AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene49270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49270.t1 MTR_4g103650 91.729 133 11 0 5 137 1 133 5.73e-80 234
MS.gene49270.t1 MTR_4g103655 95.276 127 6 0 1 127 1 127 8.42e-80 234
MS.gene49270.t1 MTR_4g103630 93.701 127 8 0 1 127 1 127 1.83e-79 233
MS.gene49270.t1 MTR_3g089070 74.803 127 32 0 1 127 1 127 1.63e-61 187
MS.gene49270.t1 MTR_3g089090 77.686 121 27 0 7 127 6 126 2.14e-61 187
MS.gene49270.t1 MTR_6g023460 55.906 127 56 0 1 127 3 129 4.95e-46 148
MS.gene49270.t1 MTR_8g078270 52.941 119 51 2 10 125 57 173 2.47e-31 112
MS.gene49270.t1 MTR_8g107110 34.507 142 93 0 6 147 24 165 7.73e-23 90.1
MS.gene49270.t1 MTR_3g067610 37.405 131 79 1 6 136 5 132 4.51e-22 87.4
MS.gene49270.t1 MTR_8g105230 40.650 123 72 1 6 127 36 158 1.34e-21 87.4
MS.gene49270.t1 MTR_4g067270 40.000 125 72 2 6 127 5 129 4.42e-21 85.1
MS.gene49270.t1 MTR_5g079340 35.115 131 85 0 6 136 4 134 2.69e-20 82.8
MS.gene49270.t1 MTR_7g075040 34.641 153 90 3 1 143 42 194 1.01e-18 80.1
MS.gene49270.t1 MTR_1g032070 38.211 123 75 1 6 127 46 168 6.50e-18 78.2
MS.gene49270.t1 MTR_7g087610 35.433 127 73 2 6 127 12 134 9.80e-18 76.3
MS.gene49270.t1 MTR_4g086260 35.246 122 78 1 6 127 57 177 1.11e-17 77.4
MS.gene49270.t1 MTR_1g046950 33.333 129 75 2 6 127 4 128 1.94e-17 75.5
MS.gene49270.t1 MTR_6g025320 35.433 127 73 2 6 127 12 134 3.41e-17 75.1
MS.gene49270.t1 MTR_5g088320 35.433 127 73 2 6 127 12 134 3.56e-17 75.1
MS.gene49270.t1 MTR_6g079570 34.848 132 85 1 6 136 26 157 7.08e-17 74.7
MS.gene49270.t1 MTR_1g047100 30.827 133 90 1 6 136 4 136 1.49e-16 73.2
MS.gene49270.t1 MTR_1g076650 33.594 128 76 2 5 127 11 134 3.07e-16 72.4
MS.gene49270.t1 MTR_7g089760 35.200 125 78 2 6 127 5 129 5.10e-15 69.3
MS.gene49270.t1 MTR_5g017510 33.333 123 81 1 6 127 48 170 6.07e-15 70.1
MS.gene49270.t1 MTR_5g017560 33.333 123 81 1 6 127 48 170 6.07e-15 70.1
MS.gene49270.t1 MTR_8g036075 34.351 131 77 3 6 127 49 179 4.39e-14 67.8
MS.gene49270.t1 MTR_1g041285 32.258 124 83 1 5 127 11 134 4.60e-14 66.6
MS.gene49270.t1 MTR_8g066630 31.783 129 78 2 6 127 17 142 6.53e-14 66.6
MS.gene49270.t1 MTR_3g083470 35.200 125 70 3 4 127 91 205 7.86e-14 67.8
MS.gene49270.t1 MTR_1g071150 30.328 122 85 0 6 127 12 133 1.10e-13 65.9
MS.gene49270.t1 MTR_5g017550 32.258 124 80 2 6 127 48 169 2.95e-13 65.5
MS.gene49270.t1 MTR_2g098890 37.008 127 75 2 6 127 64 190 6.76e-13 65.1
MS.gene49270.t1 MTR_7g074240 32.576 132 76 2 9 127 27 158 1.29e-12 63.5
MS.gene49270.t1 MTR_7g090450 31.343 134 78 4 4 127 71 200 1.31e-12 64.3
MS.gene49270.t1 MTR_4g115170 31.333 150 84 3 6 136 64 213 1.35e-12 64.3
MS.gene49270.t1 MTR_6g007613 29.134 127 89 1 2 127 25 151 2.40e-12 62.8
MS.gene49270.t1 MTR_6g007613 27.612 134 92 2 2 134 25 154 2.82e-12 62.0
MS.gene49270.t1 MTR_7g074020 28.261 138 94 2 2 138 26 159 6.41e-12 61.2
MS.gene49270.t1 MTR_7g074020 29.134 127 89 1 2 127 26 152 2.80e-11 59.7
MS.gene49270.t1 MTR_5g009830 34.483 116 71 2 14 127 379 491 3.51e-11 61.6
MS.gene49270.t1 MTR_5g008705 29.134 127 83 2 14 136 2 125 4.98e-11 58.2
MS.gene49270.t1 MTR_8g099095 33.621 116 72 2 14 127 379 491 8.58e-11 60.5
MS.gene49270.t1 MTR_5g027000 28.859 149 98 3 1 141 10 158 8.69e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49270.t1 AT1G76650 44.262 122 68 0 6 127 43 164 3.23e-28 104
MS.gene49270.t1 AT1G76650 44.262 122 68 0 6 127 43 164 3.23e-28 104
MS.gene49270.t1 AT5G42380 44.355 124 67 1 6 127 49 172 3.98e-27 101
MS.gene49270.t1 AT3G50770 43.750 128 66 2 6 127 64 191 1.33e-26 100
MS.gene49270.t1 AT1G76650 42.623 122 60 1 6 127 43 154 2.15e-24 94.4
MS.gene49270.t1 AT1G76640 40.800 125 71 1 6 127 22 146 4.01e-24 93.2
MS.gene49270.t1 AT1G24620 40.602 133 78 1 6 137 37 169 1.45e-23 92.8
MS.gene49270.t1 AT3G01830 42.063 126 66 4 6 127 11 133 1.98e-19 80.9
MS.gene49270.t1 AT1G18210 35.433 127 79 1 1 127 18 141 2.74e-19 81.3
MS.gene49270.t1 AT1G18210 35.433 127 79 1 1 127 18 141 2.74e-19 81.3
MS.gene49270.t1 AT5G37770 33.088 136 86 1 6 136 17 152 3.78e-19 80.5
MS.gene49270.t1 AT5G37770 33.088 136 86 1 6 136 17 152 3.78e-19 80.5
MS.gene49270.t1 AT1G73630 33.871 124 79 1 4 127 18 138 3.92e-19 80.5
MS.gene49270.t1 AT4G03290 39.062 128 72 2 6 127 5 132 4.41e-19 80.1
MS.gene49270.t1 AT1G05990 38.889 126 73 2 6 127 5 130 5.17e-18 77.0
MS.gene49270.t1 AT3G59440 35.200 125 79 1 5 127 50 174 6.28e-18 78.2
MS.gene49270.t1 AT3G56800 36.220 127 72 2 6 127 12 134 1.57e-17 75.9
MS.gene49270.t1 AT2G27030 36.220 127 72 2 6 127 12 134 1.57e-17 75.9
MS.gene49270.t1 AT2G41110 36.220 127 72 2 6 127 12 134 1.57e-17 75.9
MS.gene49270.t1 AT2G27030 36.220 127 72 2 6 127 12 134 1.70e-17 76.6
MS.gene49270.t1 AT1G66400 29.851 134 91 1 6 136 15 148 1.75e-17 75.9
MS.gene49270.t1 AT5G21274 36.220 127 72 2 6 127 12 134 1.78e-17 75.9
MS.gene49270.t1 AT5G37780 35.433 127 73 2 6 127 12 134 2.83e-17 75.1
MS.gene49270.t1 AT1G66410 35.433 127 73 2 6 127 12 134 2.83e-17 75.1
MS.gene49270.t1 AT3G43810 35.433 127 73 2 6 127 12 134 3.49e-17 76.6
MS.gene49270.t1 AT3G43810 35.433 127 73 2 6 127 12 134 3.58e-17 75.1
MS.gene49270.t1 AT2G43290 34.351 131 76 3 6 127 65 194 3.98e-17 76.3
MS.gene49270.t1 AT2G15680 36.585 123 75 2 6 127 50 170 3.39e-16 73.2
MS.gene49270.t1 AT3G22930 33.871 124 81 1 5 127 34 157 3.58e-16 72.8
MS.gene49270.t1 AT4G14640 34.646 127 74 2 6 127 13 135 4.02e-15 69.7
MS.gene49270.t1 AT2G41110 33.094 139 72 3 6 127 12 146 4.73e-15 69.7
MS.gene49270.t1 AT4G12860 34.328 134 85 2 6 136 5 138 6.53e-15 68.9
MS.gene49270.t1 AT3G07490 33.099 142 92 2 4 142 3 144 1.36e-14 68.2
MS.gene49270.t1 AT3G50360 30.709 127 87 1 2 127 23 149 1.23e-13 66.2
MS.gene49270.t1 AT3G10190 30.400 125 85 2 5 127 69 193 2.17e-13 66.2
MS.gene49270.t1 AT2G41100 27.857 140 83 1 6 127 66 205 2.45e-13 67.0
MS.gene49270.t1 AT2G41100 27.857 140 83 1 6 127 66 205 2.45e-13 67.0
MS.gene49270.t1 AT2G41100 27.857 140 83 1 6 127 66 205 2.45e-13 67.0
MS.gene49270.t1 AT5G37780 31.690 142 73 3 6 127 12 149 2.46e-13 65.1
MS.gene49270.t1 AT2G41100 27.857 140 83 1 6 127 101 240 3.14e-13 67.0
MS.gene49270.t1 AT2G41100 26.207 145 90 1 6 133 12 156 9.77e-12 62.8
MS.gene49270.t1 AT2G41100 27.857 140 83 1 6 127 101 240 3.14e-13 67.0
MS.gene49270.t1 AT2G41100 26.207 145 90 1 6 133 12 156 9.77e-12 62.8
MS.gene49270.t1 AT5G17470 32.258 124 77 2 7 127 7 126 4.06e-13 64.3
MS.gene49270.t1 AT2G36180 28.873 142 97 2 9 146 3 144 3.29e-12 61.6
MS.gene49270.t1 AT3G03400 32.558 129 78 4 5 127 4 129 5.20e-12 61.2
MS.gene49270.t1 AT5G37780 29.412 153 73 3 6 127 12 160 9.25e-12 61.2
MS.gene49270.t1 AT3G01830 41.509 106 55 4 6 107 11 113 2.30e-11 59.3
MS.gene49270.t1 AT5G37780 32.743 113 67 2 20 127 13 121 3.27e-11 58.9
MS.gene49270.t1 AT4G23650 33.621 116 72 2 14 127 391 503 3.31e-11 61.6
MS.gene49270.t1 AT1G66410 32.743 113 67 2 20 127 36 144 4.22e-11 58.9

Find 45 sgRNAs with CRISPR-Local

Find 67 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGGAAATTTCCTCGGTATT+TGG 0.217496 8.2:-20646806 None:intergenic
GGAGGATTTAATAACGCTTA+TGG 0.268235 8.2:+20646212 MS.gene49270:CDS
AACATCCTCTTCAAACTCTT+TGG 0.271094 8.2:-20646318 None:intergenic
ATTCGACTCCTTAACTCTTT+AGG 0.306625 8.2:-20646102 None:intergenic
TTAATAACGCTTATGGAATC+AGG 0.307829 8.2:+20646219 MS.gene49270:CDS
CGGTGATGGGTTATTGAGTT+TGG 0.353262 8.2:+20646191 MS.gene49270:CDS
GATGATTAAAAGATTTGATT+TGG 0.354816 8.2:+20646383 MS.gene49270:CDS
CTTAGTTACTTTGATGAAGA+TGG 0.389765 8.2:+20646063 MS.gene49270:CDS
CATCAACTTGCATTCTTCAA+TGG 0.390022 8.2:-20646364 None:intergenic
TGAAATTGCTATTGAGGCAT+TGG 0.422915 8.2:+20646161 MS.gene49270:CDS
AGTTAACATGAGGAGGGAAA+TGG 0.427226 8.2:+20646026 None:intergenic
AGGAGTCGAATGGCGAAGAT+TGG 0.437882 8.2:+20646114 MS.gene49270:CDS
ATTAAAAGATTTGATTTGGA+TGG 0.441527 8.2:+20646387 MS.gene49270:CDS
AGAAGTTGAAATTGCTATTG+AGG 0.442114 8.2:+20646155 MS.gene49270:CDS
TTCCGAGGCACAAAATTCCT+TGG 0.443978 8.2:+20646709 MS.gene49270:CDS
AAATTTCGCCTAAAGAGTTA+AGG 0.454690 8.2:+20646094 MS.gene49270:CDS
TGATGGGTTATTGAGTTTGG+AGG 0.497472 8.2:+20646194 MS.gene49270:CDS
CATTGGATTCTGACGGTGAT+GGG 0.509818 8.2:+20646178 MS.gene49270:CDS
AGTCGAATGGCGAAGATTGG+CGG 0.513078 8.2:+20646117 MS.gene49270:CDS
TTTCCGAGGAACTCATGGCC+TGG 0.514663 8.2:+20646764 MS.gene49270:CDS
GCATTGGATTCTGACGGTGA+TGG 0.527640 8.2:+20646177 MS.gene49270:CDS
TTTGAAATGTATGATAATGA+AGG 0.534288 8.2:+20646279 MS.gene49270:CDS
TTTCCAGGCCATGAGTTCCT+CGG 0.537009 8.2:-20646767 None:intergenic
TAATAACGCTTATGGAATCA+GGG 0.546825 8.2:+20646220 MS.gene49270:CDS
CCTCGGAAACAAAAGTTCCT+CGG 0.552400 8.2:-20646825 None:intergenic
ATGTATGATAATGAAGGATG+TGG 0.553294 8.2:+20646285 MS.gene49270:CDS
AATAACGCTTATGGAATCAG+GGG 0.562213 8.2:+20646221 MS.gene49270:CDS
AGATTTGATTTGGATGGAGA+TGG 0.567437 8.2:+20646393 MS.gene49270:CDS
TCCTCGGAATTAAGATGTGA+TGG 0.571912 8.2:+20646855 MS.gene49270:CDS
ATTCCGAGGACATGTTTCCT+CGG 0.573022 8.2:-20646842 None:intergenic
TTTCCGAGGAAACATGTCCT+CGG 0.574902 8.2:+20646839 MS.gene49270:CDS
TACTTTGATGAAGATGGAGA+CGG 0.575513 8.2:+20646069 MS.gene49270:CDS
AAGTTCCTCGGAAATTTCCT+CGG 0.576371 8.2:-20646813 None:intergenic
ACTACATAGTTAACATGAGG+AGG 0.590908 8.2:+20646019 None:intergenic
GGAGATTTAGACGACTTCCA+AGG 0.591608 8.2:-20646726 None:intergenic
GCCATCACATCTTAATTCCG+AGG 0.605552 8.2:-20646856 None:intergenic
TAACACCAAAGAGTTTGAAG+AGG 0.608054 8.2:+20646313 MS.gene49270:CDS
GGAAGTCGTCTAAATCTCCT+CGG 0.609116 8.2:+20646730 MS.gene49270:CDS
TAAAGAGTTAAGGAGTCGAA+TGG 0.634705 8.2:+20646104 MS.gene49270:CDS
ATTGAGGCATTGGATTCTGA+CGG 0.649427 8.2:+20646171 MS.gene49270:CDS
AAGAAAGCACTGAAATTCCG+AGG 0.653285 8.2:+20646694 MS.gene49270:intron
CTACATAGTTAACATGAGGA+GGG 0.655064 8.2:+20646020 None:intergenic
ATAACGCTTATGGAATCAGG+GGG 0.673170 8.2:+20646222 MS.gene49270:CDS
AAATACCGAGGAAATTTCCG+AGG 0.689893 8.2:+20646808 MS.gene49270:CDS
TGGTTGCAATCCAAATACCG+AGG 0.695447 8.2:+20646796 MS.gene49270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTCATATAAATCTTGTTT+TGG + chr8.2:20646580-20646599 MS.gene49270:intron 15.0%
!! GATGATTAAAAGATTTGATT+TGG + chr8.2:20646383-20646402 MS.gene49270:CDS 20.0%
!!! ATTAAAAGATTTGATTTGGA+TGG + chr8.2:20646387-20646406 MS.gene49270:CDS 20.0%
!!! TTAATAACAATTTGAGATTG+AGG + chr8.2:20646617-20646636 MS.gene49270:intron 20.0%
!!! TTTGAAATGTATGATAATGA+AGG + chr8.2:20646279-20646298 MS.gene49270:CDS 20.0%
AAATTTCGCCTAAAGAGTTA+AGG + chr8.2:20646094-20646113 MS.gene49270:CDS 30.0%
AAGAGGATGTTGAAAAAGTT+GGG + chr8.2:20646330-20646349 MS.gene49270:CDS 30.0%
TAATAACGCTTATGGAATCA+GGG + chr8.2:20646220-20646239 MS.gene49270:CDS 30.0%
TGAAGAGTTCAGAATTATGA+TGG + chr8.2:20646428-20646447 MS.gene49270:intron 30.0%
TGATGTGTTTATATGCTTTC+TGG + chr8.2:20646479-20646498 MS.gene49270:intron 30.0%
TTAATAACGCTTATGGAATC+AGG + chr8.2:20646219-20646238 MS.gene49270:CDS 30.0%
! AACAATTTGAGATTGAGGTA+TGG + chr8.2:20646622-20646641 MS.gene49270:intron 30.0%
! ACAATTTGAGATTGAGGTAT+GGG + chr8.2:20646623-20646642 MS.gene49270:intron 30.0%
! AGAAGTTGAAATTGCTATTG+AGG + chr8.2:20646155-20646174 MS.gene49270:CDS 30.0%
! ATGTATGATAATGAAGGATG+TGG + chr8.2:20646285-20646304 MS.gene49270:CDS 30.0%
! CTTAGTTACTTTGATGAAGA+TGG + chr8.2:20646063-20646082 MS.gene49270:CDS 30.0%
! TTGCAACCAAATATTTTTCC+AGG - chr8.2:20646785-20646804 None:intergenic 30.0%
AACATCCTCTTCAAACTCTT+TGG - chr8.2:20646321-20646340 None:intergenic 35.0%
AATAACGCTTATGGAATCAG+GGG + chr8.2:20646221-20646240 MS.gene49270:CDS 35.0%
ATTCGACTCCTTAACTCTTT+AGG - chr8.2:20646105-20646124 None:intergenic 35.0%
CATCAACTTGCATTCTTCAA+TGG - chr8.2:20646367-20646386 None:intergenic 35.0%
GAAGAGGATGTTGAAAAAGT+TGG + chr8.2:20646329-20646348 MS.gene49270:CDS 35.0%
GGAGGATTTAATAACGCTTA+TGG + chr8.2:20646212-20646231 MS.gene49270:CDS 35.0%
TAAAGAGTTAAGGAGTCGAA+TGG + chr8.2:20646104-20646123 MS.gene49270:CDS 35.0%
TAACACCAAAGAGTTTGAAG+AGG + chr8.2:20646313-20646332 MS.gene49270:CDS 35.0%
TACTTTGATGAAGATGGAGA+CGG + chr8.2:20646069-20646088 MS.gene49270:CDS 35.0%
TCATGGCCTGGAAAAATATT+TGG + chr8.2:20646776-20646795 MS.gene49270:CDS 35.0%
! TGAAATTGCTATTGAGGCAT+TGG + chr8.2:20646161-20646180 MS.gene49270:CDS 35.0%
!! AGATTTGATTTGGATGGAGA+TGG + chr8.2:20646393-20646412 MS.gene49270:CDS 35.0%
AAATACCGAGGAAATTTCCG+AGG + chr8.2:20646808-20646827 MS.gene49270:CDS 40.0%
AAGTTCCTCGGAAATTTCCT+CGG - chr8.2:20646816-20646835 None:intergenic 40.0%
ATAACGCTTATGGAATCAGG+GGG + chr8.2:20646222-20646241 MS.gene49270:CDS 40.0%
ATGAGTTCCTCGGAAAAAGT+TGG - chr8.2:20646760-20646779 None:intergenic 40.0%
ATTTCAGTGCTTTCTTGTGG+TGG - chr8.2:20646690-20646709 None:intergenic 40.0%
GGAATTTCAGTGCTTTCTTG+TGG - chr8.2:20646693-20646712 None:intergenic 40.0%
GGGAGAGGAAGAAAAATTGA+AGG + chr8.2:20646242-20646261 MS.gene49270:CDS 40.0%
TCCTCGGAATTAAGATGTGA+TGG + chr8.2:20646855-20646874 MS.gene49270:CDS 40.0%
TCGGAAATTTCCTCGGTATT+TGG - chr8.2:20646809-20646828 None:intergenic 40.0%
! TTCCAAGGAATTTTGTGCCT+CGG - chr8.2:20646714-20646733 None:intergenic 40.0%
!! AACTTTTTCCGAGGAACTCA+TGG + chr8.2:20646759-20646778 MS.gene49270:CDS 40.0%
!! AAGAAAGCACTGAAATTCCG+AGG + chr8.2:20646694-20646713 MS.gene49270:intron 40.0%
!! ATTGAGGCATTGGATTCTGA+CGG + chr8.2:20646171-20646190 MS.gene49270:CDS 40.0%
!! TGATGGGTTATTGAGTTTGG+AGG + chr8.2:20646194-20646213 MS.gene49270:CDS 40.0%
ATTCCGAGGACATGTTTCCT+CGG - chr8.2:20646845-20646864 None:intergenic 45.0%
CATTGGATTCTGACGGTGAT+GGG + chr8.2:20646178-20646197 MS.gene49270:CDS 45.0%
CCTCGGAAACAAAAGTTCCT+CGG - chr8.2:20646828-20646847 None:intergenic 45.0%
GCCATCACATCTTAATTCCG+AGG - chr8.2:20646859-20646878 None:intergenic 45.0%
GGAAGTCGTCTAAATCTCCT+CGG + chr8.2:20646730-20646749 MS.gene49270:CDS 45.0%
GGAGATTTAGACGACTTCCA+AGG - chr8.2:20646729-20646748 None:intergenic 45.0%
TGGTTGCAATCCAAATACCG+AGG + chr8.2:20646796-20646815 MS.gene49270:CDS 45.0%
TTCCGAGGCACAAAATTCCT+TGG + chr8.2:20646709-20646728 MS.gene49270:CDS 45.0%
TTTCCGAGGAAACATGTCCT+CGG + chr8.2:20646839-20646858 MS.gene49270:CDS 45.0%
!! CGGAAAAAGTTGGTATTCCG+AGG - chr8.2:20646750-20646769 None:intergenic 45.0%
!! CGGAATACCAACTTTTTCCG+AGG + chr8.2:20646750-20646769 MS.gene49270:CDS 45.0%
!! CGGTGATGGGTTATTGAGTT+TGG + chr8.2:20646191-20646210 MS.gene49270:CDS 45.0%
!!! TGCTTTCTGGTTTTTGCCAG+TGG + chr8.2:20646492-20646511 MS.gene49270:intron 45.0%
AGGAGTCGAATGGCGAAGAT+TGG + chr8.2:20646114-20646133 MS.gene49270:CDS 50.0%
AGTCGAATGGCGAAGATTGG+CGG + chr8.2:20646117-20646136 MS.gene49270:CDS 50.0%
GCATTGGATTCTGACGGTGA+TGG + chr8.2:20646177-20646196 MS.gene49270:CDS 50.0%
TTTCCAGGCCATGAGTTCCT+CGG - chr8.2:20646770-20646789 None:intergenic 50.0%
! TGGTTTTTGCCAGTGGCTGA+GGG + chr8.2:20646499-20646518 MS.gene49270:intron 50.0%
!! CCGAGGAACTTTTGTTTCCG+AGG + chr8.2:20646825-20646844 MS.gene49270:CDS 50.0%
GAATGAAACCCCTCAGCCAC+TGG - chr8.2:20646511-20646530 None:intergenic 55.0%
GCTTATGGAATCAGGGGGAG+AGG + chr8.2:20646227-20646246 MS.gene49270:CDS 55.0%
TTTCCGAGGAACTCATGGCC+TGG + chr8.2:20646764-20646783 MS.gene49270:CDS 55.0%
! GGTTTTTGCCAGTGGCTGAG+GGG + chr8.2:20646500-20646519 MS.gene49270:intron 55.0%
!! CTGGTTTTTGCCAGTGGCTG+AGG + chr8.2:20646498-20646517 MS.gene49270:intron 55.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 20646033 20646893 20646033 ID=MS.gene49270
chr8.2 mRNA 20646033 20646893 20646033 ID=MS.gene49270.t1;Parent=MS.gene49270
chr8.2 exon 20646033 20646414 20646033 ID=MS.gene49270.t1.exon1;Parent=MS.gene49270.t1
chr8.2 CDS 20646033 20646414 20646033 ID=cds.MS.gene49270.t1;Parent=MS.gene49270.t1
chr8.2 exon 20646697 20646893 20646697 ID=MS.gene49270.t1.exon2;Parent=MS.gene49270.t1
chr8.2 CDS 20646697 20646893 20646697 ID=cds.MS.gene49270.t1;Parent=MS.gene49270.t1
Gene Sequence

>MS.gene49270

ATGAGGAGGGAAATGGAATTTGAGCGTGTTCTTAGTTACTTTGATGAAGATGGAGACGGAAAAATTTCGCCTAAAGAGTTAAGGAGTCGAATGGCGAAGATTGGCGGAGAGTTTCAATTGAAAGAAGTTGAAATTGCTATTGAGGCATTGGATTCTGACGGTGATGGGTTATTGAGTTTGGAGGATTTAATAACGCTTATGGAATCAGGGGGAGAGGAAGAAAAATTGAAGGATTTGAGAGAAGCTTTTGAAATGTATGATAATGAAGGATGTGGATTCATAACACCAAAGAGTTTGAAGAGGATGTTGAAAAAGTTGGGAGATTCTAAGTCCATTGAAGAATGCAAGTTGATGATTAAAAGATTTGATTTGGATGGAGATGGTGTGCTTAGTTTTGAAGAGTTCAGAATTATGATGGAGTGAATGATGATGATGATGTATATATGTGATGTGTTTATATGCTTTCTGGTTTTTGCCAGTGGCTGAGGGGTTTCATTCATTATTCTTTTGTACATTTGTTATGACTAATTGCTTTTATGCTATTGTAAATTCATATAAATCTTGTTTTGGTAATTTACTAGCACTTAATAACAATTTGAGATTGAGGTATGGGATGAAAATTAACTTAGCTACAAAAAAACATTAAAGTTTACACCACCACAAGAAAGCACTGAAATTCCGAGGCACAAAATTCCTTGGAAGTCGTCTAAATCTCCTCGGAATACCAACTTTTTCCGAGGAACTCATGGCCTGGAAAAATATTTGGTTGCAATCCAAATACCGAGGAAATTTCCGAGGAACTTTTGTTTCCGAGGAAACATGTCCTCGGAATTAAGATGTGATGGCAGAAACACAGACTGA
Protein sequence

>MS.gene49270.t1

MRREMEFERVLSYFDEDGDGKISPKELRSRMAKIGGEFQLKEVEIAIEALDSDGDGLLSLEDLITLMESGGEEEKLKDLREAFEMYDNEGCGFITPKSLKRMLKKLGDSKSIEECKLMIKRFDLDGDESTEIPRHKIPWKSSKSPRNTNFFRGTHGLEKYLVAIQIPRKFPRNFCFRGNMSSELRCDGRNTD