AlfalfaGEDB | MS.gene35563

M. sativa cultivar XinJiangDaYe / MS.gene35563

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35563.t1	AES72346.1	95.5	44	2	0	1	44	1	44	2.50E-14	88.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35563.t1	G7J5J1	95.5	44	2	0	1	44	2	45	1.8e-14	88.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene04918	MS.gene35563	0.803749	3.00E-49	-1.69E-46
MS.gene04919	MS.gene35563	0.81059	1.07E-50	-1.69E-46
MS.gene04920	MS.gene35563	0.817337	3.47E-52	-1.69E-46
MS.gene049283	MS.gene35563	0.827752	1.32E-54	-1.69E-46
MS.gene049983	MS.gene35563	0.808333	3.26E-50	-1.69E-46
MS.gene04998	MS.gene35563	0.860979	1.42E-63	-1.69E-46
MS.gene050414	MS.gene35563	0.820566	6.41E-53	-1.69E-46
MS.gene050654	MS.gene35563	0.80599	1.02E-49	-1.69E-46
MS.gene051226	MS.gene35563	0.865446	5.87E-65	-1.69E-46
MS.gene052016	MS.gene35563	0.818925	1.52E-52	-1.69E-46
MS.gene052296	MS.gene35563	0.806495	8.00E-50	-1.69E-46
MS.gene053298	MS.gene35563	0.840633	7.73E-58	-1.69E-46
MS.gene054892	MS.gene35563	0.854609	1.10E-61	-1.69E-46
MS.gene054893	MS.gene35563	0.857298	1.80E-62	-1.69E-46
MS.gene057093	MS.gene35563	0.81873	1.68E-52	-1.69E-46
MS.gene057622	MS.gene35563	0.876047	1.90E-68	-1.69E-46
MS.gene058159	MS.gene35563	0.8054	1.36E-49	-1.69E-46
MS.gene058592	MS.gene35563	0.814435	1.54E-51	-1.69E-46
MS.gene060259	MS.gene35563	0.842433	2.59E-58	-1.69E-46
MS.gene060964	MS.gene35563	0.800134	1.66E-48	-1.69E-46
MS.gene061100	MS.gene35563	0.811913	5.52E-51	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene003880	MS.gene35563	PPI
MS.gene54637	MS.gene35563	PPI
MS.gene000738	MS.gene35563	PPI
MS.gene67281	MS.gene35563	PPI
MS.gene35563	MS.gene64311	PPI
MS.gene46886	MS.gene35563	PPI
MS.gene35563	MS.gene026940	PPI
MS.gene35563	MS.gene65954	PPI
MS.gene21155	MS.gene35563	PPI
MS.gene35563	MS.gene64327	PPI
MS.gene35563	MS.gene28338	PPI
MS.gene35563	MS.gene041795	PPI
MS.gene35563	MS.gene25186	PPI
MS.gene35563	MS.gene21931	PPI
MS.gene35563	MS.gene87673	PPI
MS.gene35563	MS.gene27516	PPI
MS.gene35563	MS.gene53659	PPI
MS.gene008225	MS.gene35563	PPI
MS.gene35563	MS.gene09960	PPI
MS.gene35563	MS.gene061768	PPI
MS.gene64324	MS.gene35563	PPI
MS.gene35563	MS.gene64308	PPI
MS.gene35563	MS.gene017446	PPI
MS.gene35563	MS.gene96914	PPI
MS.gene35563	MS.gene066862	PPI
MS.gene35563	MS.gene96913	PPI
MS.gene35563	MS.gene015658	PPI
MS.gene80011	MS.gene35563	PPI
MS.gene070168	MS.gene35563	PPI
MS.gene35563	MS.gene93763	PPI
MS.gene35563	MS.gene64313	PPI
MS.gene35563	MS.gene80012	PPI
MS.gene35563	MS.gene64307	PPI
MS.gene35563	MS.gene024717	PPI
MS.gene35563	MS.gene036930	PPI
MS.gene038456	MS.gene35563	PPI
MS.gene35563	MS.gene21932	PPI
MS.gene35563	MS.gene026618	PPI
MS.gene004899	MS.gene35563	PPI
MS.gene35563	MS.gene53648	PPI
MS.gene35563	MS.gene008831	PPI
MS.gene35563	MS.gene55545	PPI
MS.gene35563	MS.gene056461	PPI
MS.gene35563	MS.gene98972	PPI
MS.gene070167	MS.gene35563	PPI
MS.gene35563	MS.gene89216	PPI
MS.gene35563	MS.gene009021	PPI
MS.gene35563	MS.gene47195	PPI
MS.gene35563	MS.gene63281	PPI
MS.gene35563	MS.gene020515	PPI
MS.gene35563	MS.gene07422	PPI
MS.gene35563	MS.gene062239	PPI
MS.gene35563	MS.gene013748	PPI
MS.gene68345	MS.gene35563	PPI
MS.gene35563	MS.gene64316	PPI
MS.gene35563	MS.gene05284	PPI
MS.gene35563	MS.gene22553	PPI
MS.gene35563	MS.gene061261	PPI
MS.gene040127	MS.gene35563	PPI
MS.gene62258	MS.gene35563	PPI
MS.gene35563	MS.gene03228	PPI
MS.gene052672	MS.gene35563	PPI
MS.gene35563	MS.gene46237	PPI
MS.gene35563	MS.gene64317	PPI
MS.gene35563	MS.gene015470	PPI
MS.gene35563	MS.gene63000	PPI
MS.gene35563	MS.gene93087	PPI
MS.gene35563	MS.gene64310	PPI
MS.gene35563	MS.gene29459	PPI
MS.gene35563	MS.gene057293	PPI
MS.gene35563	MS.gene71207	PPI
MS.gene35563	MS.gene92775	PPI
MS.gene58860	MS.gene35563	PPI
MS.gene35563	MS.gene09934	PPI
MS.gene64327	MS.gene35563	PPI
MS.gene64307	MS.gene35563	PPI
MS.gene35563	MS.gene53662	PPI
MS.gene04917	MS.gene35563	PPI
MS.gene35563	MS.gene053319	PPI
MS.gene35563	MS.gene008225	PPI
MS.gene026530	MS.gene35563	PPI
MS.gene35563	MS.gene000724	PPI
MS.gene35563	MS.gene21696	PPI
MS.gene35563	MS.gene001246	PPI
MS.gene35563	MS.gene074045	PPI
MS.gene35563	MS.gene000738	PPI
MS.gene35563	MS.gene85596	PPI
MS.gene35563	MS.gene96922	PPI
MS.gene35563	MS.gene80013	PPI
MS.gene35563	MS.gene025797	PPI
MS.gene35563	MS.gene056383	PPI
MS.gene35563	MS.gene64314	PPI
MS.gene35563	MS.gene025777	PPI
MS.gene35563	MS.gene94551	PPI
MS.gene35563	MS.gene046988	PPI
MS.gene35563	MS.gene53650	PPI
MS.gene35563	MS.gene066863	PPI
MS.gene35563	MS.gene02545	PPI
MS.gene35563	MS.gene04915	PPI
MS.gene83068	MS.gene35563	PPI
MS.gene35563	MS.gene61009	PPI
MS.gene62689	MS.gene35563	PPI
MS.gene35563	MS.gene58906	PPI
MS.gene35563	MS.gene79028	PPI
MS.gene97948	MS.gene35563	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35563.t1	MTR_3g089090	96.403	139	5	0	1	139	1	139	1.81e-93	266
MS.gene35563.t1	MTR_3g089070	96.403	139	5	0	1	139	2	140	2.35e-93	266
MS.gene35563.t1	MTR_4g103630	73.723	137	36	0	3	139	4	140	9.35e-69	204
MS.gene35563.t1	MTR_4g103650	75.188	133	33	0	6	138	3	135	1.53e-67	201
MS.gene35563.t1	MTR_4g103655	73.529	136	36	0	3	138	4	139	1.99e-67	200
MS.gene35563.t1	MTR_6g023460	55.474	137	61	0	2	138	5	141	1.13e-51	160
MS.gene35563.t1	MTR_8g078270	48.148	135	69	1	5	138	53	187	4.97e-35	120
MS.gene35563.t1	MTR_3g067610	38.931	131	77	1	9	139	9	136	1.87e-28	102
MS.gene35563.t1	MTR_5g079340	40.152	132	75	2	9	138	8	137	1.09e-27	100
MS.gene35563.t1	MTR_7g075040	40.972	144	75	4	6	139	48	191	1.50e-27	101
MS.gene35563.t1	MTR_8g107110	37.313	134	84	0	6	139	25	158	1.95e-27	100
MS.gene35563.t1	MTR_1g032070	39.552	134	80	1	6	138	47	180	2.92e-27	100
MS.gene35563.t1	MTR_1g046950	39.098	133	78	1	9	138	8	140	3.21e-26	96.3
MS.gene35563.t1	MTR_8g105230	39.231	130	78	1	6	134	37	166	2.81e-25	95.1
MS.gene35563.t1	MTR_8g036075	38.462	143	79	3	6	139	50	192	5.79e-25	94.7
MS.gene35563.t1	MTR_1g047100	36.765	136	76	2	9	138	8	139	1.04e-23	89.7
MS.gene35563.t1	MTR_6g079570	36.567	134	84	1	6	138	27	160	1.68e-22	87.8
MS.gene35563.t1	MTR_4g067270	36.429	140	80	3	6	139	6	142	1.87e-22	87.0
MS.gene35563.t1	MTR_5g017510	36.090	133	84	1	7	138	50	182	2.02e-22	87.8
MS.gene35563.t1	MTR_5g017560	36.090	133	84	1	7	138	50	182	2.02e-22	87.8
MS.gene35563.t1	MTR_4g086260	34.615	130	84	1	9	138	61	189	8.54e-21	84.0
MS.gene35563.t1	MTR_5g017550	35.821	134	82	2	7	138	50	181	2.62e-20	82.4
MS.gene35563.t1	MTR_1g076650	33.813	139	81	2	6	138	13	146	4.45e-20	80.9
MS.gene35563.t1	MTR_7g087610	31.655	139	84	2	6	138	13	146	5.75e-20	80.5
MS.gene35563.t1	MTR_5g088320	30.935	139	85	2	6	138	13	146	1.13e-18	77.0
MS.gene35563.t1	MTR_6g025320	30.935	139	85	2	6	138	13	146	1.18e-18	77.0
MS.gene35563.t1	MTR_1g041285	33.858	127	83	1	13	138	20	146	1.58e-18	76.6
MS.gene35563.t1	MTR_7g089760	34.074	135	86	2	8	139	8	142	3.98e-18	75.9
MS.gene35563.t1	MTR_8g066630	32.836	134	78	2	9	134	21	150	2.35e-17	73.9
MS.gene35563.t1	MTR_1g071150	30.370	135	94	0	4	138	11	145	6.55e-17	72.4
MS.gene35563.t1	MTR_5g008705	32.283	127	85	1	13	138	2	128	7.21e-17	72.0
MS.gene35563.t1	MTR_7g090450	32.847	137	86	3	8	138	76	212	3.40e-16	72.0
MS.gene35563.t1	MTR_5g008695	35.135	111	69	1	30	137	2	112	3.66e-16	69.7
MS.gene35563.t1	MTR_3g083470	31.579	133	80	2	7	138	95	217	6.21e-16	71.6
MS.gene35563.t1	MTR_4g112460	32.331	133	87	2	9	138	15	147	9.83e-16	70.1
MS.gene35563.t1	MTR_7g074240	32.143	140	82	2	13	139	32	171	2.24e-14	66.6
MS.gene35563.t1	MTR_2g098890	33.333	138	87	2	7	139	66	203	3.29e-14	67.0
MS.gene35563.t1	MTR_5g009830	32.117	137	88	2	5	139	371	504	6.15e-14	67.8
MS.gene35563.t1	MTR_8g099095	31.387	137	89	2	5	139	371	504	8.96e-14	67.4
MS.gene35563.t1	MTR_4g115170	31.169	154	83	5	7	139	66	217	1.46e-13	65.5
MS.gene35563.t1	MTR_8g069915	29.323	133	91	2	9	138	16	148	2.26e-13	63.9
MS.gene35563.t1	MTR_0168s0120	33.019	106	58	3	41	138	10	110	3.21e-13	62.0
MS.gene35563.t1	MTR_6g025320	33.019	106	58	3	41	138	10	110	3.21e-13	62.0
MS.gene35563.t1	MTR_0028s0170	28.148	135	96	1	5	139	383	516	3.29e-13	65.9
MS.gene35563.t1	MTR_7g115040	31.343	134	91	1	6	138	13	146	6.10e-13	62.4
MS.gene35563.t1	MTR_5g089320	28.676	136	92	2	5	138	373	505	7.99e-13	64.7
MS.gene35563.t1	MTR_5g027000	28.030	132	94	1	9	139	26	157	8.03e-13	62.4
MS.gene35563.t1	MTR_7g068710	31.746	126	86	0	14	139	370	495	2.04e-12	63.5
MS.gene35563.t1	MTR_5g092810	29.927	137	91	2	5	139	397	530	4.23e-12	62.4
MS.gene35563.t1	MTR_6g007613	30.469	128	88	1	13	139	37	164	7.14e-12	60.1
MS.gene35563.t1	MTR_3g098090	30.147	136	91	2	5	139	337	469	8.69e-12	61.6
MS.gene35563.t1	MTR_3g098070	30.147	136	91	2	5	139	334	466	9.20e-12	61.6
MS.gene35563.t1	MTR_7g091890	30.714	140	89	2	4	139	362	497	1.11e-11	61.2
MS.gene35563.t1	MTR_1g052530	29.412	136	96	0	4	139	356	491	1.28e-11	61.2
MS.gene35563.t1	MTR_1g026190	27.007	137	95	2	5	139	387	520	1.28e-11	61.2
MS.gene35563.t1	MTR_1g054865	30.147	136	93	1	4	139	465	598	1.57e-11	60.8
MS.gene35563.t1	MTR_7g074020	29.688	128	89	1	13	139	38	165	3.20e-11	58.2
MS.gene35563.t1	MTR_3g051770	28.369	141	95	2	5	139	388	528	5.91e-11	59.3
MS.gene35563.t1	MTR_4g066660	30.435	138	89	3	5	139	377	510	6.65e-11	58.9
MS.gene35563.t1	MTR_4g132070	28.467	137	93	2	5	139	396	529	6.83e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35563.t1	AT1G76650	46.377	138	74	0	2	139	40	177	3.84e-37	125
MS.gene35563.t1	AT1G76650	46.377	138	74	0	2	139	40	177	3.84e-37	125
MS.gene35563.t1	AT1G76640	46.154	143	70	3	2	139	19	159	1.83e-34	117
MS.gene35563.t1	AT1G76650	44.928	138	66	1	2	139	40	167	5.42e-34	117
MS.gene35563.t1	AT3G50770	46.715	137	67	2	8	138	67	203	9.57e-34	117
MS.gene35563.t1	AT5G42380	43.609	133	73	1	9	139	53	185	2.67e-32	113
MS.gene35563.t1	AT1G24620	40.299	134	79	1	6	138	38	171	2.03e-27	100
MS.gene35563.t1	AT3G01830	40.146	137	77	2	6	139	12	146	1.44e-26	97.4
MS.gene35563.t1	AT1G66400	33.824	136	87	1	6	138	16	151	3.86e-25	94.0
MS.gene35563.t1	AT5G37770	35.971	139	84	1	6	139	18	156	4.19e-25	94.0
MS.gene35563.t1	AT5G37770	35.971	139	84	1	6	139	18	156	4.19e-25	94.0
MS.gene35563.t1	AT1G18210	36.842	133	81	1	6	138	24	153	5.00e-24	91.7
MS.gene35563.t1	AT1G18210	36.842	133	81	1	6	138	24	153	5.00e-24	91.7
MS.gene35563.t1	AT1G73630	33.588	131	84	1	9	139	24	151	1.97e-22	87.4
MS.gene35563.t1	AT3G07490	35.915	142	88	2	1	139	1	142	5.58e-21	83.2
MS.gene35563.t1	AT1G05990	36.232	138	84	2	6	139	6	143	3.17e-20	81.3
MS.gene35563.t1	AT2G15680	34.328	134	85	2	7	139	52	183	7.34e-20	81.3
MS.gene35563.t1	AT3G59440	34.815	135	86	1	7	139	53	187	8.22e-20	81.3
MS.gene35563.t1	AT4G03290	34.483	145	89	2	1	139	1	145	2.12e-19	79.3
MS.gene35563.t1	AT3G22930	32.836	134	89	1	6	138	36	169	2.47e-19	79.7
MS.gene35563.t1	AT2G43290	33.566	143	85	3	6	139	66	207	2.87e-19	80.5
MS.gene35563.t1	AT5G17470	32.090	134	88	1	9	139	6	139	4.71e-19	78.2
MS.gene35563.t1	AT5G21274	31.655	139	84	2	6	138	13	146	5.45e-19	78.2
MS.gene35563.t1	AT3G56800	31.655	139	84	2	6	138	13	146	5.69e-19	77.8
MS.gene35563.t1	AT2G27030	31.655	139	84	2	6	138	13	146	5.69e-19	77.8
MS.gene35563.t1	AT2G41110	31.655	139	84	2	6	138	13	146	5.69e-19	77.8
MS.gene35563.t1	AT5G37780	30.935	139	85	2	6	138	13	146	6.69e-19	77.8
MS.gene35563.t1	AT1G66410	30.935	139	85	2	6	138	13	146	6.69e-19	77.8
MS.gene35563.t1	AT3G43810	30.935	139	85	2	6	138	13	146	1.23e-18	77.0
MS.gene35563.t1	AT2G27030	31.655	139	84	2	6	138	13	146	1.27e-18	77.8
MS.gene35563.t1	AT4G12860	34.815	135	85	2	8	139	8	142	3.22e-18	76.3
MS.gene35563.t1	AT4G14640	32.090	134	90	1	6	138	14	147	3.78e-18	75.9
MS.gene35563.t1	AT3G43810	30.935	139	85	2	6	138	13	146	6.22e-18	76.6
MS.gene35563.t1	AT3G10190	33.083	133	87	2	8	138	73	205	6.26e-18	76.6
MS.gene35563.t1	AT2G41100	28.477	151	90	2	6	138	67	217	1.61e-16	74.3
MS.gene35563.t1	AT2G41100	28.477	151	90	2	6	138	67	217	1.61e-16	74.3
MS.gene35563.t1	AT2G41100	28.477	151	90	2	6	138	67	217	1.61e-16	74.3
MS.gene35563.t1	AT3G50360	33.594	128	84	1	13	139	35	162	2.07e-16	72.0
MS.gene35563.t1	AT2G41110	29.801	151	83	3	6	138	13	158	2.44e-16	71.6
MS.gene35563.t1	AT2G41100	28.477	151	90	2	6	138	102	252	2.45e-16	73.9
MS.gene35563.t1	AT2G41100	26.000	150	94	2	6	138	13	162	3.98e-13	65.1
MS.gene35563.t1	AT2G41100	28.477	151	90	2	6	138	102	252	2.45e-16	73.9
MS.gene35563.t1	AT2G41100	26.000	150	94	2	6	138	13	162	3.98e-13	65.1
MS.gene35563.t1	AT2G36180	29.630	135	91	2	9	139	4	138	4.26e-16	70.5
MS.gene35563.t1	AT3G03400	30.657	137	86	4	1	131	1	134	7.44e-16	69.7
MS.gene35563.t1	AT5G37780	27.922	154	85	3	6	138	13	161	7.87e-15	67.8
MS.gene35563.t1	AT1G18530	30.827	133	89	1	9	138	11	143	1.11e-14	67.0
MS.gene35563.t1	AT4G23650	33.577	137	86	2	5	139	383	516	2.44e-14	68.9
MS.gene35563.t1	AT5G12180	31.111	135	92	1	5	139	378	511	4.56e-14	68.2
MS.gene35563.t1	AT5G37780	29.365	126	78	2	19	138	13	133	5.94e-14	64.7
MS.gene35563.t1	AT4G14640	30.579	121	83	1	19	138	9	129	6.96e-14	64.3
MS.gene35563.t1	AT5G19360	30.370	135	93	1	5	139	373	506	7.11e-14	67.8
MS.gene35563.t1	AT1G66410	29.365	126	78	2	19	138	36	156	8.24e-14	64.7
MS.gene35563.t1	AT5G37780	29.365	126	78	2	19	138	52	172	1.28e-13	64.7
MS.gene35563.t1	AT3G51850	33.333	126	84	0	14	139	368	493	1.59e-13	66.6
MS.gene35563.t1	AT1G66410	33.019	106	58	3	41	138	10	110	2.13e-13	62.8
MS.gene35563.t1	AT1G66410	33.019	106	58	3	41	138	10	110	2.13e-13	62.8
MS.gene35563.t1	AT1G32250	29.927	137	81	2	9	134	20	152	2.52e-13	63.5
MS.gene35563.t1	AT3G43810	33.019	106	58	3	41	138	10	110	3.37e-13	62.0
MS.gene35563.t1	AT3G43810	33.019	106	58	3	41	138	10	110	3.37e-13	62.0
MS.gene35563.t1	AT1G76040	29.927	137	91	2	5	139	416	549	8.80e-13	64.7
MS.gene35563.t1	AT1G76040	29.927	137	91	2	5	139	178	311	9.11e-13	64.3
MS.gene35563.t1	AT1G76040	29.927	137	91	2	5	139	178	311	9.11e-13	64.3
MS.gene35563.t1	AT2G41090	27.068	133	95	1	6	138	13	143	1.74e-12	62.0
MS.gene35563.t1	AT3G51920	27.612	134	96	1	6	138	13	146	2.34e-12	60.8
MS.gene35563.t1	AT4G37010	27.273	132	95	1	9	139	31	162	2.71e-12	60.8
MS.gene35563.t1	AT4G37010	27.273	132	95	1	9	139	35	166	2.99e-12	60.8
MS.gene35563.t1	AT3G03000	29.851	134	92	1	4	135	19	152	9.81e-12	59.3
MS.gene35563.t1	AT3G10660	31.655	139	87	4	4	139	490	623	1.13e-11	61.2
MS.gene35563.t1	AT3G10660	31.655	139	87	4	4	139	490	623	1.13e-11	61.2
MS.gene35563.t1	AT5G12480	29.197	137	96	1	4	139	363	499	1.31e-11	61.2
MS.gene35563.t1	AT5G12480	29.197	137	96	1	4	139	269	405	1.38e-11	61.2
MS.gene35563.t1	AT1G50700	27.737	137	94	2	5	139	378	511	2.98e-11	60.1
MS.gene35563.t1	AT1G74740	32.308	130	80	3	14	139	373	498	3.27e-11	60.1
MS.gene35563.t1	AT4G04695	28.148	135	96	1	5	139	336	469	3.30e-11	60.1
MS.gene35563.t1	AT4G09570	29.412	136	92	2	5	139	330	462	3.56e-11	60.1
MS.gene35563.t1	AT1G35670	29.412	136	92	2	5	139	331	463	3.83e-11	59.7
MS.gene35563.t1	AT2G41410	28.889	135	92	3	8	138	73	207	5.02e-11	58.5
MS.gene35563.t1	AT3G20410	27.737	137	94	2	5	139	396	529	6.56e-11	59.3
MS.gene35563.t1	AT3G20410	27.737	137	94	2	5	139	396	529	6.56e-11	59.3
MS.gene35563.t1	AT4G21940	29.197	137	92	2	5	139	406	539	7.34e-11	58.9
MS.gene35563.t1	AT4G21940	29.197	137	92	2	5	139	406	539	7.91e-11	58.9
MS.gene35563.t1	AT2G31500	31.655	139	92	2	4	139	370	508	7.98e-11	58.9
MS.gene35563.t1	AT3G25600	28.571	133	92	2	9	138	16	148	9.37e-11	57.0
MS.gene35563.t1	AT2G41100	30.556	108	57	2	49	138	20	127	9.72e-11	57.4

Find 27 sgRNAs with CRISPR-Local

Find 32 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGCATCCTCTTCAAACTCTT+TGG	0.279285	3.3:+64627927	None:intergenic
GGAGGAATTAATTGCTTTGA+TGG	0.320451	3.3:-64628033	MS.gene35563:CDS
TTTGTTGAAAGAAGCTGAAA+TGG	0.376240	3.3:-64628099	MS.gene35563:CDS
TGGTGATGGATATTTGAGTT+TGG	0.381496	3.3:-64628054	MS.gene35563:CDS
GAAGAGGATGCTTAAGAAGA+TGG	0.388089	3.3:-64627916	MS.gene35563:CDS
AGACAAAGGCTGGGAGTAAT+GGG	0.401953	3.3:-64628131	MS.gene35563:CDS
AGCAGAGCTAAGACAAAGGC+TGG	0.419562	3.3:-64628141	MS.gene35563:CDS
AGCCTTTGTCTTAGCTCTGC+TGG	0.442742	3.3:+64628143	None:intergenic
TTAATTGCTTTGATGGAGGA+AGG	0.458662	3.3:-64628026	MS.gene35563:CDS
AAGACAAAGGCTGGGAGTAA+TGG	0.460108	3.3:-64628132	MS.gene35563:CDS
AGAAGCTGAAATGGCTATTG+AGG	0.481748	3.3:-64628090	MS.gene35563:CDS
AAGAGGATGCTTAAGAAGAT+GGG	0.484014	3.3:-64627915	MS.gene35563:CDS
TGGAGAGGAACAAAAGTTGA+AGG	0.498848	3.3:-64628003	MS.gene35563:CDS
ATTGCTTTGATGGAGGAAGG+TGG	0.541567	3.3:-64628023	MS.gene35563:CDS
TGATGGATATTTGAGTTTGG+AGG	0.566788	3.3:-64628051	MS.gene35563:CDS
GGAATTAATTGCTTTGATGG+AGG	0.567051	3.3:-64628030	MS.gene35563:CDS
TGAAATGGCTATTGAGGCAA+TGG	0.572267	3.3:-64628084	MS.gene35563:CDS
TGATGAAGATGGTGATGGAA+AGG	0.579290	3.3:-64628171	MS.gene35563:CDS
CGCCAGCAGAGCTAAGACAA+AGG	0.590458	3.3:-64628145	MS.gene35563:CDS
TAACACCAAAGAGTTTGAAG+AGG	0.591633	3.3:-64627932	MS.gene35563:CDS
GCAGAGCTAAGACAAAGGCT+GGG	0.620645	3.3:-64628140	MS.gene35563:CDS
TTTGATGGAGGAAGGTGGAG+AGG	0.629126	3.3:-64628018	MS.gene35563:CDS
ATTGAGGCAATGGATTCAGA+TGG	0.638749	3.3:-64628074	MS.gene35563:CDS
ATGTATGATAGTGAGAAGTG+TGG	0.644233	3.3:-64627960	MS.gene35563:CDS
GCAATGGATTCAGATGGTGA+TGG	0.644671	3.3:-64628068	MS.gene35563:CDS
TTATAAAAGATGAAGAACGC+GGG	0.655567	3.3:-64628218	None:intergenic
ATTATAAAAGATGAAGAACG+CGG	0.665781	3.3:-64628219	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TATGATTAAACATTTTGATT+TGG	-	chr3.3:64628159-64628178	MS.gene35563:CDS	15.0%
!!!	ATTAAACATTTTGATTTGGA+TGG	-	chr3.3:64628163-64628182	MS.gene35563:CDS	20.0%
!!!	TTAAACATTTTGATTTGGAT+GGG	-	chr3.3:64628164-64628183	MS.gene35563:CDS	20.0%
!!!	CTTAGATATTTTGATGAAGA+TGG	-	chr3.3:64627839-64627858	MS.gene35563:CDS	25.0%
!!!	TAAACATTTTGATTTGGATG+GGG	-	chr3.3:64628165-64628184	MS.gene35563:CDS	25.0%
	TTTGTTGAAAGAAGCTGAAA+TGG	-	chr3.3:64627922-64627941	MS.gene35563:CDS	30.0%
!!!	TATTTTGATGAAGATGGTGA+TGG	-	chr3.3:64627845-64627864	MS.gene35563:CDS	30.0%
	AAGAGGATGCTTAAGAAGAT+GGG	-	chr3.3:64628106-64628125	MS.gene35563:CDS	35.0%
	GGAATTAATTGCTTTGATGG+AGG	-	chr3.3:64627991-64628010	MS.gene35563:CDS	35.0%
	GGAGGAATTAATTGCTTTGA+TGG	-	chr3.3:64627988-64628007	MS.gene35563:CDS	35.0%
	TAACACCAAAGAGTTTGAAG+AGG	-	chr3.3:64628089-64628108	MS.gene35563:CDS	35.0%
	TTAATTGCTTTGATGGAGGA+AGG	-	chr3.3:64627995-64628014	MS.gene35563:CDS	35.0%
!	ATGTATGATAGTGAGAAGTG+TGG	-	chr3.3:64628061-64628080	MS.gene35563:CDS	35.0%
!	TGATGGATATTTGAGTTTGG+AGG	-	chr3.3:64627970-64627989	MS.gene35563:CDS	35.0%
!!	TGGTGATGGATATTTGAGTT+TGG	-	chr3.3:64627967-64627986	MS.gene35563:CDS	35.0%
	AGAAGCTGAAATGGCTATTG+AGG	-	chr3.3:64627931-64627950	MS.gene35563:CDS	40.0%
	AGCATCCTCTTCAAACTCTT+TGG	+	chr3.3:64628097-64628116	None:intergenic	40.0%
	GAAGAGGATGCTTAAGAAGA+TGG	-	chr3.3:64628105-64628124	MS.gene35563:CDS	40.0%
	TGAAATGGCTATTGAGGCAA+TGG	-	chr3.3:64627937-64627956	MS.gene35563:CDS	40.0%
	TGGAGAGGAACAAAAGTTGA+AGG	-	chr3.3:64628018-64628037	MS.gene35563:CDS	40.0%
!	ATTGAGGCAATGGATTCAGA+TGG	-	chr3.3:64627947-64627966	MS.gene35563:CDS	40.0%
!!	TGATGAAGATGGTGATGGAA+AGG	-	chr3.3:64627850-64627869	MS.gene35563:CDS	40.0%
!!!	CATTTTGATTTGGATGGGGA+TGG	-	chr3.3:64628169-64628188	MS.gene35563:CDS	40.0%
	AAGACAAAGGCTGGGAGTAA+TGG	-	chr3.3:64627889-64627908	MS.gene35563:CDS	45.0%
	AGACAAAGGCTGGGAGTAAT+GGG	-	chr3.3:64627890-64627909	MS.gene35563:CDS	45.0%
	ATTGCTTTGATGGAGGAAGG+TGG	-	chr3.3:64627998-64628017	MS.gene35563:CDS	45.0%
!	GCAATGGATTCAGATGGTGA+TGG	-	chr3.3:64627953-64627972	MS.gene35563:CDS	45.0%
	AGCAGAGCTAAGACAAAGGC+TGG	-	chr3.3:64627880-64627899	MS.gene35563:CDS	50.0%
	GCAGAGCTAAGACAAAGGCT+GGG	-	chr3.3:64627881-64627900	MS.gene35563:CDS	50.0%
	TTTGATGGAGGAAGGTGGAG+AGG	-	chr3.3:64628003-64628022	MS.gene35563:CDS	50.0%
!!	AGCCTTTGTCTTAGCTCTGC+TGG	+	chr3.3:64627881-64627900	None:intergenic	50.0%
	CGCCAGCAGAGCTAAGACAA+AGG	-	chr3.3:64627876-64627895	MS.gene35563:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.3	gene	64627812	64628231	64627812	ID=MS.gene35563
chr3.3	mRNA	64627812	64628231	64627812	ID=MS.gene35563.t1;Parent=MS.gene35563
chr3.3	exon	64627812	64628231	64627812	ID=MS.gene35563.t1.exon1;Parent=MS.gene35563.t1
chr3.3	CDS	64627812	64628231	64627812	ID=cds.MS.gene35563.t1;Parent=MS.gene35563.t1

Gene Sequence

>MS.gene35563

ATGAAGAACGCGGGATTCGAGCATGTTCTTAGATATTTTGATGAAGATGGTGATGGAAAGGTTTCGCCAGCAGAGCTAAGACAAAGGCTGGGAGTAATGGGAGAAGAGATTTTGTTGAAAGAAGCTGAAATGGCTATTGAGGCAATGGATTCAGATGGTGATGGATATTTGAGTTTGGAGGAATTAATTGCTTTGATGGAGGAAGGTGGAGAGGAACAAAAGTTGAAGGATTTGAGAGATGCATTTGAGATGTATGATAGTGAGAAGTGTGGATTTATAACACCAAAGAGTTTGAAGAGGATGCTTAAGAAGATGGGTGAGTCTAAGTCTATTGATGAATGTAAAGCTATGATTAAACATTTTGATTTGGATGGGGATGGTTTGCTTAGCTTTGATGAATTCACAGTAATGATGCAGTGA

Protein sequence

>MS.gene35563.t1

MKNAGFEHVLRYFDEDGDGKVSPAELRQRLGVMGEEILLKEAEMAIEAMDSDGDGYLSLEELIALMEEGGEEQKLKDLRDAFEMYDSEKCGFITPKSLKRMLKKMGESKSIDECKAMIKHFDLDGDGLLSFDEFTVMMQ