Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23088.t1 | XP_013450228.1 | 95.7 | 162 | 7 | 0 | 1 | 162 | 157 | 318 | 9.50E-82 | 312.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23088.t1 | P19684 | 63.8 | 163 | 58 | 1 | 1 | 162 | 162 | 324 | 1.7e-55 | 216.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23088.t1 | A0A072U4H5 | 95.7 | 162 | 7 | 0 | 1 | 162 | 157 | 318 | 6.9e-82 | 312.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene23088 | 0.801928 | 7.14E-49 | -1.69E-46 |
| MS.gene049150 | MS.gene23088 | 0.807517 | 4.86E-50 | -1.69E-46 |
| MS.gene049151 | MS.gene23088 | 0.814453 | 1.53E-51 | -1.69E-46 |
| MS.gene049153 | MS.gene23088 | 0.808909 | 2.46E-50 | -1.69E-46 |
| MS.gene049260 | MS.gene23088 | 0.83451 | 2.87E-56 | -1.69E-46 |
| MS.gene049284 | MS.gene23088 | 0.817547 | 3.12E-52 | -1.69E-46 |
| MS.gene049297 | MS.gene23088 | 0.843044 | 1.78E-58 | -1.69E-46 |
| MS.gene049346 | MS.gene23088 | 0.842725 | 2.17E-58 | -1.69E-46 |
| MS.gene049351 | MS.gene23088 | 0.811282 | 7.57E-51 | -1.69E-46 |
| MS.gene049378 | MS.gene23088 | 0.800407 | 1.46E-48 | -1.69E-46 |
| MS.gene049389 | MS.gene23088 | 0.838847 | 2.25E-57 | -1.69E-46 |
| MS.gene049491 | MS.gene23088 | 0.843431 | 1.41E-58 | -1.69E-46 |
| MS.gene049599 | MS.gene23088 | -0.810491 | 1.12E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene23088 | 0.91244 | 1.94E-83 | -1.69E-46 |
| MS.gene049910 | MS.gene23088 | 0.859259 | 4.68E-63 | -1.69E-46 |
| MS.gene049915 | MS.gene23088 | 0.833441 | 5.32E-56 | -1.69E-46 |
| MS.gene050076 | MS.gene23088 | 0.835136 | 2.00E-56 | -1.69E-46 |
| MS.gene050099 | MS.gene23088 | 0.858998 | 5.61E-63 | -1.69E-46 |
| MS.gene050128 | MS.gene23088 | 0.835634 | 1.50E-56 | -1.69E-46 |
| MS.gene050226 | MS.gene23088 | 0.811937 | 5.45E-51 | -1.69E-46 |
| MS.gene050227 | MS.gene23088 | 0.814727 | 1.33E-51 | -1.69E-46 |
| MS.gene050228 | MS.gene23088 | 0.808669 | 2.76E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene23088 | 0.913916 | 3.53E-84 | -1.69E-46 |
| MS.gene050330 | MS.gene23088 | -0.842664 | 2.25E-58 | -1.69E-46 |
| MS.gene050397 | MS.gene23088 | 0.837741 | 4.35E-57 | -1.69E-46 |
| MS.gene050404 | MS.gene23088 | 0.843297 | 1.53E-58 | -1.69E-46 |
| MS.gene050406 | MS.gene23088 | 0.848588 | 5.57E-60 | -1.69E-46 |
| MS.gene050426 | MS.gene23088 | -0.815243 | 1.02E-51 | -1.69E-46 |
| MS.gene050432 | MS.gene23088 | 0.83019 | 3.38E-55 | -1.69E-46 |
| MS.gene050464 | MS.gene23088 | 0.850098 | 2.11E-60 | -1.69E-46 |
| MS.gene050529 | MS.gene23088 | 0.880729 | 4.32E-70 | -1.69E-46 |
| MS.gene050558 | MS.gene23088 | 0.869225 | 3.63E-66 | -1.69E-46 |
| MS.gene050623 | MS.gene23088 | -0.812848 | 3.45E-51 | -1.69E-46 |
| MS.gene050642 | MS.gene23088 | 0.873758 | 1.15E-67 | -1.69E-46 |
| MS.gene050650 | MS.gene23088 | 0.800025 | 1.75E-48 | -1.69E-46 |
| MS.gene050670 | MS.gene23088 | 0.828098 | 1.09E-54 | -1.69E-46 |
| MS.gene050812 | MS.gene23088 | 0.839534 | 1.50E-57 | -1.69E-46 |
| MS.gene050820 | MS.gene23088 | 0.813109 | 3.02E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene23088 | 0.880408 | 5.63E-70 | -1.69E-46 |
| MS.gene051171 | MS.gene23088 | 0.807565 | 4.75E-50 | -1.69E-46 |
| MS.gene05119 | MS.gene23088 | -0.842247 | 2.91E-58 | -1.69E-46 |
| MS.gene051240 | MS.gene23088 | 0.85431 | 1.34E-61 | -1.69E-46 |
| MS.gene051242 | MS.gene23088 | 0.836093 | 1.15E-56 | -1.69E-46 |
| MS.gene051471 | MS.gene23088 | 0.873308 | 1.63E-67 | -1.69E-46 |
| MS.gene051525 | MS.gene23088 | 0.803275 | 3.77E-49 | -1.69E-46 |
| MS.gene051582 | MS.gene23088 | 0.886962 | 2.17E-72 | -1.69E-46 |
| MS.gene051662 | MS.gene23088 | 0.871297 | 7.61E-67 | -1.69E-46 |
| MS.gene051663 | MS.gene23088 | 0.874226 | 7.97E-68 | -1.69E-46 |
| MS.gene051860 | MS.gene23088 | 0.852663 | 3.98E-61 | -1.69E-46 |
| MS.gene051983 | MS.gene23088 | 0.866353 | 3.03E-65 | -1.69E-46 |
| MS.gene052011 | MS.gene23088 | -0.817389 | 3.38E-52 | -1.69E-46 |
| MS.gene052077 | MS.gene23088 | 0.847483 | 1.12E-59 | -1.69E-46 |
| MS.gene052078 | MS.gene23088 | 0.870583 | 1.31E-66 | -1.69E-46 |
| MS.gene052176 | MS.gene23088 | 0.826487 | 2.64E-54 | -1.69E-46 |
| MS.gene052178 | MS.gene23088 | 0.865715 | 4.83E-65 | -1.69E-46 |
| MS.gene052188 | MS.gene23088 | 0.871003 | 9.51E-67 | -1.69E-46 |
| MS.gene052207 | MS.gene23088 | 0.814628 | 1.40E-51 | -1.69E-46 |
| MS.gene052253 | MS.gene23088 | 0.83409 | 3.66E-56 | -1.69E-46 |
| MS.gene052309 | MS.gene23088 | -0.84564 | 3.58E-59 | -1.69E-46 |
| MS.gene052310 | MS.gene23088 | 0.866808 | 2.17E-65 | -1.69E-46 |
| MS.gene052326 | MS.gene23088 | 0.85263 | 4.07E-61 | -1.69E-46 |
| MS.gene052340 | MS.gene23088 | 0.884033 | 2.71E-71 | -1.69E-46 |
| MS.gene052344 | MS.gene23088 | -0.811007 | 8.68E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene23088 | 0.803822 | 2.90E-49 | -1.69E-46 |
| MS.gene052600 | MS.gene23088 | 0.866501 | 2.72E-65 | -1.69E-46 |
| MS.gene053209 | MS.gene23088 | 0.844144 | 9.07E-59 | -1.69E-46 |
| MS.gene053330 | MS.gene23088 | 0.818187 | 2.23E-52 | -1.69E-46 |
| MS.gene053557 | MS.gene23088 | 0.88066 | 4.57E-70 | -1.69E-46 |
| MS.gene053559 | MS.gene23088 | 0.824098 | 9.70E-54 | -1.69E-46 |
| MS.gene053836 | MS.gene23088 | 0.921202 | 4.84E-88 | -1.69E-46 |
| MS.gene053907 | MS.gene23088 | 0.890377 | 1.04E-73 | -1.69E-46 |
| MS.gene053928 | MS.gene23088 | 0.843823 | 1.11E-58 | -1.69E-46 |
| MS.gene053971 | MS.gene23088 | 0.860415 | 2.10E-63 | -1.69E-46 |
| MS.gene054123 | MS.gene23088 | 0.835708 | 1.43E-56 | -1.69E-46 |
| MS.gene054327 | MS.gene23088 | 0.815764 | 7.82E-52 | -1.69E-46 |
| MS.gene054349 | MS.gene23088 | 0.810959 | 8.89E-51 | -1.69E-46 |
| MS.gene054473 | MS.gene23088 | 0.847351 | 1.22E-59 | -1.69E-46 |
| MS.gene054542 | MS.gene23088 | 0.804066 | 2.58E-49 | -1.69E-46 |
| MS.gene05455 | MS.gene23088 | 0.843465 | 1.38E-58 | -1.69E-46 |
| MS.gene054667 | MS.gene23088 | 0.818302 | 2.10E-52 | -1.69E-46 |
| MS.gene05467 | MS.gene23088 | -0.806866 | 6.68E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene23088 | 0.867288 | 1.53E-65 | -1.69E-46 |
| MS.gene054942 | MS.gene23088 | 0.85318 | 2.83E-61 | -1.69E-46 |
| MS.gene054983 | MS.gene23088 | 0.870966 | 9.78E-67 | -1.69E-46 |
| MS.gene055116 | MS.gene23088 | 0.840068 | 1.09E-57 | -1.69E-46 |
| MS.gene055277 | MS.gene23088 | 0.875339 | 3.33E-68 | -1.69E-46 |
| MS.gene055303 | MS.gene23088 | 0.800705 | 1.27E-48 | -1.69E-46 |
| MS.gene055390 | MS.gene23088 | 0.856625 | 2.83E-62 | -1.69E-46 |
| MS.gene055422 | MS.gene23088 | 0.889759 | 1.82E-73 | -1.69E-46 |
| MS.gene055428 | MS.gene23088 | 0.902365 | 1.04E-78 | -1.69E-46 |
| MS.gene05553 | MS.gene23088 | 0.877406 | 6.45E-69 | -1.69E-46 |
| MS.gene055604 | MS.gene23088 | 0.820054 | 8.40E-53 | -1.69E-46 |
| MS.gene055712 | MS.gene23088 | 0.85621 | 3.75E-62 | -1.69E-46 |
| MS.gene055859 | MS.gene23088 | 0.827977 | 1.16E-54 | -1.69E-46 |
| MS.gene056314 | MS.gene23088 | 0.80333 | 3.67E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene23088 | 0.86017 | 2.49E-63 | -1.69E-46 |
| MS.gene056451 | MS.gene23088 | 0.846478 | 2.12E-59 | -1.69E-46 |
| MS.gene056609 | MS.gene23088 | 0.800769 | 1.23E-48 | -1.69E-46 |
| MS.gene056612 | MS.gene23088 | 0.895788 | 6.87E-76 | -1.69E-46 |
| MS.gene056659 | MS.gene23088 | 0.820327 | 7.27E-53 | -1.69E-46 |
| MS.gene056723 | MS.gene23088 | 0.841863 | 3.67E-58 | -1.69E-46 |
| MS.gene056772 | MS.gene23088 | 0.809841 | 1.55E-50 | -1.69E-46 |
| MS.gene056796 | MS.gene23088 | 0.828443 | 8.96E-55 | -1.69E-46 |
| MS.gene056875 | MS.gene23088 | 0.814486 | 1.50E-51 | -1.69E-46 |
| MS.gene056899 | MS.gene23088 | -0.807401 | 5.15E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene23088 | 0.857449 | 1.62E-62 | -1.69E-46 |
| MS.gene05702 | MS.gene23088 | 0.860178 | 2.48E-63 | -1.69E-46 |
| MS.gene057121 | MS.gene23088 | 0.897748 | 1.04E-76 | -1.69E-46 |
| MS.gene057245 | MS.gene23088 | 0.842485 | 2.51E-58 | -1.69E-46 |
| MS.gene057260 | MS.gene23088 | 0.80571 | 1.17E-49 | -1.69E-46 |
| MS.gene05733 | MS.gene23088 | 0.809937 | 1.48E-50 | -1.69E-46 |
| MS.gene057396 | MS.gene23088 | 0.813948 | 1.98E-51 | -1.69E-46 |
| MS.gene057439 | MS.gene23088 | 0.858162 | 9.96E-63 | -1.69E-46 |
| MS.gene057448 | MS.gene23088 | 0.838289 | 3.14E-57 | -1.69E-46 |
| MS.gene057449 | MS.gene23088 | 0.830318 | 3.14E-55 | -1.69E-46 |
| MS.gene057450 | MS.gene23088 | 0.844097 | 9.33E-59 | -1.69E-46 |
| MS.gene057469 | MS.gene23088 | 0.806619 | 7.53E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene23088 | 0.92266 | 7.36E-89 | -1.69E-46 |
| MS.gene058082 | MS.gene23088 | 0.842431 | 2.60E-58 | -1.69E-46 |
| MS.gene05811 | MS.gene23088 | 0.905372 | 4.60E-80 | -1.69E-46 |
| MS.gene058142 | MS.gene23088 | 0.893206 | 7.80E-75 | -1.69E-46 |
| MS.gene058233 | MS.gene23088 | 0.875034 | 4.23E-68 | -1.69E-46 |
| MS.gene058276 | MS.gene23088 | 0.901588 | 2.30E-78 | -1.69E-46 |
| MS.gene058293 | MS.gene23088 | 0.856965 | 2.25E-62 | -1.69E-46 |
| MS.gene058365 | MS.gene23088 | 0.852665 | 3.98E-61 | -1.69E-46 |
| MS.gene058660 | MS.gene23088 | 0.855845 | 4.80E-62 | -1.69E-46 |
| MS.gene058710 | MS.gene23088 | 0.821616 | 3.67E-53 | -1.69E-46 |
| MS.gene058746 | MS.gene23088 | 0.824987 | 5.99E-54 | -1.69E-46 |
| MS.gene058749 | MS.gene23088 | 0.836589 | 8.56E-57 | -1.69E-46 |
| MS.gene058787 | MS.gene23088 | 0.807092 | 5.98E-50 | -1.69E-46 |
| MS.gene058833 | MS.gene23088 | 0.866934 | 1.98E-65 | -1.69E-46 |
| MS.gene058845 | MS.gene23088 | 0.880859 | 3.88E-70 | -1.69E-46 |
| MS.gene05886 | MS.gene23088 | 0.812509 | 4.09E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene23088 | 0.892062 | 2.24E-74 | -1.69E-46 |
| MS.gene059247 | MS.gene23088 | 0.824703 | 6.99E-54 | -1.69E-46 |
| MS.gene059285 | MS.gene23088 | 0.82701 | 1.98E-54 | -1.69E-46 |
| MS.gene059326 | MS.gene23088 | 0.81656 | 5.19E-52 | -1.69E-46 |
| MS.gene059342 | MS.gene23088 | 0.807858 | 4.12E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene23088 | 0.805236 | 1.47E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene23088 | 0.880046 | 7.57E-70 | -1.69E-46 |
| MS.gene059597 | MS.gene23088 | 0.879531 | 1.16E-69 | -1.69E-46 |
| MS.gene05959 | MS.gene23088 | 0.834566 | 2.78E-56 | -1.69E-46 |
| MS.gene059676 | MS.gene23088 | 0.866047 | 3.79E-65 | -1.69E-46 |
| MS.gene059688 | MS.gene23088 | 0.856267 | 3.61E-62 | -1.69E-46 |
| MS.gene059692 | MS.gene23088 | 0.874465 | 6.61E-68 | -1.69E-46 |
| MS.gene059695 | MS.gene23088 | 0.872799 | 2.41E-67 | -1.69E-46 |
| MS.gene059708 | MS.gene23088 | 0.822874 | 1.88E-53 | -1.69E-46 |
| MS.gene059788 | MS.gene23088 | 0.80267 | 5.03E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene23088 | 0.899783 | 1.41E-77 | -1.69E-46 |
| MS.gene059894 | MS.gene23088 | 0.921089 | 5.59E-88 | -1.69E-46 |
| MS.gene059899 | MS.gene23088 | 0.908447 | 1.69E-81 | -1.69E-46 |
| MS.gene060083 | MS.gene23088 | 0.802046 | 6.75E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene23088 | 0.825998 | 3.45E-54 | -1.69E-46 |
| MS.gene060407 | MS.gene23088 | 0.875466 | 3.01E-68 | -1.69E-46 |
| MS.gene060476 | MS.gene23088 | 0.829302 | 5.55E-55 | -1.69E-46 |
| MS.gene06090 | MS.gene23088 | 0.828621 | 8.12E-55 | -1.69E-46 |
| MS.gene061049 | MS.gene23088 | 0.901405 | 2.77E-78 | -1.69E-46 |
| MS.gene061051 | MS.gene23088 | -0.837972 | 3.79E-57 | -1.69E-46 |
| MS.gene061112 | MS.gene23088 | 0.835947 | 1.25E-56 | -1.69E-46 |
| MS.gene061113 | MS.gene23088 | 0.801864 | 7.36E-49 | -1.69E-46 |
| MS.gene061114 | MS.gene23088 | -0.804709 | 1.90E-49 | -1.69E-46 |
| MS.gene061154 | MS.gene23088 | 0.801248 | 9.85E-49 | -1.69E-46 |
| MS.gene061159 | MS.gene23088 | 0.825416 | 4.75E-54 | -1.69E-46 |
| MS.gene061265 | MS.gene23088 | 0.836284 | 1.02E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23088.t1 | MTR_7g106440 | 95.679 | 162 | 7 | 0 | 1 | 162 | 157 | 318 | 5.98e-114 | 326 |
| MS.gene23088.t1 | MTR_7g106440 | 36.667 | 90 | 52 | 1 | 42 | 131 | 100 | 184 | 5.61e-13 | 65.5 |
| MS.gene23088.t1 | MTR_1g056520 | 64.331 | 157 | 50 | 2 | 1 | 157 | 156 | 306 | 2.74e-67 | 207 |
| MS.gene23088.t1 | MTR_1g045510 | 34.074 | 135 | 77 | 1 | 1 | 135 | 161 | 283 | 1.59e-25 | 99.0 |
| MS.gene23088.t1 | MTR_1g045510 | 35.789 | 95 | 60 | 1 | 52 | 146 | 109 | 202 | 2.00e-12 | 63.5 |
| MS.gene23088.t1 | MTR_3g027140 | 39.394 | 132 | 76 | 1 | 1 | 132 | 108 | 235 | 5.59e-25 | 96.7 |
| MS.gene23088.t1 | MTR_3g027140 | 35.165 | 91 | 57 | 1 | 44 | 132 | 46 | 136 | 9.97e-12 | 61.2 |
| MS.gene23088.t1 | MTR_3g075500 | 34.815 | 135 | 82 | 3 | 1 | 135 | 157 | 285 | 8.96e-21 | 86.7 |
| MS.gene23088.t1 | MTR_3g075500 | 37.931 | 87 | 52 | 1 | 51 | 135 | 102 | 188 | 1.72e-11 | 61.2 |
| MS.gene23088.t1 | MTR_1g064230 | 40.000 | 115 | 63 | 2 | 22 | 135 | 166 | 275 | 9.44e-21 | 86.3 |
| MS.gene23088.t1 | MTR_1g064230 | 38.710 | 93 | 52 | 1 | 56 | 148 | 84 | 171 | 8.66e-11 | 58.9 |
| MS.gene23088.t1 | MTR_4g104470 | 34.074 | 135 | 80 | 2 | 1 | 135 | 170 | 295 | 1.43e-19 | 83.6 |
| MS.gene23088.t1 | MTR_4g104470 | 46.341 | 82 | 44 | 0 | 57 | 138 | 123 | 204 | 1.83e-16 | 75.1 |
| MS.gene23088.t1 | MTR_3g080130 | 36.559 | 93 | 59 | 0 | 57 | 149 | 37 | 129 | 7.51e-19 | 78.2 |
| MS.gene23088.t1 | MTR_7g013740 | 45.122 | 82 | 45 | 0 | 54 | 135 | 38 | 119 | 9.97e-19 | 78.2 |
| MS.gene23088.t1 | MTR_7g013730 | 43.529 | 85 | 48 | 0 | 54 | 138 | 38 | 122 | 1.27e-18 | 80.1 |
| MS.gene23088.t1 | MTR_3g075500 | 35.294 | 119 | 71 | 3 | 1 | 119 | 157 | 269 | 5.68e-17 | 75.9 |
| MS.gene23088.t1 | MTR_3g075500 | 37.931 | 87 | 52 | 1 | 51 | 135 | 102 | 188 | 1.36e-11 | 61.2 |
| MS.gene23088.t1 | MTR_4g070080 | 37.500 | 80 | 50 | 0 | 53 | 132 | 3 | 82 | 5.41e-16 | 70.5 |
| MS.gene23088.t1 | MTR_4g070080 | 37.500 | 80 | 50 | 0 | 53 | 132 | 3 | 82 | 1.30e-15 | 70.1 |
| MS.gene23088.t1 | MTR_4g070190 | 37.500 | 80 | 50 | 0 | 53 | 132 | 5 | 84 | 1.40e-15 | 70.1 |
| MS.gene23088.t1 | MTR_4g070140 | 39.759 | 83 | 50 | 0 | 50 | 132 | 2 | 84 | 2.34e-15 | 70.1 |
| MS.gene23088.t1 | MTR_3g084040 | 41.463 | 82 | 47 | 1 | 54 | 135 | 34 | 114 | 3.47e-15 | 68.9 |
| MS.gene23088.t1 | MTR_4g109540 | 37.975 | 79 | 49 | 0 | 57 | 135 | 43 | 121 | 9.36e-15 | 70.1 |
| MS.gene23088.t1 | MTR_3g025880 | 37.500 | 88 | 54 | 1 | 49 | 135 | 36 | 123 | 4.47e-14 | 68.9 |
| MS.gene23088.t1 | MTR_5g030020 | 32.117 | 137 | 85 | 3 | 1 | 136 | 143 | 272 | 1.65e-13 | 67.0 |
| MS.gene23088.t1 | MTR_4g109540 | 38.750 | 80 | 48 | 1 | 56 | 135 | 51 | 129 | 7.80e-13 | 64.7 |
| MS.gene23088.t1 | MTR_3g084040 | 43.939 | 66 | 36 | 1 | 54 | 119 | 34 | 98 | 2.45e-12 | 60.5 |
| MS.gene23088.t1 | MTR_1g080150 | 31.132 | 106 | 72 | 1 | 56 | 161 | 132 | 236 | 1.14e-11 | 61.2 |
| MS.gene23088.t1 | MTR_1g061870 | 29.323 | 133 | 90 | 2 | 3 | 135 | 243 | 371 | 1.39e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23088.t1 | AT3G52380 | 61.818 | 165 | 59 | 2 | 1 | 161 | 164 | 328 | 1.34e-69 | 213 |
| MS.gene23088.t1 | AT1G60000 | 34.815 | 135 | 77 | 1 | 1 | 135 | 133 | 256 | 1.21e-25 | 99.0 |
| MS.gene23088.t1 | AT3G52150 | 37.121 | 132 | 81 | 1 | 1 | 132 | 124 | 253 | 1.39e-21 | 88.2 |
| MS.gene23088.t1 | AT3G52150 | 37.121 | 132 | 81 | 1 | 1 | 132 | 124 | 253 | 1.39e-21 | 88.2 |
| MS.gene23088.t1 | AT2G37220 | 33.103 | 145 | 87 | 2 | 1 | 135 | 139 | 283 | 1.61e-21 | 88.6 |
| MS.gene23088.t1 | AT2G37220 | 40.449 | 89 | 48 | 1 | 57 | 145 | 92 | 175 | 4.38e-14 | 68.6 |
| MS.gene23088.t1 | AT3G53460 | 43.750 | 80 | 45 | 0 | 56 | 135 | 257 | 336 | 4.42e-20 | 85.5 |
| MS.gene23088.t1 | AT3G53460 | 42.718 | 103 | 48 | 3 | 45 | 146 | 92 | 184 | 1.18e-12 | 64.7 |
| MS.gene23088.t1 | AT3G53460 | 43.750 | 80 | 45 | 0 | 56 | 135 | 257 | 336 | 4.42e-20 | 85.5 |
| MS.gene23088.t1 | AT3G53460 | 42.718 | 103 | 48 | 3 | 45 | 146 | 92 | 184 | 1.18e-12 | 64.7 |
| MS.gene23088.t1 | AT3G53460 | 43.750 | 80 | 45 | 0 | 56 | 135 | 257 | 336 | 4.42e-20 | 85.5 |
| MS.gene23088.t1 | AT3G53460 | 42.718 | 103 | 48 | 3 | 45 | 146 | 92 | 184 | 1.18e-12 | 64.7 |
| MS.gene23088.t1 | AT3G53460 | 43.750 | 80 | 45 | 0 | 56 | 135 | 278 | 357 | 5.09e-20 | 85.5 |
| MS.gene23088.t1 | AT4G24770 | 34.043 | 141 | 80 | 4 | 1 | 141 | 198 | 325 | 4.00e-19 | 82.4 |
| MS.gene23088.t1 | AT4G24770 | 40.506 | 79 | 47 | 0 | 57 | 135 | 151 | 229 | 5.34e-12 | 62.8 |
| MS.gene23088.t1 | AT4G24770 | 34.043 | 141 | 80 | 4 | 1 | 141 | 198 | 325 | 4.00e-19 | 82.4 |
| MS.gene23088.t1 | AT4G24770 | 40.506 | 79 | 47 | 0 | 57 | 135 | 151 | 229 | 5.34e-12 | 62.8 |
| MS.gene23088.t1 | AT2G35410 | 36.170 | 141 | 70 | 3 | 1 | 132 | 142 | 271 | 6.27e-19 | 81.6 |
| MS.gene23088.t1 | AT5G50250 | 33.333 | 135 | 81 | 3 | 1 | 135 | 161 | 286 | 2.10e-18 | 80.1 |
| MS.gene23088.t1 | AT5G50250 | 43.182 | 88 | 48 | 1 | 50 | 135 | 105 | 192 | 2.79e-14 | 68.9 |
| MS.gene23088.t1 | AT4G13850 | 47.059 | 85 | 43 | 1 | 57 | 141 | 36 | 118 | 4.77e-18 | 76.3 |
| MS.gene23088.t1 | AT4G13850 | 47.059 | 85 | 43 | 1 | 57 | 141 | 36 | 118 | 5.88e-18 | 76.3 |
| MS.gene23088.t1 | AT4G13850 | 47.059 | 85 | 43 | 1 | 57 | 141 | 36 | 118 | 6.59e-18 | 76.3 |
| MS.gene23088.t1 | AT4G39260 | 38.272 | 81 | 50 | 0 | 55 | 135 | 5 | 85 | 2.03e-17 | 73.2 |
| MS.gene23088.t1 | AT4G13850 | 46.914 | 81 | 43 | 0 | 57 | 137 | 36 | 116 | 2.30e-17 | 73.9 |
| MS.gene23088.t1 | AT3G23830 | 40.964 | 83 | 49 | 0 | 55 | 137 | 34 | 116 | 1.75e-16 | 72.0 |
| MS.gene23088.t1 | AT3G23830 | 40.964 | 83 | 49 | 0 | 55 | 137 | 34 | 116 | 1.75e-16 | 72.0 |
| MS.gene23088.t1 | AT4G39260 | 38.462 | 78 | 48 | 0 | 55 | 132 | 5 | 82 | 2.13e-16 | 71.6 |
| MS.gene23088.t1 | AT3G08000 | 36.458 | 96 | 61 | 0 | 57 | 152 | 42 | 137 | 3.73e-16 | 71.2 |
| MS.gene23088.t1 | AT4G39260 | 38.462 | 78 | 48 | 0 | 55 | 132 | 5 | 82 | 5.59e-16 | 71.6 |
| MS.gene23088.t1 | AT1G01080 | 35.156 | 128 | 77 | 3 | 1 | 125 | 156 | 280 | 5.63e-16 | 73.6 |
| MS.gene23088.t1 | AT1G01080 | 35.156 | 128 | 77 | 3 | 1 | 125 | 157 | 281 | 5.68e-16 | 73.6 |
| MS.gene23088.t1 | AT2G21660 | 37.500 | 80 | 50 | 0 | 53 | 132 | 5 | 84 | 1.01e-15 | 70.5 |
| MS.gene23088.t1 | AT2G21660 | 37.500 | 80 | 50 | 0 | 53 | 132 | 5 | 84 | 1.43e-15 | 70.5 |
| MS.gene23088.t1 | AT3G26420 | 38.750 | 80 | 49 | 0 | 53 | 132 | 4 | 83 | 8.87e-15 | 69.7 |
| MS.gene23088.t1 | AT5G61030 | 36.145 | 83 | 53 | 0 | 54 | 136 | 38 | 120 | 1.05e-14 | 70.1 |
| MS.gene23088.t1 | AT5G61030 | 36.145 | 83 | 53 | 0 | 54 | 136 | 38 | 120 | 1.05e-14 | 70.1 |
| MS.gene23088.t1 | AT1G01080 | 35.246 | 122 | 73 | 3 | 1 | 119 | 156 | 274 | 3.67e-14 | 68.6 |
| MS.gene23088.t1 | AT4G39260 | 37.500 | 64 | 40 | 0 | 55 | 118 | 5 | 68 | 2.43e-12 | 60.5 |
| MS.gene23088.t1 | AT5G47320 | 38.372 | 86 | 51 | 1 | 57 | 142 | 32 | 115 | 2.62e-12 | 62.4 |
| MS.gene23088.t1 | AT1G74230 | 37.500 | 80 | 49 | 1 | 54 | 133 | 32 | 110 | 3.51e-12 | 63.2 |
| MS.gene23088.t1 | AT5G06210 | 29.464 | 112 | 66 | 1 | 57 | 155 | 35 | 146 | 1.23e-11 | 59.7 |
| MS.gene23088.t1 | AT3G16380 | 31.818 | 132 | 81 | 4 | 5 | 132 | 253 | 379 | 1.28e-11 | 62.0 |
| MS.gene23088.t1 | AT1G54080 | 31.496 | 127 | 73 | 2 | 7 | 133 | 113 | 225 | 1.53e-11 | 61.6 |
| MS.gene23088.t1 | AT3G04500 | 40.541 | 74 | 44 | 0 | 56 | 129 | 137 | 210 | 1.53e-11 | 60.8 |
| MS.gene23088.t1 | AT4G13860 | 38.667 | 75 | 46 | 0 | 57 | 131 | 4 | 78 | 1.90e-11 | 57.4 |
Find 46 sgRNAs with CRISPR-Local
Find 89 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGGCCGTTGCGATTGAATT+TGG | 0.193724 | 7.2:+7533046 | MS.gene23088:CDS |
| TGCTGAACAGCCAGGCTTAC+TGG | 0.195504 | 7.2:+7532791 | MS.gene23088:CDS |
| AATGGAAGATCTCGGGGTTT+TGG | 0.242272 | 7.2:+7532840 | MS.gene23088:CDS |
| CAGTCCCCAACCAAGGTTTC+CGG | 0.310988 | 7.2:-7532742 | None:intergenic |
| TGTACTTACCACACCGTTCA+TGG | 0.342393 | 7.2:-7532910 | None:intergenic |
| ACTAACCTTTCACCTCCTTT+TGG | 0.342769 | 7.2:-7532657 | None:intergenic |
| GAAGCAATTCGAATGTTTGA+TGG | 0.364675 | 7.2:+7531992 | MS.gene23088:CDS |
| GGAGGTGAAAGGTTAGTAAT+GGG | 0.413296 | 7.2:+7532663 | MS.gene23088:CDS |
| GCTGAACAGCCAGGCTTACT+GGG | 0.446466 | 7.2:+7532792 | MS.gene23088:CDS |
| CTATGCCGGAAACCTTGGTT+GGG | 0.458422 | 7.2:+7532737 | MS.gene23088:CDS |
| AAGATCTATGCCGGAAACCT+TGG | 0.470085 | 7.2:+7532732 | MS.gene23088:CDS |
| TCTTCAATTACTGGAGGAGA+TGG | 0.482825 | 7.2:-7533086 | None:intergenic |
| ACCTTAGCACCCAGTAAGCC+TGG | 0.485093 | 7.2:-7532801 | None:intergenic |
| GAGGGACAATGGAAGATCTC+GGG | 0.485772 | 7.2:+7532833 | MS.gene23088:CDS |
| TGAAACTGCTGAGCATTTGG+AGG | 0.489835 | 7.2:+7532875 | MS.gene23088:CDS |
| GATGCCTTTGCTGAACAGCC+AGG | 0.508427 | 7.2:+7532783 | MS.gene23088:CDS |
| AATCATCTTTCTTCACGTGC+TGG | 0.510076 | 7.2:-7533153 | None:intergenic |
| TGCAATGATATACAGCAAGT+TGG | 0.512442 | 7.2:+7532600 | MS.gene23088:intron |
| CCAAATTCAATCGCAACGGC+CGG | 0.515657 | 7.2:-7533046 | None:intergenic |
| AGAGGGACAATGGAAGATCT+CGG | 0.522954 | 7.2:+7532832 | MS.gene23088:CDS |
| GCCAGGCTTACTGGGTGCTA+AGG | 0.524031 | 7.2:+7532800 | MS.gene23088:CDS |
| TCTATGCCGGAAACCTTGGT+TGG | 0.535060 | 7.2:+7532736 | MS.gene23088:CDS |
| AGGAGGTGAAAGGTTAGTAA+TGG | 0.541569 | 7.2:+7532662 | MS.gene23088:CDS |
| AACTTCCCAGAAGTGCCAAA+AGG | 0.552002 | 7.2:+7532642 | MS.gene23088:CDS |
| AGCCCTCACAAGATCTATGC+CGG | 0.567319 | 7.2:+7532723 | MS.gene23088:CDS |
| TGGTTGGGGACTGAACTCTC+AGG | 0.577275 | 7.2:+7532752 | MS.gene23088:CDS |
| GTCATCTATGAGAGGGACAA+TGG | 0.578967 | 7.2:+7532822 | MS.gene23088:CDS |
| AATGATATACAGCAAGTTGG+TGG | 0.588262 | 7.2:+7532603 | MS.gene23088:intron |
| TGCTAAGGTCATCTATGAGA+GGG | 0.594561 | 7.2:+7532815 | MS.gene23088:CDS |
| GCTGCTTTGAACGCCATGAA+CGG | 0.600524 | 7.2:+7532897 | MS.gene23088:CDS |
| ATATACAGCAAGTTGGTGGT+AGG | 0.600597 | 7.2:+7532607 | MS.gene23088:intron |
| TTTCCGGCATAGATCTTGTG+AGG | 0.602123 | 7.2:-7532726 | None:intergenic |
| TATGCCGGAAACCTTGGTTG+GGG | 0.610260 | 7.2:+7532738 | MS.gene23088:CDS |
| TAAGCCTGGCTGTTCAGCAA+AGG | 0.618059 | 7.2:-7532787 | None:intergenic |
| AAGTGCCAAAAGGAGGTGAA+AGG | 0.618488 | 7.2:+7532652 | MS.gene23088:CDS |
| AGTTGGTGGTAGGAGTGCTA+AGG | 0.622193 | 7.2:+7532617 | MS.gene23088:CDS |
| GAGAGTTCAGTCCCCAACCA+AGG | 0.628580 | 7.2:-7532749 | None:intergenic |
| GTGCTAAGGTCATCTATGAG+AGG | 0.629825 | 7.2:+7532814 | MS.gene23088:CDS |
| TTCCGGCATAGATCTTGTGA+GGG | 0.633745 | 7.2:-7532725 | None:intergenic |
| GCAGCCAAATTCAATCGCAA+CGG | 0.634188 | 7.2:-7533050 | None:intergenic |
| TTCCCAGAAGTGCCAAAAGG+AGG | 0.636421 | 7.2:+7532645 | MS.gene23088:CDS |
| AAAGTAAGGAACAGCTACAG+AGG | 0.638782 | 7.2:+7532690 | MS.gene23088:CDS |
| GAGGTGAAAGGTTAGTAATG+GGG | 0.654669 | 7.2:+7532664 | MS.gene23088:CDS |
| AGGGACAATGGAAGATCTCG+GGG | 0.654949 | 7.2:+7532834 | MS.gene23088:CDS |
| GATTGAATTTGGCTGCAGCG+AGG | 0.729863 | 7.2:+7533057 | MS.gene23088:CDS |
| TTTGAACGCCATGAACGGTG+TGG | 0.764216 | 7.2:+7532902 | MS.gene23088:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTAAATAATCAATTTATC+AGG | + | chr7.2:7532474-7532493 | MS.gene23088:intron | 15.0% |
| !! | AATACAAAAAACAATGTTGA+AGG | + | chr7.2:7533110-7533129 | MS.gene23088:CDS | 20.0% |
| !!! | TACTTAGTTTTATTTGATTC+AGG | + | chr7.2:7532041-7532060 | MS.gene23088:intron | 20.0% |
| !!! | TTTGTATTTTCTTCAATTAC+TGG | - | chr7.2:7533098-7533117 | None:intergenic | 20.0% |
| ! | AAAGAAAGAGATATATTTGC+TGG | - | chr7.2:7532236-7532255 | None:intergenic | 25.0% |
| ! | AAGTATTTACTATTGTGACT+TGG | + | chr7.2:7532123-7532142 | MS.gene23088:intron | 25.0% |
| !! | TTATCAGGATCTTTTATAGT+TGG | + | chr7.2:7532489-7532508 | MS.gene23088:intron | 25.0% |
| !! | TTATTTGATTCAGGTTTCAT+AGG | + | chr7.2:7532050-7532069 | MS.gene23088:intron | 25.0% |
| !!! | TTTGTTTTGCAATTTCAAGT+TGG | + | chr7.2:7532947-7532966 | MS.gene23088:intron | 25.0% |
| AAAAAACAATGTTGAAGGCT+CGG | + | chr7.2:7533115-7533134 | MS.gene23088:CDS | 30.0% | |
| TGCAATTCTCTGTCATATAA+AGG | - | chr7.2:7532298-7532317 | None:intergenic | 30.0% | |
| TTTAATAGTTGTCGCAGTAA+TGG | + | chr7.2:7532254-7532273 | MS.gene23088:intron | 30.0% | |
| ! | GTATTTTCTTCAATTACTGG+AGG | - | chr7.2:7533095-7533114 | None:intergenic | 30.0% |
| ! | TAATGTGATGCAATGTTTTC+AGG | + | chr7.2:7533013-7533032 | MS.gene23088:intron | 30.0% |
| ! | TCAAAGCTTTGATTAGAGTA+TGG | - | chr7.2:7532436-7532455 | None:intergenic | 30.0% |
| ! | TGTTGTGTGTTTCATCATTT+TGG | + | chr7.2:7532194-7532213 | MS.gene23088:intron | 30.0% |
| ! | TTTGATTAGAGTATGGACTA+GGG | - | chr7.2:7532429-7532448 | None:intergenic | 30.0% |
| !!! | AGTTGGTTTTATGCAAAGTT+AGG | + | chr7.2:7532506-7532525 | MS.gene23088:intron | 30.0% |
| AACATTGCATCACATTAGCA+AGG | - | chr7.2:7533010-7533029 | None:intergenic | 35.0% | |
| CTTTGATTAGAGTATGGACT+AGG | - | chr7.2:7532430-7532449 | None:intergenic | 35.0% | |
| GAAGCAATTCGAATGTTTGA+TGG | + | chr7.2:7531992-7532011 | MS.gene23088:CDS | 35.0% | |
| TGCAATGATATACAGCAAGT+TGG | + | chr7.2:7532600-7532619 | MS.gene23088:intron | 35.0% | |
| TGGTTGCAAAAACTGCAAAA+CGG | - | chr7.2:7532353-7532372 | None:intergenic | 35.0% | |
| ! | AATGATATACAGCAAGTTGG+TGG | + | chr7.2:7532603-7532622 | MS.gene23088:intron | 35.0% |
| ! | GTGTGTTTCATCATTTTGGA+TGG | + | chr7.2:7532198-7532217 | MS.gene23088:intron | 35.0% |
| ! | TAGTAATGGGGCAAAAAGTA+AGG | + | chr7.2:7532676-7532695 | MS.gene23088:CDS | 35.0% |
| ! | TTGATTCAGGTTTCATAGGA+GGG | + | chr7.2:7532054-7532073 | MS.gene23088:intron | 35.0% |
| ! | TTTGATTCAGGTTTCATAGG+AGG | + | chr7.2:7532053-7532072 | MS.gene23088:intron | 35.0% |
| !! | TGGACTAGGGCTTTAAATAA+AGG | - | chr7.2:7532416-7532435 | None:intergenic | 35.0% |
| !!! | TTTTGAAACTGCTGAGCATT+TGG | + | chr7.2:7532872-7532891 | MS.gene23088:CDS | 35.0% |
| AAAGTAAGGAACAGCTACAG+AGG | + | chr7.2:7532690-7532709 | MS.gene23088:CDS | 40.0% | |
| AGGAGGTGAAAGGTTAGTAA+TGG | + | chr7.2:7532662-7532681 | MS.gene23088:CDS | 40.0% | |
| CAGAGAATTGCAGTCAAATG+CGG | + | chr7.2:7532306-7532325 | MS.gene23088:intron | 40.0% | |
| GAGGTGAAAGGTTAGTAATG+GGG | + | chr7.2:7532664-7532683 | MS.gene23088:CDS | 40.0% | |
| GGAGGTGAAAGGTTAGTAAT+GGG | + | chr7.2:7532663-7532682 | MS.gene23088:CDS | 40.0% | |
| TCTTCAATTACTGGAGGAGA+TGG | - | chr7.2:7533089-7533108 | None:intergenic | 40.0% | |
| TGCTAAGGTCATCTATGAGA+GGG | + | chr7.2:7532815-7532834 | MS.gene23088:CDS | 40.0% | |
| ! | ACTAACCTTTCACCTCCTTT+TGG | - | chr7.2:7532660-7532679 | None:intergenic | 40.0% |
| ! | GTGACTTGGCAAAACAATGT+TGG | + | chr7.2:7532137-7532156 | MS.gene23088:intron | 40.0% |
| !! | ATATACAGCAAGTTGGTGGT+AGG | + | chr7.2:7532607-7532626 | MS.gene23088:intron | 40.0% |
| !! | CAATGTTTTCAGGAGGTTCA+AGG | + | chr7.2:7533023-7533042 | MS.gene23088:intron | 40.0% |
| !! | TGTGATGCAATGTTTTCAGG+AGG | + | chr7.2:7533016-7533035 | MS.gene23088:intron | 40.0% |
| AAAGGTCTACAGCCGCAATA+TGG | - | chr7.2:7532398-7532417 | None:intergenic | 45.0% | |
| AAGATCTATGCCGGAAACCT+TGG | + | chr7.2:7532732-7532751 | MS.gene23088:CDS | 45.0% | |
| AAGTGCCAAAAGGAGGTGAA+AGG | + | chr7.2:7532652-7532671 | MS.gene23088:CDS | 45.0% | |
| AGAGGGACAATGGAAGATCT+CGG | + | chr7.2:7532832-7532851 | MS.gene23088:CDS | 45.0% | |
| CATCACATTAGCAAGGAACG+AGG | - | chr7.2:7533003-7533022 | None:intergenic | 45.0% | |
| GCAGCCAAATTCAATCGCAA+CGG | - | chr7.2:7533053-7533072 | None:intergenic | 45.0% | |
| GTCATCTATGAGAGGGACAA+TGG | + | chr7.2:7532822-7532841 | MS.gene23088:CDS | 45.0% | |
| GTGCTAAGGTCATCTATGAG+AGG | + | chr7.2:7532814-7532833 | MS.gene23088:CDS | 45.0% | |
| TGAAACTGCTGAGCATTTGG+AGG | + | chr7.2:7532875-7532894 | MS.gene23088:CDS | 45.0% | |
| TGTACTTACCACACCGTTCA+TGG | - | chr7.2:7532913-7532932 | None:intergenic | 45.0% | |
| TTCCGGCATAGATCTTGTGA+GGG | - | chr7.2:7532728-7532747 | None:intergenic | 45.0% | |
| TTTCCGGCATAGATCTTGTG+AGG | - | chr7.2:7532729-7532748 | None:intergenic | 45.0% | |
| ! | AATGGAAGATCTCGGGGTTT+TGG | + | chr7.2:7532840-7532859 | MS.gene23088:CDS | 45.0% |
| ! | ATTCAGGTTTCATAGGAGGG+TGG | + | chr7.2:7532057-7532076 | MS.gene23088:intron | 45.0% |
| ! | CGGTGTGGTAAGTACAGTTT+TGG | + | chr7.2:7532917-7532936 | MS.gene23088:intron | 45.0% |
| ! | CTGCAAAACGGTTCTGATTG+AGG | - | chr7.2:7532341-7532360 | None:intergenic | 45.0% |
| !! | AACTTCCCAGAAGTGCCAAA+AGG | + | chr7.2:7532642-7532661 | MS.gene23088:CDS | 45.0% |
| AGCCCTCACAAGATCTATGC+CGG | + | chr7.2:7532723-7532742 | MS.gene23088:CDS | 50.0% | |
| AGGGACAATGGAAGATCTCG+GGG | + | chr7.2:7532834-7532853 | MS.gene23088:CDS | 50.0% | |
| CCAAATTCAATCGCAACGGC+CGG | - | chr7.2:7533049-7533068 | None:intergenic | 50.0% | |
| CTATGCCGGAAACCTTGGTT+GGG | + | chr7.2:7532737-7532756 | MS.gene23088:CDS | 50.0% | |
| GAGGGACAATGGAAGATCTC+GGG | + | chr7.2:7532833-7532852 | MS.gene23088:CDS | 50.0% | |
| GATTGAATTTGGCTGCAGCG+AGG | + | chr7.2:7533057-7533076 | MS.gene23088:CDS | 50.0% | |
| TAAGCCTGGCTGTTCAGCAA+AGG | - | chr7.2:7532790-7532809 | None:intergenic | 50.0% | |
| TATGCCGGAAACCTTGGTTG+GGG | + | chr7.2:7532738-7532757 | MS.gene23088:CDS | 50.0% | |
| TCTATGCCGGAAACCTTGGT+TGG | + | chr7.2:7532736-7532755 | MS.gene23088:CDS | 50.0% | |
| TTTGAACGCCATGAACGGTG+TGG | + | chr7.2:7532902-7532921 | MS.gene23088:CDS | 50.0% | |
| ! | CACCTCCTTTTGGCACTTCT+GGG | - | chr7.2:7532650-7532669 | None:intergenic | 50.0% |
| ! | GCTGCGACACAACAGTCTTT+TGG | - | chr7.2:7532373-7532392 | None:intergenic | 50.0% |
| ! | GCTGCTTTGAACGCCATGAA+CGG | + | chr7.2:7532897-7532916 | MS.gene23088:CDS | 50.0% |
| ! | GGTTCTGATTGAGGCCACAT+CGG | - | chr7.2:7532332-7532351 | None:intergenic | 50.0% |
| ! | TCACCTCCTTTTGGCACTTC+TGG | - | chr7.2:7532651-7532670 | None:intergenic | 50.0% |
| !! | AGTTGGTGGTAGGAGTGCTA+AGG | + | chr7.2:7532617-7532636 | MS.gene23088:CDS | 50.0% |
| !! | GTTTTCAGGAGGTTCAAGGC+CGG | + | chr7.2:7533027-7533046 | MS.gene23088:intron | 50.0% |
| !! | TTCCCAGAAGTGCCAAAAGG+AGG | + | chr7.2:7532645-7532664 | MS.gene23088:CDS | 50.0% |
| ACCTTAGCACCCAGTAAGCC+TGG | - | chr7.2:7532804-7532823 | None:intergenic | 55.0% | |
| CAGTCCCCAACCAAGGTTTC+CGG | - | chr7.2:7532745-7532764 | None:intergenic | 55.0% | |
| CCGGCCGTTGCGATTGAATT+TGG | + | chr7.2:7533046-7533065 | MS.gene23088:CDS | 55.0% | |
| GAGAGTTCAGTCCCCAACCA+AGG | - | chr7.2:7532752-7532771 | None:intergenic | 55.0% | |
| GATGCCTTTGCTGAACAGCC+AGG | + | chr7.2:7532783-7532802 | MS.gene23088:CDS | 55.0% | |
| GCTGAACAGCCAGGCTTACT+GGG | + | chr7.2:7532792-7532811 | MS.gene23088:CDS | 55.0% | |
| GGTCTACAGCCGCAATATGG+TGG | - | chr7.2:7532395-7532414 | None:intergenic | 55.0% | |
| GTGTCGCAGCCACCATATTG+CGG | + | chr7.2:7532383-7532402 | MS.gene23088:intron | 55.0% | |
| TGCTGAACAGCCAGGCTTAC+TGG | + | chr7.2:7532791-7532810 | MS.gene23088:CDS | 55.0% | |
| TGGTTGGGGACTGAACTCTC+AGG | + | chr7.2:7532752-7532771 | MS.gene23088:CDS | 55.0% | |
| GCAGTCAAATGCGGCCGATG+TGG | + | chr7.2:7532315-7532334 | MS.gene23088:intron | 60.0% | |
| GCCAGGCTTACTGGGTGCTA+AGG | + | chr7.2:7532800-7532819 | MS.gene23088:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 7531968 | 7533163 | 7531968 | ID=MS.gene23088 |
| chr7.2 | mRNA | 7531968 | 7533163 | 7531968 | ID=MS.gene23088.t1;Parent=MS.gene23088 |
| chr7.2 | exon | 7531968 | 7532018 | 7531968 | ID=MS.gene23088.t1.exon1;Parent=MS.gene23088.t1 |
| chr7.2 | CDS | 7531968 | 7532018 | 7531968 | ID=cds.MS.gene23088.t1;Parent=MS.gene23088.t1 |
| chr7.2 | exon | 7532615 | 7532923 | 7532615 | ID=MS.gene23088.t1.exon2;Parent=MS.gene23088.t1 |
| chr7.2 | CDS | 7532615 | 7532923 | 7532615 | ID=cds.MS.gene23088.t1;Parent=MS.gene23088.t1 |
| chr7.2 | exon | 7533035 | 7533163 | 7533035 | ID=MS.gene23088.t1.exon3;Parent=MS.gene23088.t1 |
| chr7.2 | CDS | 7533035 | 7533163 | 7533035 | ID=cds.MS.gene23088.t1;Parent=MS.gene23088.t1 |
| Gene Sequence |
| Protein sequence |
