AlfalfaGEDB | MS.gene047977

M. sativa cultivar XinJiangDaYe / MS.gene047977

KEGG: K22395
GO: GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0008150 GO:0008152 GO:0016491 GO:0036094 GO:0043167 GO:0043168 GO:0048037 GO:0050660 GO:0050662 GO:0055114 GO:0071949 GO:0097159 GO:1901265 GO:1901363
PFAM: PF01565.26 PF08031.15

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene047977.t1	XP_003594602.1	98.2	545	10	0	1	545	1	545	0.00E+00	1093.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene047977.t1	Q93ZA3	66.0	529	174	2	1	527	6	530	2.2e-211	736.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene047977.t1	G7IML7	98.2	545	10	0	1	545	1	545	0.0e+00	1093.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene28727	MS.gene047977	PPI
MS.gene35104	MS.gene047977	PPI
MS.gene56279	MS.gene047977	PPI
MS.gene35105	MS.gene047977	PPI
MS.gene047977	MS.gene36437	PPI
MS.gene36438	MS.gene047977	PPI
MS.gene28724	MS.gene047977	PPI
MS.gene51644	MS.gene047977	PPI
MS.gene35106	MS.gene047977	PPI
MS.gene047977	MS.gene36435	PPI
MS.gene047977	MS.gene35103	PPI
MS.gene63533	MS.gene047977	PPI
MS.gene36421	MS.gene047977	PPI
MS.gene009481	MS.gene047977	PPI
MS.gene28726	MS.gene047977	PPI
MS.gene56282	MS.gene047977	PPI
MS.gene028357	MS.gene047977	PPI
MS.gene28723	MS.gene047977	PPI
MS.gene028352	MS.gene047977	PPI
MS.gene028354	MS.gene047977	PPI
MS.gene63532	MS.gene047977	PPI
MS.gene28742	MS.gene047977	PPI
MS.gene56278	MS.gene047977	PPI
MS.gene009479	MS.gene047977	PPI
MS.gene51646	MS.gene047977	PPI
MS.gene63535	MS.gene047977	PPI
MS.gene028369	MS.gene047977	PPI
MS.gene35083	MS.gene047977	PPI
MS.gene35102	MS.gene047977	PPI
MS.gene047977	MS.gene028353	PPI
MS.gene047977	MS.gene51643	PPI
MS.gene28725	MS.gene047977	PPI
MS.gene36439	MS.gene047977	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene047977.t1	MTR_2g031390	98.165	545	10	0	1	545	1	545	0.0	1114
MS.gene047977.t1	MTR_4g094518	79.802	505	102	0	27	531	28	532	0.0	825
MS.gene047977.t1	MTR_4g094520	71.048	525	151	1	7	531	11	534	0.0	765
MS.gene047977.t1	MTR_4g094488	53.383	532	233	7	8	527	7	535	0.0	567
MS.gene047977.t1	MTR_4g094492	52.150	535	242	7	6	529	5	536	0.0	563
MS.gene047977.t1	MTR_3g009760	53.598	528	233	7	7	529	2	522	0.0	561
MS.gene047977.t1	MTR_2g031560	51.145	524	250	5	9	529	3	523	0.0	560
MS.gene047977.t1	MTR_4g094495	52.523	535	238	7	7	527	6	538	0.0	560
MS.gene047977.t1	MTR_3g009820	53.598	528	233	8	7	529	2	522	0.0	556
MS.gene047977.t1	MTR_2g031590	50.860	523	250	4	13	530	13	533	0.0	554
MS.gene047977.t1	MTR_4g094480	52.354	531	240	7	7	527	6	533	0.0	553
MS.gene047977.t1	MTR_4g094478	51.306	536	250	6	6	532	5	538	0.0	552
MS.gene047977.t1	MTR_3g009880	52.672	524	237	8	9	529	5	520	0.0	546
MS.gene047977.t1	MTR_4g094498	53.280	503	229	3	32	533	41	538	0.0	541
MS.gene047977.t1	MTR_2g031420	52.381	525	241	5	9	529	8	527	0.0	538
MS.gene047977.t1	MTR_2g031460	51.028	535	252	6	9	539	8	536	0.0	538
MS.gene047977.t1	MTR_4g094418	55.378	437	185	5	101	529	1	435	3.55e-180	521
MS.gene047977.t1	MTR_2g031510	49.027	514	255	4	21	530	31	541	6.29e-172	497
MS.gene047977.t1	MTR_2g031490	47.505	541	268	7	2	530	3	539	5.24e-171	495
MS.gene047977.t1	MTR_4g094515	48.689	534	265	5	3	530	621	1151	2.86e-170	513
MS.gene047977.t1	MTR_4g094515	49.219	512	253	4	25	532	35	543	9.10e-161	488
MS.gene047977.t1	MTR_4g091150	49.901	507	246	7	28	529	37	540	5.00e-168	487
MS.gene047977.t1	MTR_4g091200	47.901	524	256	8	10	527	12	524	6.95e-167	484
MS.gene047977.t1	MTR_6g017205	46.355	535	274	7	9	539	11	536	8.27e-165	479
MS.gene047977.t1	MTR_4g057990	47.619	525	262	8	7	527	5	520	6.67e-164	476
MS.gene047977.t1	MTR_4g091190	47.137	524	264	7	9	527	11	526	4.69e-163	474
MS.gene047977.t1	MTR_4g088355	46.443	506	260	8	28	527	31	531	7.18e-158	461
MS.gene047977.t1	MTR_4g091170	46.256	454	222	6	76	527	107	540	6.85e-150	442
MS.gene047977.t1	MTR_2g023590	45.494	466	246	5	65	527	4	464	6.89e-144	423
MS.gene047977.t1	MTR_1g076830	41.243	531	297	7	16	538	21	544	1.13e-132	397
MS.gene047977.t1	MTR_3g009850	55.702	228	99	2	304	529	1	228	2.97e-85	264
MS.gene047977.t1	MTR_2g031600	51.502	233	111	1	13	245	14	244	2.51e-78	252
MS.gene047977.t1	MTR_2g031600	50.955	157	76	1	375	530	245	401	1.71e-51	181
MS.gene047977.t1	MTR_2g084370	45.946	111	38	2	127	237	1	89	1.31e-27	106
MS.gene047977.t1	MTR_8g062280	52.577	97	18	1	430	526	4	72	3.61e-26	102
MS.gene047977.t1	MTR_2g084405	48.913	92	42	1	127	218	1	87	1.17e-20	87.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene047977.t1	AT1G30760	68.182	506	155	2	24	527	47	548	0.0	718
MS.gene047977.t1	AT1G30760	68.182	506	155	2	24	527	29	530	0.0	717
MS.gene047977.t1	AT2G34790	65.649	524	173	3	6	527	10	528	0.0	711
MS.gene047977.t1	AT5G44400	63.993	536	181	7	3	529	4	536	0.0	683
MS.gene047977.t1	AT5G44390	60.259	541	201	8	2	531	5	542	0.0	652
MS.gene047977.t1	AT5G44380	59.612	515	200	5	21	530	69	580	0.0	611
MS.gene047977.t1	AT5G44380	59.612	515	200	5	21	530	29	540	0.0	610
MS.gene047977.t1	AT5G44360	49.609	512	242	8	27	531	30	532	2.11e-171	496
MS.gene047977.t1	AT5G44360	49.609	512	242	8	27	531	46	548	4.58e-171	495
MS.gene047977.t1	AT1G30700	47.348	528	270	5	8	530	3	527	2.26e-169	490
MS.gene047977.t1	AT4G20840	49.706	511	241	7	26	529	34	535	4.95e-168	487
MS.gene047977.t1	AT1G11770	47.191	534	263	9	9	530	4	530	4.11e-167	485
MS.gene047977.t1	AT4G20820	46.654	523	263	6	10	529	17	526	7.00e-166	481
MS.gene047977.t1	AT4G20860	47.665	514	256	7	23	529	22	529	1.78e-164	478
MS.gene047977.t1	AT1G30710	45.826	539	271	9	1	529	1	528	1.49e-161	470
MS.gene047977.t1	AT1G34575	45.992	524	266	10	9	527	11	522	4.70e-159	464
MS.gene047977.t1	AT1G26380	45.817	526	272	8	8	529	9	525	5.14e-159	464
MS.gene047977.t1	AT5G44440	45.113	532	274	8	6	527	4	527	3.33e-158	462
MS.gene047977.t1	AT5G44440	45.113	532	274	8	6	527	74	597	3.44e-157	462
MS.gene047977.t1	AT1G30730	45.611	524	275	7	9	527	5	523	2.45e-156	457
MS.gene047977.t1	AT1G26420	45.369	529	277	8	9	531	5	527	5.96e-155	454
MS.gene047977.t1	AT5G44410	46.529	533	256	10	9	527	10	527	3.46e-154	452
MS.gene047977.t1	AT4G20800	45.020	502	271	4	28	528	27	524	6.93e-154	451
MS.gene047977.t1	AT1G30740	46.442	534	269	9	8	530	2	529	3.77e-153	449
MS.gene047977.t1	AT1G26390	46.047	506	266	5	29	531	28	529	4.24e-153	449
MS.gene047977.t1	AT1G30740	46.442	534	269	9	8	530	5	532	5.39e-153	449
MS.gene047977.t1	AT4G20830	47.379	515	255	7	22	529	31	536	2.23e-152	447
MS.gene047977.t1	AT4G20830	46.617	532	266	8	22	544	31	553	2.33e-152	448
MS.gene047977.t1	AT1G01980	46.821	519	257	9	23	530	25	535	8.29e-152	446
MS.gene047977.t1	AT1G30720	45.525	514	272	6	17	527	16	524	1.47e-151	445
MS.gene047977.t1	AT1G26400	43.551	535	289	7	1	531	1	526	2.03e-149	439
MS.gene047977.t1	AT1G26410	43.849	504	276	6	30	531	53	551	3.64e-146	432
MS.gene047977.t1	AT2G34810	44.767	516	272	8	23	529	28	539	7.96e-145	428

Find 102 sgRNAs with CRISPR-Local

Find 123 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGCACAAAATCTAAGGTATT+TGG	0.215393	2.4:+58689348	MS.gene047977:CDS
TGCATCTTGTTCTAAGCTTT+TGG	0.224617	2.4:-58689935	None:intergenic
AAGATAGTCCTTTGATGATT+TGG	0.231971	2.4:+58690352	MS.gene047977:CDS
TATTCTTGATAGAAAATCTA+TGG	0.264794	2.4:+58689798	MS.gene047977:CDS
GCTTTATACAAGCATCTTCT+TGG	0.275991	2.4:+58690622	MS.gene047977:CDS
GTGAATATAAATTCAGGTTT+TGG	0.276315	2.4:-58689382	None:intergenic
AATCCTTGTAAACCGGTTTC+CGG	0.282366	2.4:-58690309	None:intergenic
AAATTCAGTATTTAACTCTT+TGG	0.286256	2.4:+58690451	MS.gene047977:CDS
CAAGCAAGATTGTTCATAAA+TGG	0.288571	2.4:+58689956	MS.gene047977:CDS
ATTCTTCAGCACAAAATCTA+AGG	0.299578	2.4:+58689341	MS.gene047977:CDS
AAACCGGTTTACAAGGATTA+TGG	0.299624	2.4:+58690313	MS.gene047977:CDS
GCTGGTCTTTGCACAAGTTT+AGG	0.303745	2.4:+58689670	MS.gene047977:CDS
GGTGGTGGAGGTGGAAGTTT+TGG	0.306896	2.4:+58689847	MS.gene047977:CDS
CTATCGGCGAAGTGTATTAT+AGG	0.306957	2.4:+58689614	MS.gene047977:CDS
AATATTTACATCGCGAAGTT+TGG	0.311836	2.4:-58689551	None:intergenic
TGTTTAGTCAAACCTAATTC+AGG	0.315729	2.4:-58690141	None:intergenic
ACTTCAGGTGGTGTATCATT+TGG	0.350972	2.4:-58690216	None:intergenic
AACTATAGAGATCTTGATTT+GGG	0.358282	2.4:+58690576	MS.gene047977:CDS
TGTAAACCGGTTTCCGGTAT+CGG	0.360690	2.4:-58690303	None:intergenic
AAATGCAAGAGATGGGAATA+AGG	0.364388	2.4:+58690777	MS.gene047977:CDS
TTTAGTTGCATAGTTGAAAC+TGG	0.369940	2.4:-58690747	None:intergenic
CTTTATACAAGCATCTTCTT+GGG	0.371318	2.4:+58690623	MS.gene047977:CDS
AAGGGTGTGAATATAAATTC+AGG	0.373832	2.4:-58689388	None:intergenic
TTGGACATGTGAATCGGTTA+AGG	0.375346	2.4:-58689407	None:intergenic
GGATCCATGATGAGAAAATA+TGG	0.381854	2.4:+58689724	MS.gene047977:CDS
AAATCTGTTCTGTATATTGC+AGG	0.384954	2.4:+58690189	MS.gene047977:CDS
GTTCCATTTCTATGAGGAAA+AGG	0.388022	2.4:-58690420	None:intergenic
GGTGTTGGTGGACACATAAC+AGG	0.389612	2.4:+58689691	MS.gene047977:CDS
GAACTATAGAGATCTTGATT+TGG	0.391233	2.4:+58690575	MS.gene047977:CDS
CATGAGAAAAGTGATGTTCA+TGG	0.393952	2.4:+58689640	MS.gene047977:CDS
GTGTAAATTGATGCATAAAA+TGG	0.398923	2.4:-58689286	None:intergenic
GATGTTCATGGTTTCCCTGC+TGG	0.402996	2.4:+58689652	MS.gene047977:CDS
CTTGGAAACTTAGACACATA+AGG	0.403563	2.4:-58690540	None:intergenic
TTGTTCATCATGCCACCATA+TGG	0.406387	2.4:-58690378	None:intergenic
CAAAGCATGTTGATTGGATC+AGG	0.408035	2.4:+58690496	MS.gene047977:CDS
AGGATTATGGCAAAGGTTGT+TGG	0.408844	2.4:+58690326	MS.gene047977:CDS
ATGCTTCAAAGCATGTTGAT+TGG	0.408891	2.4:+58690490	MS.gene047977:CDS
CAAAGATAATTTCAATAGGT+TGG	0.410828	2.4:+58690659	MS.gene047977:CDS
GCTATTAGAGGTGGTGGAGG+TGG	0.420433	2.4:+58689838	MS.gene047977:CDS
TTTCCTTCAAGCAAAACTTC+AGG	0.421604	2.4:-58690231	None:intergenic
TATTTAACTCTTTGGCAAGA+TGG	0.424710	2.4:+58690459	MS.gene047977:CDS
TTGAACAAGTAACAGCTACT+TGG	0.425622	2.4:-58689426	None:intergenic
CACATAACAGGAGGTGCATA+TGG	0.426699	2.4:+58689703	MS.gene047977:CDS
TGCTCAATTCCTAGGTGATT+CGG	0.429054	2.4:+58690086	MS.gene047977:CDS
AACTTTCCTTCATAACTTGA+AGG	0.432029	2.4:-58690116	None:intergenic
ATTTCAAAGATAATTTCAAT+AGG	0.435565	2.4:+58690655	MS.gene047977:CDS
ATACCGGAAACCGGTTTACA+AGG	0.436500	2.4:+58690306	MS.gene047977:CDS
ATCATTACCAAGTTCATACT+TGG	0.455337	2.4:+58689165	MS.gene047977:CDS
TTGCCATAATCCTTGTAAAC+CGG	0.455650	2.4:-58690316	None:intergenic
TGGATCCTGAAAATGTGTTC+AGG	0.457657	2.4:+58690700	MS.gene047977:CDS
TCTTACAATGCTCAATTCCT+AGG	0.460457	2.4:+58690078	MS.gene047977:CDS
TGGGCTATTAGAGGTGGTGG+AGG	0.463852	2.4:+58689835	MS.gene047977:CDS
TGGACATGTGAATCGGTTAA+GGG	0.464063	2.4:-58689406	None:intergenic
TTGTTTGCAGCACTAGCAGC+TGG	0.472836	2.4:-58690033	None:intergenic
ATGATGAGAAAATATGGTCT+TGG	0.474676	2.4:+58689730	MS.gene047977:CDS
AGAGAGCCGATACCGGAAAC+CGG	0.475333	2.4:+58690297	MS.gene047977:CDS
TAAAGTGTTCCATTTCTATG+AGG	0.485254	2.4:-58690426	None:intergenic
TTGATGATTTGGAATCCATA+TGG	0.487109	2.4:+58690363	MS.gene047977:CDS
GTTACTTGTTCAAAGAAACT+TGG	0.495838	2.4:+58689436	MS.gene047977:CDS
AAACTTGTGCAAAGACCAGC+AGG	0.496208	2.4:-58689667	None:intergenic
GCGAAAATAGTTGACGCAAA+CGG	0.496323	2.4:+58689772	MS.gene047977:CDS
AAAATTGCCAAGTATGAACT+TGG	0.499229	2.4:-58689172	None:intergenic
AAGATTGCATGGAAACTAGC+TGG	0.499960	2.4:+58690163	MS.gene047977:CDS
TGCACAAGTTTAGGTGTTGG+TGG	0.501953	2.4:+58689679	MS.gene047977:CDS
TAGTTCACATATGCTTCCCT+TGG	0.502365	2.4:-58690558	None:intergenic
TTCCATTTCTATGAGGAAAA+GGG	0.503219	2.4:-58690419	None:intergenic
AAGACAAGAAATGCAAGAGA+TGG	0.506067	2.4:+58690769	MS.gene047977:CDS
CTGAATAGAAGCTTAGACAT+TGG	0.507164	2.4:-58689252	None:intergenic
GAAACTCCTTCAAGTTATGA+AGG	0.509883	2.4:+58690110	MS.gene047977:CDS
ATTCTTGATAGAAAATCTAT+GGG	0.512123	2.4:+58689799	MS.gene047977:CDS
TTGGAAACTTAGACACATAA+GGG	0.512402	2.4:-58690539	None:intergenic
TTTCGTAAGAGAGCCGATAC+CGG	0.516871	2.4:+58690290	MS.gene047977:CDS
AGCTACTTGGACATGTGAAT+CGG	0.521216	2.4:-58689413	None:intergenic
TTAATGAAATTGATATCAAG+AGG	0.521425	2.4:-58689198	None:intergenic
ACGAGAGTCCTTCATAATCA+TGG	0.524388	2.4:-58689486	None:intergenic
TTTGACTAAACAAGATTGCA+TGG	0.524509	2.4:+58690152	MS.gene047977:CDS
GGTGAAAATTAAGACTAAAG+TGG	0.529045	2.4:+58690680	MS.gene047977:CDS
CTTTGCACAAGTTTAGGTGT+TGG	0.529715	2.4:+58689676	MS.gene047977:CDS
CTTATGTGTCTAAGTTTCCA+AGG	0.533668	2.4:+58690541	MS.gene047977:CDS
ATATCGAAGATAATAGCGCT+TGG	0.537173	2.4:+58689575	MS.gene047977:CDS
GTTTACAAGGATTATGGCAA+AGG	0.546077	2.4:+58690319	MS.gene047977:CDS
CCTTCAAGCAAAACTTCAGG+TGG	0.556110	2.4:-58690228	None:intergenic
AGACAAGAAATGCAAGAGAT+GGG	0.558462	2.4:+58690770	MS.gene047977:CDS
ATTCAAGCCGGTGCTACTAT+CGG	0.565892	2.4:+58689598	MS.gene047977:CDS
TTTATACAAGCATCTTCTTG+GGG	0.579151	2.4:+58690624	MS.gene047977:CDS
CACTTCGCCGATAGTAGCAC+CGG	0.580226	2.4:-58689605	None:intergenic
TTACATCGCGAAGTTTGGCT+AGG	0.581305	2.4:-58689546	None:intergenic
CATCTAAGAGTTAGAAGTGG+TGG	0.586392	2.4:+58689463	MS.gene047977:CDS
TATGGATTCCAAATCATCAA+AGG	0.588783	2.4:-58690360	None:intergenic
AGTGGTGGCCATGATTATGA+AGG	0.592283	2.4:+58689478	MS.gene047977:CDS
TTATGTGTCTAAGTTTCCAA+GGG	0.606472	2.4:+58690542	MS.gene047977:CDS
GCTAGGTCGACGATTATGAA+AGG	0.615520	2.4:-58689529	None:intergenic
TGCATAGTTGAAACTGGAAG+TGG	0.634647	2.4:-58690741	None:intergenic
GGAGTTTCTCCGAATCACCT+AGG	0.652162	2.4:-58690095	None:intergenic
ATGATTTGGAATCCATATGG+TGG	0.656424	2.4:+58690366	MS.gene047977:CDS
AATAGCGCTTGGATTCAAGC+CGG	0.660237	2.4:+58689586	MS.gene047977:CDS
ATTCATCTAAGAGTTAGAAG+TGG	0.668072	2.4:+58689460	MS.gene047977:CDS
TTCTTGATAGAAAATCTATG+GGG	0.690602	2.4:+58689800	MS.gene047977:CDS
ATAGTTGAAACTGGAAGTGG+TGG	0.697983	2.4:-58690738	None:intergenic
TCTTGATAGAAAATCTATGG+GGG	0.706423	2.4:+58689801	MS.gene047977:CDS
GTTGGTGGACACATAACAGG+AGG	0.719255	2.4:+58689694	MS.gene047977:CDS
AACTTGTGCAAAGACCAGCA+GGG	0.736490	2.4:-58689666	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTTCAAAGATAATTTCAAT+AGG	+	chr2.4:58690655-58690674	MS.gene047977:CDS	15.0%
!!	AAATTCAGTATTTAACTCTT+TGG	+	chr2.4:58690451-58690470	MS.gene047977:CDS	20.0%
!!	ATTCTTGATAGAAAATCTAT+GGG	+	chr2.4:58689799-58689818	MS.gene047977:CDS	20.0%
!!	TATTCTTGATAGAAAATCTA+TGG	+	chr2.4:58689798-58689817	MS.gene047977:CDS	20.0%
!!	TTAATGAAATTGATATCAAG+AGG	-	chr2.4:58689201-58689220	None:intergenic	20.0%
!	AACTATAGAGATCTTGATTT+GGG	+	chr2.4:58690576-58690595	MS.gene047977:CDS	25.0%
!	CAAAGATAATTTCAATAGGT+TGG	+	chr2.4:58690659-58690678	MS.gene047977:CDS	25.0%
!	GTGTAAATTGATGCATAAAA+TGG	-	chr2.4:58689289-58689308	None:intergenic	25.0%
!	TTCTTGATAGAAAATCTATG+GGG	+	chr2.4:58689800-58689819	MS.gene047977:CDS	25.0%
!!	AAGAGATTTTCATCAATAGT+TGG	-	chr2.4:58689994-58690013	None:intergenic	25.0%
!!!	GTGAATATAAATTCAGGTTT+TGG	-	chr2.4:58689385-58689404	None:intergenic	25.0%
	AAAATTGCCAAGTATGAACT+TGG	-	chr2.4:58689175-58689194	None:intergenic	30.0%
	AAATCTGTTCTGTATATTGC+AGG	+	chr2.4:58690189-58690208	MS.gene047977:CDS	30.0%
	AACTTTCCTTCATAACTTGA+AGG	-	chr2.4:58690119-58690138	None:intergenic	30.0%
	AATATTTACATCGCGAAGTT+TGG	-	chr2.4:58689554-58689573	None:intergenic	30.0%
	ATCATTACCAAGTTCATACT+TGG	+	chr2.4:58689165-58689184	MS.gene047977:CDS	30.0%
	ATGATGAGAAAATATGGTCT+TGG	+	chr2.4:58689730-58689749	MS.gene047977:CDS	30.0%
	ATTCATCTAAGAGTTAGAAG+TGG	+	chr2.4:58689460-58689479	MS.gene047977:CDS	30.0%
	ATTCTTCAGCACAAAATCTA+AGG	+	chr2.4:58689341-58689360	MS.gene047977:CDS	30.0%
	CAAGCAAGATTGTTCATAAA+TGG	+	chr2.4:58689956-58689975	MS.gene047977:CDS	30.0%
	CTTTATACAAGCATCTTCTT+GGG	+	chr2.4:58690623-58690642	MS.gene047977:CDS	30.0%
	GAACTATAGAGATCTTGATT+TGG	+	chr2.4:58690575-58690594	MS.gene047977:CDS	30.0%
	GGTGAAAATTAAGACTAAAG+TGG	+	chr2.4:58690680-58690699	MS.gene047977:CDS	30.0%
	GTTACTTGTTCAAAGAAACT+TGG	+	chr2.4:58689436-58689455	MS.gene047977:CDS	30.0%
	TATGGATTCCAAATCATCAA+AGG	-	chr2.4:58690363-58690382	None:intergenic	30.0%
	TATTTAACTCTTTGGCAAGA+TGG	+	chr2.4:58690459-58690478	MS.gene047977:CDS	30.0%
	TCTTGATAGAAAATCTATGG+GGG	+	chr2.4:58689801-58689820	MS.gene047977:CDS	30.0%
	TGTTTAGTCAAACCTAATTC+AGG	-	chr2.4:58690144-58690163	None:intergenic	30.0%
	TTATGTGTCTAAGTTTCCAA+GGG	+	chr2.4:58690542-58690561	MS.gene047977:CDS	30.0%
	TTCCATTTCTATGAGGAAAA+GGG	-	chr2.4:58690422-58690441	None:intergenic	30.0%
	TTGGAAACTTAGACACATAA+GGG	-	chr2.4:58690542-58690561	None:intergenic	30.0%
	TTTAGTTGCATAGTTGAAAC+TGG	-	chr2.4:58690750-58690769	None:intergenic	30.0%
	TTTATACAAGCATCTTCTTG+GGG	+	chr2.4:58690624-58690643	MS.gene047977:CDS	30.0%
	TTTGACTAAACAAGATTGCA+TGG	+	chr2.4:58690152-58690171	MS.gene047977:CDS	30.0%
!	AAGACCATATTTTCTCATCA+TGG	-	chr2.4:58689731-58689750	None:intergenic	30.0%
!	AAGATAGTCCTTTGATGATT+TGG	+	chr2.4:58690352-58690371	MS.gene047977:CDS	30.0%
!	AAGGAAAGTTTTCCTGAATT+AGG	+	chr2.4:58690129-58690148	MS.gene047977:CDS	30.0%
!	AAGGGTGTGAATATAAATTC+AGG	-	chr2.4:58689391-58689410	None:intergenic	30.0%
!	AGCACAAAATCTAAGGTATT+TGG	+	chr2.4:58689348-58689367	MS.gene047977:CDS	30.0%
!	GATTTTGTGCTGAAGAATTA+AGG	-	chr2.4:58689339-58689358	None:intergenic	30.0%
!	TAAAGTGTTCCATTTCTATG+AGG	-	chr2.4:58690429-58690448	None:intergenic	30.0%
!	TGGCATGATGAACAATTTTT+CGG	+	chr2.4:58690386-58690405	MS.gene047977:CDS	30.0%
!	TTGATGATTTGGAATCCATA+TGG	+	chr2.4:58690363-58690382	MS.gene047977:CDS	30.0%
!!	GAAGTTTTGGTATTCTTCTT+TGG	+	chr2.4:58689860-58689879	MS.gene047977:CDS	30.0%
!!	TTGTTCTAAGCTTTTGGTAA+CGG	-	chr2.4:58689932-58689951	None:intergenic	30.0%
	AAGACAAGAAATGCAAGAGA+TGG	+	chr2.4:58690769-58690788	MS.gene047977:CDS	35.0%
	AGACAAGAAATGCAAGAGAT+GGG	+	chr2.4:58690770-58690789	MS.gene047977:CDS	35.0%
	ATATCGAAGATAATAGCGCT+TGG	+	chr2.4:58689575-58689594	MS.gene047977:CDS	35.0%
	ATGCTTCAAAGCATGTTGAT+TGG	+	chr2.4:58690490-58690509	MS.gene047977:CDS	35.0%
	CATGAGAAAAGTGATGTTCA+TGG	+	chr2.4:58689640-58689659	MS.gene047977:CDS	35.0%
	CTGAATAGAAGCTTAGACAT+TGG	-	chr2.4:58689255-58689274	None:intergenic	35.0%
	CTTATGTGTCTAAGTTTCCA+AGG	+	chr2.4:58690541-58690560	MS.gene047977:CDS	35.0%
	CTTGGAAACTTAGACACATA+AGG	-	chr2.4:58690543-58690562	None:intergenic	35.0%
	GCTTTATACAAGCATCTTCT+TGG	+	chr2.4:58690622-58690641	MS.gene047977:CDS	35.0%
	GGATCCATGATGAGAAAATA+TGG	+	chr2.4:58689724-58689743	MS.gene047977:CDS	35.0%
	GTTCCATTTCTATGAGGAAA+AGG	-	chr2.4:58690423-58690442	None:intergenic	35.0%
	GTTTACAAGGATTATGGCAA+AGG	+	chr2.4:58690319-58690338	MS.gene047977:CDS	35.0%
	TCTTACAATGCTCAATTCCT+AGG	+	chr2.4:58690078-58690097	MS.gene047977:CDS	35.0%
	TTGAACAAGTAACAGCTACT+TGG	-	chr2.4:58689429-58689448	None:intergenic	35.0%
	TTGCCATAATCCTTGTAAAC+CGG	-	chr2.4:58690319-58690338	None:intergenic	35.0%
	TTTCCTTCAAGCAAAACTTC+AGG	-	chr2.4:58690234-58690253	None:intergenic	35.0%
!	AAACCGGTTTACAAGGATTA+TGG	+	chr2.4:58690313-58690332	MS.gene047977:CDS	35.0%
!	ATCCCTTTTCCTCATAGAAA+TGG	+	chr2.4:58690417-58690436	MS.gene047977:CDS	35.0%
!	ATGATTTGGAATCCATATGG+TGG	+	chr2.4:58690366-58690385	MS.gene047977:CDS	35.0%
!	GAAACTCCTTCAAGTTATGA+AGG	+	chr2.4:58690110-58690129	MS.gene047977:CDS	35.0%
!	GAATTCTTTTGGGCTATTAG+AGG	+	chr2.4:58689826-58689845	MS.gene047977:CDS	35.0%
!!	GTTTTGGTATTCTTCTTTGG+TGG	+	chr2.4:58689863-58689882	MS.gene047977:CDS	35.0%
!!	TGCATCTTGTTCTAAGCTTT+TGG	-	chr2.4:58689938-58689957	None:intergenic	35.0%
	AAGATTGCATGGAAACTAGC+TGG	+	chr2.4:58690163-58690182	MS.gene047977:CDS	40.0%
	ACGAGAGTCCTTCATAATCA+TGG	-	chr2.4:58689489-58689508	None:intergenic	40.0%
	ACTTCAGGTGGTGTATCATT+TGG	-	chr2.4:58690219-58690238	None:intergenic	40.0%
	AGCTACTTGGACATGTGAAT+CGG	-	chr2.4:58689416-58689435	None:intergenic	40.0%
	AGGATTATGGCAAAGGTTGT+TGG	+	chr2.4:58690326-58690345	MS.gene047977:CDS	40.0%
	ATAGTTGAAACTGGAAGTGG+TGG	-	chr2.4:58690741-58690760	None:intergenic	40.0%
	CATCTAAGAGTTAGAAGTGG+TGG	+	chr2.4:58689463-58689482	MS.gene047977:CDS	40.0%
	CTATCGGCGAAGTGTATTAT+AGG	+	chr2.4:58689614-58689633	MS.gene047977:CDS	40.0%
	CTTTGCACAAGTTTAGGTGT+TGG	+	chr2.4:58689676-58689695	MS.gene047977:CDS	40.0%
	GCGAAAATAGTTGACGCAAA+CGG	+	chr2.4:58689772-58689791	MS.gene047977:CDS	40.0%
	TAGTTCACATATGCTTCCCT+TGG	-	chr2.4:58690561-58690580	None:intergenic	40.0%
	TGATAGAAAATCTATGGGGG+AGG	+	chr2.4:58689804-58689823	MS.gene047977:CDS	40.0%
	TGCATAGTTGAAACTGGAAG+TGG	-	chr2.4:58690744-58690763	None:intergenic	40.0%
	TGCTCAATTCCTAGGTGATT+CGG	+	chr2.4:58690086-58690105	MS.gene047977:CDS	40.0%
	TGGACATGTGAATCGGTTAA+GGG	-	chr2.4:58689409-58689428	None:intergenic	40.0%
	TGGATCCTGAAAATGTGTTC+AGG	+	chr2.4:58690700-58690719	MS.gene047977:CDS	40.0%
	TTGGACATGTGAATCGGTTA+AGG	-	chr2.4:58689410-58689429	None:intergenic	40.0%
	TTGTTCATCATGCCACCATA+TGG	-	chr2.4:58690381-58690400	None:intergenic	40.0%
!	AATCCTTGTAAACCGGTTTC+CGG	-	chr2.4:58690312-58690331	None:intergenic	40.0%
!	CAAAGCATGTTGATTGGATC+AGG	+	chr2.4:58690496-58690515	MS.gene047977:CDS	40.0%
!	GTAAAAACCGTCACGGTTTT+TGG	-	chr2.4:58689910-58689929	None:intergenic	40.0%
!	TATGGGGGAGGAATTCTTTT+GGG	+	chr2.4:58689816-58689835	MS.gene047977:CDS	40.0%
!	TCATGCCTGAACACATTTTC+AGG	-	chr2.4:58690708-58690727	None:intergenic	40.0%
!	TTCTTTTGGGCTATTAGAGG+TGG	+	chr2.4:58689829-58689848	MS.gene047977:CDS	40.0%
!!!	AATTCAGGTTTTGGAGCTGA+AGG	-	chr2.4:58689376-58689395	None:intergenic	40.0%
	AAACTTGTGCAAAGACCAGC+AGG	-	chr2.4:58689670-58689689	None:intergenic	45.0%
	AACTTGTGCAAAGACCAGCA+GGG	-	chr2.4:58689669-58689688	None:intergenic	45.0%
	AATAGCGCTTGGATTCAAGC+CGG	+	chr2.4:58689586-58689605	MS.gene047977:CDS	45.0%
	AGTGGTGGCCATGATTATGA+AGG	+	chr2.4:58689478-58689497	MS.gene047977:CDS	45.0%
	CCTTCAAGCAAAACTTCAGG+TGG	-	chr2.4:58690231-58690250	None:intergenic	45.0%
	GCTAGGTCGACGATTATGAA+AGG	-	chr2.4:58689532-58689551	None:intergenic	45.0%
	TCCTGTTCCAAAAACCGTGA+CGG	+	chr2.4:58689900-58689919	MS.gene047977:CDS	45.0%
	TTACATCGCGAAGTTTGGCT+AGG	-	chr2.4:58689549-58689568	None:intergenic	45.0%
	TTTCGTAAGAGAGCCGATAC+CGG	+	chr2.4:58690290-58690309	MS.gene047977:CDS	45.0%
!	ATACCGGAAACCGGTTTACA+AGG	+	chr2.4:58690306-58690325	MS.gene047977:CDS	45.0%
!	CACATAACAGGAGGTGCATA+TGG	+	chr2.4:58689703-58689722	MS.gene047977:CDS	45.0%
!	CCACCTGAAGTTTTGCTTGA+AGG	+	chr2.4:58690228-58690247	MS.gene047977:CDS	45.0%
!	CTATGGGGGAGGAATTCTTT+TGG	+	chr2.4:58689815-58689834	MS.gene047977:CDS	45.0%
!	GGTAACGGTAAAAACCGTCA+CGG	-	chr2.4:58689917-58689936	None:intergenic	45.0%
!	TGTAAACCGGTTTCCGGTAT+CGG	-	chr2.4:58690306-58690325	None:intergenic	45.0%
!	TTTTGGGCTATTAGAGGTGG+TGG	+	chr2.4:58689832-58689851	MS.gene047977:CDS	45.0%
!!	ATTCAAGCCGGTGCTACTAT+CGG	+	chr2.4:58689598-58689617	MS.gene047977:CDS	45.0%
!!	GCTGGTCTTTGCACAAGTTT+AGG	+	chr2.4:58689670-58689689	MS.gene047977:CDS	45.0%
!!	TGCACAAGTTTAGGTGTTGG+TGG	+	chr2.4:58689679-58689698	MS.gene047977:CDS	45.0%
	GATGTTCATGGTTTCCCTGC+TGG	+	chr2.4:58689652-58689671	MS.gene047977:CDS	50.0%
	GGAGTTTCTCCGAATCACCT+AGG	-	chr2.4:58690098-58690117	None:intergenic	50.0%
	TTGTTTGCAGCACTAGCAGC+TGG	-	chr2.4:58690036-58690055	None:intergenic	50.0%
!	GTTGGTGGACACATAACAGG+AGG	+	chr2.4:58689694-58689713	MS.gene047977:CDS	50.0%
!!	GGTGTTGGTGGACACATAAC+AGG	+	chr2.4:58689691-58689710	MS.gene047977:CDS	50.0%
!!!	ACCGTCACGGTTTTTGGAAC+AGG	-	chr2.4:58689904-58689923	None:intergenic	50.0%
	AGAGAGCCGATACCGGAAAC+CGG	+	chr2.4:58690297-58690316	MS.gene047977:CDS	55.0%
	CACTTCGCCGATAGTAGCAC+CGG	-	chr2.4:58689608-58689627	None:intergenic	55.0%
!	TGGGCTATTAGAGGTGGTGG+AGG	+	chr2.4:58689835-58689854	MS.gene047977:CDS	55.0%
!!	GCTATTAGAGGTGGTGGAGG+TGG	+	chr2.4:58689838-58689857	MS.gene047977:CDS	55.0%
!!!	GGTGGTGGAGGTGGAAGTTT+TGG	+	chr2.4:58689847-58689866	MS.gene047977:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.4	gene	58689160	58690797	58689160	ID=MS.gene047977
chr2.4	mRNA	58689160	58690797	58689160	ID=MS.gene047977.t1;Parent=MS.gene047977
chr2.4	exon	58689160	58690797	58689160	ID=MS.gene047977.t1.exon1;Parent=MS.gene047977.t1
chr2.4	CDS	58689160	58690797	58689160	ID=cds.MS.gene047977.t1;Parent=MS.gene047977.t1

Gene Sequence

>MS.gene047977

ATGAAATCATTACCAAGTTCATACTTGGCAATTTTAATCCTCTTGATATCAATTTCATTAACAAAATCAGCTTCAATTGAAGAAAACTTTGTCCAATGTCTAAGCTTCTATTCAGACAAAGCAGCACCATTTTATGCATCAATTTACACACAAAACAATGCTTCATTTAACAACATCCTTAATTCTTCAGCACAAAATCTAAGGTATTTGGTACCTTCAGCTCCAAAACCTGAATTTATATTCACACCCTTAACCGATTCACATGTCCAAGTAGCTGTTACTTGTTCAAAGAAACTTGGTATTCATCTAAGAGTTAGAAGTGGTGGCCATGATTATGAAGGACTCTCGTATGTTTCTGAAATTGAAACGCCTTTCATAATCGTCGACCTAGCCAAACTTCGCGATGTAAATATTGATATCGAAGATAATAGCGCTTGGATTCAAGCCGGTGCTACTATCGGCGAAGTGTATTATAGGATACATGAGAAAAGTGATGTTCATGGTTTCCCTGCTGGTCTTTGCACAAGTTTAGGTGTTGGTGGACACATAACAGGAGGTGCATATGGATCCATGATGAGAAAATATGGTCTTGGAGCTGATAACGTTCTCGATGCGAAAATAGTTGACGCAAACGGCAATATTCTTGATAGAAAATCTATGGGGGAGGAATTCTTTTGGGCTATTAGAGGTGGTGGAGGTGGAAGTTTTGGTATTCTTCTTTGGTGGAAAATTAAGCTTGTTCCTGTTCCAAAAACCGTGACGGTTTTTACCGTTACCAAAAGCTTAGAACAAGATGCAAGCAAGATTGTTCATAAATGGCAAGAAGTAGCACCAACTATTGATGAAAATCTCTTTATGAGAGTTATCATTCAACCAGCTGCTAGTGCTGCAAACAAAACTCAAAGAACTATTACTACTTCTTACAATGCTCAATTCCTAGGTGATTCGGAGAAACTCCTTCAAGTTATGAAGGAAAGTTTTCCTGAATTAGGTTTGACTAAACAAGATTGCATGGAAACTAGCTGGATCAAATCTGTTCTGTATATTGCAGGCTATCCAAATGATACACCACCTGAAGTTTTGCTTGAAGGAAAATCAACATTCAAGAATTACTTCAAAGCAAAGTCAGATTTCGTAAGAGAGCCGATACCGGAAACCGGTTTACAAGGATTATGGCAAAGGTTGTTGGAAGAAGATAGTCCTTTGATGATTTGGAATCCATATGGTGGCATGATGAACAATTTTTCGGAATCTGATATCCCTTTTCCTCATAGAAATGGAACACTTTACAAAATTCAGTATTTAACTCTTTGGCAAGATGGAGACAAGAATGCTTCAAAGCATGTTGATTGGATCAGGAAGCTTTATAACTACATGATCCCTTATGTGTCTAAGTTTCCAAGGGAAGCATATGTGAACTATAGAGATCTTGATTTGGGAATGAATAAGAAGAATAGTACAAGCTTTATACAAGCATCTTCTTGGGGTAACATGTATTTCAAAGATAATTTCAATAGGTTGGTGAAAATTAAGACTAAAGTGGATCCTGAAAATGTGTTCAGGCATGAGCAAAGTATTCCACCACTTCCAGTTTCAACTATGCAACTAAAAGACAAGAAATGCAAGAGATGGGAATAA

Protein sequence

>MS.gene047977.t1

MKSLPSSYLAILILLISISLTKSASIEENFVQCLSFYSDKAAPFYASIYTQNNASFNNILNSSAQNLRYLVPSAPKPEFIFTPLTDSHVQVAVTCSKKLGIHLRVRSGGHDYEGLSYVSEIETPFIIVDLAKLRDVNIDIEDNSAWIQAGATIGEVYYRIHEKSDVHGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVLDAKIVDANGNILDRKSMGEEFFWAIRGGGGGSFGILLWWKIKLVPVPKTVTVFTVTKSLEQDASKIVHKWQEVAPTIDENLFMRVIIQPAASAANKTQRTITTSYNAQFLGDSEKLLQVMKESFPELGLTKQDCMETSWIKSVLYIAGYPNDTPPEVLLEGKSTFKNYFKAKSDFVREPIPETGLQGLWQRLLEEDSPLMIWNPYGGMMNNFSESDIPFPHRNGTLYKIQYLTLWQDGDKNASKHVDWIRKLYNYMIPYVSKFPREAYVNYRDLDLGMNKKNSTSFIQASSWGNMYFKDNFNRLVKIKTKVDPENVFRHEQSIPPLPVSTMQLKDKKCKRWE