	0.611749	4.1:-18862319	MS.gene36437:CDS
GCATCAAGAAGGTGATGAGG+TGG	0.615161	4.1:-18861300	MS.gene36437:CDS
TATAAGCAAGCTAGTATTTG+GGG	0.624423	4.1:-18861143	MS.gene36437:CDS
TCAAGTTCCATCAACTGTGA+CGG	0.625682	4.1:-18861888	MS.gene36437:CDS
GTTGGTGGACACTTCAGTGG+TGG	0.625730	4.1:-18862094	MS.gene36437:CDS
GCAGTGCACTGGCATCAAGA+AGG	0.625900	4.1:-18861311	MS.gene36437:CDS
AGCGGTGGCCATGACTTCGA+GGG	0.627631	4.1:-18862304	MS.gene36437:CDS
GATTTAAATTCAAGTAAACA+AGG	0.630011	4.1:-18861749	MS.gene36437:intron
GTTGCGTAAATATGGTCTTG+CGG	0.634179	4.1:-18862056	MS.gene36437:CDS
GGTGTTGGTGGACACTTCAG+TGG	0.638405	4.1:-18862097	MS.gene36437:CDS
TGTAGGTGTGATAATGACAA+GGG	0.641156	4.1:+18862393	None:intergenic
CAGTAGGACAAACACCTGCA+GGG	0.647987	4.1:+18862122	None:intergenic
ATACCTTCTCATGTGTCCAA+GGG	0.652262	4.1:-18861032	MS.gene36437:CDS
ATAATATGTTCCCAATACCA+TGG	0.654114	4.1:-18862346	MS.gene36437:CDS
GCTCACATAATTGATGTGAA+AGG	0.660187	4.1:-18862016	MS.gene36437:CDS
TGTCCACCAACACCTACAGT+AGG	0.663218	4.1:+18862106	None:intergenic
GTGTAGGTGTGATAATGACA+AGG	0.686955	4.1:+18862392	None:intergenic
CTGGCATCAAGAAGGTGATG+AGG	0.689653	4.1:-18861303	MS.gene36437:CDS
TATGTTTGATGAAGATGGTG+CGG	0.701729	4.1:-18861441	MS.gene36437:CDS
ATTGTCAAATATGAGCGTAG+AGG	0.702224	4.1:+18862625	None:intergenic
GTAGGTGTGATAATGACAAG+GGG	0.735299	4.1:+18862394	None:intergenic
ATGCAAATTCGAATTCGTAG+CGG	0.744504	4.1:-18862322	MS.gene36437:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAGAAAACTTTATAGTTATA+TGG	-	chr4.1:18862398-18862417	MS.gene36437:CDS	15.0%
!!	GATTTAAATTCAAGTAAACA+AGG	-	chr4.1:18861904-18861923	MS.gene36437:CDS	20.0%
!	AATAACTATAGAGACATTGA+AGG	+	chr4.1:18861123-18861142	None:intergenic	25.0%
!	AATTATAGAGACCTTGATAT+TGG	-	chr4.1:18862459-18862478	MS.gene36437:CDS	25.0%
!	ATATTATGGCTGTTTGAATA+TGG	+	chr4.1:18861294-18861313	None:intergenic	25.0%
!	ATTGGTGTGAATAACATTAA+TGG	-	chr4.1:18862477-18862496	MS.gene36437:CDS	25.0%
!	CCATTAATATTATCTTGCAA+AGG	-	chr4.1:18861878-18861897	MS.gene36437:CDS	25.0%
!	CCTTTGCAAGATAATATTAA+TGG	+	chr4.1:18861881-18861900	None:intergenic	25.0%
!	TAATTAATATATGCAGCTCT+TGG	+	chr4.1:18862444-18862463	None:intergenic	25.0%
!	TATTATGGCTGTTTGAATAT+GGG	+	chr4.1:18861293-18861312	None:intergenic	25.0%
!!	TGCATACTGAATTTTGTATA+AGG	+	chr4.1:18862325-18862344	None:intergenic	25.0%
!!	TTATTTCAATCCTTGTTTCT+AGG	-	chr4.1:18861952-18861971	MS.gene36437:CDS	25.0%
!!!	AAAAGGAACTTTTGAAACAA+AGG	+	chr4.1:18861380-18861399	None:intergenic	25.0%
	AAAATTCCTATTCCTGAAAC+TGG	-	chr4.1:18862171-18862190	MS.gene36437:CDS	30.0%
	AACAAAATCAGATTTCGCTT+TGG	+	chr4.1:18862151-18862170	None:intergenic	30.0%
	AAGATTGTGTTGAAATGAGT+TGG	-	chr4.1:18862037-18862056	MS.gene36437:CDS	30.0%
	ACATAATTGATGTGAAAGGT+AGG	-	chr4.1:18861641-18861660	MS.gene36437:CDS	30.0%
	ATAATATGTTCCCAATACCA+TGG	-	chr4.1:18861307-18861326	MS.gene36437:CDS	30.0%
	ATGTAGAAAACAAAACTGCT+TGG	-	chr4.1:18861440-18861459	MS.gene36437:CDS	30.0%
	ATTCCATTTCCACATAGATA+TGG	-	chr4.1:18862297-18862316	MS.gene36437:CDS	30.0%
	ATTTACACTTCCTAGAAACA+AGG	+	chr4.1:18861965-18861984	None:intergenic	30.0%
	CAAGAACAACTTCAAAAGAT+TGG	-	chr4.1:18862545-18862564	MS.gene36437:CDS	30.0%
	CTAATGGTATTGTTTCCTTA+TGG	-	chr4.1:18862243-18862262	MS.gene36437:CDS	30.0%
	CTATAAGCAAGCTAGTATTT+GGG	-	chr4.1:18862509-18862528	MS.gene36437:CDS	30.0%
	TATAAGCAAGCTAGTATTTG+GGG	-	chr4.1:18862510-18862529	MS.gene36437:CDS	30.0%
	TATAAGGTTCCATATCTATG+TGG	+	chr4.1:18862309-18862328	None:intergenic	30.0%
	TATTGATGAGTAAGAGGAAT+TGG	+	chr4.1:18861188-18861207	None:intergenic	30.0%
	TGAAGGAAATTATCTTCATG+AGG	+	chr4.1:18861106-18861125	None:intergenic	30.0%
	TGAATATGGGAAATTTGTGT+AGG	+	chr4.1:18861280-18861299	None:intergenic	30.0%
	TGTAGAAAACAAAACTGCTT+GGG	-	chr4.1:18861441-18861460	MS.gene36437:CDS	30.0%
	TGTTATTCACACCAATATCA+AGG	+	chr4.1:18862473-18862492	None:intergenic	30.0%
	TTTCTTGACAAAGAAGCAAT+GGG	-	chr4.1:18861664-18861683	MS.gene36437:CDS	30.0%
!	AAACTGGTTTAGAAGGATTA+TGG	-	chr4.1:18862187-18862206	MS.gene36437:CDS	30.0%
!	ATGGTATTGGGAACATATTA+TGG	+	chr4.1:18861308-18861327	None:intergenic	30.0%
!	TCATTTCTGAAGAAGTTTAG+AGG	+	chr4.1:18862594-18862613	None:intergenic	30.0%
!	TGAAATGAGTTGGATTGAAT+CGG	-	chr4.1:18862047-18862066	MS.gene36437:CDS	30.0%
!!	AATCGGTTCTTTACCTTTTT+CGG	-	chr4.1:18862064-18862083	MS.gene36437:CDS	30.0%
!!	AATGGGTGAAGATTTGTTTT+GGG	-	chr4.1:18861681-18861700	MS.gene36437:CDS	30.0%
!!	ATTGAGTATTGATGAGTAAG+AGG	+	chr4.1:18861194-18861213	None:intergenic	30.0%
	AAAGTTTCCTGAACTTGGTT+TGG	-	chr4.1:18862008-18862027	MS.gene36437:CDS	35.0%
	AAATAACCTCTTACCCTTGA+TGG	-	chr4.1:18861981-18862000	MS.gene36437:CDS	35.0%
	AAGACCATATTTACGCAACA+AGG	+	chr4.1:18861596-18861615	None:intergenic	35.0%
	AATCCTTCTAAACCAGTTTC+AGG	+	chr4.1:18862186-18862205	None:intergenic	35.0%
	AATTTGCATGCCATGGTATT+GGG	+	chr4.1:18861320-18861339	None:intergenic	35.0%
	ATGCAAATTCGAATTCGTAG+CGG	-	chr4.1:18861331-18861350	MS.gene36437:CDS	35.0%
	ATGGTATTGTTTCCTTATGG+TGG	-	chr4.1:18862246-18862265	MS.gene36437:CDS	35.0%
	ATTGTCAAATATGAGCGTAG+AGG	+	chr4.1:18861031-18861050	None:intergenic	35.0%
	GAAGAAAAGTTTCCTGAACT+TGG	-	chr4.1:18862003-18862022	MS.gene36437:CDS	35.0%
	GAAGTTTAGAGGATCAACTT+TGG	+	chr4.1:18862583-18862602	None:intergenic	35.0%
	GCTATAAGCAAGCTAGTATT+TGG	-	chr4.1:18862508-18862527	MS.gene36437:CDS	35.0%
	GCTCACATAATTGATGTGAA+AGG	-	chr4.1:18861637-18861656	MS.gene36437:CDS	35.0%
	GTGAGATCAATGATGACAAA+AGG	+	chr4.1:18861397-18861416	None:intergenic	35.0%
	GTGAGCATCAATGATGTTAT+CGG	+	chr4.1:18861623-18861642	None:intergenic	35.0%
	GTTCCATATCTATGTGGAAA+TGG	+	chr4.1:18862303-18862322	None:intergenic	35.0%
	GTTTACTGTTCCAAGAACAT+TGG	-	chr4.1:18861789-18861808	MS.gene36437:CDS	35.0%
	GTTTCTTGACAAAGAAGCAA+TGG	-	chr4.1:18861663-18861682	MS.gene36437:CDS	35.0%
	TATGTTTGATGAAGATGGTG+CGG	-	chr4.1:18862212-18862231	MS.gene36437:CDS	35.0%
	TCTAAACCAGTTTCAGGAAT+AGG	+	chr4.1:18862180-18862199	None:intergenic	35.0%
	TTATCCATTATGCCACCATA+AGG	+	chr4.1:18862261-18862280	None:intergenic	35.0%
	TTTCTTTGGTTGCAAATCTG+AGG	+	chr4.1:18861231-18861250	None:intergenic	35.0%
!	AACCAAGAGTTTTGCTTTCT+TGG	+	chr4.1:18861510-18861529	None:intergenic	35.0%
!	AGGAAACTTTTCTTCCATCA+AGG	+	chr4.1:18861998-18862017	None:intergenic	35.0%
!	ATTCCTGAAACTGGTTTAGA+AGG	-	chr4.1:18862180-18862199	MS.gene36437:CDS	35.0%
!	GCATTTTGTTCCAATGTTCT+TGG	+	chr4.1:18861802-18861821	None:intergenic	35.0%
!	GGAAACTTTTCTTCCATCAA+GGG	+	chr4.1:18861997-18862016	None:intergenic	35.0%
!	TGTAGGTGTGATAATGACAA+GGG	+	chr4.1:18861263-18861282	None:intergenic	35.0%
!!	AAAGCTAGTACTGTTGACTT+TGG	+	chr4.1:18861934-18861953	None:intergenic	35.0%
!!	CAATGGGTGAAGATTTGTTT+TGG	-	chr4.1:18861680-18861699	MS.gene36437:CDS	35.0%
!!	CTTGGAGACTTTGAAACAAA+AGG	+	chr4.1:18862426-18862445	None:intergenic	35.0%
!!	TGAGTAAGAGGAATTGGTTT+TGG	+	chr4.1:18861182-18861201	None:intergenic	35.0%
!!!	GATTTGTTTTGGGCTATTAG+AGG	-	chr4.1:18861691-18861710	MS.gene36437:intron	35.0%
!!!	GTTTTGGTGTCATAGTTTCA+TGG	-	chr4.1:18861728-18861747	MS.gene36437:intron	35.0%
	AAAACTGCTTGGGTTCAATC+TGG	-	chr4.1:18861451-18861470	MS.gene36437:CDS	40.0%
	AAATTCAGTATGCAGTGCAC+TGG	-	chr4.1:18862331-18862350	MS.gene36437:CDS	40.0%
	AGCCAAGAAAGCAAAACTCT+TGG	-	chr4.1:18861505-18861524	MS.gene36437:CDS	40.0%
	ATACCTTCTCATGTGTCCAA+GGG	-	chr4.1:18862621-18862640	MS.gene36437:CDS	40.0%
	GAATTCGAATTTGCATGCCA+TGG	+	chr4.1:18861327-18861346	None:intergenic	40.0%
	GAATTTGCATGCCATGGTAT+TGG	+	chr4.1:18861321-18861340	None:intergenic	40.0%
	GCACCATCTTCATCAAACAT+AGG	+	chr4.1:18862213-18862232	None:intergenic	40.0%
	GGAACCTTGTTGCGTAAATA+TGG	-	chr4.1:18861589-18861608	MS.gene36437:CDS	40.0%
	GTTTCCTTATGGTGGCATAA+TGG	-	chr4.1:18862254-18862273	MS.gene36437:CDS	40.0%
	TATACCTTCTCATGTGTCCA+AGG	-	chr4.1:18862620-18862639	MS.gene36437:CDS	40.0%
	TCAAGTTCCATCAACTGTGA+CGG	-	chr4.1:18861765-18861784	MS.gene36437:CDS	40.0%
	TCTCTAACCAAACCAAGTTC+AGG	+	chr4.1:18862018-18862037	None:intergenic	40.0%
	TGGAGAAGTTGCACATCAAT+TGG	-	chr4.1:18862373-18862392	MS.gene36437:CDS	40.0%
	TGGCCTATGTTTGATGAAGA+TGG	-	chr4.1:18862207-18862226	MS.gene36437:CDS	40.0%
	TTTCTTCCATCAAGGGTAAG+AGG	+	chr4.1:18861990-18862009	None:intergenic	40.0%
!	CAACAAAGCTTGTTCACAAG+TGG	-	chr4.1:18861821-18861840	MS.gene36437:CDS	40.0%
!	GTAGGTGTGATAATGACAAG+GGG	+	chr4.1:18861262-18861281	None:intergenic	40.0%
!	GTGTAGGTGTGATAATGACA+AGG	+	chr4.1:18861264-18861283	None:intergenic	40.0%
!	GTTGCGTAAATATGGTCTTG+CGG	-	chr4.1:18861597-18861616	MS.gene36437:CDS	40.0%
!!	GTGATAATGACAAGGGGTTT+TGG	+	chr4.1:18861256-18861275	None:intergenic	40.0%
!!!	AAGGGGTTTTGGTGTTTCTT+TGG	+	chr4.1:18861245-18861264	None:intergenic	40.0%
!!!	TACCTTTTTCGGTTTCCAGA+AGG	-	chr4.1:18862075-18862094	MS.gene36437:CDS	40.0%
!!!	TTGTTTTGGGCTATTAGAGG+TGG	-	chr4.1:18861694-18861713	MS.gene36437:intron	40.0%
	AAAACTCTTGGTTTCCCTGC+AGG	-	chr4.1:18861517-18861536	MS.gene36437:CDS	45.0%
	CAAATTCGAATTCGTAGCGG+TGG	-	chr4.1:18861334-18861353	MS.gene36437:CDS	45.0%
	CAACAGAACACTAGCTGCAA+AGG	-	chr4.1:18862119-18862138	MS.gene36437:CDS	45.0%
	CTGTTGAGCAACGTTTCAAG+TGG	+	chr4.1:18862105-18862124	None:intergenic	45.0%
	GTAAACACCGTCACAGTTGA+TGG	+	chr4.1:18861775-18861794	None:intergenic	45.0%
	GTTTGTCCTACTGTAGGTGT+TGG	-	chr4.1:18861541-18861560	MS.gene36437:CDS	45.0%
!	TTTTGGGCTATTAGAGGTGG+TGG	-	chr4.1:18861697-18861716	MS.gene36437:intron	45.0%
	ACAGTAGGACAAACACCTGC+AGG	+	chr4.1:18861535-18861554	None:intergenic	50.0%
	AGGATAGACCCTCGAAGTCA+TGG	+	chr4.1:18861360-18861379	None:intergenic	50.0%
	CAGTAGGACAAACACCTGCA+GGG	+	chr4.1:18861534-18861553	None:intergenic	50.0%
	CTGGCATCAAGAAGGTGATG+AGG	-	chr4.1:18862350-18862369	MS.gene36437:CDS	50.0%
	GCAGGTGTTTGTCCTACTGT+AGG	-	chr4.1:18861535-18861554	MS.gene36437:CDS	50.0%
	GCATCAAGAAGGTGATGAGG+TGG	-	chr4.1:18862353-18862372	MS.gene36437:CDS	50.0%
	GTTCAATCTGGTGCAACGCT+TGG	-	chr4.1:18861463-18861482	MS.gene36437:CDS	50.0%
	TGATGAAGATGGTGCGGAAG+AGG	-	chr4.1:18862218-18862237	MS.gene36437:CDS	50.0%
	TGTCCACCAACACCTACAGT+AGG	+	chr4.1:18861550-18861569	None:intergenic	50.0%
!	CGCCTTCTGGAAACCGAAAA+AGG	+	chr4.1:18862080-18862099	None:intergenic	50.0%
!	GTTTCAAGTGGTTCGCCTTC+TGG	+	chr4.1:18862093-18862112	None:intergenic	50.0%
!!	CACTTCAGTGGTGGTGGATA+TGG	-	chr4.1:18861568-18861587	MS.gene36437:CDS	50.0%
!!	TGGTGCGGAAGAGGTACTAA+TGG	-	chr4.1:18862227-18862246	MS.gene36437:CDS	50.0%
!!	TGTCCTACTGTAGGTGTTGG+TGG	-	chr4.1:18861544-18861563	MS.gene36437:CDS	50.0%
	CGTCCCTTGGACACATGAGA+AGG	+	chr4.1:18862627-18862646	None:intergenic	55.0%
!	GCAGTGCACTGGCATCAAGA+AGG	-	chr4.1:18862342-18862361	MS.gene36437:CDS	55.0%
!	GTTGGTGGACACTTCAGTGG+TGG	-	chr4.1:18861559-18861578	MS.gene36437:CDS	55.0%
!	TGGGCTATTAGAGGTGGTGG+AGG	-	chr4.1:18861700-18861719	MS.gene36437:intron	55.0%
!!	GGTGTTGGTGGACACTTCAG+TGG	-	chr4.1:18861556-18861575	MS.gene36437:CDS	55.0%
!!!	GGTGGTGGAGGAGCTAGTTT+TGG	-	chr4.1:18861712-18861731	MS.gene36437:intron	55.0%
	AGCGGTGGCCATGACTTCGA+GGG	-	chr4.1:18861349-18861368	MS.gene36437:CDS	60.0%
	GGTGGACACTTCAGTGGTGG+TGG	-	chr4.1:18861562-18861581	MS.gene36437:CDS	60.0%
	TAGCGGTGGCCATGACTTCG+AGG	-	chr4.1:18861348-18861367	MS.gene36437:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	18861022	18862653	18861022	ID=MS.gene36437
chr4.1	mRNA	18861022	18862653	18861022	ID=MS.gene36437.t1;Parent=MS.gene36437
chr4.1	exon	18861750	18862653	18861750	ID=MS.gene36437.t1.exon1;Parent=MS.gene36437.t1
chr4.1	CDS	18861750	18862653	18861750	ID=cds.MS.gene36437.t1;Parent=MS.gene36437.t1
chr4.1	exon	18861022	18861701	18861022	ID=MS.gene36437.t1.exon2;Parent=MS.gene36437.t1
chr4.1	CDS	18861022	18861701	18861022	ID=cds.MS.gene36437.t1;Parent=MS.gene36437.t1

Gene Sequence

>MS.gene36437

ATGACGCCTCTACGCTCATATTTGACAATTGTACTAATAGCAATTGTATTTTCATATACATCTTCTGCAATTGATACAAGTCCTCATGAAGATAATTTCCTTCAATGTCTCTATAGTTATTCACATAACTCAACTTCAATCTCTAAAGTTGTGTACACCAAAACCAATTCCTCTTACTCATCAATACTCAATTTTTCAATTCAAAACCTCAGATTTGCAACCAAAGAAACACCAAAACCCCTTGTCATTATCACACCTACACAAATTTCCCATATTCAAACAGCCATAATATGTTCCCAATACCATGGCATGCAAATTCGAATTCGTAGCGGTGGCCATGACTTCGAGGGTCTATCCTTTGTTTCAAAAGTTCCTTTTGTCATCATTGATCTCACAAACTTTAGAGAAATTGATGTAGATGTAGAAAACAAAACTGCTTGGGTTCAATCTGGTGCAACGCTTGGTGAACTTTACTACAAAATTAGCCAAGAAAGCAAAACTCTTGGTTTCCCTGCAGGTGTTTGTCCTACTGTAGGTGTTGGTGGACACTTCAGTGGTGGTGGATATGGAACCTTGTTGCGTAAATATGGTCTTGCGGCCGATAACATCATTGATGCTCACATAATTGATGTGAAAGGTAGGTTTCTTGACAAAGAAGCAATGGGTGAAGATTTGTTTTGGGCTATTAGAGGTGGTGGAGGAGCTAGTTTTGGTGTCATAGTTTCATGGAAGATTAAACTTGTTCAAGTTCCATCAACTGTGACGGTGTTTACTGTTCCAAGAACATTGGAACAAAATGCAACAAAGCTTGTTCACAAGTGGCAGTTTGTAGCTCATAAACTTGAAGAAAACTTAGCCATTAATATTATCTTGCAAAGGCTAGATTTAAATTCAAGTAAACAAGGTGAGCCAAAGTCAACAGTACTAGCTTTATTTCAATCCTTGTTTCTAGGAAGTGTAAATAACCTCTTACCCTTGATGGAAGAAAAGTTTCCTGAACTTGGTTTGGTTAGAGAAGATTGTGTTGAAATGAGTTGGATTGAATCGGTTCTTTACCTTTTTCGGTTTCCAGAAGGCGAACCACTTGAAACGTTGCTCAACAGAACACTAGCTGCAAAGGATAATTCCAAAGCGAAATCTGATTTTGTTAAAATTCCTATTCCTGAAACTGGTTTAGAAGGATTATGGCCTATGTTTGATGAAGATGGTGCGGAAGAGGTACTAATGGTATTGTTTCCTTATGGTGGCATAATGGATAAGATTTCAGAATCTGAAATTCCATTTCCACATAGATATGGAACCTTATACAAAATTCAGTATGCAGTGCACTGGCATCAAGAAGGTGATGAGGTGGAGAAGTTGCACATCAATTGGATTAGAAAACTTTATAGTTATATGGAACCTTTTGTTTCAAAGTCTCCAAGAGCTGCATATATTAATTATAGAGACCTTGATATTGGTGTGAATAACATTAATGGATACACAAGCTATAAGCAAGCTAGTATTTGGGGTGTTAAATACTTCAAGAACAACTTCAAAAGATTGGCAAAAGTGAAGACCAAAGTTGATCCTCTAAACTTCTTCAGAAATGAACAGAGTATACCTTCTCATGTGTCCAAGGGACGCAAATAG

Protein sequence

>MS.gene36437.t1

MTPLRSYLTIVLIAIVFSYTSSAIDTSPHEDNFLQCLYSYSHNSTSISKVVYTKTNSSYSSILNFSIQNLRFATKETPKPLVIITPTQISHIQTAIICSQYHGMQIRIRSGGHDFEGLSFVSKVPFVIIDLTNFREIDVDVENKTAWVQSGATLGELYYKISQESKTLGFPAGVCPTVGVGGHFSGGGYGTLLRKYGLAADNIIDAHIIDVKGRFLDKEAMGEDLFWAIRGGGGASFGVIVSWKIKLVQVPSTVTVFTVPRTLEQNATKLVHKWQFVAHKLEENLAINIILQRLDLNSSKQGSVNNLLPLMEEKFPELGLVREDCVEMSWIESVLYLFRFPEGEPLETLLNRTLAAKDNSKAKSDFVKIPIPETGLEGLWPMFDEDGAEEVLMVLFPYGGIMDKISESEIPFPHRYGTLYKIQYAVHWHQEGDEVEKLHINWIRKLYSYMEPFVSKSPRAAYINYRDLDIGVNNINGYTSYKQASIWGVKYFKNNFKRLAKVKTKVDPLNFFRNEQSIPSHVSKGRK