Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72347.t1 | XP_003608656.1 | 98.3 | 235 | 4 | 0 | 1 | 235 | 1 | 235 | 2.20E-127 | 464.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72347.t1 | Q8GWE1 | 73.5 | 234 | 59 | 2 | 1 | 231 | 1 | 234 | 3.6e-94 | 345.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72347.t1 | G7JHN2 | 98.3 | 235 | 4 | 0 | 1 | 235 | 1 | 235 | 1.6e-127 | 464.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene72347 | 0.810783 | 9.71E-51 | -1.69E-46 |
| MS.gene049159 | MS.gene72347 | 0.808705 | 2.72E-50 | -1.69E-46 |
| MS.gene049254 | MS.gene72347 | 0.821618 | 3.67E-53 | -1.69E-46 |
| MS.gene049341 | MS.gene72347 | 0.800286 | 1.55E-48 | -1.69E-46 |
| MS.gene049343 | MS.gene72347 | 0.821501 | 3.90E-53 | -1.69E-46 |
| MS.gene049501 | MS.gene72347 | 0.830431 | 2.95E-55 | -1.69E-46 |
| MS.gene049672 | MS.gene72347 | 0.806322 | 8.70E-50 | -1.69E-46 |
| MS.gene049824 | MS.gene72347 | 0.812191 | 4.80E-51 | -1.69E-46 |
| MS.gene049825 | MS.gene72347 | 0.832892 | 7.29E-56 | -1.69E-46 |
| MS.gene049850 | MS.gene72347 | 0.827649 | 1.39E-54 | -1.69E-46 |
| MS.gene049873 | MS.gene72347 | 0.858488 | 7.96E-63 | -1.69E-46 |
| MS.gene050156 | MS.gene72347 | 0.820022 | 8.54E-53 | -1.69E-46 |
| MS.gene050303 | MS.gene72347 | 0.826838 | 2.18E-54 | -1.69E-46 |
| MS.gene050355 | MS.gene72347 | 0.803957 | 2.72E-49 | -1.69E-46 |
| MS.gene05045 | MS.gene72347 | 0.81854 | 1.86E-52 | -1.69E-46 |
| MS.gene050559 | MS.gene72347 | 0.8102 | 1.30E-50 | -1.69E-46 |
| MS.gene050561 | MS.gene72347 | 0.814342 | 1.62E-51 | -1.69E-46 |
| MS.gene050719 | MS.gene72347 | 0.822942 | 1.81E-53 | -1.69E-46 |
| MS.gene050721 | MS.gene72347 | 0.822133 | 2.79E-53 | -1.69E-46 |
| MS.gene050724 | MS.gene72347 | 0.817303 | 3.54E-52 | -1.69E-46 |
| MS.gene050780 | MS.gene72347 | 0.803357 | 3.62E-49 | -1.69E-46 |
| MS.gene050799 | MS.gene72347 | 0.812314 | 4.51E-51 | -1.69E-46 |
| MS.gene050844 | MS.gene72347 | 0.825134 | 5.53E-54 | -1.69E-46 |
| MS.gene050901 | MS.gene72347 | 0.801329 | 9.48E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene72347 | 0.857003 | 2.19E-62 | -1.69E-46 |
| MS.gene051265 | MS.gene72347 | 0.800489 | 1.41E-48 | -1.69E-46 |
| MS.gene05134 | MS.gene72347 | 0.807263 | 5.51E-50 | -1.69E-46 |
| MS.gene051700 | MS.gene72347 | 0.815955 | 7.09E-52 | -1.69E-46 |
| MS.gene051719 | MS.gene72347 | 0.816965 | 4.21E-52 | -1.69E-46 |
| MS.gene051720 | MS.gene72347 | 0.807509 | 4.88E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene72347 | 0.866236 | 3.31E-65 | -1.69E-46 |
| MS.gene051957 | MS.gene72347 | 0.812507 | 4.10E-51 | -1.69E-46 |
| MS.gene052012 | MS.gene72347 | 0.817098 | 3.93E-52 | -1.69E-46 |
| MS.gene052020 | MS.gene72347 | 0.812961 | 3.26E-51 | -1.69E-46 |
| MS.gene052208 | MS.gene72347 | 0.801574 | 8.44E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene72347 | 0.855379 | 6.56E-62 | -1.69E-46 |
| MS.gene052582 | MS.gene72347 | 0.812527 | 4.05E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene72347 | 0.8238 | 1.14E-53 | -1.69E-46 |
| MS.gene052611 | MS.gene72347 | 0.829114 | 6.17E-55 | -1.69E-46 |
| MS.gene052773 | MS.gene72347 | 0.834028 | 3.80E-56 | -1.69E-46 |
| MS.gene052863 | MS.gene72347 | 0.826962 | 2.03E-54 | -1.69E-46 |
| MS.gene052867 | MS.gene72347 | 0.813622 | 2.33E-51 | -1.69E-46 |
| MS.gene052879 | MS.gene72347 | 0.807504 | 4.89E-50 | -1.69E-46 |
| MS.gene053122 | MS.gene72347 | 0.807197 | 5.68E-50 | -1.69E-46 |
| MS.gene053145 | MS.gene72347 | 0.800734 | 1.25E-48 | -1.69E-46 |
| MS.gene053226 | MS.gene72347 | 0.877357 | 6.71E-69 | -1.69E-46 |
| MS.gene05364 | MS.gene72347 | 0.802819 | 4.68E-49 | -1.69E-46 |
| MS.gene053883 | MS.gene72347 | 0.824064 | 9.88E-54 | -1.69E-46 |
| MS.gene053900 | MS.gene72347 | 0.836999 | 6.73E-57 | -1.69E-46 |
| MS.gene053967 | MS.gene72347 | 0.833023 | 6.77E-56 | -1.69E-46 |
| MS.gene054651 | MS.gene72347 | 0.811779 | 5.90E-51 | -1.69E-46 |
| MS.gene054775 | MS.gene72347 | 0.814398 | 1.57E-51 | -1.69E-46 |
| MS.gene055465 | MS.gene72347 | 0.802368 | 5.80E-49 | -1.69E-46 |
| MS.gene055466 | MS.gene72347 | 0.846079 | 2.72E-59 | -1.69E-46 |
| MS.gene055468 | MS.gene72347 | 0.820564 | 6.42E-53 | -1.69E-46 |
| MS.gene055512 | MS.gene72347 | 0.807282 | 5.46E-50 | -1.69E-46 |
| MS.gene055580 | MS.gene72347 | -0.817641 | 2.97E-52 | -1.69E-46 |
| MS.gene055589 | MS.gene72347 | 0.820005 | 8.62E-53 | -1.69E-46 |
| MS.gene055778 | MS.gene72347 | 0.829909 | 3.95E-55 | -1.69E-46 |
| MS.gene055808 | MS.gene72347 | 0.857263 | 1.84E-62 | -1.69E-46 |
| MS.gene055818 | MS.gene72347 | 0.840949 | 6.39E-58 | -1.69E-46 |
| MS.gene056050 | MS.gene72347 | 0.816323 | 5.87E-52 | -1.69E-46 |
| MS.gene056091 | MS.gene72347 | 0.818516 | 1.88E-52 | -1.69E-46 |
| MS.gene056215 | MS.gene72347 | 0.835159 | 1.97E-56 | -1.69E-46 |
| MS.gene056366 | MS.gene72347 | 0.852028 | 6.04E-61 | -1.69E-46 |
| MS.gene056498 | MS.gene72347 | 0.811746 | 6.00E-51 | -1.69E-46 |
| MS.gene056553 | MS.gene72347 | 0.807857 | 4.12E-50 | -1.69E-46 |
| MS.gene056595 | MS.gene72347 | 0.833762 | 4.43E-56 | -1.69E-46 |
| MS.gene056631 | MS.gene72347 | 0.804805 | 1.81E-49 | -1.69E-46 |
| MS.gene056642 | MS.gene72347 | 0.805272 | 1.45E-49 | -1.69E-46 |
| MS.gene05690 | MS.gene72347 | 0.80062 | 1.32E-48 | -1.69E-46 |
| MS.gene057026 | MS.gene72347 | 0.810311 | 1.23E-50 | -1.69E-46 |
| MS.gene057060 | MS.gene72347 | 0.82563 | 4.22E-54 | -1.69E-46 |
| MS.gene057414 | MS.gene72347 | 0.806764 | 7.02E-50 | -1.69E-46 |
| MS.gene057444 | MS.gene72347 | 0.828763 | 7.50E-55 | -1.69E-46 |
| MS.gene057693 | MS.gene72347 | 0.830411 | 2.98E-55 | -1.69E-46 |
| MS.gene057915 | MS.gene72347 | 0.801874 | 7.33E-49 | -1.69E-46 |
| MS.gene058037 | MS.gene72347 | 0.841899 | 3.59E-58 | -1.69E-46 |
| MS.gene058084 | MS.gene72347 | 0.805071 | 1.59E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene72347 | 0.83503 | 2.13E-56 | -1.69E-46 |
| MS.gene058636 | MS.gene72347 | 0.800924 | 1.15E-48 | -1.69E-46 |
| MS.gene058906 | MS.gene72347 | 0.808396 | 3.16E-50 | -1.69E-46 |
| MS.gene058908 | MS.gene72347 | 0.812304 | 4.54E-51 | -1.69E-46 |
| MS.gene058911 | MS.gene72347 | 0.805631 | 1.22E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene72347 | 0.801249 | 9.84E-49 | -1.69E-46 |
| MS.gene059151 | MS.gene72347 | 0.817899 | 2.60E-52 | -1.69E-46 |
| MS.gene05950 | MS.gene72347 | 0.803097 | 4.10E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene72347 | 0.835769 | 1.38E-56 | -1.69E-46 |
| MS.gene059625 | MS.gene72347 | 0.833605 | 4.84E-56 | -1.69E-46 |
| MS.gene059842 | MS.gene72347 | 0.811084 | 8.36E-51 | -1.69E-46 |
| MS.gene059935 | MS.gene72347 | 0.812199 | 4.78E-51 | -1.69E-46 |
| MS.gene06001 | MS.gene72347 | 0.80113 | 1.04E-48 | -1.69E-46 |
| MS.gene060322 | MS.gene72347 | 0.806827 | 6.81E-50 | -1.69E-46 |
| MS.gene060429 | MS.gene72347 | 0.883583 | 3.97E-71 | -1.69E-46 |
| MS.gene060521 | MS.gene72347 | 0.813604 | 2.35E-51 | -1.69E-46 |
| MS.gene060572 | MS.gene72347 | 0.85196 | 6.31E-61 | -1.69E-46 |
| MS.gene060587 | MS.gene72347 | 0.803117 | 4.06E-49 | -1.69E-46 |
| MS.gene060781 | MS.gene72347 | 0.80669 | 7.28E-50 | -1.69E-46 |
| MS.gene06094 | MS.gene72347 | 0.815755 | 7.86E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene72347 | MS.gene070760 | PPI |
| MS.gene72347 | MS.gene045436 | PPI |
| MS.gene72347 | MS.gene070758 | PPI |
| MS.gene72347 | MS.gene006731 | PPI |
| MS.gene72347 | MS.gene070761 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72347.t1 | MTR_4g100360 | 98.298 | 235 | 4 | 0 | 1 | 235 | 1 | 235 | 9.52e-177 | 484 |
| MS.gene72347.t1 | MTR_1g078300 | 27.966 | 236 | 148 | 7 | 12 | 235 | 3 | 228 | 5.30e-19 | 84.7 |
| MS.gene72347.t1 | MTR_1g078300 | 28.111 | 217 | 136 | 6 | 31 | 235 | 1 | 209 | 2.05e-16 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72347.t1 | AT4G17510 | 73.504 | 234 | 59 | 2 | 1 | 231 | 1 | 234 | 1.71e-128 | 363 |
| MS.gene72347.t1 | AT1G65650 | 28.390 | 236 | 147 | 7 | 12 | 235 | 3 | 228 | 1.01e-18 | 84.0 |
| MS.gene72347.t1 | AT5G16310 | 27.160 | 243 | 147 | 7 | 12 | 235 | 3 | 234 | 3.58e-18 | 82.4 |
Find 50 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGAGTTGCAGTTCCTTTC+TGG | 0.062664 | 8.3:-21106912 | MS.gene72347:intron |
| TTGCAGTTCCTTTCTGGTCT+TGG | 0.252161 | 8.3:-21106906 | MS.gene72347:intron |
| TGGATTAGATGATGAGCTTT+TGG | 0.291265 | 8.3:-21106847 | MS.gene72347:CDS |
| CTTCAAATCCACTGCAAACT+TGG | 0.297842 | 8.3:-21106041 | MS.gene72347:CDS |
| AAATCCAGTGATGGATATTA+AGG | 0.333908 | 8.3:-21103378 | None:intergenic |
| CTTCCAAATCTTCCAAAAGA+TGG | 0.341663 | 8.3:-21108177 | MS.gene72347:CDS |
| ATAACTTCTGAAATCAAGTT+TGG | 0.345654 | 8.3:-21106370 | MS.gene72347:intron |
| GAGGATGGACCATGGGATAT+TGG | 0.371748 | 8.3:+21103722 | None:intergenic |
| ACATTGAAGTTCAGAGAATC+TGG | 0.378322 | 8.3:+21103417 | None:intergenic |
| TTCAAGAGGAAGCCATCTTT+TGG | 0.380122 | 8.3:+21108165 | None:intergenic |
| GGTAATGCTTGTGGCACAAT+AGG | 0.384807 | 8.3:-21106415 | MS.gene72347:CDS |
| CTCACCAAGTACTTTGTTGA+AGG | 0.411668 | 8.3:-21103702 | MS.gene72347:intron |
| GAAACCTGGTTCATGACATC+AGG | 0.416814 | 8.3:+21108136 | None:intergenic |
| ATCTGCTATGCTTGTGTGGA+TGG | 0.429690 | 8.3:-21104202 | MS.gene72347:intron |
| ATAGGGCTTCTTCATGCTCT+TGG | 0.433348 | 8.3:-21106397 | MS.gene72347:CDS |
| GGTGAACTTTATGAGCTTGA+TGG | 0.437774 | 8.3:-21103758 | MS.gene72347:CDS |
| AGCACGGCAAGAACAGGCTT+TGG | 0.440185 | 8.3:+21106816 | None:intergenic |
| GATCCTTCTGAATCATGCTC+TGG | 0.458662 | 8.3:+21103439 | None:intergenic |
| TAGGAACACGTAACCTGCAT+TGG | 0.466809 | 8.3:+21106016 | None:intergenic |
| TTTACCTTCAACAAAGTACT+TGG | 0.470505 | 8.3:+21103698 | None:intergenic |
| CATTCTGTAGCAGCCACTGC+TGG | 0.488876 | 8.3:-21105841 | MS.gene72347:CDS |
| CATTGGGTCCAAGTTTGCAG+TGG | 0.496798 | 8.3:+21106033 | None:intergenic |
| CTTCTGAATCATGCTCTGGA+TGG | 0.507581 | 8.3:+21103443 | None:intergenic |
| AACAAAGTACTTGGTGAGGA+TGG | 0.517479 | 8.3:+21103707 | None:intergenic |
| GTAATGCTTGTGGCACAATA+GGG | 0.524841 | 8.3:-21106414 | MS.gene72347:CDS |
| AGGAACACGTAACCTGCATT+GGG | 0.535845 | 8.3:+21106017 | None:intergenic |
| GCAGAGTGCCATGATGTGTA+TGG | 0.538795 | 8.3:-21106867 | MS.gene72347:CDS |
| TTTCATCTGCTATGCTTGTG+TGG | 0.539159 | 8.3:-21104206 | MS.gene72347:CDS |
| CATCTAATCCATACACATCA+TGG | 0.542114 | 8.3:+21106859 | None:intergenic |
| TCTATATCCCCTTACCGCCA+AGG | 0.546014 | 8.3:-21106790 | MS.gene72347:intron |
| TGCAAACTTGGACCCAATGC+AGG | 0.547754 | 8.3:-21106029 | MS.gene72347:intron |
| AAAATAACCTTGGCGGTAAG+GGG | 0.563148 | 8.3:+21106783 | None:intergenic |
| ACTGCCTTAATATCCATCAC+TGG | 0.567942 | 8.3:+21103374 | None:intergenic |
| CTTGAAGACCAAGACCAGAA+AGG | 0.586317 | 8.3:+21106898 | None:intergenic |
| GTTATCAGTCTGAAGAAGAG+AGG | 0.587141 | 8.3:-21106658 | MS.gene72347:intron |
| TGAGCTTGATGGAAGAAAGT+CGG | 0.593082 | 8.3:-21103747 | MS.gene72347:CDS |
| TACCTCTGTATCACCAGCAG+TGG | 0.593658 | 8.3:+21105828 | None:intergenic |
| CGAGAATGACACAGAGATGG+AGG | 0.595559 | 8.3:-21105869 | MS.gene72347:CDS |
| CATCCAGAGCATGATTCAGA+AGG | 0.605086 | 8.3:-21103442 | MS.gene72347:CDS |
| TCTCGAGAATGACACAGAGA+TGG | 0.611926 | 8.3:-21105872 | MS.gene72347:CDS |
| ACTTGGTGAGGATGGACCAT+GGG | 0.613963 | 8.3:+21103715 | None:intergenic |
| TAACCCTGATGTCATGAACC+AGG | 0.619777 | 8.3:-21108140 | MS.gene72347:intron |
| CTTCAACAAAGTACTTGGTG+AGG | 0.623693 | 8.3:+21103703 | None:intergenic |
| ACATCAGGGTTAGCTTCAAG+AGG | 0.625728 | 8.3:+21108151 | None:intergenic |
| ATATCAAAGAAATCCAGTGA+TGG | 0.629924 | 8.3:-21103387 | MS.gene72347:CDS |
| AAACCTGGTTCATGACATCA+GGG | 0.636237 | 8.3:+21108137 | None:intergenic |
| TACTTGGTGAGGATGGACCA+TGG | 0.642074 | 8.3:+21103714 | None:intergenic |
| AAGTCGGCACCAATATCCCA+TGG | 0.660482 | 8.3:-21103731 | MS.gene72347:CDS |
| AGCCACTGCTGGTGATACAG+AGG | 0.668163 | 8.3:-21105830 | MS.gene72347:intron |
| CAAACTGTGGGTAATGCTTG+TGG | 0.672525 | 8.3:-21106424 | MS.gene72347:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATAAAAAAAAACTATAAA+CGG | + | chr8.3:21104872-21104891 | None:intergenic | 10.0% |
| !! | CAAAAAAAAAAAAAACTATA+GGG | + | chr8.3:21104605-21104624 | None:intergenic | 10.0% |
| !! | TCAAAAAAAAAAAAAACTAT+AGG | + | chr8.3:21104606-21104625 | None:intergenic | 10.0% |
| !!! | TATATATTTAAATTTTCTGT+AGG | - | chr8.3:21108092-21108111 | MS.gene72347:intron | 10.0% |
| !!! | TTTATTTTTTCCAAAAAAAT+TGG | - | chr8.3:21106849-21106868 | MS.gene72347:CDS | 10.0% |
| !!! | TTTTTTTTATCTGATTTTAT+GGG | - | chr8.3:21104880-21104899 | MS.gene72347:intron | 10.0% |
| !!! | TTTTTTTTTATCTGATTTTA+TGG | - | chr8.3:21104879-21104898 | MS.gene72347:intron | 10.0% |
| !! | GTAAATATCTTAAAATGTTA+AGG | - | chr8.3:21107890-21107909 | MS.gene72347:intron | 15.0% |
| !! | TAGATATAACTAATGATAAA+AGG | - | chr8.3:21105838-21105857 | MS.gene72347:CDS | 15.0% |
| !! | TAGCATATTTCATATATAAT+TGG | - | chr8.3:21105042-21105061 | MS.gene72347:intron | 15.0% |
| !! | TATGTTAATAATTATACGTA+TGG | + | chr8.3:21103523-21103542 | None:intergenic | 15.0% |
| !! | TTTATATGAAAAAATAACCT+TGG | + | chr8.3:21104800-21104819 | None:intergenic | 15.0% |
| !!! | AATTACATATCATTTAGTTT+AGG | - | chr8.3:21105270-21105289 | MS.gene72347:intron | 15.0% |
| !!! | CAAAACATTTTATTTTGAAA+AGG | - | chr8.3:21104128-21104147 | MS.gene72347:intron | 15.0% |
| !!! | CTTTATTTTTGTTTTCATTT+TGG | + | chr8.3:21107254-21107273 | None:intergenic | 15.0% |
| !!! | GTATTAAAAAAGTATCAAAT+TGG | - | chr8.3:21103737-21103756 | MS.gene72347:CDS | 15.0% |
| !! | AAGTTCAAATTTAGTCTAAA+GGG | + | chr8.3:21106101-21106120 | None:intergenic | 20.0% |
| !! | AATAAACAAATACACAGATA+AGG | + | chr8.3:21104839-21104858 | None:intergenic | 20.0% |
| !! | ACATAAACTACATTCTATAA+AGG | + | chr8.3:21106025-21106044 | None:intergenic | 20.0% |
| !! | AGAATGTAGTTTATGTTTAT+AGG | - | chr8.3:21106029-21106048 | MS.gene72347:intron | 20.0% |
| !! | CAAAAAAAAAATGAGGTAAT+TGG | + | chr8.3:21105240-21105259 | None:intergenic | 20.0% |
| !! | GAAATATAAGAAAGAAATAG+AGG | + | chr8.3:21105589-21105608 | None:intergenic | 20.0% |
| !! | TAAGTTCAAATTTAGTCTAA+AGG | + | chr8.3:21106102-21106121 | None:intergenic | 20.0% |
| !! | TACAAAATATTGTGATATAG+CGG | - | chr8.3:21105377-21105396 | MS.gene72347:intron | 20.0% |
| !!! | ACATTTTATTTTGAAAAGGA+AGG | - | chr8.3:21104132-21104151 | MS.gene72347:intron | 20.0% |
| !!! | ATTTTTGTTTTCATTTTGGT+TGG | + | chr8.3:21107250-21107269 | None:intergenic | 20.0% |
| !!! | CAATTACCTCATTTTTTTTT+TGG | - | chr8.3:21105238-21105257 | MS.gene72347:intron | 20.0% |
| !!! | CAATTTTTAAGATTAGAACA+GGG | + | chr8.3:21103710-21103729 | None:intergenic | 20.0% |
| !!! | CTCAAATAATTACTTTGAAA+AGG | - | chr8.3:21106614-21106633 | MS.gene72347:intron | 20.0% |
| !!! | GTATTGATGTGTTTAATAAA+AGG | - | chr8.3:21107921-21107940 | MS.gene72347:intron | 20.0% |
| !!! | TGCTAACTTCTATTTTTTAA+TGG | + | chr8.3:21104567-21104586 | None:intergenic | 20.0% |
| !!! | TGGTTTCTATTTTATGTTAA+CGG | - | chr8.3:21104054-21104073 | MS.gene72347:intron | 20.0% |
| !!! | TTGACTAAATTTAACTTTTG+AGG | - | chr8.3:21105772-21105791 | MS.gene72347:intron | 20.0% |
| !!! | TTGATACTTTTTTAATACCA+GGG | + | chr8.3:21103735-21103754 | None:intergenic | 20.0% |
| !!! | TTTGATACTTTTTTAATACC+AGG | + | chr8.3:21103736-21103755 | None:intergenic | 20.0% |
| !!! | TTTTTCGAAATTCGTTATAT+GGG | + | chr8.3:21103550-21103569 | None:intergenic | 20.0% |
| !!! | TTTTTTCCAAAAAAATTGGT+TGG | - | chr8.3:21106853-21106872 | MS.gene72347:CDS | 20.0% |
| ! | AAGAGAAATTGAATACTTGT+TGG | - | chr8.3:21106932-21106951 | MS.gene72347:intron | 25.0% |
| ! | AATGAAGAAGATTGAAATGA+AGG | + | chr8.3:21103473-21103492 | None:intergenic | 25.0% |
| ! | ACAGAAAAGAAAACAACTAT+AGG | + | chr8.3:21104641-21104660 | None:intergenic | 25.0% |
| ! | AGCCTATATCAAAACAAATT+TGG | - | chr8.3:21107528-21107547 | MS.gene72347:intron | 25.0% |
| ! | ATAACTTTCCTACAGAATTA+TGG | + | chr8.3:21108052-21108071 | None:intergenic | 25.0% |
| ! | ATACATGAAAATCCTATTCA+AGG | + | chr8.3:21105083-21105102 | None:intergenic | 25.0% |
| ! | ATAGAGCTAAACAATATATC+AGG | - | chr8.3:21107443-21107462 | MS.gene72347:intron | 25.0% |
| ! | ATATAAGAAAGAAATAGAGG+AGG | + | chr8.3:21105586-21105605 | None:intergenic | 25.0% |
| ! | ATATGAAAAAATAACCTTGG+CGG | + | chr8.3:21104797-21104816 | None:intergenic | 25.0% |
| ! | ATTGAAATGAAGGATGAAAA+GGG | + | chr8.3:21103463-21103482 | None:intergenic | 25.0% |
| ! | ATTGATGTTTATGTTTGTTC+AGG | - | chr8.3:21104456-21104475 | MS.gene72347:intron | 25.0% |
| ! | ATTTCTCTTTGATAAAGTTG+AGG | + | chr8.3:21106921-21106940 | None:intergenic | 25.0% |
| ! | CAAAGTAATTATTTGAGTCT+CGG | + | chr8.3:21106611-21106630 | None:intergenic | 25.0% |
| ! | CAGAAAAGAAAACAACTATA+GGG | + | chr8.3:21104640-21104659 | None:intergenic | 25.0% |
| ! | CAGAGAATAAAATGTTATTG+AGG | + | chr8.3:21107411-21107430 | None:intergenic | 25.0% |
| ! | CCTGTTCTAATCTTAAAAAT+TGG | - | chr8.3:21103708-21103727 | MS.gene72347:CDS | 25.0% |
| ! | GAAATTAATCAGACAAACAT+AGG | + | chr8.3:21107769-21107788 | None:intergenic | 25.0% |
| ! | GATATACAGAAAACATAATC+AGG | - | chr8.3:21103883-21103902 | MS.gene72347:intron | 25.0% |
| ! | GTTACATACAACAAAATTTG+AGG | + | chr8.3:21106126-21106145 | None:intergenic | 25.0% |
| ! | TACATGAAAATCCTATTCAA+GGG | + | chr8.3:21105082-21105101 | None:intergenic | 25.0% |
| ! | TGGACAGAAAAAAAATATTG+TGG | - | chr8.3:21104320-21104339 | MS.gene72347:intron | 25.0% |
| ! | TTAATCACAGGAAAAATTAG+AGG | + | chr8.3:21106560-21106579 | None:intergenic | 25.0% |
| !! | AAACCGTCTTAAAACATTTT+GGG | - | chr8.3:21103682-21103701 | MS.gene72347:intron | 25.0% |
| !! | AGGATTTTCATGTATTTTTC+TGG | - | chr8.3:21105088-21105107 | MS.gene72347:intron | 25.0% |
| !! | ATATTTTATGAAGCAAACTG+TGG | - | chr8.3:21105133-21105152 | MS.gene72347:intron | 25.0% |
| !! | CAATAACATTTTATTCTCTG+TGG | - | chr8.3:21107411-21107430 | MS.gene72347:intron | 25.0% |
| !! | GAATTTTGTCTATGAAATCT+GGG | - | chr8.3:21105019-21105038 | MS.gene72347:intron | 25.0% |
| !! | GGTTTCTATTTTATGTTAAC+GGG | - | chr8.3:21104055-21104074 | MS.gene72347:intron | 25.0% |
| !! | GTTTCTATTTTATGTTAACG+GGG | - | chr8.3:21104056-21104075 | MS.gene72347:intron | 25.0% |
| !! | TATTTTATGAAGCAAACTGT+GGG | - | chr8.3:21105134-21105153 | MS.gene72347:intron | 25.0% |
| !! | TCTGAAAAGTTACATTTTCA+GGG | - | chr8.3:21106166-21106185 | MS.gene72347:intron | 25.0% |
| !! | TGAATTTTGTCTATGAAATC+TGG | - | chr8.3:21105018-21105037 | MS.gene72347:intron | 25.0% |
| !! | TTTTGTAATTGCAACTTTCT+GGG | - | chr8.3:21107093-21107112 | MS.gene72347:intron | 25.0% |
| !! | TTTTTGTAATTGCAACTTTC+TGG | - | chr8.3:21107092-21107111 | MS.gene72347:intron | 25.0% |
| !!! | AGCAAGATTTTTTTATGCAT+AGG | + | chr8.3:21105897-21105916 | None:intergenic | 25.0% |
| !!! | AGCCAAATTTGTTTTGATAT+AGG | + | chr8.3:21107533-21107552 | None:intergenic | 25.0% |
| !!! | ATAACTTCTGAAATCAAGTT+TGG | - | chr8.3:21105200-21105219 | MS.gene72347:intron | 25.0% |
| !!! | CCAATTTTTAAGATTAGAAC+AGG | + | chr8.3:21103711-21103730 | None:intergenic | 25.0% |
| !!! | CTTTTTCGAAATTCGTTATA+TGG | + | chr8.3:21103551-21103570 | None:intergenic | 25.0% |
| !!! | TGATAAAAGGTTCTTTTTTG+TGG | - | chr8.3:21105851-21105870 | MS.gene72347:CDS | 25.0% |
| !!! | TTTGTTTTTTTATCCTGAAG+AGG | - | chr8.3:21107132-21107151 | MS.gene72347:intron | 25.0% |
| AAAAAAAACCCCTAATCTTG+AGG | - | chr8.3:21103920-21103939 | MS.gene72347:intron | 30.0% | |
| AAACAAATACACAGATAAGG+AGG | + | chr8.3:21104836-21104855 | None:intergenic | 30.0% | |
| AAACATTGTCAATACACGAA+AGG | + | chr8.3:21107298-21107317 | None:intergenic | 30.0% | |
| AAATCACAAGACTAAGACTA+TGG | + | chr8.3:21106721-21106740 | None:intergenic | 30.0% | |
| AACAAATACACAGATAAGGA+GGG | + | chr8.3:21104835-21104854 | None:intergenic | 30.0% | |
| AATTTCTTAAGTCATGGTTG+CGG | + | chr8.3:21106324-21106343 | None:intergenic | 30.0% | |
| AGACCATGTGTTAATATAGT+TGG | - | chr8.3:21106976-21106995 | MS.gene72347:intron | 30.0% | |
| AGTGTTTAAGCATTAATCAC+AGG | + | chr8.3:21106572-21106591 | None:intergenic | 30.0% | |
| ATATCAAAGAAATCCAGTGA+TGG | - | chr8.3:21108183-21108202 | MS.gene72347:CDS | 30.0% | |
| CCAAAAAATTGATCTGTAAC+TGG | - | chr8.3:21104300-21104319 | MS.gene72347:intron | 30.0% | |
| GAAAATAGCAAAACACAATC+TGG | - | chr8.3:21106465-21106484 | MS.gene72347:intron | 30.0% | |
| GATGCACCAAAAAAAAAATG+AGG | + | chr8.3:21105247-21105266 | None:intergenic | 30.0% | |
| GATTGAAATGAAGGATGAAA+AGG | + | chr8.3:21103464-21103483 | None:intergenic | 30.0% | |
| GCAACAGAATGATGAAAAAA+GGG | - | chr8.3:21104937-21104956 | MS.gene72347:intron | 30.0% | |
| GTCAAAATTAGTCCTTTGAA+TGG | + | chr8.3:21104240-21104259 | None:intergenic | 30.0% | |
| TAATCTTAAAAATTGGTCCC+TGG | - | chr8.3:21103715-21103734 | MS.gene72347:CDS | 30.0% | |
| TCACCAACTATATTAACACA+TGG | + | chr8.3:21106982-21107001 | None:intergenic | 30.0% | |
| TCTGCATTAGATGAAGAAAT+GGG | + | chr8.3:21106447-21106466 | None:intergenic | 30.0% | |
| TGATGACTGATGAGTAATTA+TGG | - | chr8.3:21106060-21106079 | MS.gene72347:CDS | 30.0% | |
| TGCAACAGAATGATGAAAAA+AGG | - | chr8.3:21104936-21104955 | MS.gene72347:intron | 30.0% | |
| TGGGTGGAAGATAATATTTA+CGG | - | chr8.3:21104157-21104176 | MS.gene72347:intron | 30.0% | |
| TTAAGATGAAACCCTTGAAT+AGG | - | chr8.3:21105068-21105087 | MS.gene72347:intron | 30.0% | |
| TTCTGCATTAGATGAAGAAA+TGG | + | chr8.3:21106448-21106467 | None:intergenic | 30.0% | |
| TTTCCAAAAAAATTGGTTGG+TGG | - | chr8.3:21106856-21106875 | MS.gene72347:CDS | 30.0% | |
| TTTGGGAATTTCTTAAGTCA+TGG | + | chr8.3:21106330-21106349 | None:intergenic | 30.0% | |
| ! | AAAATTAGAGGAAAGGCATA+AGG | + | chr8.3:21106548-21106567 | None:intergenic | 30.0% |
| ! | CAAACCGTCTTAAAACATTT+TGG | - | chr8.3:21103681-21103700 | MS.gene72347:intron | 30.0% |
| ! | CAATATTTTCCCTGTAAATG+TGG | + | chr8.3:21104084-21104103 | None:intergenic | 30.0% |
| ! | GTTTGAAATATTTGTGATGC+AGG | - | chr8.3:21107319-21107338 | MS.gene72347:intron | 30.0% |
| ! | TTTACCTTCAACAAAGTACT+TGG | + | chr8.3:21107875-21107894 | None:intergenic | 30.0% |
| !! | ACTTGTTGGTTAGTGAATTT+TGG | - | chr8.3:21106946-21106965 | MS.gene72347:intron | 30.0% |
| !! | CTCTGAAAAGTTACATTTTC+AGG | - | chr8.3:21106165-21106184 | MS.gene72347:intron | 30.0% |
| !! | CTTGTTGGTTAGTGAATTTT+GGG | - | chr8.3:21106947-21106966 | MS.gene72347:intron | 30.0% |
| !! | GAAGAGCTCATAATTAGTTT+TGG | + | chr8.3:21107567-21107586 | None:intergenic | 30.0% |
| !! | GAGTGTTTCTTTTAAGTGTA+TGG | - | chr8.3:21104490-21104509 | MS.gene72347:intron | 30.0% |
| !! | GTAAGAAACCTCTAAAACAT+AGG | - | chr8.3:21107491-21107510 | MS.gene72347:intron | 30.0% |
| !! | TATTTTGAAAAGGAAGGTGT+GGG | - | chr8.3:21104138-21104157 | MS.gene72347:intron | 30.0% |
| !! | TTCATGTATTTTTCTGGTGT+AGG | - | chr8.3:21105094-21105113 | MS.gene72347:intron | 30.0% |
| !!! | AATTAGTTTTGGACATGTAC+AGG | + | chr8.3:21107556-21107575 | None:intergenic | 30.0% |
| !!! | ATTCCACCAACCAATTTTTT+TGG | + | chr8.3:21106862-21106881 | None:intergenic | 30.0% |
| !!! | CAAAATGTTTTAAGACGGTT+TGG | + | chr8.3:21103683-21103702 | None:intergenic | 30.0% |
| !!! | CCAGTTACAGATCAATTTTT+TGG | + | chr8.3:21104303-21104322 | None:intergenic | 30.0% |
| !!! | GTTCCCAAAATGTTTTAAGA+CGG | + | chr8.3:21103688-21103707 | None:intergenic | 30.0% |
| !!! | TAAAAGGTTCTTTTTTGTGG+TGG | - | chr8.3:21105854-21105873 | MS.gene72347:CDS | 30.0% |
| !!! | TTATTTTGAAAAGGAAGGTG+TGG | - | chr8.3:21104137-21104156 | MS.gene72347:intron | 30.0% |
| AAAAAATAACCTTGGCGGTA+AGG | + | chr8.3:21104792-21104811 | None:intergenic | 35.0% | |
| AAAAATAACCTTGGCGGTAA+GGG | + | chr8.3:21104791-21104810 | None:intergenic | 35.0% | |
| AAGGGGATATAGAAAAAGCA+CGG | + | chr8.3:21104773-21104792 | None:intergenic | 35.0% | |
| AATTAAGAGTAGCAGAGATG+AGG | + | chr8.3:21106831-21106850 | None:intergenic | 35.0% | |
| AATTGCAGATCGCGAAAAAA+TGG | + | chr8.3:21105451-21105470 | None:intergenic | 35.0% | |
| ACATTGAAGTTCAGAGAATC+TGG | + | chr8.3:21108156-21108175 | None:intergenic | 35.0% | |
| AGAAAGAAATAGAGGAGGTT+TGG | + | chr8.3:21105581-21105600 | None:intergenic | 35.0% | |
| AGAACCTAACAACCAACTTA+AGG | + | chr8.3:21104388-21104407 | None:intergenic | 35.0% | |
| AGAGTGACTAAGATCCAAAT+TGG | + | chr8.3:21104430-21104449 | None:intergenic | 35.0% | |
| AGCATTTAACAACACTGCAT+AGG | + | chr8.3:21107608-21107627 | None:intergenic | 35.0% | |
| ATTGCACACTATGTGTTTGT+TGG | - | chr8.3:21104100-21104119 | MS.gene72347:intron | 35.0% | |
| CACAGGAAAAATTAGAGGAA+AGG | + | chr8.3:21106555-21106574 | None:intergenic | 35.0% | |
| CATCTAATCCATACACATCA+TGG | + | chr8.3:21104714-21104733 | None:intergenic | 35.0% | |
| CTTCCAAATCTTCCAAAAGA+TGG | - | chr8.3:21103393-21103412 | MS.gene72347:CDS | 35.0% | |
| GAAAGAAATAGAGGAGGTTT+GGG | + | chr8.3:21105580-21105599 | None:intergenic | 35.0% | |
| GAACCTAACAACCAACTTAA+GGG | + | chr8.3:21104387-21104406 | None:intergenic | 35.0% | |
| GAGATAACAGAGAGAAGATT+GGG | + | chr8.3:21106214-21106233 | None:intergenic | 35.0% | |
| GATGCAATGTTATTGTATGC+AGG | - | chr8.3:21107791-21107810 | MS.gene72347:intron | 35.0% | |
| GGGTGGAAGATAATATTTAC+GGG | - | chr8.3:21104158-21104177 | MS.gene72347:intron | 35.0% | |
| GGTGGAAGATAATATTTACG+GGG | - | chr8.3:21104159-21104178 | MS.gene72347:intron | 35.0% | |
| GTCAATGACCATAATTCTGT+AGG | - | chr8.3:21108041-21108060 | MS.gene72347:intron | 35.0% | |
| GTGGAAGATAATATTTACGG+GGG | - | chr8.3:21104160-21104179 | MS.gene72347:intron | 35.0% | |
| TAAGTAGGTAACCAAAAGTG+TGG | + | chr8.3:21107029-21107048 | None:intergenic | 35.0% | |
| TACTCATCAGTCATCATACA+AGG | + | chr8.3:21106056-21106075 | None:intergenic | 35.0% | |
| TCTGAACTCACTATGAGTAT+TGG | - | chr8.3:21106505-21106524 | MS.gene72347:intron | 35.0% | |
| TTCATCTGTCTTCCATTCAA+AGG | - | chr8.3:21104225-21104244 | MS.gene72347:CDS | 35.0% | |
| TTGGTTTAGTCATGCCAATT+TGG | - | chr8.3:21104413-21104432 | MS.gene72347:intron | 35.0% | |
| ! | AGGTCAGTGTTGTTAAATAG+CGG | - | chr8.3:21105290-21105309 | MS.gene72347:intron | 35.0% |
| ! | GATAAAGCTTGGTTGTTGTT+GGG | + | chr8.3:21106662-21106681 | None:intergenic | 35.0% |
| ! | GATGAGTAATTATGGTGTTG+TGG | - | chr8.3:21106068-21106087 | MS.gene72347:CDS | 35.0% |
| ! | TATGCAGTGTTGTTAAATGC+TGG | - | chr8.3:21107607-21107626 | MS.gene72347:intron | 35.0% |
| !! | AAGCCATCTTTTGGAAGATT+TGG | + | chr8.3:21103399-21103418 | None:intergenic | 35.0% |
| !! | AGATGATGAGCTTTTGGAAA+TGG | - | chr8.3:21104729-21104748 | MS.gene72347:intron | 35.0% |
| !! | ATACCCTTAAGTTGGTTGTT+AGG | - | chr8.3:21104381-21104400 | MS.gene72347:intron | 35.0% |
| !! | CTTTTGGAAGATTTGGAAGA+AGG | + | chr8.3:21103392-21103411 | None:intergenic | 35.0% |
| !! | GGTTGTTAGGTTCTAGATAT+TGG | - | chr8.3:21104394-21104413 | MS.gene72347:intron | 35.0% |
| !! | TGGATTAGATGATGAGCTTT+TGG | - | chr8.3:21104723-21104742 | MS.gene72347:intron | 35.0% |
| !! | TTGGTTAGTGAATTTTGGGT+GGG | - | chr8.3:21106951-21106970 | MS.gene72347:intron | 35.0% |
| !!! | AATGTTTTAAGACGGTTTGG+TGG | + | chr8.3:21103680-21103699 | None:intergenic | 35.0% |
| !!! | ATCAATTTTTTGGCTACTGC+AGG | + | chr8.3:21104293-21104312 | None:intergenic | 35.0% |
| !!! | GTTGCTTTTGTTATCAGTTG+AGG | - | chr8.3:21105487-21105506 | MS.gene72347:intron | 35.0% |
| AAAATAACCTTGGCGGTAAG+GGG | + | chr8.3:21104790-21104809 | None:intergenic | 40.0% | |
| AAACCTGGTTCATGACATCA+GGG | + | chr8.3:21103436-21103455 | None:intergenic | 40.0% | |
| AAAGTGTGGTAGTCTCTTAG+TGG | + | chr8.3:21107015-21107034 | None:intergenic | 40.0% | |
| AATGGAAGACAGATGAAAGC+TGG | + | chr8.3:21104222-21104241 | None:intergenic | 40.0% | |
| ACCACTTGACAACAACATCA+TGG | + | chr8.3:21107992-21108011 | None:intergenic | 40.0% | |
| ACCATGATGTTGTTGTCAAG+TGG | - | chr8.3:21107988-21108007 | MS.gene72347:intron | 40.0% | |
| ACTGTGCTAAACTAGACTAG+AGG | + | chr8.3:21106358-21106377 | None:intergenic | 40.0% | |
| ATGAAGAAATGGGAGGACTT+AGG | + | chr8.3:21106437-21106456 | None:intergenic | 40.0% | |
| ATGTAGCTAACCTCACTTAG+TGG | + | chr8.3:21106685-21106704 | None:intergenic | 40.0% | |
| CGAGATAACAGAGAGAAGAT+TGG | + | chr8.3:21106215-21106234 | None:intergenic | 40.0% | |
| CTCACCAAGTACTTTGTTGA+AGG | - | chr8.3:21107868-21107887 | MS.gene72347:intron | 40.0% | |
| CTGTGCTAAACTAGACTAGA+GGG | + | chr8.3:21106357-21106376 | None:intergenic | 40.0% | |
| CTTCAAATCCACTGCAAACT+TGG | - | chr8.3:21105529-21105548 | MS.gene72347:intron | 40.0% | |
| GATGAAAAGGGATAGAAACC+TGG | + | chr8.3:21103451-21103470 | None:intergenic | 40.0% | |
| GCACAGCTATAACTGCTATT+TGG | + | chr8.3:21107678-21107697 | None:intergenic | 40.0% | |
| GCATTAGATGAAGAAATGGG+AGG | + | chr8.3:21106444-21106463 | None:intergenic | 40.0% | |
| GCTATAGCGTTATTGCATAG+CGG | - | chr8.3:21105314-21105333 | MS.gene72347:intron | 40.0% | |
| GGATAAAGCTTGGTTGTTGT+TGG | + | chr8.3:21106663-21106682 | None:intergenic | 40.0% | |
| GGTGAACTTTATGAGCTTGA+TGG | - | chr8.3:21107812-21107831 | MS.gene72347:intron | 40.0% | |
| GTAATGCTTGTGGCACAATA+GGG | - | chr8.3:21105156-21105175 | MS.gene72347:intron | 40.0% | |
| GTTATCAGTCTGAAGAAGAG+AGG | - | chr8.3:21104912-21104931 | MS.gene72347:intron | 40.0% | |
| TAGCAGTTATAGCTGTGCAA+TGG | - | chr8.3:21107680-21107699 | MS.gene72347:intron | 40.0% | |
| TCAAATTGGTCCCCCTAATA+CGG | - | chr8.3:21103751-21103770 | MS.gene72347:CDS | 40.0% | |
| TCACTTAGTGGGATAAAGCT+TGG | + | chr8.3:21106673-21106692 | None:intergenic | 40.0% | |
| TGAGCTTGATGGAAGAAAGT+CGG | - | chr8.3:21107823-21107842 | MS.gene72347:intron | 40.0% | |
| TGCTAGATTGGGAGATCATT+GGG | + | chr8.3:21106396-21106415 | None:intergenic | 40.0% | |
| TGTAGCTAACCTCACTTAGT+GGG | + | chr8.3:21106684-21106703 | None:intergenic | 40.0% | |
| TGTGGTAAGACTAACGAGAT+TGG | + | chr8.3:21106793-21106812 | None:intergenic | 40.0% | |
| ! | AACAAAGTACTTGGTGAGGA+TGG | + | chr8.3:21107866-21107885 | None:intergenic | 40.0% |
| ! | AAGCTTTATCCCACTAAGTG+AGG | - | chr8.3:21106672-21106691 | MS.gene72347:intron | 40.0% |
| ! | CTAAGAGACTACCACACTTT+TGG | - | chr8.3:21107015-21107034 | MS.gene72347:intron | 40.0% |
| ! | CTTCAACAAAGTACTTGGTG+AGG | + | chr8.3:21107870-21107889 | None:intergenic | 40.0% |
| ! | GTTGGTTAGTGAATTTTGGG+TGG | - | chr8.3:21106950-21106969 | MS.gene72347:intron | 40.0% |
| ! | TCGATTTTGCCACCGTATTA+GGG | + | chr8.3:21103766-21103785 | None:intergenic | 40.0% |
| ! | TGTTGTCAAGTGGTGCTTTT+GGG | - | chr8.3:21107998-21108017 | MS.gene72347:intron | 40.0% |
| ! | TTCAAGAGGAAGCCATCTTT+TGG | + | chr8.3:21103408-21103427 | None:intergenic | 40.0% |
| ! | TTGTTGTCAAGTGGTGCTTT+TGG | - | chr8.3:21107997-21108016 | MS.gene72347:intron | 40.0% |
| !! | AGCTAGCTCCTATGTTTTAG+AGG | + | chr8.3:21107502-21107521 | None:intergenic | 40.0% |
| !! | ATCGATTTTGCCACCGTATT+AGG | + | chr8.3:21103767-21103786 | None:intergenic | 40.0% |
| AAAGAGGGTCGGTATAGAGA+AGG | + | chr8.3:21103635-21103654 | None:intergenic | 45.0% | |
| AACGGGGTTCCACATTTACA+GGG | - | chr8.3:21104072-21104091 | MS.gene72347:intron | 45.0% | |
| AAGACAGATGAAAGCTGGAG+GGG | + | chr8.3:21104217-21104236 | None:intergenic | 45.0% | |
| AATGTGGTAGCAGTACCAAG+TGG | + | chr8.3:21104188-21104207 | None:intergenic | 45.0% | |
| AGGAACACGTAACCTGCATT+GGG | + | chr8.3:21105556-21105575 | None:intergenic | 45.0% | |
| AGGATGTTGTGTTGGATGTG+TGG | + | chr8.3:21106811-21106830 | None:intergenic | 45.0% | |
| AGGCGCACTTTGACTATCAA+AGG | + | chr8.3:21104273-21104292 | None:intergenic | 45.0% | |
| ATAGGGCTTCTTCATGCTCT+TGG | - | chr8.3:21105173-21105192 | MS.gene72347:intron | 45.0% | |
| ATATTTACGGGGGTTCCACT+TGG | - | chr8.3:21104170-21104189 | MS.gene72347:intron | 45.0% | |
| CAAACTGTGGGTAATGCTTG+TGG | - | chr8.3:21105146-21105165 | MS.gene72347:intron | 45.0% | |
| CAGAGATGAGGATGTTGTGT+TGG | + | chr8.3:21106819-21106838 | None:intergenic | 45.0% | |
| CATCCAGAGCATGATTCAGA+AGG | - | chr8.3:21108128-21108147 | MS.gene72347:intron | 45.0% | |
| CGATCTGCAATTGACAACAC+TGG | - | chr8.3:21105459-21105478 | MS.gene72347:intron | 45.0% | |
| CTAATCCGTTCCTCCTATCT+CGG | + | chr8.3:21107059-21107078 | None:intergenic | 45.0% | |
| CTTAGGAAAGGAGGACTGAT+CGG | + | chr8.3:21106420-21106439 | None:intergenic | 45.0% | |
| CTTGAAGACCAAGACCAGAA+AGG | + | chr8.3:21104675-21104694 | None:intergenic | 45.0% | |
| GAAACCTGGTTCATGACATC+AGG | + | chr8.3:21103437-21103456 | None:intergenic | 45.0% | |
| GAAATAGAGGAGGTTTGGGT+AGG | + | chr8.3:21105576-21105595 | None:intergenic | 45.0% | |
| GAAATGGGAGGACTTAGGAA+AGG | + | chr8.3:21106432-21106451 | None:intergenic | 45.0% | |
| GAAGACAGATGAAAGCTGGA+GGG | + | chr8.3:21104218-21104237 | None:intergenic | 45.0% | |
| GAAGATTGGGTCTAATGACG+TGG | + | chr8.3:21106201-21106220 | None:intergenic | 45.0% | |
| GATCCTTCTGAATCATGCTC+TGG | + | chr8.3:21108134-21108153 | None:intergenic | 45.0% | |
| GGTAATGCTTGTGGCACAAT+AGG | - | chr8.3:21105155-21105174 | MS.gene72347:intron | 45.0% | |
| GGTGGAAGATACCCTTAAGT+TGG | - | chr8.3:21104373-21104392 | MS.gene72347:intron | 45.0% | |
| GTCTCGGTCACATTATGCAA+AGG | + | chr8.3:21106595-21106614 | None:intergenic | 45.0% | |
| GTGCTAGATTGGGAGATCAT+TGG | + | chr8.3:21106397-21106416 | None:intergenic | 45.0% | |
| TAACCCTGATGTCATGAACC+AGG | - | chr8.3:21103430-21103449 | MS.gene72347:CDS | 45.0% | |
| TAACGGGGTTCCACATTTAC+AGG | - | chr8.3:21104071-21104090 | MS.gene72347:intron | 45.0% | |
| TAATCCGTTCCTCCTATCTC+GGG | + | chr8.3:21107058-21107077 | None:intergenic | 45.0% | |
| TACTTACCTTGACCCGAGAT+AGG | - | chr8.3:21107043-21107062 | MS.gene72347:intron | 45.0% | |
| TAGGAACACGTAACCTGCAT+TGG | + | chr8.3:21105557-21105576 | None:intergenic | 45.0% | |
| TATCTCGGGTCAAGGTAAGT+AGG | + | chr8.3:21107044-21107063 | None:intergenic | 45.0% | |
| TCATTGGGAGTCATGAGGTA+TGG | + | chr8.3:21106381-21106400 | None:intergenic | 45.0% | |
| TCATTGTAGTCATTCGCCGT+GGG | - | chr8.3:21104352-21104371 | MS.gene72347:intron | 45.0% | |
| TCTCGAGAATGACACAGAGA+TGG | - | chr8.3:21105698-21105717 | MS.gene72347:intron | 45.0% | |
| TGCAGATCGCGAAAAAATGG+CGG | + | chr8.3:21105448-21105467 | None:intergenic | 45.0% | |
| TGCTAAACTAGACTAGAGGG+TGG | + | chr8.3:21106354-21106373 | None:intergenic | 45.0% | |
| TGTACTATACTGCGTATCGC+AGG | + | chr8.3:21105361-21105380 | None:intergenic | 45.0% | |
| TGTGAGTTGCAGTTCCTTTC+TGG | - | chr8.3:21104658-21104677 | MS.gene72347:intron | 45.0% | |
| TTAGGAAAGGAGGACTGATC+GGG | + | chr8.3:21106419-21106438 | None:intergenic | 45.0% | |
| TTGCAAGAAGACCAAGACCA+AGG | + | chr8.3:21106266-21106285 | None:intergenic | 45.0% | |
| ! | AGAAAAAGCACGGCAAGAAC+AGG | + | chr8.3:21104763-21104782 | None:intergenic | 45.0% |
| ! | CGATTTTGCCACCGTATTAG+GGG | + | chr8.3:21103765-21103784 | None:intergenic | 45.0% |
| ! | CTGCAAAGTTTTGCCTCTTC+AGG | + | chr8.3:21107148-21107167 | None:intergenic | 45.0% |
| ! | CTTCTGAATCATGCTCTGGA+TGG | + | chr8.3:21108130-21108149 | None:intergenic | 45.0% |
| ! | GAGGAAAGGCATAAGGCTAA+AGG | + | chr8.3:21106541-21106560 | None:intergenic | 45.0% |
| ! | GATTTTGCCACCGTATTAGG+GGG | + | chr8.3:21103764-21103783 | None:intergenic | 45.0% |
| ! | TTGCAGTTCCTTTCTGGTCT+TGG | - | chr8.3:21104664-21104683 | MS.gene72347:intron | 45.0% |
| ! | TTTGAAAAGGAAGGTGTGGG+TGG | - | chr8.3:21104141-21104160 | MS.gene72347:intron | 45.0% |
| !! | ACATCAGGGTTAGCTTCAAG+AGG | + | chr8.3:21103422-21103441 | None:intergenic | 45.0% |
| !! | TTAAGGGTATCTTCCACCCA+CGG | + | chr8.3:21104371-21104390 | None:intergenic | 45.0% |
| !!! | GTTTTAAGACGGTTTGGTGG+CGG | + | chr8.3:21103677-21103696 | None:intergenic | 45.0% |
| AAGTCGGCACCAATATCCCA+TGG | - | chr8.3:21107839-21107858 | MS.gene72347:intron | 50.0% | |
| AATCTTGAGGCCCTGTGCTA+AGG | - | chr8.3:21103933-21103952 | MS.gene72347:intron | 50.0% | |
| AATTGGTCCCCCTAATACGG+TGG | - | chr8.3:21103754-21103773 | MS.gene72347:CDS | 50.0% | |
| ACAAACCCCCCACCTCAAAA+AGG | + | chr8.3:21104030-21104049 | None:intergenic | 50.0% | |
| ACTAGACTAGAGGGTGGCTT+TGG | + | chr8.3:21106348-21106367 | None:intergenic | 50.0% | |
| ACTGCATAGGCAACTGCAGA+AGG | + | chr8.3:21107595-21107614 | None:intergenic | 50.0% | |
| AGCACAGGGCCTCAAGATTA+GGG | + | chr8.3:21103932-21103951 | None:intergenic | 50.0% | |
| ATCCTCTGCAAGTGGCATCA+AGG | + | chr8.3:21103960-21103979 | None:intergenic | 50.0% | |
| ATCTTGAGGCCCTGTGCTAA+GGG | - | chr8.3:21103934-21103953 | MS.gene72347:intron | 50.0% | |
| ATGGGAGGACTTAGGAAAGG+AGG | + | chr8.3:21106429-21106448 | None:intergenic | 50.0% | |
| CAAACCCCCCACCTCAAAAA+GGG | + | chr8.3:21104029-21104048 | None:intergenic | 50.0% | |
| CAAGAAGACCAAGACCAAGG+TGG | + | chr8.3:21106263-21106282 | None:intergenic | 50.0% | |
| CACGGCGAATGACTACAATG+AGG | + | chr8.3:21104353-21104372 | None:intergenic | 50.0% | |
| CATTGGGTCCAAGTTTGCAG+TGG | + | chr8.3:21105540-21105559 | None:intergenic | 50.0% | |
| CCACATCTCTTCCACTAGTC+TGG | - | chr8.3:21103990-21104009 | MS.gene72347:intron | 50.0% | |
| CCAGACTAGTGGAAGAGATG+TGG | + | chr8.3:21103993-21104012 | None:intergenic | 50.0% | |
| CGAGAATGACACAGAGATGG+AGG | - | chr8.3:21105701-21105720 | MS.gene72347:intron | 50.0% | |
| CTAGACTAGAGGGTGGCTTT+GGG | + | chr8.3:21106347-21106366 | None:intergenic | 50.0% | |
| CTCATTGTAGTCATTCGCCG+TGG | - | chr8.3:21104351-21104370 | MS.gene72347:intron | 50.0% | |
| CTGCATAGGCAACTGCAGAA+GGG | + | chr8.3:21107594-21107613 | None:intergenic | 50.0% | |
| GACTGATCGGGTGCTAGATT+GGG | + | chr8.3:21106407-21106426 | None:intergenic | 50.0% | |
| GAGGATGGACCATGGGATAT+TGG | + | chr8.3:21107851-21107870 | None:intergenic | 50.0% | |
| GGAAGACAGATGAAAGCTGG+AGG | + | chr8.3:21104219-21104238 | None:intergenic | 50.0% | |
| GGAGATCATTGGGAGTCATG+AGG | + | chr8.3:21106386-21106405 | None:intergenic | 50.0% | |
| TACCTCTGTATCACCAGCAG+TGG | + | chr8.3:21105745-21105764 | None:intergenic | 50.0% | |
| TAGCACAGGGCCTCAAGATT+AGG | + | chr8.3:21103933-21103952 | None:intergenic | 50.0% | |
| TCTATATCCCCTTACCGCCA+AGG | - | chr8.3:21104780-21104799 | MS.gene72347:intron | 50.0% | |
| TGCAAACTTGGACCCAATGC+AGG | - | chr8.3:21105541-21105560 | MS.gene72347:intron | 50.0% | |
| TTACCTTGACCCGAGATAGG+AGG | - | chr8.3:21107046-21107065 | MS.gene72347:intron | 50.0% | |
| TTGACCCGAGATAGGAGGAA+CGG | - | chr8.3:21107051-21107070 | MS.gene72347:intron | 50.0% | |
| ! | ACTTGGTGAGGATGGACCAT+GGG | + | chr8.3:21107858-21107877 | None:intergenic | 50.0% |
| ! | GCAGAGTGCCATGATGTGTA+TGG | - | chr8.3:21104703-21104722 | MS.gene72347:intron | 50.0% |
| ! | TACTTGGTGAGGATGGACCA+TGG | + | chr8.3:21107859-21107878 | None:intergenic | 50.0% |
| ! | TGATGCCACTTGCAGAGGAT+TGG | - | chr8.3:21103960-21103979 | MS.gene72347:intron | 50.0% |
| ACCGACCCTCTTTCTCCCTT+CGG | - | chr8.3:21103642-21103661 | MS.gene72347:intron | 55.0% | |
| AGCACGGCAAGAACAGGCTT+TGG | + | chr8.3:21104757-21104776 | None:intergenic | 55.0% | |
| AGCCACTGCTGGTGATACAG+AGG | - | chr8.3:21105740-21105759 | MS.gene72347:intron | 55.0% | |
| AGTGGAAGAGATGTGGCGCA+AGG | + | chr8.3:21103986-21104005 | None:intergenic | 55.0% | |
| CAAGGCCAATCCTCTGCAAG+TGG | + | chr8.3:21103968-21103987 | None:intergenic | 55.0% | |
| CATAGGCAACTGCAGAAGGG+AGG | + | chr8.3:21107591-21107610 | None:intergenic | 55.0% | |
| CATTCTGTAGCAGCCACTGC+TGG | - | chr8.3:21105729-21105748 | MS.gene72347:intron | 55.0% | |
| CCCACCTCAAAAAGGGAGGA+GGG | + | chr8.3:21104022-21104041 | None:intergenic | 55.0% | |
| CCTCAAAAAGGGAGGAGGGA+AGG | + | chr8.3:21104018-21104037 | None:intergenic | 55.0% | |
| GCACAGGGCCTCAAGATTAG+GGG | + | chr8.3:21103931-21103950 | None:intergenic | 55.0% | |
| GCATCAAGGCCCTTAGCACA+GGG | + | chr8.3:21103946-21103965 | None:intergenic | 55.0% | |
| GCTGGAGGGGATGCATAATG+TGG | + | chr8.3:21104204-21104223 | None:intergenic | 55.0% | |
| GGACTGATCGGGTGCTAGAT+TGG | + | chr8.3:21106408-21106427 | None:intergenic | 55.0% | |
| GTTCCTCCTATCTCGGGTCA+AGG | + | chr8.3:21107052-21107071 | None:intergenic | 55.0% | |
| TCTAGTCGCCACCTTGGTCT+TGG | - | chr8.3:21106252-21106271 | MS.gene72347:intron | 55.0% | |
| TTGTAGTCATTCGCCGTGGG+TGG | - | chr8.3:21104355-21104374 | MS.gene72347:intron | 55.0% | |
| ! | CCTTCCCTCCTCCCTTTTTG+AGG | - | chr8.3:21104015-21104034 | MS.gene72347:intron | 55.0% |
| !! | GCAATGGCACTGATGCTCAG+TGG | - | chr8.3:21107696-21107715 | MS.gene72347:intron | 55.0% |
| !! | TCCCTCCTCCCTTTTTGAGG+TGG | - | chr8.3:21104018-21104037 | MS.gene72347:intron | 55.0% |
| !! | TGGCGACTAGAGTGTCGAAC+TGG | + | chr8.3:21106243-21106262 | None:intergenic | 55.0% |
| !!! | CCCTCCTCCCTTTTTGAGGT+GGG | - | chr8.3:21104019-21104038 | MS.gene72347:intron | 55.0% |
| !!! | CCTCCTCCCTTTTTGAGGTG+GGG | - | chr8.3:21104020-21104039 | MS.gene72347:intron | 55.0% |
| !!! | CTCCTCCCTTTTTGAGGTGG+GGG | - | chr8.3:21104021-21104040 | MS.gene72347:intron | 55.0% |
| !!! | TCCTCCCTTTTTGAGGTGGG+GGG | - | chr8.3:21104022-21104041 | MS.gene72347:intron | 55.0% |
| ACCCCCCACCTCAAAAAGGG+AGG | + | chr8.3:21104026-21104045 | None:intergenic | 60.0% | |
| ACGAGGCCGAAGGGAGAAAG+AGG | + | chr8.3:21103651-21103670 | None:intergenic | 60.0% | |
| CCCCACCTCAAAAAGGGAGG+AGG | + | chr8.3:21104023-21104042 | None:intergenic | 60.0% | |
| CGACACTCTAGTCGCCACCT+TGG | - | chr8.3:21106246-21106265 | MS.gene72347:intron | 60.0% | |
| CGAGGCCGAAGGGAGAAAGA+GGG | + | chr8.3:21103650-21103669 | None:intergenic | 60.0% | |
| GAGGGAAGGCTCCAGACTAG+TGG | + | chr8.3:21104004-21104023 | None:intergenic | 60.0% | |
| GCCGAAGGGAGAAAGAGGGT+CGG | + | chr8.3:21103646-21103665 | None:intergenic | 60.0% | |
| GGCATCAAGGCCCTTAGCAC+AGG | + | chr8.3:21103947-21103966 | None:intergenic | 60.0% | |
| ! | GAGGTGGGGGGTTTGTTCTC+TGG | - | chr8.3:21104034-21104053 | MS.gene72347:intron | 60.0% |
| ! | GGCCTTGATGCCACTTGCAG+AGG | - | chr8.3:21103955-21103974 | MS.gene72347:intron | 60.0% |
| TGGCGGTGCACGAGGCCGAA+GGG | + | chr8.3:21103660-21103679 | None:intergenic | 70.0% | |
| !! | CGGTTTGGTGGCGGTGCACG+AGG | + | chr8.3:21103668-21103687 | None:intergenic | 70.0% |
| GTGGCGGTGCACGAGGCCGA+AGG | + | chr8.3:21103661-21103680 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 21103380 | 21108212 | 21103380 | ID=MS.gene72347 |
| chr8.3 | mRNA | 21103380 | 21108212 | 21103380 | ID=MS.gene72347.t1;Parent=MS.gene72347 |
| chr8.3 | exon | 21108141 | 21108212 | 21108141 | ID=MS.gene72347.t1.exon1;Parent=MS.gene72347.t1 |
| chr8.3 | CDS | 21108141 | 21108212 | 21108141 | ID=cds.MS.gene72347.t1;Parent=MS.gene72347.t1 |
| chr8.3 | exon | 21106791 | 21106922 | 21106791 | ID=MS.gene72347.t1.exon2;Parent=MS.gene72347.t1 |
| chr8.3 | CDS | 21106791 | 21106922 | 21106791 | ID=cds.MS.gene72347.t1;Parent=MS.gene72347.t1 |
| chr8.3 | exon | 21106634 | 21106672 | 21106634 | ID=MS.gene72347.t1.exon3;Parent=MS.gene72347.t1 |
| chr8.3 | CDS | 21106634 | 21106672 | 21106634 | ID=cds.MS.gene72347.t1;Parent=MS.gene72347.t1 |
| chr8.3 | exon | 21106371 | 21106476 | 21106371 | ID=MS.gene72347.t1.exon4;Parent=MS.gene72347.t1 |
| chr8.3 | CDS | 21106371 | 21106476 | 21106371 | ID=cds.MS.gene72347.t1;Parent=MS.gene72347.t1 |
| chr8.3 | exon | 21106030 | 21106088 | 21106030 | ID=MS.gene72347.t1.exon5;Parent=MS.gene72347.t1 |
| chr8.3 | CDS | 21106030 | 21106088 | 21106030 | ID=cds.MS.gene72347.t1;Parent=MS.gene72347.t1 |
| chr8.3 | exon | 21105831 | 21105905 | 21105831 | ID=MS.gene72347.t1.exon6;Parent=MS.gene72347.t1 |
| chr8.3 | CDS | 21105831 | 21105905 | 21105831 | ID=cds.MS.gene72347.t1;Parent=MS.gene72347.t1 |
| chr8.3 | exon | 21104203 | 21104251 | 21104203 | ID=MS.gene72347.t1.exon7;Parent=MS.gene72347.t1 |
| chr8.3 | CDS | 21104203 | 21104251 | 21104203 | ID=cds.MS.gene72347.t1;Parent=MS.gene72347.t1 |
| chr8.3 | exon | 21103703 | 21103779 | 21103703 | ID=MS.gene72347.t1.exon8;Parent=MS.gene72347.t1 |
| chr8.3 | CDS | 21103703 | 21103779 | 21103703 | ID=cds.MS.gene72347.t1;Parent=MS.gene72347.t1 |
| chr8.3 | exon | 21103380 | 21103478 | 21103380 | ID=MS.gene72347.t1.exon9;Parent=MS.gene72347.t1 |
| chr8.3 | CDS | 21103380 | 21103478 | 21103380 | ID=cds.MS.gene72347.t1;Parent=MS.gene72347.t1 |
| Gene Sequence |
| Protein sequence |
