AlfalfaGEDB | MS.gene29793

M. sativa cultivar XinJiangDaYe / MS.gene29793

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29793.t1	XP_024635986.1	97.8	45	1	0	1	45	1	45	1.30E-15	92.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29793.t1	G7J5J1	97.8	45	1	0	1	45	1	45	9.7e-16	92.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene04998	MS.gene29793	0.822603	2.17E-53	-1.69E-46
MS.gene051226	MS.gene29793	0.813095	3.05E-51	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene29793	MS.gene21696	PPI
MS.gene87673	MS.gene29793	PPI
MS.gene05284	MS.gene29793	PPI
MS.gene21931	MS.gene29793	PPI
MS.gene046988	MS.gene29793	PPI
MS.gene29793	MS.gene64317	PPI
MS.gene64316	MS.gene29793	PPI
MS.gene63281	MS.gene29793	PPI
MS.gene68345	MS.gene29793	PPI
MS.gene017446	MS.gene29793	PPI
MS.gene066863	MS.gene29793	PPI
MS.gene89216	MS.gene29793	PPI
MS.gene001246	MS.gene29793	PPI
MS.gene040127	MS.gene29793	PPI
MS.gene62258	MS.gene29793	PPI
MS.gene64310	MS.gene29793	PPI
MS.gene000724	MS.gene29793	PPI
MS.gene052672	MS.gene29793	PPI
MS.gene64311	MS.gene29793	PPI
MS.gene29793	MS.gene79028	PPI
MS.gene25186	MS.gene29793	PPI
MS.gene008831	MS.gene29793	PPI
MS.gene96913	MS.gene29793	PPI
MS.gene58906	MS.gene29793	PPI
MS.gene020515	MS.gene29793	PPI
MS.gene58860	MS.gene29793	PPI
MS.gene83068	MS.gene29793	PPI
MS.gene27516	MS.gene29793	PPI
MS.gene02545	MS.gene29793	PPI
MS.gene053319	MS.gene29793	PPI
MS.gene04915	MS.gene29793	PPI
MS.gene61009	MS.gene29793	PPI
MS.gene64327	MS.gene29793	PPI
MS.gene000738	MS.gene29793	PPI
MS.gene64307	MS.gene29793	PPI
MS.gene061261	MS.gene29793	PPI
MS.gene29793	MS.gene025797	PPI
MS.gene026618	MS.gene29793	PPI
MS.gene04917	MS.gene29793	PPI
MS.gene29793	MS.gene21931	PPI
MS.gene29793	MS.gene64314	PPI
MS.gene29793	MS.gene09960	PPI
MS.gene074045	MS.gene29793	PPI
MS.gene026530	MS.gene29793	PPI
MS.gene47195	MS.gene29793	PPI
MS.gene036930	MS.gene29793	PPI
MS.gene013748	MS.gene29793	PPI
MS.gene55545	MS.gene29793	PPI
MS.gene29793	MS.gene53650	PPI
MS.gene65954	MS.gene29793	PPI
MS.gene008225	MS.gene29793	PPI
MS.gene29793	MS.gene93763	PPI
MS.gene29793	MS.gene80012	PPI
MS.gene066862	MS.gene29793	PPI
MS.gene015658	MS.gene29793	PPI
MS.gene024717	MS.gene29793	PPI
MS.gene64308	MS.gene29793	PPI
MS.gene64313	MS.gene29793	PPI
MS.gene93087	MS.gene29793	PPI
MS.gene62689	MS.gene29793	PPI
MS.gene97948	MS.gene29793	PPI
MS.gene003880	MS.gene29793	PPI
MS.gene54637	MS.gene29793	PPI
MS.gene67281	MS.gene29793	PPI
MS.gene025777	MS.gene29793	PPI
MS.gene062239	MS.gene29793	PPI
MS.gene29793	MS.gene53659	PPI
MS.gene46886	MS.gene29793	PPI
MS.gene29793	MS.gene98972	PPI
MS.gene026940	MS.gene29793	PPI
MS.gene29793	MS.gene061768	PPI
MS.gene29793	MS.gene89216	PPI
MS.gene21155	MS.gene29793	PPI
MS.gene71207	MS.gene29793	PPI
MS.gene92775	MS.gene29793	PPI
MS.gene07422	MS.gene29793	PPI
MS.gene03228	MS.gene29793	PPI
MS.gene09934	MS.gene29793	PPI
MS.gene96922	MS.gene29793	PPI
MS.gene21932	MS.gene29793	PPI
MS.gene28338	MS.gene29793	PPI
MS.gene85596	MS.gene29793	PPI
MS.gene94551	MS.gene29793	PPI
MS.gene056383	MS.gene29793	PPI
MS.gene64324	MS.gene29793	PPI
MS.gene29793	MS.gene64316	PPI
MS.gene015470	MS.gene29793	PPI
MS.gene041795	MS.gene29793	PPI
MS.gene63000	MS.gene29793	PPI
MS.gene22553	MS.gene29793	PPI
MS.gene53662	MS.gene29793	PPI
MS.gene057293	MS.gene29793	PPI
MS.gene80011	MS.gene29793	PPI
MS.gene96914	MS.gene29793	PPI
MS.gene53648	MS.gene29793	PPI
MS.gene070168	MS.gene29793	PPI
MS.gene29793	MS.gene056461	PPI
MS.gene29793	MS.gene64310	PPI
MS.gene53659	MS.gene29793	PPI
MS.gene29793	MS.gene29459	PPI
MS.gene038456	MS.gene29793	PPI
MS.gene004899	MS.gene29793	PPI
MS.gene80013	MS.gene29793	PPI
MS.gene009021	MS.gene29793	PPI
MS.gene46237	MS.gene29793	PPI
MS.gene070167	MS.gene29793	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29793.t1	MTR_3g089070	98.571	140	2	0	1	140	1	140	6.82e-97	275
MS.gene29793.t1	MTR_3g089090	98.561	139	2	0	2	140	1	139	3.61e-96	273
MS.gene29793.t1	MTR_4g103630	73.571	140	37	0	1	140	1	140	1.49e-68	203
MS.gene29793.t1	MTR_4g103655	73.381	139	37	0	1	139	1	139	3.66e-67	200
MS.gene29793.t1	MTR_4g103650	75.940	133	32	0	7	139	3	135	5.04e-67	199
MS.gene29793.t1	MTR_6g023460	56.835	139	60	0	1	139	3	141	4.54e-53	164
MS.gene29793.t1	MTR_8g078270	47.407	135	70	1	6	139	53	187	4.27e-34	117
MS.gene29793.t1	MTR_8g107110	39.695	131	79	0	10	140	28	158	3.47e-29	104
MS.gene29793.t1	MTR_3g067610	39.695	131	76	1	10	140	9	136	4.37e-29	103
MS.gene29793.t1	MTR_7g075040	40.278	144	76	4	7	140	48	191	4.15e-27	100
MS.gene29793.t1	MTR_5g079340	39.394	132	76	2	10	139	8	137	4.21e-27	98.6
MS.gene29793.t1	MTR_1g032070	38.806	134	81	1	7	139	47	180	4.91e-26	97.4
MS.gene29793.t1	MTR_1g046950	38.346	133	79	1	10	139	8	140	6.44e-26	95.5
MS.gene29793.t1	MTR_8g036075	37.762	143	80	3	7	140	50	192	2.69e-24	92.8
MS.gene29793.t1	MTR_8g105230	38.462	130	79	1	7	135	37	166	4.17e-24	92.4
MS.gene29793.t1	MTR_4g067270	37.143	140	79	3	7	140	6	142	1.42e-23	89.7
MS.gene29793.t1	MTR_1g047100	36.029	136	77	2	10	139	8	139	2.15e-23	89.0
MS.gene29793.t1	MTR_1g076650	35.971	139	78	2	7	139	13	146	2.92e-23	89.0
MS.gene29793.t1	MTR_7g087610	33.813	139	81	2	7	139	13	146	3.35e-23	89.0
MS.gene29793.t1	MTR_6g079570	37.405	131	81	1	10	139	30	160	5.74e-23	89.0
MS.gene29793.t1	MTR_4g086260	35.385	130	83	1	10	139	61	189	1.68e-22	88.2
MS.gene29793.t1	MTR_5g088320	33.094	139	82	2	7	139	13	146	6.17e-22	85.5
MS.gene29793.t1	MTR_6g025320	33.094	139	82	2	7	139	13	146	6.94e-22	85.5
MS.gene29793.t1	MTR_5g017510	34.586	133	86	1	8	139	50	182	8.96e-22	86.3
MS.gene29793.t1	MTR_5g017560	34.586	133	86	1	8	139	50	182	8.96e-22	86.3
MS.gene29793.t1	MTR_1g041285	36.220	127	80	1	14	139	20	146	1.16e-21	85.1
MS.gene29793.t1	MTR_5g017550	34.328	134	84	2	8	139	50	181	7.87e-20	81.3
MS.gene29793.t1	MTR_8g066630	33.582	134	77	2	10	135	21	150	4.12e-19	78.6
MS.gene29793.t1	MTR_7g089760	34.815	135	85	2	9	140	8	142	4.86e-19	78.2
MS.gene29793.t1	MTR_1g071150	29.630	135	95	0	5	139	11	145	1.97e-17	73.9
MS.gene29793.t1	MTR_4g112460	33.083	133	86	2	10	139	15	147	8.61e-17	72.8
MS.gene29793.t1	MTR_5g008705	31.746	126	79	2	14	135	2	124	1.34e-16	71.2
MS.gene29793.t1	MTR_7g090450	34.307	137	84	3	9	139	76	212	2.94e-16	72.4
MS.gene29793.t1	MTR_0168s0120	32.174	115	67	2	31	139	1	110	5.52e-16	69.3
MS.gene29793.t1	MTR_6g025320	32.174	115	67	2	31	139	1	110	5.52e-16	69.3
MS.gene29793.t1	MTR_5g008695	34.234	111	70	1	31	138	2	112	1.39e-15	68.2
MS.gene29793.t1	MTR_7g115040	33.582	134	88	1	7	139	13	146	2.53e-15	68.6
MS.gene29793.t1	MTR_8g069915	30.827	133	89	2	10	139	16	148	3.39e-15	68.6
MS.gene29793.t1	MTR_4g115170	32.895	152	79	5	10	140	68	217	4.06e-15	69.7
MS.gene29793.t1	MTR_7g074240	32.857	140	81	2	14	140	32	171	4.30e-15	68.6
MS.gene29793.t1	MTR_2g098890	34.058	138	86	2	8	140	66	203	7.71e-15	68.6
MS.gene29793.t1	MTR_7g068710	33.333	126	84	0	15	140	370	495	8.36e-15	70.5
MS.gene29793.t1	MTR_5g009830	32.117	137	88	2	6	140	371	504	1.09e-14	70.1
MS.gene29793.t1	MTR_3g083470	33.083	133	78	4	8	139	95	217	1.55e-14	68.2
MS.gene29793.t1	MTR_8g099095	31.387	137	89	2	6	140	371	504	1.73e-14	69.3
MS.gene29793.t1	MTR_6g007613	32.812	128	85	1	14	140	37	164	1.88e-14	66.6
MS.gene29793.t1	MTR_7g074020	32.031	128	86	1	14	140	38	165	8.41e-14	65.1
MS.gene29793.t1	MTR_5g092810	30.657	137	90	2	6	140	397	530	2.57e-13	66.2
MS.gene29793.t1	MTR_5g089320	28.676	136	92	2	6	139	373	505	3.55e-13	65.5
MS.gene29793.t1	MTR_0028s0170	28.148	135	96	1	6	140	383	516	4.76e-13	65.5
MS.gene29793.t1	MTR_1g054865	30.147	136	93	1	5	140	465	598	1.49e-12	63.9
MS.gene29793.t1	MTR_1g052530	30.147	136	95	0	5	140	356	491	1.50e-12	63.9
MS.gene29793.t1	MTR_7g091890	30.714	140	89	2	5	140	362	497	1.91e-12	63.5
MS.gene29793.t1	MTR_1g026190	27.737	137	94	2	6	140	387	520	2.01e-12	63.5
MS.gene29793.t1	MTR_3g098070	29.927	137	92	2	5	140	333	466	2.57e-12	63.2
MS.gene29793.t1	MTR_3g098090	29.927	137	92	2	5	140	336	469	2.63e-12	63.2
MS.gene29793.t1	MTR_3g051770	28.369	141	95	2	6	140	388	528	9.91e-12	61.6
MS.gene29793.t1	MTR_5g027000	28.346	127	90	1	10	135	26	152	1.12e-11	59.3
MS.gene29793.t1	MTR_4g107490	27.559	127	90	2	15	140	387	512	2.82e-11	60.1
MS.gene29793.t1	MTR_4g066660	31.159	138	88	3	6	140	377	510	2.84e-11	60.1
MS.gene29793.t1	MTR_8g095440	29.197	137	93	2	5	140	334	467	3.71e-11	59.7
MS.gene29793.t1	MTR_4g082050	32.283	127	75	3	23	140	15	139	3.98e-11	57.4
MS.gene29793.t1	MTR_6g007613	31.579	114	77	1	14	126	37	150	6.31e-11	57.4
MS.gene29793.t1	MTR_4g132070	28.467	137	93	2	6	140	396	529	6.96e-11	58.9
MS.gene29793.t1	MTR_1g096490	27.007	137	96	2	5	140	334	467	9.91e-11	58.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29793.t1	AT1G76650	46.377	138	74	0	3	140	40	177	1.29e-36	124
MS.gene29793.t1	AT1G76650	46.377	138	74	0	3	140	40	177	1.29e-36	124
MS.gene29793.t1	AT1G76640	46.853	143	69	3	3	140	19	159	3.60e-35	119
MS.gene29793.t1	AT1G76650	44.928	138	66	1	3	140	40	167	1.61e-33	115
MS.gene29793.t1	AT3G50770	46.715	137	67	2	9	139	67	203	2.86e-33	116
MS.gene29793.t1	AT5G42380	44.361	133	72	1	10	140	53	185	6.55e-33	114
MS.gene29793.t1	AT5G37770	37.410	139	82	1	7	140	18	156	6.18e-27	99.0
MS.gene29793.t1	AT5G37770	37.410	139	82	1	7	140	18	156	6.18e-27	99.0
MS.gene29793.t1	AT3G01830	40.876	137	76	2	7	140	12	146	1.49e-26	97.4
MS.gene29793.t1	AT1G24620	39.552	134	80	1	7	139	38	171	2.32e-26	98.2
MS.gene29793.t1	AT1G18210	37.692	130	78	1	10	139	27	153	1.65e-24	92.8
MS.gene29793.t1	AT1G18210	37.692	130	78	1	10	139	27	153	1.65e-24	92.8
MS.gene29793.t1	AT1G66400	34.586	133	84	1	10	139	19	151	2.07e-24	92.0
MS.gene29793.t1	AT1G73630	34.351	131	83	1	10	140	24	151	7.46e-24	90.9
MS.gene29793.t1	AT1G05990	37.681	138	82	2	7	140	6	143	1.81e-22	87.0
MS.gene29793.t1	AT2G15680	36.842	133	81	2	9	140	53	183	2.11e-22	87.8
MS.gene29793.t1	AT3G56800	33.813	139	81	2	7	139	13	146	3.24e-22	86.3
MS.gene29793.t1	AT2G27030	33.813	139	81	2	7	139	13	146	3.24e-22	86.3
MS.gene29793.t1	AT2G41110	33.813	139	81	2	7	139	13	146	3.24e-22	86.3
MS.gene29793.t1	AT3G22930	34.328	134	87	1	7	139	36	169	3.35e-22	87.0
MS.gene29793.t1	AT5G37780	33.094	139	82	2	7	139	13	146	3.73e-22	86.3
MS.gene29793.t1	AT5G21274	33.813	139	81	2	7	139	13	146	3.73e-22	86.3
MS.gene29793.t1	AT1G66410	33.094	139	82	2	7	139	13	146	3.73e-22	86.3
MS.gene29793.t1	AT3G43810	33.094	139	82	2	7	139	13	146	7.27e-22	85.5
MS.gene29793.t1	AT2G27030	33.813	139	81	2	7	139	13	146	8.46e-22	86.3
MS.gene29793.t1	AT3G07490	36.620	142	87	2	2	140	1	142	1.12e-21	85.1
MS.gene29793.t1	AT5G17470	34.328	134	85	1	10	140	6	139	1.18e-21	84.7
MS.gene29793.t1	AT3G43810	33.094	139	82	2	7	139	13	146	4.80e-21	85.1
MS.gene29793.t1	AT4G14640	33.582	134	88	1	7	139	14	147	5.73e-21	83.2
MS.gene29793.t1	AT4G03290	35.374	147	85	4	2	140	1	145	7.56e-21	82.8
MS.gene29793.t1	AT2G43290	32.867	143	86	3	7	140	66	207	4.31e-20	82.4
MS.gene29793.t1	AT3G59440	33.333	135	88	1	8	140	53	187	1.40e-19	80.9
MS.gene29793.t1	AT2G41110	31.788	151	80	3	7	139	13	158	1.47e-19	79.7
MS.gene29793.t1	AT3G50360	35.156	128	82	1	14	140	35	162	5.55e-19	78.6
MS.gene29793.t1	AT3G10190	34.586	133	85	2	9	139	73	205	1.57e-18	78.2
MS.gene29793.t1	AT4G12860	34.815	135	85	2	9	140	8	142	2.38e-18	76.6
MS.gene29793.t1	AT2G41100	29.801	151	88	2	7	139	67	217	3.98e-18	78.6
MS.gene29793.t1	AT2G41100	29.801	151	88	2	7	139	67	217	3.98e-18	78.6
MS.gene29793.t1	AT2G41100	29.801	151	88	2	7	139	67	217	3.98e-18	78.6
MS.gene29793.t1	AT5G37780	29.870	154	82	3	7	139	13	161	6.40e-18	75.9
MS.gene29793.t1	AT2G41100	29.801	151	88	2	7	139	102	252	6.44e-18	78.6
MS.gene29793.t1	AT2G41100	27.333	150	92	2	7	139	13	162	1.67e-15	71.6
MS.gene29793.t1	AT2G41100	29.801	151	88	2	7	139	102	252	6.44e-18	78.6
MS.gene29793.t1	AT2G41100	27.333	150	92	2	7	139	13	162	1.67e-15	71.6
MS.gene29793.t1	AT5G37780	31.746	126	75	2	20	139	13	133	4.61e-17	72.8
MS.gene29793.t1	AT2G36180	31.111	135	89	2	10	140	4	138	4.68e-17	72.8
MS.gene29793.t1	AT1G66410	31.746	126	75	2	20	139	36	156	6.84e-17	72.8
MS.gene29793.t1	AT5G37780	31.746	126	75	2	20	139	52	172	1.10e-16	72.8
MS.gene29793.t1	AT4G14640	32.231	121	81	1	20	139	9	129	1.26e-16	71.6
MS.gene29793.t1	AT1G18530	31.579	133	88	1	10	139	11	143	2.38e-16	71.2
MS.gene29793.t1	AT1G66410	32.174	115	67	2	31	139	1	110	3.80e-16	69.7
MS.gene29793.t1	AT1G66410	32.174	115	67	2	31	139	1	110	3.80e-16	69.7
MS.gene29793.t1	AT3G43810	32.174	115	67	2	31	139	1	110	5.78e-16	69.3
MS.gene29793.t1	AT3G43810	32.174	115	67	2	31	139	1	110	5.78e-16	69.3
MS.gene29793.t1	AT3G03400	29.927	137	87	4	2	132	1	134	2.03e-15	68.6
MS.gene29793.t1	AT3G51850	34.921	126	82	0	15	140	368	493	2.74e-15	71.6
MS.gene29793.t1	AT4G23650	33.577	137	86	2	6	140	383	516	6.74e-15	70.5
MS.gene29793.t1	AT4G37010	28.788	132	93	1	10	140	31	162	6.81e-15	67.8
MS.gene29793.t1	AT4G37010	28.788	132	93	1	10	140	35	166	7.20e-15	67.8
MS.gene29793.t1	AT1G32250	30.657	137	80	2	10	135	20	152	9.57e-15	67.4
MS.gene29793.t1	AT5G12180	31.111	135	92	1	6	140	378	511	1.97e-14	69.3
MS.gene29793.t1	AT5G19360	30.370	135	93	1	6	140	373	506	2.98e-14	68.9
MS.gene29793.t1	AT1G76040	30.657	137	90	2	6	140	178	311	4.60e-14	67.8
MS.gene29793.t1	AT1G76040	30.657	137	90	2	6	140	178	311	4.60e-14	67.8
MS.gene29793.t1	AT1G76040	30.657	137	90	2	6	140	416	549	5.00e-14	68.2
MS.gene29793.t1	AT2G41090	27.820	133	94	1	7	139	13	143	5.68e-14	65.9
MS.gene29793.t1	AT3G51920	29.104	134	94	1	7	139	13	146	6.85e-14	64.7
MS.gene29793.t1	AT3G10660	31.655	139	87	4	5	140	490	623	8.26e-13	64.7
MS.gene29793.t1	AT3G10660	31.655	139	87	4	5	140	490	623	8.26e-13	64.7
MS.gene29793.t1	AT5G12480	29.197	137	96	1	5	140	269	405	9.14e-13	64.3
MS.gene29793.t1	AT5G12480	29.197	137	96	1	5	140	363	499	9.36e-13	64.3
MS.gene29793.t1	AT3G03000	30.303	132	90	1	10	139	24	155	1.26e-12	62.0
MS.gene29793.t1	AT1G74740	32.308	130	80	3	15	140	373	498	1.38e-12	63.9
MS.gene29793.t1	AT3G25600	30.075	133	90	2	10	139	16	148	1.51e-12	61.6
MS.gene29793.t1	AT2G41410	31.111	135	89	3	9	139	73	207	1.54e-12	62.4
MS.gene29793.t1	AT2G41100	32.407	108	55	2	50	139	20	127	2.25e-12	62.0
MS.gene29793.t1	AT5G23580	29.412	136	92	2	6	140	327	459	2.51e-12	63.2
MS.gene29793.t1	AT4G04695	28.889	135	95	1	6	140	336	469	3.58e-12	62.8
MS.gene29793.t1	AT3G57530	30.714	140	88	4	5	140	367	501	6.34e-12	62.0
MS.gene29793.t1	AT2G31500	32.374	139	91	2	5	140	370	508	6.42e-12	62.0
MS.gene29793.t1	AT1G50700	27.737	137	94	2	6	140	378	511	1.93e-11	60.8
MS.gene29793.t1	AT4G04700	29.927	137	91	2	6	140	336	469	2.83e-11	60.1
MS.gene29793.t1	AT4G09570	28.676	136	93	2	6	140	330	462	2.93e-11	60.1
MS.gene29793.t1	AT1G35670	28.676	136	93	2	6	140	331	463	3.10e-11	60.1
MS.gene29793.t1	AT1G12310	28.346	127	88	2	14	139	21	145	3.48e-11	57.8
MS.gene29793.t1	AT5G04870	30.216	139	89	4	5	140	454	587	3.57e-11	60.1
MS.gene29793.t1	AT3G20410	27.737	137	94	2	6	140	396	529	3.82e-11	59.7
MS.gene29793.t1	AT3G20410	27.737	137	94	2	6	140	396	529	3.82e-11	59.7
MS.gene29793.t1	AT2G41860	30.075	133	87	2	11	140	364	493	5.83e-11	59.3
MS.gene29793.t1	AT1G62820	28.346	127	88	2	14	139	21	145	6.08e-11	57.0
MS.gene29793.t1	AT4G21940	29.197	137	92	2	6	140	406	539	6.11e-11	59.3
MS.gene29793.t1	AT2G41860	30.075	133	87	2	11	140	364	493	6.17e-11	59.3
MS.gene29793.t1	AT4G21940	29.197	137	92	2	6	140	406	539	6.46e-11	59.3
MS.gene29793.t1	AT4G04720	29.197	137	92	2	6	140	384	517	7.71e-11	58.9
MS.gene29793.t1	AT4G04720	29.197	137	92	2	6	140	384	517	7.71e-11	58.9

Find 22 sgRNAs with CRISPR-Local

Find 27 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGCATCCTCTTCAAACTCTT+TGG	0.279285	3.4:+73420012	None:intergenic
GGAGGAATTAATTGCTTTGA+TGG	0.320451	3.4:-73420118	MS.gene29793:CDS
TGGTGATGGTTATTTGAGTT+TGG	0.333482	3.4:-73420139	MS.gene29793:CDS
TTTGTTGAAAGAAGCTGAAA+TGG	0.376240	3.4:-73420184	MS.gene29793:CDS
AGCCTCTGTCTTAGCTCTGC+TGG	0.386134	3.4:+73420228	None:intergenic
GAAGAGGATGCTTAAGAAGA+TGG	0.388089	3.4:-73420001	MS.gene29793:CDS
AGACAGAGGCTAAGAGTAAT+GGG	0.414746	3.4:-73420216	MS.gene29793:CDS
TTAATTGCTTTGATGGAGGA+AGG	0.458662	3.4:-73420111	MS.gene29793:CDS
TGGAGAAGAACAAAAGTTGA+AGG	0.479397	3.4:-73420088	MS.gene29793:CDS
AAGAGGATGCTTAAGAAGAT+GGG	0.484014	3.4:-73420000	MS.gene29793:CDS
AAGACAGAGGCTAAGAGTAA+TGG	0.500258	3.4:-73420217	MS.gene29793:CDS
ATTGCTTTGATGGAGGAAGG+TGG	0.541567	3.4:-73420108	MS.gene29793:CDS
TGATGGTTATTTGAGTTTGG+AGG	0.566788	3.4:-73420136	MS.gene29793:CDS
GGAATTAATTGCTTTGATGG+AGG	0.567051	3.4:-73420115	MS.gene29793:CDS
TAACACCAAAGAGTTTGAAG+AGG	0.591633	3.4:-73420017	MS.gene29793:CDS
CACCAGCAGAGCTAAGACAG+AGG	0.625620	3.4:-73420230	MS.gene29793:CDS
TGAAATGGCTATTGAAGCAG+TGG	0.626317	3.4:-73420169	MS.gene29793:CDS
ATTGAAGCAGTGGATTCAGA+TGG	0.638749	3.4:-73420159	MS.gene29793:CDS
TGAGAGATGATGAAGAACGC+GGG	0.672274	3.4:-73420303	None:intergenic
GTGAGAGATGATGAAGAACG+CGG	0.689928	3.4:-73420304	None:intergenic
GCAGTGGATTCAGATGGTGA+TGG	0.712163	3.4:-73420153	MS.gene29793:CDS
ATGTATGATAGTGAGAAGTG+TGG	0.719192	3.4:-73420045	MS.gene29793:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TATGATTAAACATTTTGATT+TGG	-	chr3.4:73420247-73420266	MS.gene29793:CDS	15.0%
!!!	ATTAAACATTTTGATTTGGA+TGG	-	chr3.4:73420251-73420270	MS.gene29793:CDS	20.0%
!!!	TTAAACATTTTGATTTGGAT+GGG	-	chr3.4:73420252-73420271	MS.gene29793:CDS	20.0%
!!!	CTTAGATATTTTGATGAAGA+TGG	-	chr3.4:73419927-73419946	MS.gene29793:CDS	25.0%
!!!	TAAACATTTTGATTTGGATG+GGG	-	chr3.4:73420253-73420272	MS.gene29793:CDS	25.0%
	TTTGTTGAAAGAAGCTGAAA+TGG	-	chr3.4:73420010-73420029	MS.gene29793:CDS	30.0%
!!!	TATTTTGATGAAGATGGTGA+CGG	-	chr3.4:73419933-73419952	MS.gene29793:CDS	30.0%
	AAGAGGATGCTTAAGAAGAT+GGG	-	chr3.4:73420194-73420213	MS.gene29793:CDS	35.0%
	GGAATTAATTGCTTTGATGG+AGG	-	chr3.4:73420079-73420098	MS.gene29793:CDS	35.0%
	GGAGGAATTAATTGCTTTGA+TGG	-	chr3.4:73420076-73420095	MS.gene29793:CDS	35.0%
	TAACACCAAAGAGTTTGAAG+AGG	-	chr3.4:73420177-73420196	MS.gene29793:CDS	35.0%
	TGGAGAAGAACAAAAGTTGA+AGG	-	chr3.4:73420106-73420125	MS.gene29793:CDS	35.0%
	TTAATTGCTTTGATGGAGGA+AGG	-	chr3.4:73420083-73420102	MS.gene29793:CDS	35.0%
!	ATGTATGATAGTGAGAAGTG+TGG	-	chr3.4:73420149-73420168	MS.gene29793:CDS	35.0%
!	TGATGGTTATTTGAGTTTGG+AGG	-	chr3.4:73420058-73420077	MS.gene29793:CDS	35.0%
!!	TGGTGATGGTTATTTGAGTT+TGG	-	chr3.4:73420055-73420074	MS.gene29793:CDS	35.0%
	AAGACAGAGGCTAAGAGTAA+TGG	-	chr3.4:73419977-73419996	MS.gene29793:CDS	40.0%
	AGACAGAGGCTAAGAGTAAT+GGG	-	chr3.4:73419978-73419997	MS.gene29793:CDS	40.0%
	AGCATCCTCTTCAAACTCTT+TGG	+	chr3.4:73420185-73420204	None:intergenic	40.0%
	GAAGAGGATGCTTAAGAAGA+TGG	-	chr3.4:73420193-73420212	MS.gene29793:CDS	40.0%
	TGAAATGGCTATTGAAGCAG+TGG	-	chr3.4:73420025-73420044	MS.gene29793:CDS	40.0%
!	ATTGAAGCAGTGGATTCAGA+TGG	-	chr3.4:73420035-73420054	MS.gene29793:CDS	40.0%
!!!	CATTTTGATTTGGATGGGGA+TGG	-	chr3.4:73420257-73420276	MS.gene29793:CDS	40.0%
	ATTGCTTTGATGGAGGAAGG+TGG	-	chr3.4:73420086-73420105	MS.gene29793:CDS	45.0%
!	GCAGTGGATTCAGATGGTGA+TGG	-	chr3.4:73420041-73420060	MS.gene29793:CDS	50.0%
	CACCAGCAGAGCTAAGACAG+AGG	-	chr3.4:73419964-73419983	MS.gene29793:CDS	55.0%
!!	AGCCTCTGTCTTAGCTCTGC+TGG	+	chr3.4:73419969-73419988	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.4	gene	73419897	73420319	73419897	ID=MS.gene29793
chr3.4	mRNA	73419897	73420319	73419897	ID=MS.gene29793.t1;Parent=MS.gene29793
chr3.4	exon	73419897	73420319	73419897	ID=MS.gene29793.t1.exon1;Parent=MS.gene29793.t1
chr3.4	CDS	73419897	73420319	73419897	ID=cds.MS.gene29793.t1;Parent=MS.gene29793.t1

Gene Sequence

>MS.gene29793

ATGATGAAGAACGCGGGATTCGAACATGTTCTTAGATATTTTGATGAAGATGGTGACGGAAAAGTTTCACCAGCAGAGCTAAGACAGAGGCTAAGAGTAATGGGAGAAGAGATTTTGTTGAAAGAAGCTGAAATGGCTATTGAAGCAGTGGATTCAGATGGTGATGGTTATTTGAGTTTGGAGGAATTAATTGCTTTGATGGAGGAAGGTGGAGAAGAACAAAAGTTGAAGGATTTGAGAGAAGCATTTGAGATGTATGATAGTGAGAAGTGTGGTTTTATAACACCAAAGAGTTTGAAGAGGATGCTTAAGAAGATGGGTGAGTCTAAGTCTATTGATGAATGTAAAGCTATGATTAAACATTTTGATTTGGATGGGGATGGTTTGCTTAGCTTTGATGAATTCATAACAATGATGCAGTGA

Protein sequence

>MS.gene29793.t1

MMKNAGFEHVLRYFDEDGDGKVSPAELRQRLRVMGEEILLKEAEMAIEAVDSDGDGYLSLEELIALMEEGGEEQKLKDLREAFEMYDSEKCGFITPKSLKRMLKKMGESKSIDECKAMIKHFDLDGDGLLSFDEFITMMQ