Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59218.t1 | XP_024642059.1 | 99.3 | 431 | 3 | 0 | 1 | 431 | 1 | 431 | 6.80E-252 | 879.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59218.t1 | Q75HX5 | 74.0 | 450 | 93 | 6 | 1 | 431 | 1 | 445 | 8.9e-184 | 644.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59218.t1 | G7ICY3 | 99.3 | 431 | 3 | 0 | 1 | 431 | 1 | 431 | 4.9e-252 | 879.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene59218.t1 | TF | TUB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene59218 | -0.822752 | 2.00E-53 | -1.69E-46 |
| MS.gene049297 | MS.gene59218 | -0.847122 | 1.41E-59 | -1.69E-46 |
| MS.gene04933 | MS.gene59218 | -0.8055 | 1.30E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene59218 | -0.86358 | 2.25E-64 | -1.69E-46 |
| MS.gene049491 | MS.gene59218 | -0.803958 | 2.72E-49 | -1.69E-46 |
| MS.gene049599 | MS.gene59218 | 0.810812 | 9.57E-51 | -1.69E-46 |
| MS.gene049758 | MS.gene59218 | -0.877296 | 7.04E-69 | -1.69E-46 |
| MS.gene049910 | MS.gene59218 | -0.809665 | 1.69E-50 | -1.69E-46 |
| MS.gene050076 | MS.gene59218 | -0.831681 | 1.45E-55 | -1.69E-46 |
| MS.gene050099 | MS.gene59218 | -0.845123 | 4.94E-59 | -1.69E-46 |
| MS.gene050227 | MS.gene59218 | -0.805921 | 1.06E-49 | -1.69E-46 |
| MS.gene050231 | MS.gene59218 | -0.820119 | 8.12E-53 | -1.69E-46 |
| MS.gene050301 | MS.gene59218 | -0.871404 | 7.01E-67 | -1.69E-46 |
| MS.gene050319 | MS.gene59218 | 0.821129 | 4.76E-53 | -1.69E-46 |
| MS.gene050330 | MS.gene59218 | 0.84181 | 3.79E-58 | -1.69E-46 |
| MS.gene050335 | MS.gene59218 | 0.805481 | 1.31E-49 | -1.69E-46 |
| MS.gene050397 | MS.gene59218 | -0.825975 | 3.50E-54 | -1.69E-46 |
| MS.gene050464 | MS.gene59218 | -0.811584 | 6.51E-51 | -1.69E-46 |
| MS.gene050529 | MS.gene59218 | -0.821762 | 3.40E-53 | -1.69E-46 |
| MS.gene050558 | MS.gene59218 | -0.828579 | 8.31E-55 | -1.69E-46 |
| MS.gene050623 | MS.gene59218 | 0.81945 | 1.15E-52 | -1.69E-46 |
| MS.gene050642 | MS.gene59218 | -0.847458 | 1.14E-59 | -1.69E-46 |
| MS.gene05101 | MS.gene59218 | -0.843314 | 1.51E-58 | -1.69E-46 |
| MS.gene05119 | MS.gene59218 | 0.829991 | 3.78E-55 | -1.69E-46 |
| MS.gene051257 | MS.gene59218 | -0.818689 | 1.72E-52 | -1.69E-46 |
| MS.gene051471 | MS.gene59218 | -0.850042 | 2.19E-60 | -1.69E-46 |
| MS.gene051582 | MS.gene59218 | -0.835308 | 1.81E-56 | -1.69E-46 |
| MS.gene051662 | MS.gene59218 | -0.845727 | 3.39E-59 | -1.69E-46 |
| MS.gene051663 | MS.gene59218 | -0.829085 | 6.27E-55 | -1.69E-46 |
| MS.gene051860 | MS.gene59218 | -0.84131 | 5.13E-58 | -1.69E-46 |
| MS.gene051983 | MS.gene59218 | -0.831176 | 1.94E-55 | -1.69E-46 |
| MS.gene052011 | MS.gene59218 | 0.818316 | 2.09E-52 | -1.69E-46 |
| MS.gene052078 | MS.gene59218 | -0.876537 | 1.29E-68 | -1.69E-46 |
| MS.gene052178 | MS.gene59218 | -0.839346 | 1.67E-57 | -1.69E-46 |
| MS.gene052188 | MS.gene59218 | -0.80695 | 6.41E-50 | -1.69E-46 |
| MS.gene052207 | MS.gene59218 | -0.813835 | 2.09E-51 | -1.69E-46 |
| MS.gene052253 | MS.gene59218 | -0.821073 | 4.90E-53 | -1.69E-46 |
| MS.gene052309 | MS.gene59218 | 0.81337 | 2.65E-51 | -1.69E-46 |
| MS.gene052310 | MS.gene59218 | -0.820245 | 7.59E-53 | -1.69E-46 |
| MS.gene052326 | MS.gene59218 | -0.828575 | 8.33E-55 | -1.69E-46 |
| MS.gene052340 | MS.gene59218 | -0.822858 | 1.89E-53 | -1.69E-46 |
| MS.gene052344 | MS.gene59218 | 0.807807 | 4.22E-50 | -1.69E-46 |
| MS.gene052600 | MS.gene59218 | -0.810948 | 8.94E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene59218 | -0.823451 | 1.38E-53 | -1.69E-46 |
| MS.gene053557 | MS.gene59218 | -0.819678 | 1.02E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene59218 | -0.897942 | 8.61E-77 | -1.69E-46 |
| MS.gene053907 | MS.gene59218 | -0.836801 | 7.56E-57 | -1.69E-46 |
| MS.gene053971 | MS.gene59218 | -0.818175 | 2.25E-52 | -1.69E-46 |
| MS.gene054011 | MS.gene59218 | -0.813348 | 2.68E-51 | -1.69E-46 |
| MS.gene054012 | MS.gene59218 | -0.801332 | 9.47E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene59218 | -0.865334 | 6.37E-65 | -1.69E-46 |
| MS.gene054942 | MS.gene59218 | -0.859361 | 4.36E-63 | -1.69E-46 |
| MS.gene054983 | MS.gene59218 | -0.820523 | 6.56E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene59218 | -0.883721 | 3.53E-71 | -1.69E-46 |
| MS.gene055303 | MS.gene59218 | -0.804495 | 2.10E-49 | -1.69E-46 |
| MS.gene055390 | MS.gene59218 | -0.832119 | 1.13E-55 | -1.69E-46 |
| MS.gene055422 | MS.gene59218 | -0.893222 | 7.68E-75 | -1.69E-46 |
| MS.gene055428 | MS.gene59218 | -0.902909 | 5.99E-79 | -1.69E-46 |
| MS.gene05553 | MS.gene59218 | -0.804908 | 1.72E-49 | -1.69E-46 |
| MS.gene055604 | MS.gene59218 | -0.81988 | 9.20E-53 | -1.69E-46 |
| MS.gene055712 | MS.gene59218 | -0.828392 | 9.22E-55 | -1.69E-46 |
| MS.gene056069 | MS.gene59218 | 0.813395 | 2.62E-51 | -1.69E-46 |
| MS.gene056314 | MS.gene59218 | -0.825707 | 4.05E-54 | -1.69E-46 |
| MS.gene056407 | MS.gene59218 | -0.828915 | 6.89E-55 | -1.69E-46 |
| MS.gene056612 | MS.gene59218 | -0.840303 | 9.43E-58 | -1.69E-46 |
| MS.gene056796 | MS.gene59218 | -0.816202 | 6.25E-52 | -1.69E-46 |
| MS.gene056899 | MS.gene59218 | 0.806948 | 6.42E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene59218 | -0.833221 | 6.04E-56 | -1.69E-46 |
| MS.gene05702 | MS.gene59218 | -0.841417 | 4.81E-58 | -1.69E-46 |
| MS.gene057121 | MS.gene59218 | -0.86305 | 3.28E-64 | -1.69E-46 |
| MS.gene057245 | MS.gene59218 | -0.849732 | 2.68E-60 | -1.69E-46 |
| MS.gene057439 | MS.gene59218 | -0.874499 | 6.44E-68 | -1.69E-46 |
| MS.gene057469 | MS.gene59218 | -0.82115 | 4.71E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene59218 | -0.859561 | 3.80E-63 | -1.69E-46 |
| MS.gene058082 | MS.gene59218 | -0.807309 | 5.38E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene59218 | -0.877852 | 4.51E-69 | -1.69E-46 |
| MS.gene058142 | MS.gene59218 | -0.836167 | 1.10E-56 | -1.69E-46 |
| MS.gene058233 | MS.gene59218 | -0.820474 | 6.73E-53 | -1.69E-46 |
| MS.gene058276 | MS.gene59218 | -0.84737 | 1.21E-59 | -1.69E-46 |
| MS.gene058293 | MS.gene59218 | -0.827143 | 1.84E-54 | -1.69E-46 |
| MS.gene058660 | MS.gene59218 | -0.842279 | 2.85E-58 | -1.69E-46 |
| MS.gene058710 | MS.gene59218 | -0.816956 | 4.23E-52 | -1.69E-46 |
| MS.gene05886 | MS.gene59218 | -0.834357 | 3.14E-56 | -1.69E-46 |
| MS.gene059033 | MS.gene59218 | 0.832328 | 1.01E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene59218 | -0.860479 | 2.01E-63 | -1.69E-46 |
| MS.gene059326 | MS.gene59218 | -0.814212 | 1.73E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene59218 | -0.886378 | 3.60E-72 | -1.69E-46 |
| MS.gene059597 | MS.gene59218 | -0.83469 | 2.59E-56 | -1.69E-46 |
| MS.gene059676 | MS.gene59218 | -0.82941 | 5.23E-55 | -1.69E-46 |
| MS.gene059688 | MS.gene59218 | -0.804457 | 2.14E-49 | -1.69E-46 |
| MS.gene059692 | MS.gene59218 | -0.822573 | 2.20E-53 | -1.69E-46 |
| MS.gene059695 | MS.gene59218 | -0.82061 | 6.26E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene59218 | -0.892925 | 1.01E-74 | -1.69E-46 |
| MS.gene059894 | MS.gene59218 | -0.870703 | 1.19E-66 | -1.69E-46 |
| MS.gene06037 | MS.gene59218 | -0.81251 | 4.09E-51 | -1.69E-46 |
| MS.gene060407 | MS.gene59218 | -0.815926 | 7.20E-52 | -1.69E-46 |
| MS.gene060476 | MS.gene59218 | -0.823678 | 1.22E-53 | -1.69E-46 |
| MS.gene060559 | MS.gene59218 | -0.80676 | 7.03E-50 | -1.69E-46 |
| MS.gene06090 | MS.gene59218 | -0.819151 | 1.35E-52 | -1.69E-46 |
| MS.gene060994 | MS.gene59218 | -0.802928 | 4.45E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene59218 | -0.866955 | 1.95E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59218.t1 | MTR_1g098790 | 99.304 | 431 | 3 | 0 | 1 | 431 | 1 | 431 | 0.0 | 894 |
| MS.gene59218.t1 | MTR_2g007930 | 80.460 | 435 | 73 | 5 | 1 | 431 | 1 | 427 | 0.0 | 703 |
| MS.gene59218.t1 | MTR_2g020280 | 58.073 | 384 | 137 | 5 | 48 | 431 | 34 | 393 | 1.38e-157 | 451 |
| MS.gene59218.t1 | MTR_5g020580 | 53.636 | 440 | 171 | 11 | 1 | 431 | 1 | 416 | 1.77e-154 | 444 |
| MS.gene59218.t1 | MTR_8g077195 | 51.708 | 439 | 177 | 12 | 1 | 431 | 1 | 412 | 9.05e-146 | 421 |
| MS.gene59218.t1 | MTR_1g022370 | 48.690 | 458 | 172 | 9 | 1 | 431 | 1 | 422 | 1.06e-145 | 421 |
| MS.gene59218.t1 | MTR_1g088960 | 50.801 | 437 | 174 | 10 | 1 | 431 | 1 | 402 | 6.86e-145 | 419 |
| MS.gene59218.t1 | MTR_2g020280 | 57.547 | 318 | 111 | 5 | 114 | 431 | 1 | 294 | 2.86e-125 | 365 |
| MS.gene59218.t1 | MTR_2g076200 | 47.781 | 383 | 149 | 6 | 50 | 431 | 39 | 371 | 1.12e-119 | 353 |
| MS.gene59218.t1 | MTR_2g076210 | 43.377 | 385 | 162 | 10 | 51 | 431 | 35 | 367 | 7.39e-96 | 292 |
| MS.gene59218.t1 | MTR_8g077675 | 42.431 | 436 | 198 | 15 | 1 | 424 | 1 | 395 | 2.04e-93 | 287 |
| MS.gene59218.t1 | MTR_8g077620 | 39.492 | 433 | 202 | 17 | 1 | 422 | 1 | 384 | 2.62e-90 | 279 |
| MS.gene59218.t1 | MTR_8g077650 | 38.601 | 386 | 156 | 16 | 48 | 423 | 14 | 328 | 1.44e-62 | 205 |
| MS.gene59218.t1 | MTR_1g023800 | 50.649 | 154 | 61 | 4 | 1 | 147 | 1 | 146 | 7.71e-44 | 150 |
| MS.gene59218.t1 | MTR_8g077640 | 38.783 | 263 | 122 | 6 | 1 | 235 | 46 | 297 | 9.24e-42 | 152 |
| MS.gene59218.t1 | MTR_8g077640 | 45.098 | 102 | 41 | 3 | 322 | 421 | 295 | 383 | 1.86e-16 | 81.3 |
| MS.gene59218.t1 | MTR_0210s0010 | 40.404 | 99 | 52 | 2 | 95 | 193 | 8 | 99 | 4.96e-14 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59218.t1 | AT1G76900 | 70.330 | 455 | 111 | 9 | 1 | 431 | 1 | 455 | 0.0 | 610 |
| MS.gene59218.t1 | AT1G76900 | 70.330 | 455 | 111 | 9 | 1 | 431 | 1 | 455 | 0.0 | 610 |
| MS.gene59218.t1 | AT1G76900 | 70.330 | 455 | 111 | 9 | 1 | 431 | 1 | 455 | 0.0 | 610 |
| MS.gene59218.t1 | AT1G43640 | 68.027 | 441 | 119 | 6 | 1 | 431 | 1 | 429 | 0.0 | 600 |
| MS.gene59218.t1 | AT1G25280 | 70.179 | 446 | 117 | 7 | 1 | 431 | 1 | 445 | 0.0 | 596 |
| MS.gene59218.t1 | AT1G43640 | 70.053 | 374 | 94 | 4 | 65 | 431 | 1 | 363 | 0.0 | 536 |
| MS.gene59218.t1 | AT2G47900 | 53.596 | 431 | 175 | 4 | 1 | 431 | 1 | 406 | 2.47e-165 | 471 |
| MS.gene59218.t1 | AT2G47900 | 53.596 | 431 | 175 | 4 | 1 | 431 | 1 | 406 | 2.47e-165 | 471 |
| MS.gene59218.t1 | AT2G47900 | 53.472 | 432 | 175 | 5 | 1 | 431 | 1 | 407 | 8.33e-164 | 467 |
| MS.gene59218.t1 | AT2G18280 | 53.288 | 441 | 148 | 12 | 1 | 431 | 1 | 393 | 3.53e-150 | 432 |
| MS.gene59218.t1 | AT2G18280 | 53.288 | 441 | 148 | 12 | 1 | 431 | 1 | 393 | 3.53e-150 | 432 |
| MS.gene59218.t1 | AT1G47270 | 55.181 | 386 | 135 | 5 | 48 | 431 | 39 | 388 | 4.18e-142 | 411 |
| MS.gene59218.t1 | AT1G47270 | 55.181 | 386 | 135 | 5 | 48 | 431 | 64 | 413 | 8.12e-142 | 411 |
| MS.gene59218.t1 | AT1G47270 | 55.181 | 386 | 135 | 5 | 48 | 431 | 63 | 412 | 9.87e-142 | 411 |
| MS.gene59218.t1 | AT5G18680 | 50.777 | 386 | 156 | 7 | 49 | 431 | 35 | 389 | 1.46e-130 | 382 |
| MS.gene59218.t1 | AT3G06380 | 51.706 | 381 | 149 | 9 | 53 | 431 | 33 | 380 | 5.01e-127 | 372 |
| MS.gene59218.t1 | AT1G25280 | 69.776 | 268 | 71 | 6 | 173 | 431 | 1 | 267 | 3.46e-123 | 358 |
| MS.gene59218.t1 | AT1G25280 | 69.776 | 268 | 71 | 6 | 173 | 431 | 1 | 267 | 3.46e-123 | 358 |
| MS.gene59218.t1 | AT1G53320 | 47.520 | 383 | 156 | 5 | 50 | 431 | 41 | 379 | 2.22e-118 | 350 |
| MS.gene59218.t1 | AT5G18680 | 51.227 | 326 | 126 | 6 | 108 | 431 | 3 | 297 | 3.45e-106 | 316 |
| MS.gene59218.t1 | AT3G06380 | 51.420 | 317 | 120 | 8 | 116 | 431 | 5 | 288 | 4.02e-99 | 298 |
| MS.gene59218.t1 | AT1G61940 | 55.814 | 86 | 38 | 0 | 56 | 141 | 1 | 86 | 2.75e-28 | 112 |
| MS.gene59218.t1 | AT1G61940 | 59.375 | 64 | 26 | 0 | 56 | 119 | 1 | 64 | 8.67e-20 | 88.6 |
Find 124 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATGAGCTCTGGCTGGCC+TGG | 0.187108 | 1.3:+67904769 | None:intergenic |
| ATACCCTCTCTCGGCCTTTC+AGG | 0.201509 | 1.3:-67904365 | MS.gene59218:CDS |
| GCAGCATTGCTTGTTGAAAA+TGG | 0.220754 | 1.3:-67905565 | MS.gene59218:intron |
| ATGTTGGTGCCTTAACTTTA+GGG | 0.281753 | 1.3:-67904566 | MS.gene59218:CDS |
| AATGTTGGTGCCTTAACTTT+AGG | 0.285851 | 1.3:-67904567 | MS.gene59218:CDS |
| CTTTCCGATGTAAGTGTTAC+TGG | 0.296608 | 1.3:+67905456 | None:intergenic |
| CTGTAGGTTCTCAGATATAA+TGG | 0.306980 | 1.3:-67904674 | MS.gene59218:CDS |
| CTCACCTGCTTCAGAGAAAC+AGG | 0.315099 | 1.3:+67906400 | None:intergenic |
| GAATGAGCTCTGGCTGGCCT+GGG | 0.345465 | 1.3:+67904770 | None:intergenic |
| GCCAGCTGAGCATTGTTATA+GGG | 0.349030 | 1.3:+67904973 | None:intergenic |
| CATGGGCTGTTCTGTATAAC+TGG | 0.352285 | 1.3:+67906595 | None:intergenic |
| AGCCAGCTGAGCATTGTTAT+AGG | 0.353413 | 1.3:+67904972 | None:intergenic |
| GTCGCTCCTCATGCCGCAAC+AGG | 0.364636 | 1.3:-67904481 | MS.gene59218:CDS |
| CGTGATGTGAGGGATGGATT+TGG | 0.379788 | 1.3:-67906709 | MS.gene59218:CDS |
| CTCTTCCTTTGCCTCAGTCC+TGG | 0.393245 | 1.3:-67906019 | MS.gene59218:intron |
| GAAAGAATCCTCAAGATTGC+GGG | 0.410283 | 1.3:+67904747 | None:intergenic |
| CTCTGTGCAAGTCGTTCTTC+TGG | 0.410800 | 1.3:+67905516 | None:intergenic |
| GCATGAGGAGCGACAGGTGC+AGG | 0.424142 | 1.3:+67904490 | None:intergenic |
| TAACTGCCACTAGGGACCTT+TGG | 0.430993 | 1.3:+67904907 | None:intergenic |
| TCGTGATGTTATTAAGAGAT+TGG | 0.435663 | 1.3:-67906548 | MS.gene59218:CDS |
| TTTCCCTGTTTCTCTGAAGC+AGG | 0.440467 | 1.3:-67906404 | MS.gene59218:intron |
| TGCAGTTGTTCATGCCATCT+AGG | 0.445754 | 1.3:+67904589 | None:intergenic |
| GACAAGATTATTCTTCAGTT+CGG | 0.446887 | 1.3:-67904424 | MS.gene59218:CDS |
| AATGCTCAGCTGGCTCCTCC+TGG | 0.452432 | 1.3:-67904964 | MS.gene59218:CDS |
| CCCGCTTCATCCCTCGAGCC+TGG | 0.453190 | 1.3:-67904802 | MS.gene59218:CDS |
| AAGGCTTCCTGGACATCAAA+GGG | 0.458001 | 1.3:-67906659 | MS.gene59218:CDS |
| CACAGAGTATGTTATATCAA+TGG | 0.458685 | 1.3:-67905500 | MS.gene59218:CDS |
| GAGCCTGGTGGTGTTGTCCC+AGG | 0.458781 | 1.3:-67904787 | MS.gene59218:CDS |
| TGTGCTGGCTGCGACGGAGC+AGG | 0.465017 | 1.3:+67904457 | None:intergenic |
| TGGAAGCAACTGAGAGTACT+TGG | 0.468061 | 1.3:-67906528 | MS.gene59218:CDS |
| TGTAGGTTCTCAGATATAAT+GGG | 0.470818 | 1.3:-67904673 | MS.gene59218:CDS |
| AGATTGCGGGGAATGAGCTC+TGG | 0.475959 | 1.3:+67904760 | None:intergenic |
| TGTATCATAAATTATGAACT+TGG | 0.479777 | 1.3:+67905002 | None:intergenic |
| TCCCTATAACAATGCTCAGC+TGG | 0.484175 | 1.3:-67904974 | MS.gene59218:CDS |
| AAGGGGCAAGTCGCGTAGTT+CGG | 0.484348 | 1.3:-67906641 | MS.gene59218:CDS |
| TGCGGGGAATGAGCTCTGGC+TGG | 0.484831 | 1.3:+67904764 | None:intergenic |
| GACTTGCCCCTTTGATGTCC+AGG | 0.489493 | 1.3:+67906652 | None:intergenic |
| ACCTATGAGTTGAATGTCCT+TGG | 0.490286 | 1.3:-67904868 | MS.gene59218:CDS |
| TTGTCATGGTCTGACTGTGC+TGG | 0.490534 | 1.3:+67904442 | None:intergenic |
| CCAGGCTCGAGGGATGAAGC+GGG | 0.492821 | 1.3:+67904802 | None:intergenic |
| TGAAGACGAGGAGGAGGGGA+AGG | 0.493522 | 1.3:-67904641 | MS.gene59218:CDS |
| TCACACGTCCCCTAAAGTTA+AGG | 0.494461 | 1.3:+67904557 | None:intergenic |
| TGGCAATGAAGACGAGGAGG+AGG | 0.494605 | 1.3:-67904647 | MS.gene59218:CDS |
| ACCAAGGACATTCAACTCAT+AGG | 0.504041 | 1.3:+67904867 | None:intergenic |
| TTGAATCTACGGCTGCGTCC+AGG | 0.511465 | 1.3:+67904946 | None:intergenic |
| TTAAGAACAAGTCTCCTAGA+TGG | 0.514190 | 1.3:-67904603 | MS.gene59218:CDS |
| GTTGCGGCATGAGGAGCGAC+AGG | 0.514556 | 1.3:+67904484 | None:intergenic |
| TCTGACTGTGCTGGCTGCGA+CGG | 0.514689 | 1.3:+67904451 | None:intergenic |
| GCAGGTCCTGTTGCGGCATG+AGG | 0.520662 | 1.3:+67904475 | None:intergenic |
| CATTCAACTCATAGGTGACC+TGG | 0.520911 | 1.3:+67904875 | None:intergenic |
| TGGCCTGGGACAACACCACC+AGG | 0.526446 | 1.3:+67904784 | None:intergenic |
| GAGGTTGATCATGCAACTCA+TGG | 0.527376 | 1.3:+67906617 | None:intergenic |
| CAGGACTGAGGCAAAGGAAG+AGG | 0.529546 | 1.3:+67906020 | None:intergenic |
| TTCTCAGATATAATGGGAGC+TGG | 0.533677 | 1.3:-67904667 | MS.gene59218:CDS |
| CCCATGGGCTAGCCTTCCAC+CGG | 0.534682 | 1.3:-67906578 | MS.gene59218:CDS |
| ACACTTACATCGGAAAGCTT+AGG | 0.535916 | 1.3:-67905450 | MS.gene59218:intron |
| GCGATGTTGTAACTGCCACT+AGG | 0.538385 | 1.3:+67904898 | None:intergenic |
| GTAGTATTGTTCGTGATGTG+AGG | 0.542989 | 1.3:-67906720 | MS.gene59218:CDS |
| CACGAAGAAGCTCCGGTGGA+AGG | 0.548406 | 1.3:+67906566 | None:intergenic |
| ACCAGGCTCGAGGGATGAAG+CGG | 0.552625 | 1.3:+67904801 | None:intergenic |
| TCCGGTGGAAGGCTAGCCCA+TGG | 0.553438 | 1.3:+67906577 | None:intergenic |
| TAAGGCTTCCTGGACATCAA+AGG | 0.555010 | 1.3:-67906660 | MS.gene59218:CDS |
| ATTCTTCAGTTCGGTAAAGT+CGG | 0.555879 | 1.3:-67904415 | MS.gene59218:CDS |
| TTCGTGGGCCTCTAGTACCA+AGG | 0.556399 | 1.3:+67904851 | None:intergenic |
| GCTTACCAGGACTGAGGCAA+AGG | 0.556568 | 1.3:+67906014 | None:intergenic |
| GCTCATTCCCCGCAATCTTG+AGG | 0.558110 | 1.3:-67904755 | MS.gene59218:CDS |
| TTACAGCCGGGGTATAGGGA+TGG | 0.560354 | 1.3:-67906091 | MS.gene59218:intron |
| ATAGTGCAATTCATCCTTCG+TGG | 0.560544 | 1.3:+67904835 | None:intergenic |
| ACATATCGCAAAAGCCTGAA+AGG | 0.562316 | 1.3:+67904351 | None:intergenic |
| ATAACATCACGAAGAAGCTC+CGG | 0.562691 | 1.3:+67906559 | None:intergenic |
| GGACAACACCACCAGGCTCG+AGG | 0.563929 | 1.3:+67904791 | None:intergenic |
| CGATGTTGTAACTGCCACTA+GGG | 0.565087 | 1.3:+67904899 | None:intergenic |
| GTGCTGCGGTCTGCAAGTCG+TGG | 0.571719 | 1.3:-67906480 | MS.gene59218:CDS |
| GCAACTGAGAGTACTTGGCC+TGG | 0.572741 | 1.3:-67906523 | MS.gene59218:CDS |
| ATTGTTCGTGATGTGAGGGA+TGG | 0.573863 | 1.3:-67906715 | MS.gene59218:CDS |
| CCGGTGGAAGGCTAGCCCAT+GGG | 0.574926 | 1.3:+67906578 | None:intergenic |
| TTGAATGTCCTTGGTACTAG+AGG | 0.577348 | 1.3:-67904859 | MS.gene59218:CDS |
| GGCAATGAAGACGAGGAGGA+GGG | 0.579076 | 1.3:-67904646 | MS.gene59218:CDS |
| ACTGAAGAATAATCTTGTCA+TGG | 0.579174 | 1.3:+67904428 | None:intergenic |
| GGCATGAACAACTGCAATGT+TGG | 0.579920 | 1.3:-67904582 | MS.gene59218:CDS |
| GCAATGAAGACGAGGAGGAG+GGG | 0.583215 | 1.3:-67904645 | MS.gene59218:CDS |
| GACTTGTTCTTAAGAACTAG+AGG | 0.583735 | 1.3:+67904613 | None:intergenic |
| GACTGAGGCAAAGGAAGAGG+TGG | 0.586469 | 1.3:+67906023 | None:intergenic |
| TCAACACTCTTGAATACTGT+GGG | 0.587893 | 1.3:-67906435 | MS.gene59218:CDS |
| CAGTTATACAGAACAGCCCA+TGG | 0.589286 | 1.3:-67906594 | MS.gene59218:CDS |
| CGACGGAGCAGGTCCTGTTG+CGG | 0.591288 | 1.3:+67904468 | None:intergenic |
| GGAAAGAATCCTCAAGATTG+CGG | 0.599386 | 1.3:+67904746 | None:intergenic |
| TAGTGCAATTCATCCTTCGT+GGG | 0.600652 | 1.3:+67904836 | None:intergenic |
| TGTTGGTGCCTTAACTTTAG+GGG | 0.601599 | 1.3:-67904565 | MS.gene59218:CDS |
| CAACTGAGTTTAGCAGCTGT+AGG | 0.602372 | 1.3:-67904690 | MS.gene59218:CDS |
| GTTATCGATCGATCGTGCAA+AGG | 0.614484 | 1.3:+67904714 | None:intergenic |
| GACAACACCACCAGGCTCGA+GGG | 0.616356 | 1.3:+67904792 | None:intergenic |
| GTCAACACTCTTGAATACTG+TGG | 0.616544 | 1.3:-67906436 | MS.gene59218:CDS |
| TAGTATTGTTCGTGATGTGA+GGG | 0.622920 | 1.3:-67906719 | MS.gene59218:CDS |
| GGACTATCGATACCCTCTCT+CGG | 0.623014 | 1.3:-67904374 | MS.gene59218:CDS |
| AAAGCCTGAAAGGCCGAGAG+AGG | 0.624015 | 1.3:+67904361 | None:intergenic |
| TCAGTTCGGTAAAGTCGGCA+AGG | 0.626177 | 1.3:-67904410 | MS.gene59218:CDS |
| AGCTGAGCATTGTTATAGGG+AGG | 0.628040 | 1.3:+67904976 | None:intergenic |
| GCAACCACATGCTTACGACC+AGG | 0.629724 | 1.3:+67906505 | None:intergenic |
| AGATCCAGTAACACTTACAT+CGG | 0.632514 | 1.3:-67905460 | MS.gene59218:CDS |
| CAGGCTCGAGGGATGAAGCG+GGG | 0.635955 | 1.3:+67904803 | None:intergenic |
| GCATGTGGTTGCTTGTGCTG+CGG | 0.636839 | 1.3:-67906494 | MS.gene59218:CDS |
| TGGCAGTTACAACATCGCCC+AGG | 0.640405 | 1.3:-67904893 | MS.gene59218:CDS |
| ATCGTGCAAAGGATAAACTA+CGG | 0.641987 | 1.3:+67904725 | None:intergenic |
| ACATCACGAAGAAGCTCCGG+TGG | 0.646205 | 1.3:+67906562 | None:intergenic |
| ATTCAACTCATAGGTGACCT+GGG | 0.649004 | 1.3:+67904876 | None:intergenic |
| AAGCCTGAAAGGCCGAGAGA+GGG | 0.649007 | 1.3:+67904362 | None:intergenic |
| CGGCAAGGATATGTTTACGA+TGG | 0.649091 | 1.3:-67904395 | MS.gene59218:CDS |
| GCTTCATCCCTCGAGCCTGG+TGG | 0.650835 | 1.3:-67904799 | MS.gene59218:CDS |
| AGCTGGCAATGAAGACGAGG+AGG | 0.651988 | 1.3:-67904650 | MS.gene59218:CDS |
| ATGGATTTGGAAGCTTATCG+AGG | 0.653763 | 1.3:-67906696 | MS.gene59218:CDS |
| GGGAGCTGGCAATGAAGACG+AGG | 0.656703 | 1.3:-67904653 | MS.gene59218:CDS |
| GGGCTGTTCTGTATAACTGG+AGG | 0.657426 | 1.3:+67906598 | None:intergenic |
| AAAGAATCCTCAAGATTGCG+GGG | 0.658101 | 1.3:+67904748 | None:intergenic |
| AGTTATACAGAACAGCCCAT+GGG | 0.669811 | 1.3:-67906593 | MS.gene59218:CDS |
| TTGGCCTGGTCGTAAGCATG+TGG | 0.677764 | 1.3:-67906509 | MS.gene59218:CDS |
| AATCTACGGCTGCGTCCAGG+AGG | 0.679597 | 1.3:+67904949 | None:intergenic |
| GTTTCACCAAAGGTCCCTAG+TGG | 0.689726 | 1.3:-67904913 | MS.gene59218:CDS |
| GATTTGGAAGCTTATCGAGG+CGG | 0.694204 | 1.3:-67906693 | MS.gene59218:CDS |
| ATGGGTCCATCCCTATACCC+CGG | 0.704486 | 1.3:+67906085 | None:intergenic |
| AGGCTTCCTGGACATCAAAG+GGG | 0.710405 | 1.3:-67906658 | MS.gene59218:CDS |
| AGTAAAGCTTACCAGGACTG+AGG | 0.714219 | 1.3:+67906008 | None:intergenic |
| TCACCTGCTTCAGAGAAACA+GGG | 0.717293 | 1.3:+67906401 | None:intergenic |
| TTGGTACTAGAGGCCCACGA+AGG | 0.736988 | 1.3:-67904849 | MS.gene59218:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGATGTTAAAAAACAAG+TGG | - | chr1.3:67904692-67904711 | MS.gene59218:CDS | 20.0% |
| !! | AAGCACATAAATGAAAAATT+AGG | + | chr1.3:67904921-67904940 | None:intergenic | 20.0% |
| !! | ATCAAATCAAATAGTGTATT+AGG | + | chr1.3:67905072-67905091 | None:intergenic | 20.0% |
| !! | CGTTAAATTCATATTTATGA+GGG | + | chr1.3:67905412-67905431 | None:intergenic | 20.0% |
| !! | TCGTTAAATTCATATTTATG+AGG | + | chr1.3:67905413-67905432 | None:intergenic | 20.0% |
| !! | TGTATCATAAATTATGAACT+TGG | + | chr1.3:67906046-67906065 | None:intergenic | 20.0% |
| !! | TTATAATATTTAGTGTGCAA+CGG | + | chr1.3:67904884-67904903 | None:intergenic | 20.0% |
| !!! | AGAAACTTTTCATTTTCATA+TGG | + | chr1.3:67905311-67905330 | None:intergenic | 20.0% |
| !!! | ATATTATAAAATTTAGAGCC+TGG | - | chr1.3:67904895-67904914 | MS.gene59218:CDS | 20.0% |
| !!! | ATTTAACGAATTTTTAGATC+TGG | - | chr1.3:67905424-67905443 | MS.gene59218:intron | 20.0% |
| !!! | ATTTTTCGTAAAGTAATTCT+TGG | + | chr1.3:67905944-67905963 | None:intergenic | 20.0% |
| !!! | TGAATTTAATTTGTATGCAT+TGG | - | chr1.3:67905742-67905761 | MS.gene59218:intron | 20.0% |
| !!! | TTTTTCGTAAAGTAATTCTT+GGG | + | chr1.3:67905943-67905962 | None:intergenic | 20.0% |
| ! | ATTGTCTTGTAAAAAGTTGA+TGG | - | chr1.3:67905704-67905723 | MS.gene59218:intron | 25.0% |
| ! | TTAAATAGCGAGATCTAATT+GGG | - | chr1.3:67905852-67905871 | MS.gene59218:intron | 25.0% |
| ! | TTTAAATAGCGAGATCTAAT+TGG | - | chr1.3:67905851-67905870 | MS.gene59218:intron | 25.0% |
| !! | TGTGTAAAATTGGTTTACAT+TGG | - | chr1.3:67905879-67905898 | MS.gene59218:intron | 25.0% |
| !!! | AATTTTTAGATCTGGTTTGT+CGG | - | chr1.3:67905432-67905451 | MS.gene59218:intron | 25.0% |
| !!! | ATATGGACTCTATTTGTTTT+AGG | - | chr1.3:67905250-67905269 | MS.gene59218:intron | 25.0% |
| AAAGAGAAAGATGAATTGCT+TGG | + | chr1.3:67905196-67905215 | None:intergenic | 30.0% | |
| AAGAAAATTAGACCTGAAAG+AGG | + | chr1.3:67906019-67906038 | None:intergenic | 30.0% | |
| ACTGAAGAATAATCTTGTCA+TGG | + | chr1.3:67906620-67906639 | None:intergenic | 30.0% | |
| CACAGAGTATGTTATATCAA+TGG | - | chr1.3:67905545-67905564 | MS.gene59218:CDS | 30.0% | |
| CACATGCACAAATATCTAAT+TGG | + | chr1.3:67905809-67905828 | None:intergenic | 30.0% | |
| CATAAATGAAAAATTAGGCC+AGG | + | chr1.3:67904916-67904935 | None:intergenic | 30.0% | |
| GACAAGATTATTCTTCAGTT+CGG | - | chr1.3:67906621-67906640 | MS.gene59218:CDS | 30.0% | |
| TAGATATTTGTGCATGTGTA+GGG | - | chr1.3:67905811-67905830 | MS.gene59218:intron | 30.0% | |
| TATTAACTTTCTCCTCTTTC+AGG | - | chr1.3:67906004-67906023 | MS.gene59218:intron | 30.0% | |
| TCGTGATGTTATTAAGAGAT+TGG | - | chr1.3:67904497-67904516 | MS.gene59218:CDS | 30.0% | |
| TGGTTAATGAGTTTCAGTTA+AGG | - | chr1.3:67904712-67904731 | MS.gene59218:CDS | 30.0% | |
| TGTAGGTTCTCAGATATAAT+GGG | - | chr1.3:67906372-67906391 | MS.gene59218:intron | 30.0% | |
| TTAGATATTTGTGCATGTGT+AGG | - | chr1.3:67905810-67905829 | MS.gene59218:intron | 30.0% | |
| ! | CTTTTCATTTTCATATGGCA+TGG | + | chr1.3:67905306-67905325 | None:intergenic | 30.0% |
| !! | TCTTTCAGGTCTAATTTTCT+TGG | - | chr1.3:67906018-67906037 | MS.gene59218:intron | 30.0% |
| !!! | CATTTTGTTTTCGATCTGTT+TGG | - | chr1.3:67905633-67905652 | MS.gene59218:intron | 30.0% |
| !!! | CTTTTTTCGAGTTGAATCTA+CGG | + | chr1.3:67906113-67906132 | None:intergenic | 30.0% |
| !!! | TGTTGATTTTGTTTTACAGC+CGG | - | chr1.3:67904941-67904960 | MS.gene59218:CDS | 30.0% |
| ACCCTAACTGTAACAATCAT+TGG | - | chr1.3:67904764-67904783 | MS.gene59218:CDS | 35.0% | |
| AGATCCAGTAACACTTACAT+CGG | - | chr1.3:67905585-67905604 | MS.gene59218:intron | 35.0% | |
| ATCGTGCAAAGGATAAACTA+CGG | + | chr1.3:67906323-67906342 | None:intergenic | 35.0% | |
| ATTCTTCAGTTCGGTAAAGT+CGG | - | chr1.3:67906630-67906649 | MS.gene59218:CDS | 35.0% | |
| CTCGAAAAAAGTTTCACCAA+AGG | - | chr1.3:67906122-67906141 | MS.gene59218:intron | 35.0% | |
| CTGTAGGTTCTCAGATATAA+TGG | - | chr1.3:67906371-67906390 | MS.gene59218:intron | 35.0% | |
| GAATTGCTTGGATTGACAAA+GGG | + | chr1.3:67905184-67905203 | None:intergenic | 35.0% | |
| GCATGGACAACAAGAAATAT+TGG | + | chr1.3:67905289-67905308 | None:intergenic | 35.0% | |
| GCCAATGATTGTTACAGTTA+GGG | + | chr1.3:67904768-67904787 | None:intergenic | 35.0% | |
| GTAAAGTAATTCTTGGGTGA+TGG | + | chr1.3:67905937-67905956 | None:intergenic | 35.0% | |
| GTTATGAGATACTCTGTCTA+TGG | + | chr1.3:67905673-67905692 | None:intergenic | 35.0% | |
| TAATTCTGCTGAACTGCATA+TGG | - | chr1.3:67905233-67905252 | MS.gene59218:intron | 35.0% | |
| TAGTATTGTTCGTGATGTGA+GGG | - | chr1.3:67904326-67904345 | MS.gene59218:CDS | 35.0% | |
| TCAACAAAGTAAAGCTTACC+AGG | + | chr1.3:67905047-67905066 | None:intergenic | 35.0% | |
| TCAACACTCTTGAATACTGT+GGG | - | chr1.3:67904610-67904629 | MS.gene59218:CDS | 35.0% | |
| TCAGGAGATTAGTAGAAGTT+TGG | + | chr1.3:67904790-67904809 | None:intergenic | 35.0% | |
| TGAATTGCTTGGATTGACAA+AGG | + | chr1.3:67905185-67905204 | None:intergenic | 35.0% | |
| TTAAGAACAAGTCTCCTAGA+TGG | - | chr1.3:67906442-67906461 | MS.gene59218:CDS | 35.0% | |
| TTACAGTTAGGGTTCAAAGT+CGG | + | chr1.3:67904757-67904776 | None:intergenic | 35.0% | |
| TTATGAGTTATCGCATTTCG+TGG | - | chr1.3:67905142-67905161 | MS.gene59218:intron | 35.0% | |
| ! | AATGTTGGTGCCTTAACTTT+AGG | - | chr1.3:67906478-67906497 | MS.gene59218:CDS | 35.0% |
| ! | ATGTTGGTGCCTTAACTTTA+GGG | - | chr1.3:67906479-67906498 | MS.gene59218:CDS | 35.0% |
| ! | CTTTTGATGAAACACTGGAT+GGG | + | chr1.3:67904981-67905000 | None:intergenic | 35.0% |
| ! | GACTTGTTCTTAAGAACTAG+AGG | + | chr1.3:67906435-67906454 | None:intergenic | 35.0% |
| ! | TCTTTTGATGAAACACTGGA+TGG | + | chr1.3:67904982-67905001 | None:intergenic | 35.0% |
| ! | TGTCTCTTTTGATGAAACAC+TGG | + | chr1.3:67904986-67905005 | None:intergenic | 35.0% |
| !!! | GGTTCAATTTTTTGCTATGC+TGG | - | chr1.3:67905348-67905367 | MS.gene59218:intron | 35.0% |
| !!! | GTTGATTTTGTTTTACAGCC+GGG | - | chr1.3:67904942-67904961 | MS.gene59218:CDS | 35.0% |
| !!! | TTGATTTTGTTTTACAGCCG+GGG | - | chr1.3:67904943-67904962 | MS.gene59218:CDS | 35.0% |
| AAAGAATCCTCAAGATTGCG+GGG | + | chr1.3:67906300-67906319 | None:intergenic | 40.0% | |
| AACGACAGGGTTAAGACAAA+AGG | - | chr1.3:67904837-67904856 | MS.gene59218:CDS | 40.0% | |
| ACACTTACATCGGAAAGCTT+AGG | - | chr1.3:67905595-67905614 | MS.gene59218:intron | 40.0% | |
| ACATATCGCAAAAGCCTGAA+AGG | + | chr1.3:67906697-67906716 | None:intergenic | 40.0% | |
| ACCAAGGACATTCAACTCAT+AGG | + | chr1.3:67906181-67906200 | None:intergenic | 40.0% | |
| AGTTATACAGAACAGCCCAT+GGG | - | chr1.3:67904452-67904471 | MS.gene59218:CDS | 40.0% | |
| ATAACATCACGAAGAAGCTC+CGG | + | chr1.3:67904489-67904508 | None:intergenic | 40.0% | |
| ATAGTGCAATTCATCCTTCG+TGG | + | chr1.3:67906213-67906232 | None:intergenic | 40.0% | |
| ATGGATTTGGAAGCTTATCG+AGG | - | chr1.3:67904349-67904368 | MS.gene59218:CDS | 40.0% | |
| ATTCAACTCATAGGTGACCT+GGG | + | chr1.3:67906172-67906191 | None:intergenic | 40.0% | |
| ATTGAACCAACACGCAAAGT+AGG | + | chr1.3:67905336-67905355 | None:intergenic | 40.0% | |
| ATTGGGCGTCTGTGTAAAAT+TGG | - | chr1.3:67905869-67905888 | MS.gene59218:intron | 40.0% | |
| CTTTCCGATGTAAGTGTTAC+TGG | + | chr1.3:67905592-67905611 | None:intergenic | 40.0% | |
| GAAAGAATCCTCAAGATTGC+GGG | + | chr1.3:67906301-67906320 | None:intergenic | 40.0% | |
| GGAAAGAATCCTCAAGATTG+CGG | + | chr1.3:67906302-67906321 | None:intergenic | 40.0% | |
| GGCCAATGATTGTTACAGTT+AGG | + | chr1.3:67904769-67904788 | None:intergenic | 40.0% | |
| GTAGTATTGTTCGTGATGTG+AGG | - | chr1.3:67904325-67904344 | MS.gene59218:CDS | 40.0% | |
| GTCAACACTCTTGAATACTG+TGG | - | chr1.3:67904609-67904628 | MS.gene59218:CDS | 40.0% | |
| TACATCGGAAAGCTTAGGTA+TGG | - | chr1.3:67905600-67905619 | MS.gene59218:intron | 40.0% | |
| TAGTGCAATTCATCCTTCGT+GGG | + | chr1.3:67906212-67906231 | None:intergenic | 40.0% | |
| TTCTATCCTACTTTGCGTGT+TGG | - | chr1.3:67905327-67905346 | MS.gene59218:intron | 40.0% | |
| TTGAATGTCCTTGGTACTAG+AGG | - | chr1.3:67906186-67906205 | MS.gene59218:intron | 40.0% | |
| ! | ACCTATGAGTTGAATGTCCT+TGG | - | chr1.3:67906177-67906196 | MS.gene59218:intron | 40.0% |
| ! | GCAGCATTGCTTGTTGAAAA+TGG | - | chr1.3:67905480-67905499 | MS.gene59218:CDS | 40.0% |
| ! | TGTTGGTGCCTTAACTTTAG+GGG | - | chr1.3:67906480-67906499 | MS.gene59218:CDS | 40.0% |
| ! | TTCTCAGATATAATGGGAGC+TGG | - | chr1.3:67906378-67906397 | MS.gene59218:intron | 40.0% |
| ! | TTCTTGGGTGATGGCAAAAA+AGG | + | chr1.3:67905928-67905947 | None:intergenic | 40.0% |
| ! | TTTTCAACAAGCAATGCTGC+AGG | + | chr1.3:67905480-67905499 | None:intergenic | 40.0% |
| AAGGCTTCCTGGACATCAAA+GGG | - | chr1.3:67904386-67904405 | MS.gene59218:CDS | 45.0% | |
| AATCTCCTGACCGATTACCA+GGG | - | chr1.3:67904800-67904819 | MS.gene59218:CDS | 45.0% | |
| AGTAAAGCTTACCAGGACTG+AGG | + | chr1.3:67905040-67905059 | None:intergenic | 45.0% | |
| ATTGTTCGTGATGTGAGGGA+TGG | - | chr1.3:67904330-67904349 | MS.gene59218:CDS | 45.0% | |
| CAACTGAGTTTAGCAGCTGT+AGG | - | chr1.3:67906355-67906374 | MS.gene59218:intron | 45.0% | |
| CAGTTATACAGAACAGCCCA+TGG | - | chr1.3:67904451-67904470 | MS.gene59218:CDS | 45.0% | |
| CATTCAACTCATAGGTGACC+TGG | + | chr1.3:67906173-67906192 | None:intergenic | 45.0% | |
| CGATGTTGTAACTGCCACTA+GGG | + | chr1.3:67906149-67906168 | None:intergenic | 45.0% | |
| CGGCAAGGATATGTTTACGA+TGG | - | chr1.3:67906650-67906669 | MS.gene59218:CDS | 45.0% | |
| GATTTGGAAGCTTATCGAGG+CGG | - | chr1.3:67904352-67904371 | MS.gene59218:CDS | 45.0% | |
| GGCATGAACAACTGCAATGT+TGG | - | chr1.3:67906463-67906482 | MS.gene59218:CDS | 45.0% | |
| GTTATCGATCGATCGTGCAA+AGG | + | chr1.3:67906334-67906353 | None:intergenic | 45.0% | |
| TAAGGCTTCCTGGACATCAA+AGG | - | chr1.3:67904385-67904404 | MS.gene59218:CDS | 45.0% | |
| TAATCTCCTGACCGATTACC+AGG | - | chr1.3:67904799-67904818 | MS.gene59218:CDS | 45.0% | |
| TCACACGTCCCCTAAAGTTA+AGG | + | chr1.3:67906491-67906510 | None:intergenic | 45.0% | |
| TCACCTGCTTCAGAGAAACA+GGG | + | chr1.3:67904647-67904666 | None:intergenic | 45.0% | |
| TCCCTATAACAATGCTCAGC+TGG | - | chr1.3:67906071-67906090 | MS.gene59218:CDS | 45.0% | |
| TGCAGTTGTTCATGCCATCT+AGG | + | chr1.3:67906459-67906478 | None:intergenic | 45.0% | |
| ! | AGCCAGCTGAGCATTGTTAT+AGG | + | chr1.3:67906076-67906095 | None:intergenic | 45.0% |
| ! | AGCTGAGCATTGTTATAGGG+AGG | + | chr1.3:67906072-67906091 | None:intergenic | 45.0% |
| ! | CATGGGCTGTTCTGTATAAC+TGG | + | chr1.3:67904453-67904472 | None:intergenic | 45.0% |
| ! | GAGGTTGATCATGCAACTCA+TGG | + | chr1.3:67904431-67904450 | None:intergenic | 45.0% |
| ! | GCCAGCTGAGCATTGTTATA+GGG | + | chr1.3:67906075-67906094 | None:intergenic | 45.0% |
| ! | TGTTTTACAGCCGGGGTATA+GGG | - | chr1.3:67904950-67904969 | MS.gene59218:CDS | 45.0% |
| !! | TGGAAGCAACTGAGAGTACT+TGG | - | chr1.3:67904517-67904536 | MS.gene59218:CDS | 45.0% |
| !! | TTGTTTTACAGCCGGGGTAT+AGG | - | chr1.3:67904949-67904968 | MS.gene59218:CDS | 45.0% |
| !! | TTTCCCTGTTTCTCTGAAGC+AGG | - | chr1.3:67904641-67904660 | MS.gene59218:CDS | 45.0% |
| !!! | AGTTTTGAGGTAAGGCTTCC+TGG | - | chr1.3:67904375-67904394 | MS.gene59218:CDS | 45.0% |
| AGGCTTCCTGGACATCAAAG+GGG | - | chr1.3:67904387-67904406 | MS.gene59218:CDS | 50.0% | |
| ATCTCCTGACCGATTACCAG+GGG | - | chr1.3:67904801-67904820 | MS.gene59218:CDS | 50.0% | |
| CTCACCTGCTTCAGAGAAAC+AGG | + | chr1.3:67904648-67904667 | None:intergenic | 50.0% | |
| CTCTGTGCAAGTCGTTCTTC+TGG | + | chr1.3:67905532-67905551 | None:intergenic | 50.0% | |
| GCGATGTTGTAACTGCCACT+AGG | + | chr1.3:67906150-67906169 | None:intergenic | 50.0% | |
| GGACTATCGATACCCTCTCT+CGG | - | chr1.3:67906671-67906690 | MS.gene59218:CDS | 50.0% | |
| GGGCTGTTCTGTATAACTGG+AGG | + | chr1.3:67904450-67904469 | None:intergenic | 50.0% | |
| GTTTCACCAAAGGTCCCTAG+TGG | - | chr1.3:67906132-67906151 | MS.gene59218:intron | 50.0% | |
| TAACTGCCACTAGGGACCTT+TGG | + | chr1.3:67906141-67906160 | None:intergenic | 50.0% | |
| TCAGTTCGGTAAAGTCGGCA+AGG | - | chr1.3:67906635-67906654 | MS.gene59218:CDS | 50.0% | |
| TCTTAACCCTGTCGTTCCCA+GGG | + | chr1.3:67904833-67904852 | None:intergenic | 50.0% | |
| TTGTCATGGTCTGACTGTGC+TGG | + | chr1.3:67906606-67906625 | None:intergenic | 50.0% | |
| ! | CGTGATGTGAGGGATGGATT+TGG | - | chr1.3:67904336-67904355 | MS.gene59218:CDS | 50.0% |
| ! | CTTATCGAGGCGGAGTTTTG+AGG | - | chr1.3:67904362-67904381 | MS.gene59218:CDS | 50.0% |
| AAAGCCTGAAAGGCCGAGAG+AGG | + | chr1.3:67906687-67906706 | None:intergenic | 55.0% | |
| AAGCCTGAAAGGCCGAGAGA+GGG | + | chr1.3:67906686-67906705 | None:intergenic | 55.0% | |
| AAGGGGCAAGTCGCGTAGTT+CGG | - | chr1.3:67904404-67904423 | MS.gene59218:CDS | 55.0% | |
| ACATCACGAAGAAGCTCCGG+TGG | + | chr1.3:67904486-67904505 | None:intergenic | 55.0% | |
| AGATTGCGGGGAATGAGCTC+TGG | + | chr1.3:67906288-67906307 | None:intergenic | 55.0% | |
| AGCTGGCAATGAAGACGAGG+AGG | - | chr1.3:67906395-67906414 | MS.gene59218:intron | 55.0% | |
| ATACCCTCTCTCGGCCTTTC+AGG | - | chr1.3:67906680-67906699 | MS.gene59218:CDS | 55.0% | |
| ATGGGTCCATCCCTATACCC+CGG | + | chr1.3:67904963-67904982 | None:intergenic | 55.0% | |
| CAGGACTGAGGCAAAGGAAG+AGG | + | chr1.3:67905028-67905047 | None:intergenic | 55.0% | |
| CTCTTCCTTTGCCTCAGTCC+TGG | - | chr1.3:67905026-67905045 | MS.gene59218:intron | 55.0% | |
| CTTAACCCTGTCGTTCCCAG+GGG | + | chr1.3:67904832-67904851 | None:intergenic | 55.0% | |
| GACTGAGGCAAAGGAAGAGG+TGG | + | chr1.3:67905025-67905044 | None:intergenic | 55.0% | |
| GACTTGCCCCTTTGATGTCC+AGG | + | chr1.3:67904396-67904415 | None:intergenic | 55.0% | |
| GCAACCACATGCTTACGACC+AGG | + | chr1.3:67904543-67904562 | None:intergenic | 55.0% | |
| GCAATGAAGACGAGGAGGAG+GGG | - | chr1.3:67906400-67906419 | MS.gene59218:intron | 55.0% | |
| GCATGTGGTTGCTTGTGCTG+CGG | - | chr1.3:67904551-67904570 | MS.gene59218:CDS | 55.0% | |
| GCTCATTCCCCGCAATCTTG+AGG | - | chr1.3:67906290-67906309 | MS.gene59218:intron | 55.0% | |
| GCTTACCAGGACTGAGGCAA+AGG | + | chr1.3:67905034-67905053 | None:intergenic | 55.0% | |
| GGCAATGAAGACGAGGAGGA+GGG | - | chr1.3:67906399-67906418 | MS.gene59218:intron | 55.0% | |
| GTCTTAACCCTGTCGTTCCC+AGG | + | chr1.3:67904834-67904853 | None:intergenic | 55.0% | |
| TGGCAATGAAGACGAGGAGG+AGG | - | chr1.3:67906398-67906417 | MS.gene59218:intron | 55.0% | |
| TGGCAGTTACAACATCGCCC+AGG | - | chr1.3:67906152-67906171 | MS.gene59218:intron | 55.0% | |
| TTACAGCCGGGGTATAGGGA+TGG | - | chr1.3:67904954-67904973 | MS.gene59218:CDS | 55.0% | |
| TTCGTGGGCCTCTAGTACCA+AGG | + | chr1.3:67906197-67906216 | None:intergenic | 55.0% | |
| TTGAATCTACGGCTGCGTCC+AGG | + | chr1.3:67906102-67906121 | None:intergenic | 55.0% | |
| TTGGCCTGGTCGTAAGCATG+TGG | - | chr1.3:67904536-67904555 | MS.gene59218:CDS | 55.0% | |
| TTGGTACTAGAGGCCCACGA+AGG | - | chr1.3:67906196-67906215 | MS.gene59218:intron | 55.0% | |
| !! | GCAACTGAGAGTACTTGGCC+TGG | - | chr1.3:67904522-67904541 | MS.gene59218:CDS | 55.0% |
| !!! | CGAGGCGGAGTTTTGAGGTA+AGG | - | chr1.3:67904367-67904386 | MS.gene59218:CDS | 55.0% |
| AAGGCCCCTGGTAATCGGTC+AGG | + | chr1.3:67904808-67904827 | None:intergenic | 60.0% | |
| AATCTACGGCTGCGTCCAGG+AGG | + | chr1.3:67906099-67906118 | None:intergenic | 60.0% | |
| ACCAGGCTCGAGGGATGAAG+CGG | + | chr1.3:67906247-67906266 | None:intergenic | 60.0% | |
| ATTACCAGGGGCCTTTCCCC+TGG | - | chr1.3:67904813-67904832 | MS.gene59218:CDS | 60.0% | |
| CACGAAGAAGCTCCGGTGGA+AGG | + | chr1.3:67904482-67904501 | None:intergenic | 60.0% | |
| CCTTTCCCCTGGGAACGACA+GGG | - | chr1.3:67904824-67904843 | MS.gene59218:CDS | 60.0% | |
| GACAACACCACCAGGCTCGA+GGG | + | chr1.3:67906256-67906275 | None:intergenic | 60.0% | |
| GGGAGCTGGCAATGAAGACG+AGG | - | chr1.3:67906392-67906411 | MS.gene59218:intron | 60.0% | |
| GGGGAAAGGCCCCTGGTAAT+CGG | + | chr1.3:67904813-67904832 | None:intergenic | 60.0% | |
| TGAAGACGAGGAGGAGGGGA+AGG | - | chr1.3:67906404-67906423 | MS.gene59218:intron | 60.0% | |
| TTACCAGGGGCCTTTCCCCT+GGG | - | chr1.3:67904814-67904833 | MS.gene59218:CDS | 60.0% | |
| ! | AATGCTCAGCTGGCTCCTCC+TGG | - | chr1.3:67906081-67906100 | MS.gene59218:CDS | 60.0% |
| !! | GAATGAGCTCTGGCTGGCCT+GGG | + | chr1.3:67906278-67906297 | None:intergenic | 60.0% |
| !! | TCTGACTGTGCTGGCTGCGA+CGG | + | chr1.3:67906597-67906616 | None:intergenic | 60.0% |
| CAGGCTCGAGGGATGAAGCG+GGG | + | chr1.3:67906245-67906264 | None:intergenic | 65.0% | |
| CCAGGCTCGAGGGATGAAGC+GGG | + | chr1.3:67906246-67906265 | None:intergenic | 65.0% | |
| CCCTGTCGTTCCCAGGGGAA+AGG | + | chr1.3:67904827-67904846 | None:intergenic | 65.0% | |
| CGACGGAGCAGGTCCTGTTG+CGG | + | chr1.3:67906580-67906599 | None:intergenic | 65.0% | |
| GCAGGTCCTGTTGCGGCATG+AGG | + | chr1.3:67906573-67906592 | None:intergenic | 65.0% | |
| GCATGAGGAGCGACAGGTGC+AGG | + | chr1.3:67906558-67906577 | None:intergenic | 65.0% | |
| GCCTTTCCCCTGGGAACGAC+AGG | - | chr1.3:67904823-67904842 | MS.gene59218:CDS | 65.0% | |
| GCTTCATCCCTCGAGCCTGG+TGG | - | chr1.3:67906246-67906265 | MS.gene59218:intron | 65.0% | |
| GGACAACACCACCAGGCTCG+AGG | + | chr1.3:67906257-67906276 | None:intergenic | 65.0% | |
| GTCGCTCCTCATGCCGCAAC+AGG | - | chr1.3:67906564-67906583 | MS.gene59218:CDS | 65.0% | |
| GTGCTGCGGTCTGCAAGTCG+TGG | - | chr1.3:67904565-67904584 | MS.gene59218:CDS | 65.0% | |
| GTTGCGGCATGAGGAGCGAC+AGG | + | chr1.3:67906564-67906583 | None:intergenic | 65.0% | |
| TGGCCTGGGACAACACCACC+AGG | + | chr1.3:67906264-67906283 | None:intergenic | 65.0% | |
| ! | CCGGTGGAAGGCTAGCCCAT+GGG | + | chr1.3:67904470-67904489 | None:intergenic | 65.0% |
| ! | GGAATGAGCTCTGGCTGGCC+TGG | + | chr1.3:67906279-67906298 | None:intergenic | 65.0% |
| ! | TCCGGTGGAAGGCTAGCCCA+TGG | + | chr1.3:67904471-67904490 | None:intergenic | 65.0% |
| ! | TGCGGGGAATGAGCTCTGGC+TGG | + | chr1.3:67906284-67906303 | None:intergenic | 65.0% |
| !! | CCCATGGGCTAGCCTTCCAC+CGG | - | chr1.3:67904467-67904486 | MS.gene59218:CDS | 65.0% |
| !! | GAGCCTGGTGGTGTTGTCCC+AGG | - | chr1.3:67906258-67906277 | MS.gene59218:intron | 65.0% |
| CCCGCTTCATCCCTCGAGCC+TGG | - | chr1.3:67906243-67906262 | MS.gene59218:intron | 70.0% | |
| GTTCCCAGGGGAAAGGCCCC+TGG | + | chr1.3:67904820-67904839 | None:intergenic | 70.0% | |
| !! | TGTGCTGGCTGCGACGGAGC+AGG | + | chr1.3:67906591-67906610 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 67904315 | 67906752 | 67904315 | ID=MS.gene59218 |
| chr1.3 | mRNA | 67904315 | 67906752 | 67904315 | ID=MS.gene59218.t1;Parent=MS.gene59218 |
| chr1.3 | exon | 67906405 | 67906752 | 67906405 | ID=MS.gene59218.t1.exon1;Parent=MS.gene59218.t1 |
| chr1.3 | CDS | 67906405 | 67906752 | 67906405 | ID=cds.MS.gene59218.t1;Parent=MS.gene59218.t1 |
| chr1.3 | exon | 67906020 | 67906107 | 67906020 | ID=MS.gene59218.t1.exon2;Parent=MS.gene59218.t1 |
| chr1.3 | CDS | 67906020 | 67906107 | 67906020 | ID=cds.MS.gene59218.t1;Parent=MS.gene59218.t1 |
| chr1.3 | exon | 67905451 | 67905583 | 67905451 | ID=MS.gene59218.t1.exon3;Parent=MS.gene59218.t1 |
| chr1.3 | CDS | 67905451 | 67905583 | 67905451 | ID=cds.MS.gene59218.t1;Parent=MS.gene59218.t1 |
| chr1.3 | exon | 67904315 | 67905041 | 67904315 | ID=MS.gene59218.t1.exon4;Parent=MS.gene59218.t1 |
| chr1.3 | CDS | 67904315 | 67905041 | 67904315 | ID=cds.MS.gene59218.t1;Parent=MS.gene59218.t1 |
| Gene Sequence |
| Protein sequence |
