AlfalfaGEDB | MS.gene47134

M. sativa cultivar XinJiangDaYe / MS.gene47134

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9 PF13833.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene47134.t1	XP_003618823.1	98.6	140	2	0	1	140	3	142	9.10E-73	282.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene47134.t1	Q8RYJ8	54.3	138	59	2	6	139	7	144	7.2e-34	144.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene47134.t1	G7KNL8	98.6	140	2	0	1	140	3	142	6.6e-73	282.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049567	MS.gene47134	0.803327	3.67E-49	-1.69E-46
MS.gene052493	MS.gene47134	0.831007	2.13E-55	-1.69E-46
MS.gene053094	MS.gene47134	0.8021	6.59E-49	-1.69E-46
MS.gene053298	MS.gene47134	0.80185	7.41E-49	-1.69E-46
MS.gene05439	MS.gene47134	0.838258	3.20E-57	-1.69E-46
MS.gene054892	MS.gene47134	0.818697	1.71E-52	-1.69E-46
MS.gene054893	MS.gene47134	0.816701	4.83E-52	-1.69E-46
MS.gene055226	MS.gene47134	0.815232	1.03E-51	-1.69E-46
MS.gene055827	MS.gene47134	0.814488	1.50E-51	-1.69E-46
MS.gene058429	MS.gene47134	0.801249	9.84E-49	-1.69E-46
MS.gene059774	MS.gene47134	0.824686	7.05E-54	-1.69E-46
MS.gene060412	MS.gene47134	0.847881	8.74E-60	-1.69E-46
MS.gene060413	MS.gene47134	0.80216	6.40E-49	-1.69E-46
MS.gene060697	MS.gene47134	0.824213	9.12E-54	-1.69E-46
MS.gene061047	MS.gene47134	0.83331	5.74E-56	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene47134	MS.gene85596	PPI
MS.gene47134	MS.gene96922	PPI
MS.gene47134	MS.gene80013	PPI
MS.gene013748	MS.gene47134	PPI
MS.gene47134	MS.gene64314	PPI
MS.gene28338	MS.gene47134	PPI
MS.gene94551	MS.gene47134	PPI
MS.gene65954	MS.gene47134	PPI
MS.gene008225	MS.gene47134	PPI
MS.gene056383	MS.gene47134	PPI
MS.gene47134	MS.gene046988	PPI
MS.gene47134	MS.gene057293	PPI
MS.gene47134	MS.gene53650	PPI
MS.gene64324	MS.gene47134	PPI
MS.gene47134	MS.gene02545	PPI
MS.gene015470	MS.gene47134	PPI
MS.gene015658	MS.gene47134	PPI
MS.gene024717	MS.gene47134	PPI
MS.gene47134	MS.gene79028	PPI
MS.gene64308	MS.gene47134	PPI
MS.gene22553	MS.gene47134	PPI
MS.gene53662	MS.gene47134	PPI
MS.gene003880	MS.gene47134	PPI
MS.gene54637	MS.gene47134	PPI
MS.gene67281	MS.gene47134	PPI
MS.gene47134	MS.gene026940	PPI
MS.gene025777	MS.gene47134	PPI
MS.gene47134	MS.gene025797	PPI
MS.gene47134	MS.gene21931	PPI
MS.gene21155	MS.gene47134	PPI
MS.gene92775	MS.gene47134	PPI
MS.gene47134	MS.gene53659	PPI
MS.gene47134	MS.gene09960	PPI
MS.gene21932	MS.gene47134	PPI
MS.gene47134	MS.gene061768	PPI
MS.gene47134	MS.gene017446	PPI
MS.gene47134	MS.gene96914	PPI
MS.gene47134	MS.gene066862	PPI
MS.gene47134	MS.gene96913	PPI
MS.gene87673	MS.gene47134	PPI
MS.gene05284	MS.gene47134	PPI
MS.gene041795	MS.gene47134	PPI
MS.gene63000	MS.gene47134	PPI
MS.gene47134	MS.gene93763	PPI
MS.gene47134	MS.gene80012	PPI
MS.gene80011	MS.gene47134	PPI
MS.gene96914	MS.gene47134	PPI
MS.gene53648	MS.gene47134	PPI
MS.gene070168	MS.gene47134	PPI
MS.gene017446	MS.gene47134	PPI
MS.gene47134	MS.gene026618	PPI
MS.gene038456	MS.gene47134	PPI
MS.gene052672	MS.gene47134	PPI
MS.gene47134	MS.gene008831	PPI
MS.gene47134	MS.gene056461	PPI
MS.gene004899	MS.gene47134	PPI
MS.gene47134	MS.gene98972	PPI
MS.gene25186	MS.gene47134	PPI
MS.gene47134	MS.gene89216	PPI
MS.gene009021	MS.gene47134	PPI
MS.gene47134	MS.gene47195	PPI
MS.gene020515	MS.gene47134	PPI
MS.gene070167	MS.gene47134	PPI
MS.gene47134	MS.gene07422	PPI
MS.gene04915	MS.gene47134	PPI
MS.gene64327	MS.gene47134	PPI
MS.gene47134	MS.gene64316	PPI
MS.gene63281	MS.gene47134	PPI
MS.gene47134	MS.gene03228	PPI
MS.gene68345	MS.gene47134	PPI
MS.gene066863	MS.gene47134	PPI
MS.gene036930	MS.gene47134	PPI
MS.gene47134	MS.gene46237	PPI
MS.gene001246	MS.gene47134	PPI
MS.gene040127	MS.gene47134	PPI
MS.gene47134	MS.gene64317	PPI
MS.gene62258	MS.gene47134	PPI
MS.gene55545	MS.gene47134	PPI
MS.gene000724	MS.gene47134	PPI
MS.gene64311	MS.gene47134	PPI
MS.gene47134	MS.gene93087	PPI
MS.gene47134	MS.gene64310	PPI
MS.gene47134	MS.gene29459	PPI
MS.gene47134	MS.gene71207	PPI
MS.gene47134	MS.gene09934	PPI
MS.gene58906	MS.gene47134	PPI
MS.gene58860	MS.gene47134	PPI
MS.gene64313	MS.gene47134	PPI
MS.gene83068	MS.gene47134	PPI
MS.gene27516	MS.gene47134	PPI
MS.gene62689	MS.gene47134	PPI
MS.gene053319	MS.gene47134	PPI
MS.gene97948	MS.gene47134	PPI
MS.gene61009	MS.gene47134	PPI
MS.gene000738	MS.gene47134	PPI
MS.gene64307	MS.gene47134	PPI
MS.gene061261	MS.gene47134	PPI
MS.gene47134	MS.gene21696	PPI
MS.gene04917	MS.gene47134	PPI
MS.gene062239	MS.gene47134	PPI
MS.gene47134	MS.gene074045	PPI
MS.gene46886	MS.gene47134	PPI
MS.gene026530	MS.gene47134	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene47134.t1	MTR_6g023460	98.571	140	2	0	1	140	3	142	1.67e-98	279
MS.gene47134.t1	MTR_4g103655	61.194	134	52	0	6	139	6	139	3.31e-56	172
MS.gene47134.t1	MTR_4g103650	60.448	134	53	0	6	139	2	135	2.36e-55	170
MS.gene47134.t1	MTR_4g103630	59.701	134	54	0	6	139	6	139	4.54e-55	169
MS.gene47134.t1	MTR_3g089070	57.554	139	59	0	1	139	1	139	2.64e-54	167
MS.gene47134.t1	MTR_3g089090	57.664	137	58	0	3	139	2	138	3.80e-54	167
MS.gene47134.t1	MTR_8g078270	54.135	133	56	3	10	139	57	187	7.87e-40	132
MS.gene47134.t1	MTR_1g046950	42.029	138	69	2	9	139	7	140	1.78e-32	112
MS.gene47134.t1	MTR_3g067610	42.748	131	72	1	9	139	8	135	9.28e-32	110
MS.gene47134.t1	MTR_5g079340	42.105	133	73	2	9	139	7	137	1.90e-31	109
MS.gene47134.t1	MTR_8g107110	41.538	130	76	0	10	139	28	157	2.51e-29	105
MS.gene47134.t1	MTR_1g047100	39.416	137	73	2	9	139	7	139	2.45e-28	101
MS.gene47134.t1	MTR_4g067270	39.552	134	78	2	9	139	8	141	1.10e-26	97.8
MS.gene47134.t1	MTR_8g105230	40.625	128	75	1	10	136	40	167	1.28e-25	96.3
MS.gene47134.t1	MTR_6g079570	40.909	132	77	1	9	139	29	160	1.32e-25	95.9
MS.gene47134.t1	MTR_1g032070	36.842	133	83	1	9	140	49	181	2.84e-24	92.8
MS.gene47134.t1	MTR_7g075040	38.667	150	80	4	1	139	42	190	9.81e-24	91.3
MS.gene47134.t1	MTR_8g036075	37.063	143	81	3	6	139	49	191	1.04e-22	89.0
MS.gene47134.t1	MTR_8g066630	31.159	138	91	1	2	135	13	150	5.73e-22	86.3
MS.gene47134.t1	MTR_5g017550	32.824	131	88	0	10	140	52	182	1.70e-21	85.5
MS.gene47134.t1	MTR_5g008705	36.641	131	74	2	14	139	2	128	3.30e-21	83.2
MS.gene47134.t1	MTR_1g076650	32.143	140	94	1	2	140	8	147	4.59e-21	83.6
MS.gene47134.t1	MTR_1g076650	40.299	67	40	0	73	139	7	73	9.36e-12	59.3
MS.gene47134.t1	MTR_5g017510	34.091	132	86	1	10	140	52	183	9.72e-21	83.6
MS.gene47134.t1	MTR_5g017560	34.091	132	86	1	10	140	52	183	9.72e-21	83.6
MS.gene47134.t1	MTR_7g087610	28.571	140	99	1	2	140	8	147	4.12e-20	80.9
MS.gene47134.t1	MTR_7g089760	35.075	134	84	2	9	139	8	141	4.24e-20	80.9
MS.gene47134.t1	MTR_4g086260	33.846	130	85	1	10	139	61	189	4.81e-20	82.0
MS.gene47134.t1	MTR_1g041285	31.429	140	95	1	2	140	8	147	3.86e-19	78.6
MS.gene47134.t1	MTR_1g071150	28.777	139	99	0	2	140	8	146	4.01e-19	78.2
MS.gene47134.t1	MTR_6g025320	27.857	140	100	1	2	140	8	147	1.08e-18	77.4
MS.gene47134.t1	MTR_4g112460	30.282	142	96	1	1	139	6	147	2.02e-18	77.0
MS.gene47134.t1	MTR_5g088320	27.143	140	101	1	2	140	8	147	5.70e-18	75.5
MS.gene47134.t1	MTR_5g088320	37.313	67	42	0	73	139	7	73	7.22e-11	57.0
MS.gene47134.t1	MTR_2g098890	35.294	136	83	2	9	139	67	202	3.56e-17	74.7
MS.gene47134.t1	MTR_4g115170	34.667	150	79	3	9	139	67	216	6.06e-17	74.3
MS.gene47134.t1	MTR_5g027000	29.286	140	98	1	1	139	17	156	7.34e-17	72.8
MS.gene47134.t1	MTR_5g008695	34.783	115	64	2	31	138	2	112	9.72e-17	71.2
MS.gene47134.t1	MTR_7g074240	32.639	144	84	2	9	139	27	170	2.04e-16	72.0
MS.gene47134.t1	MTR_3g083470	32.331	133	79	3	9	140	96	218	2.40e-16	72.8
MS.gene47134.t1	MTR_1g030440	33.803	142	77	2	10	140	26	161	7.38e-16	70.5
MS.gene47134.t1	MTR_8g069915	26.950	141	100	1	2	139	8	148	7.45e-16	70.5
MS.gene47134.t1	MTR_1g026190	27.068	133	92	2	9	139	390	519	6.24e-13	65.1
MS.gene47134.t1	MTR_7g090450	30.556	144	86	4	6	139	73	212	2.90e-12	61.6
MS.gene47134.t1	MTR_5g089320	27.820	133	91	2	9	139	376	505	8.53e-12	61.6
MS.gene47134.t1	MTR_6g007613	29.771	131	91	1	10	139	33	163	1.12e-11	59.3
MS.gene47134.t1	MTR_3g088655	32.903	155	79	5	5	140	7	155	1.16e-11	59.3
MS.gene47134.t1	MTR_5g009830	27.273	132	91	2	10	139	375	503	2.13e-11	60.5
MS.gene47134.t1	MTR_8g099095	28.030	132	90	2	10	139	375	503	2.17e-11	60.5
MS.gene47134.t1	MTR_5g079470	39.683	63	37	1	9	71	13	74	2.54e-11	56.6
MS.gene47134.t1	MTR_0168s0120	26.606	109	79	1	33	140	3	111	3.46e-11	57.0
MS.gene47134.t1	MTR_6g025320	26.606	109	79	1	33	140	3	111	3.46e-11	57.0
MS.gene47134.t1	MTR_7g074020	29.008	131	92	1	10	139	34	164	3.54e-11	58.2
MS.gene47134.t1	MTR_7g068710	28.462	130	93	0	10	139	365	494	5.20e-11	59.3
MS.gene47134.t1	MTR_5g092810	28.030	132	90	2	10	139	401	529	5.53e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene47134.t1	AT1G76650	49.275	138	70	0	2	139	39	176	5.16e-42	137
MS.gene47134.t1	AT1G76650	49.275	138	70	0	2	139	39	176	5.16e-42	137
MS.gene47134.t1	AT1G76640	50.376	133	63	1	10	139	26	158	2.09e-40	133
MS.gene47134.t1	AT3G50770	48.175	137	65	2	9	139	67	203	5.36e-38	128
MS.gene47134.t1	AT5G42380	49.275	138	68	1	4	139	47	184	3.92e-37	125
MS.gene47134.t1	AT3G01830	48.592	142	68	3	1	139	6	145	1.72e-36	122
MS.gene47134.t1	AT1G76650	44.928	138	66	1	2	139	39	166	1.26e-35	121
MS.gene47134.t1	AT5G37770	43.382	136	72	1	9	139	20	155	9.54e-32	111
MS.gene47134.t1	AT5G37770	43.382	136	72	1	9	139	20	155	9.54e-32	111
MS.gene47134.t1	AT1G66400	37.778	135	81	1	9	140	18	152	1.81e-27	100
MS.gene47134.t1	AT1G24620	39.695	131	78	1	10	139	41	171	5.74e-26	97.1
MS.gene47134.t1	AT1G18210	38.168	131	78	1	9	139	26	153	7.59e-25	93.6
MS.gene47134.t1	AT1G18210	38.168	131	78	1	9	139	26	153	7.59e-25	93.6
MS.gene47134.t1	AT5G17470	36.567	134	80	2	10	139	6	138	2.22e-24	91.7
MS.gene47134.t1	AT1G73630	36.641	131	80	1	9	139	23	150	4.59e-24	91.7
MS.gene47134.t1	AT1G05990	37.410	139	83	2	5	139	4	142	6.31e-24	90.9
MS.gene47134.t1	AT2G43290	35.211	142	78	3	9	139	68	206	3.05e-22	88.2
MS.gene47134.t1	AT3G59440	35.338	133	84	1	9	139	54	186	1.20e-21	86.3
MS.gene47134.t1	AT4G12860	37.313	134	81	2	9	139	8	141	1.31e-21	84.7
MS.gene47134.t1	AT4G03290	35.461	141	85	2	5	139	4	144	2.08e-21	84.3
MS.gene47134.t1	AT3G07490	36.567	134	82	2	9	139	8	141	1.26e-20	82.4
MS.gene47134.t1	AT2G36180	35.294	136	80	3	10	139	4	137	2.59e-20	81.3
MS.gene47134.t1	AT2G15680	33.333	138	87	2	4	139	48	182	3.19e-20	82.0
MS.gene47134.t1	AT2G41100	30.263	152	88	1	2	135	62	213	7.41e-20	83.2
MS.gene47134.t1	AT2G41100	30.263	152	88	1	2	135	62	213	7.41e-20	83.2
MS.gene47134.t1	AT2G41100	30.263	152	88	1	2	135	62	213	7.41e-20	83.2
MS.gene47134.t1	AT2G41100	30.263	152	88	1	2	135	97	248	1.05e-19	83.2
MS.gene47134.t1	AT2G41100	29.677	155	92	1	2	139	8	162	1.55e-19	82.8
MS.gene47134.t1	AT2G41100	30.263	152	88	1	2	135	97	248	1.05e-19	83.2
MS.gene47134.t1	AT2G41100	29.677	155	92	1	2	139	8	162	1.55e-19	82.8
MS.gene47134.t1	AT4G14640	31.944	144	89	2	2	140	9	148	2.97e-19	79.0
MS.gene47134.t1	AT3G01830	45.045	111	54	3	1	107	6	113	3.40e-19	78.2
MS.gene47134.t1	AT5G21274	28.571	140	99	1	2	140	8	147	5.06e-19	78.2
MS.gene47134.t1	AT3G22930	29.286	140	98	1	2	140	31	170	9.00e-19	78.2
MS.gene47134.t1	AT3G56800	27.857	140	100	1	2	140	8	147	9.43e-19	77.4
MS.gene47134.t1	AT2G27030	27.857	140	100	1	2	140	8	147	9.43e-19	77.4
MS.gene47134.t1	AT2G41110	27.857	140	100	1	2	140	8	147	9.43e-19	77.4
MS.gene47134.t1	AT3G43810	27.857	140	100	1	2	140	8	147	1.13e-18	77.4
MS.gene47134.t1	AT5G37780	27.143	140	101	1	2	140	8	147	1.72e-18	76.6
MS.gene47134.t1	AT5G37780	37.313	67	42	0	73	139	7	73	7.49e-11	57.0
MS.gene47134.t1	AT1G66410	27.143	140	101	1	2	140	8	147	1.72e-18	76.6
MS.gene47134.t1	AT1G66410	37.313	67	42	0	73	139	7	73	7.49e-11	57.0
MS.gene47134.t1	AT1G18530	31.206	141	94	2	2	139	3	143	1.92e-18	77.0
MS.gene47134.t1	AT2G27030	27.857	140	100	1	2	140	8	147	3.10e-18	77.0
MS.gene47134.t1	AT3G43810	27.857	140	100	1	2	140	8	147	7.13e-18	76.6
MS.gene47134.t1	AT3G50360	32.824	131	87	1	10	139	31	161	7.68e-17	73.2
MS.gene47134.t1	AT1G32250	29.787	141	92	2	2	135	12	152	8.46e-17	72.8
MS.gene47134.t1	AT3G03400	34.884	129	75	4	10	132	9	134	8.89e-17	72.0
MS.gene47134.t1	AT2G41110	25.658	152	100	2	2	140	8	159	1.94e-16	71.6
MS.gene47134.t1	AT3G25600	29.078	141	97	2	2	139	8	148	5.18e-16	70.5
MS.gene47134.t1	AT4G37010	29.771	131	91	1	10	139	31	161	1.46e-15	69.7
MS.gene47134.t1	AT4G37010	29.771	131	91	1	10	139	35	165	1.55e-15	69.7
MS.gene47134.t1	AT3G51920	27.143	140	101	1	2	140	8	147	8.01e-15	67.4
MS.gene47134.t1	AT3G03000	30.147	136	93	1	2	135	16	151	9.69e-15	67.4
MS.gene47134.t1	AT5G37780	24.516	155	101	2	2	140	8	162	1.91e-14	66.6
MS.gene47134.t1	AT3G10190	28.676	136	95	2	6	139	70	205	2.60e-14	67.0
MS.gene47134.t1	AT4G14640	30.952	126	78	2	20	140	9	130	1.19e-13	63.9
MS.gene47134.t1	AT2G41410	30.070	143	96	3	2	140	66	208	2.16e-13	64.7
MS.gene47134.t1	AT3G03410	30.303	132	84	1	9	140	5	128	3.01e-13	62.8
MS.gene47134.t1	AT2G41090	24.638	138	102	1	3	140	9	144	3.66e-13	63.9
MS.gene47134.t1	AT4G04695	28.462	130	92	1	10	139	340	468	4.75e-13	65.5
MS.gene47134.t1	AT5G37780	27.049	122	88	1	20	140	13	134	4.87e-13	62.4
MS.gene47134.t1	AT1G66410	27.049	122	88	1	20	140	36	157	6.06e-13	62.8
MS.gene47134.t1	AT5G37780	27.049	122	88	1	20	140	52	173	7.51e-13	62.8
MS.gene47134.t1	AT1G12310	31.206	141	92	2	2	140	9	146	8.94e-13	62.0
MS.gene47134.t1	AT4G20780	30.921	152	84	3	9	139	32	183	1.90e-12	62.0
MS.gene47134.t1	AT1G62820	30.496	141	93	2	2	140	9	146	3.28e-12	60.5
MS.gene47134.t1	AT3G51850	32.331	133	84	3	10	139	363	492	4.64e-12	62.4
MS.gene47134.t1	AT1G66410	26.606	109	79	1	33	140	3	111	1.02e-11	58.2
MS.gene47134.t1	AT1G66410	26.606	109	79	1	33	140	3	111	1.02e-11	58.2
MS.gene47134.t1	AT4G04700	28.788	132	89	2	10	139	340	468	1.62e-11	60.8
MS.gene47134.t1	AT2G31500	29.078	141	97	2	2	139	367	507	1.65e-11	60.8
MS.gene47134.t1	AT1G76040	30.075	133	88	2	9	139	181	310	1.89e-11	60.5
MS.gene47134.t1	AT1G76040	30.075	133	88	2	9	139	181	310	1.89e-11	60.5
MS.gene47134.t1	AT1G74740	30.534	131	89	2	10	139	368	497	2.62e-11	60.5
MS.gene47134.t1	AT1G76040	30.075	133	88	2	9	139	419	548	3.17e-11	60.1
MS.gene47134.t1	AT3G43810	26.606	109	79	1	33	140	3	111	3.63e-11	57.0
MS.gene47134.t1	AT3G43810	26.606	109	79	1	33	140	3	111	3.63e-11	57.0
MS.gene47134.t1	AT5G12180	29.545	132	88	2	10	139	382	510	4.71e-11	59.7
MS.gene47134.t1	AT4G23650	28.030	132	90	2	10	139	387	515	7.13e-11	58.9
MS.gene47134.t1	AT5G19360	28.788	132	89	2	10	139	377	505	9.06e-11	58.9

Find 43 sgRNAs with CRISPR-Local

Find 49 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCAACCACTTTGATGAAAA+TGG	0.221308	6.3:-16714048	MS.gene47134:CDS
ATTTCTCAATTTGACATTGA+TGG	0.261073	6.3:-16713724	MS.gene47134:CDS
CGCCTCCTCGTTCGACATCT+TGG	0.273549	6.3:+16713972	None:intergenic
AGCATTCTCTTAAGACTCTT+TGG	0.286525	6.3:+16713793	None:intergenic
TAAGAGAATGCTTGGAAGAT+TGG	0.354871	6.3:-16713782	MS.gene47134:CDS
GTCGAACGAGGAGGCGGAAA+TGG	0.371555	6.3:-16713965	MS.gene47134:CDS
CGGCAATGTGTGGAGGCAAT+CGG	0.378283	6.3:-16713997	MS.gene47134:CDS
CAATTTGACATTGATGGAGA+TGG	0.399838	6.3:-16713718	MS.gene47134:CDS
GGCAATGTGTGGAGGCAATC+GGG	0.408198	6.3:-16713996	MS.gene47134:CDS
GTTTGTAGAGGGAGGGAAAG+AGG	0.418412	6.3:-16713884	MS.gene47134:CDS
AAGAGAATGCTTGGAAGATT+GGG	0.420123	6.3:-16713781	MS.gene47134:CDS
TTCTCGACTCGGACGGGGAT+GGG	0.440025	6.3:-16713933	MS.gene47134:CDS
TCGGACGGGGATGGGTTAGT+TGG	0.440699	6.3:-16713925	MS.gene47134:CDS
TTGAGCTTCTCGACTCGGAC+GGG	0.442068	6.3:-16713939	MS.gene47134:CDS
CGGGGATGGGTTAGTTGGGT+TGG	0.451530	6.3:-16713920	MS.gene47134:CDS
CGGACGGGGATGGGTTAGTT+GGG	0.453908	6.3:-16713924	MS.gene47134:CDS
AAGAGTCTTAAGAGAATGCT+TGG	0.464880	6.3:-16713790	MS.gene47134:CDS
TTGTGAAGTTTGTAGAGGGA+GGG	0.474275	6.3:-16713891	MS.gene47134:CDS
TCCTAAATTCATCAAAACTA+AGG	0.475085	6.3:+16713692	None:intergenic
CTTCTCGACTCGGACGGGGA+TGG	0.478951	6.3:-16713934	MS.gene47134:CDS
AATTTGACATTGATGGAGAT+GGG	0.498825	6.3:-16713717	MS.gene47134:CDS
TTTGTGAAGTTTGTAGAGGG+AGG	0.500405	6.3:-16713892	MS.gene47134:CDS
ACATCTTAAAAGCTTCCCTT+AGG	0.513431	6.3:+16713845	None:intergenic
AAGAGAAAGTGAATGACCTA+AGG	0.518435	6.3:-16713861	MS.gene47134:CDS
GGCGGTTGAGCTTCTCGACT+CGG	0.522065	6.3:-16713944	MS.gene47134:CDS
CACTTTGATGAAAATGGAGA+TGG	0.524653	6.3:-16714042	MS.gene47134:CDS
GTCGGAGCTGCGGCAATGTG+TGG	0.526902	6.3:-16714007	MS.gene47134:CDS
CAAGATGTCGAACGAGGAGG+CGG	0.533170	6.3:-16713971	MS.gene47134:CDS
TTTAAGATGTATGAAATGGA+GGG	0.540787	6.3:-16713832	MS.gene47134:CDS
GTTGAGCTTCTCGACTCGGA+CGG	0.543058	6.3:-16713940	MS.gene47134:CDS
TGAGCTTCTCGACTCGGACG+GGG	0.549367	6.3:-16713938	MS.gene47134:CDS
AGAGAAAGTGAATGACCTAA+GGG	0.570683	6.3:-16713860	MS.gene47134:CDS
ACACATTGCCGCAGCTCCGA+CGG	0.580783	6.3:+16714009	None:intergenic
AAATATCACCGTCGGAGCTG+CGG	0.585133	6.3:-16714017	MS.gene47134:CDS
ATGTATGAAATGGAGGGGTG+TGG	0.585987	6.3:-16713826	MS.gene47134:CDS
TTAAGATGTATGAAATGGAG+GGG	0.595061	6.3:-16713831	MS.gene47134:CDS
GAACGAGGAGGCGGAAATGG+CGG	0.597662	6.3:-16713962	MS.gene47134:CDS
GCAATGTGTGGAGGCAATCG+GGG	0.601893	6.3:-16713995	MS.gene47134:CDS
GGAGCTGCGGCAATGTGTGG+AGG	0.609680	6.3:-16714004	MS.gene47134:CDS
ATTTGACATTGATGGAGATG+GGG	0.633515	6.3:-16713716	MS.gene47134:CDS
TATAGATATGGTAATGGACA+AGG	0.640672	6.3:-16714091	None:intergenic
CGGGGCCAAGATGTCGAACG+AGG	0.661203	6.3:-16713977	MS.gene47134:CDS
GGCCAAGATGTCGAACGAGG+AGG	0.678288	6.3:-16713974	MS.gene47134:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATTTCTCAATTTGACATTGA+TGG	-	chr6.3:16714032-16714051	MS.gene47134:CDS	25.0%
!	TCCTAAATTCATCAAAACTA+AGG	+	chr6.3:16714067-16714086	None:intergenic	25.0%
!!	TTTAAGATGTATGAAATGGA+GGG	-	chr6.3:16713924-16713943	MS.gene47134:CDS	25.0%
!!!	AGCTTTTAAGATGTATGAAA+TGG	-	chr6.3:16713920-16713939	MS.gene47134:CDS	25.0%
!!!	TCCTTAGTTTTGATGAATTT+AGG	-	chr6.3:16714063-16714082	MS.gene47134:CDS	25.0%
!!!	TTTTAAGATGTATGAAATGG+AGG	-	chr6.3:16713923-16713942	MS.gene47134:CDS	25.0%
	AATTTGACATTGATGGAGAT+GGG	-	chr6.3:16714039-16714058	MS.gene47134:CDS	30.0%
	TTAAGATGTATGAAATGGAG+GGG	-	chr6.3:16713925-16713944	MS.gene47134:CDS	30.0%
	TTCAACCACTTTGATGAAAA+TGG	-	chr6.3:16713708-16713727	MS.gene47134:CDS	30.0%
!	GATTTTGTGAAGTTTGTAGA+GGG	-	chr6.3:16713861-16713880	MS.gene47134:CDS	30.0%
!	TGATTTTGTGAAGTTTGTAG+AGG	-	chr6.3:16713860-16713879	MS.gene47134:CDS	30.0%
	AAGAGAAAGTGAATGACCTA+AGG	-	chr6.3:16713895-16713914	MS.gene47134:CDS	35.0%
	AAGAGAATGCTTGGAAGATT+GGG	-	chr6.3:16713975-16713994	MS.gene47134:CDS	35.0%
	AAGAGTCTTAAGAGAATGCT+TGG	-	chr6.3:16713966-16713985	MS.gene47134:CDS	35.0%
	ACATCTTAAAAGCTTCCCTT+AGG	+	chr6.3:16713914-16713933	None:intergenic	35.0%
	AGAGAAAGTGAATGACCTAA+GGG	-	chr6.3:16713896-16713915	MS.gene47134:CDS	35.0%
	AGATGGAAAAATATCACCGT+CGG	-	chr6.3:16713731-16713750	MS.gene47134:CDS	35.0%
	AGCATTCTCTTAAGACTCTT+TGG	+	chr6.3:16713966-16713985	None:intergenic	35.0%
	ATTTGACATTGATGGAGATG+GGG	-	chr6.3:16714040-16714059	MS.gene47134:CDS	35.0%
	CAATTTGACATTGATGGAGA+TGG	-	chr6.3:16714038-16714057	MS.gene47134:CDS	35.0%
	CACTTTGATGAAAATGGAGA+TGG	-	chr6.3:16713714-16713733	MS.gene47134:CDS	35.0%
	TAAGAGAATGCTTGGAAGAT+TGG	-	chr6.3:16713974-16713993	MS.gene47134:CDS	35.0%
!	CATCTCCATTTTCATCAAAG+TGG	+	chr6.3:16713716-16713735	None:intergenic	35.0%
	TTGTGAAGTTTGTAGAGGGA+GGG	-	chr6.3:16713865-16713884	MS.gene47134:CDS	40.0%
	TTTGTGAAGTTTGTAGAGGG+AGG	-	chr6.3:16713864-16713883	MS.gene47134:CDS	40.0%
	ATGTATGAAATGGAGGGGTG+TGG	-	chr6.3:16713930-16713949	MS.gene47134:CDS	45.0%
	AAATATCACCGTCGGAGCTG+CGG	-	chr6.3:16713739-16713758	MS.gene47134:CDS	50.0%
	GTTTGTAGAGGGAGGGAAAG+AGG	-	chr6.3:16713872-16713891	MS.gene47134:CDS	50.0%
	CAAGATGTCGAACGAGGAGG+CGG	-	chr6.3:16713785-16713804	MS.gene47134:CDS	55.0%
	CGGCAATGTGTGGAGGCAAT+CGG	-	chr6.3:16713759-16713778	MS.gene47134:CDS	55.0%
	GCAATGTGTGGAGGCAATCG+GGG	-	chr6.3:16713761-16713780	MS.gene47134:CDS	55.0%
	GGCAATGTGTGGAGGCAATC+GGG	-	chr6.3:16713760-16713779	MS.gene47134:CDS	55.0%
!!	GTTGAGCTTCTCGACTCGGA+CGG	-	chr6.3:16713816-16713835	MS.gene47134:CDS	55.0%
!!	TTGAGCTTCTCGACTCGGAC+GGG	-	chr6.3:16713817-16713836	MS.gene47134:CDS	55.0%
	ACACATTGCCGCAGCTCCGA+CGG	+	chr6.3:16713750-16713769	None:intergenic	60.0%
	CGCCTCCTCGTTCGACATCT+TGG	+	chr6.3:16713787-16713806	None:intergenic	60.0%
	GAACGAGGAGGCGGAAATGG+CGG	-	chr6.3:16713794-16713813	MS.gene47134:CDS	60.0%
	GGCCAAGATGTCGAACGAGG+AGG	-	chr6.3:16713782-16713801	MS.gene47134:CDS	60.0%
	GGCGGTTGAGCTTCTCGACT+CGG	-	chr6.3:16713812-16713831	MS.gene47134:CDS	60.0%
	GTCGAACGAGGAGGCGGAAA+TGG	-	chr6.3:16713791-16713810	MS.gene47134:CDS	60.0%
!!	CGGACGGGGATGGGTTAGTT+GGG	-	chr6.3:16713832-16713851	MS.gene47134:CDS	60.0%
!!	CGGGGATGGGTTAGTTGGGT+TGG	-	chr6.3:16713836-16713855	MS.gene47134:CDS	60.0%
!!	TCGGACGGGGATGGGTTAGT+TGG	-	chr6.3:16713831-16713850	MS.gene47134:CDS	60.0%
!!	TGAGCTTCTCGACTCGGACG+GGG	-	chr6.3:16713818-16713837	MS.gene47134:CDS	60.0%
!!	TTCTCGACTCGGACGGGGAT+GGG	-	chr6.3:16713823-16713842	MS.gene47134:CDS	60.0%
	CGGGGCCAAGATGTCGAACG+AGG	-	chr6.3:16713779-16713798	MS.gene47134:CDS	65.0%
	GGAGCTGCGGCAATGTGTGG+AGG	-	chr6.3:16713752-16713771	MS.gene47134:CDS	65.0%
	GTCGGAGCTGCGGCAATGTG+TGG	-	chr6.3:16713749-16713768	MS.gene47134:CDS	65.0%
!!	CTTCTCGACTCGGACGGGGA+TGG	-	chr6.3:16713822-16713841	MS.gene47134:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.3	gene	16713678	16714100	16713678	ID=MS.gene47134
chr6.3	mRNA	16713678	16714100	16713678	ID=MS.gene47134.t1;Parent=MS.gene47134
chr6.3	exon	16713678	16714100	16713678	ID=MS.gene47134.t1.exon1;Parent=MS.gene47134.t1
chr6.3	CDS	16713678	16714100	16713678	ID=cds.MS.gene47134.t1;Parent=MS.gene47134.t1

Gene Sequence

>MS.gene47134

ATGGACAAGGTGACTCAATACATACGTGTGTTCAACCACTTTGATGAAAATGGAGATGGAAAAATATCACCGTCGGAGCTGCGGCAATGTGTGGAGGCAATCGGGGCCAAGATGTCGAACGAGGAGGCGGAAATGGCGGTTGAGCTTCTCGACTCGGACGGGGATGGGTTAGTTGGGTTGGATGATTTTGTGAAGTTTGTAGAGGGAGGGAAAGAGGAAGAGAAAGTGAATGACCTAAGGGAAGCTTTTAAGATGTATGAAATGGAGGGGTGTGGTTGCATCACACCAAAGAGTCTTAAGAGAATGCTTGGAAGATTGGGTGAGTGTAGAAGTGTAGATGAATGTCAAGCTATGATTTCTCAATTTGACATTGATGGAGATGGGGTCCTTAGTTTTGATGAATTTAGGACAATGATGCTTTAA

Protein sequence

>MS.gene47134.t1

MDKVTQYIRVFNHFDENGDGKISPSELRQCVEAIGAKMSNEEAEMAVELLDSDGDGLVGLDDFVKFVEGGKEEEKVNDLREAFKMYEMEGCGCITPKSLKRMLGRLGECRSVDECQAMISQFDIDGDGVLSFDEFRTMML