Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28067.t1 | XP_013446796.1 | 95.8 | 168 | 7 | 0 | 1 | 168 | 1 | 168 | 6.40E-65 | 256.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28067.t1 | Q9FJP3 | 60.5 | 147 | 53 | 2 | 1 | 142 | 1 | 147 | 8.3e-37 | 154.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28067.t1 | A0A072TVC3 | 95.8 | 168 | 7 | 0 | 1 | 168 | 1 | 168 | 4.6e-65 | 256.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene28067 | 0.829247 | 5.73E-55 | -1.69E-46 |
| MS.gene049284 | MS.gene28067 | 0.82877 | 7.47E-55 | -1.69E-46 |
| MS.gene049346 | MS.gene28067 | 0.826452 | 2.69E-54 | -1.69E-46 |
| MS.gene049351 | MS.gene28067 | 0.883498 | 4.26E-71 | -1.69E-46 |
| MS.gene049389 | MS.gene28067 | 0.846225 | 2.48E-59 | -1.69E-46 |
| MS.gene049427 | MS.gene28067 | 0.835915 | 1.27E-56 | -1.69E-46 |
| MS.gene049491 | MS.gene28067 | 0.872525 | 2.97E-67 | -1.69E-46 |
| MS.gene049599 | MS.gene28067 | -0.802439 | 5.61E-49 | -1.69E-46 |
| MS.gene049614 | MS.gene28067 | 0.828478 | 8.79E-55 | -1.69E-46 |
| MS.gene049661 | MS.gene28067 | 0.860856 | 1.54E-63 | -1.69E-46 |
| MS.gene049662 | MS.gene28067 | 0.856661 | 2.77E-62 | -1.69E-46 |
| MS.gene049758 | MS.gene28067 | 0.910356 | 2.05E-82 | -1.69E-46 |
| MS.gene049760 | MS.gene28067 | 0.828459 | 8.88E-55 | -1.69E-46 |
| MS.gene049910 | MS.gene28067 | 0.81712 | 3.89E-52 | -1.69E-46 |
| MS.gene050076 | MS.gene28067 | 0.895017 | 1.43E-75 | -1.69E-46 |
| MS.gene050099 | MS.gene28067 | 0.882903 | 7.05E-71 | -1.69E-46 |
| MS.gene050128 | MS.gene28067 | 0.862302 | 5.58E-64 | -1.69E-46 |
| MS.gene050301 | MS.gene28067 | 0.918664 | 1.18E-86 | -1.69E-46 |
| MS.gene050397 | MS.gene28067 | 0.889962 | 1.51E-73 | -1.69E-46 |
| MS.gene050404 | MS.gene28067 | 0.820308 | 7.35E-53 | -1.69E-46 |
| MS.gene050406 | MS.gene28067 | 0.839781 | 1.29E-57 | -1.69E-46 |
| MS.gene050432 | MS.gene28067 | 0.864071 | 1.58E-64 | -1.69E-46 |
| MS.gene050464 | MS.gene28067 | 0.886887 | 2.31E-72 | -1.69E-46 |
| MS.gene050529 | MS.gene28067 | 0.883799 | 3.30E-71 | -1.69E-46 |
| MS.gene05053 | MS.gene28067 | 0.814299 | 1.65E-51 | -1.69E-46 |
| MS.gene050558 | MS.gene28067 | 0.842626 | 2.31E-58 | -1.69E-46 |
| MS.gene050650 | MS.gene28067 | 0.809724 | 1.64E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene28067 | 0.834524 | 2.85E-56 | -1.69E-46 |
| MS.gene050767 | MS.gene28067 | 0.869809 | 2.34E-66 | -1.69E-46 |
| MS.gene050770 | MS.gene28067 | 0.871416 | 6.95E-67 | -1.69E-46 |
| MS.gene050783 | MS.gene28067 | 0.827093 | 1.89E-54 | -1.69E-46 |
| MS.gene050812 | MS.gene28067 | 0.813697 | 2.24E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene28067 | 0.931154 | 5.74E-94 | -1.69E-46 |
| MS.gene05105 | MS.gene28067 | 0.812583 | 3.94E-51 | -1.69E-46 |
| MS.gene051255 | MS.gene28067 | 0.804234 | 2.38E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene28067 | 0.809879 | 1.52E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene28067 | 0.898711 | 4.06E-77 | -1.69E-46 |
| MS.gene051487 | MS.gene28067 | 0.801507 | 8.71E-49 | -1.69E-46 |
| MS.gene051582 | MS.gene28067 | 0.846086 | 2.71E-59 | -1.69E-46 |
| MS.gene051662 | MS.gene28067 | 0.866402 | 2.93E-65 | -1.69E-46 |
| MS.gene051663 | MS.gene28067 | 0.879704 | 1.00E-69 | -1.69E-46 |
| MS.gene051860 | MS.gene28067 | 0.855362 | 6.64E-62 | -1.69E-46 |
| MS.gene051877 | MS.gene28067 | 0.852048 | 5.96E-61 | -1.69E-46 |
| MS.gene052077 | MS.gene28067 | 0.800619 | 1.32E-48 | -1.69E-46 |
| MS.gene052078 | MS.gene28067 | 0.915848 | 3.61E-85 | -1.69E-46 |
| MS.gene052178 | MS.gene28067 | 0.908217 | 2.18E-81 | -1.69E-46 |
| MS.gene052188 | MS.gene28067 | 0.858023 | 1.10E-62 | -1.69E-46 |
| MS.gene052207 | MS.gene28067 | 0.843141 | 1.68E-58 | -1.69E-46 |
| MS.gene052253 | MS.gene28067 | 0.829359 | 5.38E-55 | -1.69E-46 |
| MS.gene052287 | MS.gene28067 | 0.827285 | 1.70E-54 | -1.69E-46 |
| MS.gene052290 | MS.gene28067 | 0.829814 | 4.17E-55 | -1.69E-46 |
| MS.gene052310 | MS.gene28067 | 0.900623 | 6.09E-78 | -1.69E-46 |
| MS.gene052322 | MS.gene28067 | 0.828938 | 6.81E-55 | -1.69E-46 |
| MS.gene052326 | MS.gene28067 | 0.902793 | 6.74E-79 | -1.69E-46 |
| MS.gene052340 | MS.gene28067 | 0.865988 | 3.96E-65 | -1.69E-46 |
| MS.gene052344 | MS.gene28067 | -0.828791 | 7.39E-55 | -1.69E-46 |
| MS.gene052481 | MS.gene28067 | 0.808471 | 3.05E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene28067 | 0.80238 | 5.77E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene28067 | 0.837807 | 4.18E-57 | -1.69E-46 |
| MS.gene053103 | MS.gene28067 | 0.822221 | 2.66E-53 | -1.69E-46 |
| MS.gene053209 | MS.gene28067 | 0.862756 | 4.05E-64 | -1.69E-46 |
| MS.gene053322 | MS.gene28067 | 0.864486 | 1.17E-64 | -1.69E-46 |
| MS.gene053557 | MS.gene28067 | 0.875711 | 2.48E-68 | -1.69E-46 |
| MS.gene053836 | MS.gene28067 | 0.91357 | 5.28E-84 | -1.69E-46 |
| MS.gene053907 | MS.gene28067 | 0.850139 | 2.06E-60 | -1.69E-46 |
| MS.gene053928 | MS.gene28067 | 0.833475 | 5.22E-56 | -1.69E-46 |
| MS.gene053971 | MS.gene28067 | 0.839122 | 1.91E-57 | -1.69E-46 |
| MS.gene054010 | MS.gene28067 | 0.823348 | 1.45E-53 | -1.69E-46 |
| MS.gene054011 | MS.gene28067 | 0.843604 | 1.27E-58 | -1.69E-46 |
| MS.gene054012 | MS.gene28067 | 0.828777 | 7.45E-55 | -1.69E-46 |
| MS.gene054013 | MS.gene28067 | 0.826931 | 2.07E-54 | -1.69E-46 |
| MS.gene054123 | MS.gene28067 | 0.871683 | 5.67E-67 | -1.69E-46 |
| MS.gene054214 | MS.gene28067 | 0.821218 | 4.54E-53 | -1.69E-46 |
| MS.gene054376 | MS.gene28067 | 0.888474 | 5.72E-73 | -1.69E-46 |
| MS.gene054473 | MS.gene28067 | 0.836957 | 6.90E-57 | -1.69E-46 |
| MS.gene05455 | MS.gene28067 | 0.896337 | 4.07E-76 | -1.69E-46 |
| MS.gene054618 | MS.gene28067 | 0.814362 | 1.60E-51 | -1.69E-46 |
| MS.gene054802 | MS.gene28067 | 0.879233 | 1.47E-69 | -1.69E-46 |
| MS.gene054803 | MS.gene28067 | 0.874409 | 6.91E-68 | -1.69E-46 |
| MS.gene054804 | MS.gene28067 | 0.879004 | 1.77E-69 | -1.69E-46 |
| MS.gene054955 | MS.gene28067 | 0.830726 | 2.50E-55 | -1.69E-46 |
| MS.gene054983 | MS.gene28067 | 0.807792 | 4.25E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene28067 | 0.861017 | 1.38E-63 | -1.69E-46 |
| MS.gene055254 | MS.gene28067 | 0.850878 | 1.28E-60 | -1.69E-46 |
| MS.gene055277 | MS.gene28067 | 0.939343 | 1.49E-99 | -1.69E-46 |
| MS.gene055303 | MS.gene28067 | 0.82502 | 5.88E-54 | -1.69E-46 |
| MS.gene055390 | MS.gene28067 | 0.914166 | 2.64E-84 | -1.69E-46 |
| MS.gene055397 | MS.gene28067 | 0.823776 | 1.15E-53 | -1.69E-46 |
| MS.gene055412 | MS.gene28067 | 0.813011 | 3.18E-51 | -1.69E-46 |
| MS.gene055422 | MS.gene28067 | 0.932543 | 7.27E-95 | -1.69E-46 |
| MS.gene055428 | MS.gene28067 | 0.906945 | 8.62E-81 | -1.69E-46 |
| MS.gene055499 | MS.gene28067 | 0.831423 | 1.68E-55 | -1.69E-46 |
| MS.gene055533 | MS.gene28067 | 0.812579 | 3.95E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene28067 | 0.815128 | 1.08E-51 | -1.69E-46 |
| MS.gene055604 | MS.gene28067 | 0.857944 | 1.16E-62 | -1.69E-46 |
| MS.gene055647 | MS.gene28067 | 0.814649 | 1.38E-51 | -1.69E-46 |
| MS.gene055712 | MS.gene28067 | 0.872521 | 2.98E-67 | -1.69E-46 |
| MS.gene055896 | MS.gene28067 | 0.855537 | 5.90E-62 | -1.69E-46 |
| MS.gene05592 | MS.gene28067 | 0.807337 | 5.31E-50 | -1.69E-46 |
| MS.gene055930 | MS.gene28067 | 0.809533 | 1.81E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene28067 | 0.884762 | 1.45E-71 | -1.69E-46 |
| MS.gene056314 | MS.gene28067 | 0.810286 | 1.24E-50 | -1.69E-46 |
| MS.gene056407 | MS.gene28067 | 0.885756 | 6.18E-72 | -1.69E-46 |
| MS.gene056410 | MS.gene28067 | 0.887057 | 1.99E-72 | -1.69E-46 |
| MS.gene056451 | MS.gene28067 | 0.824257 | 8.90E-54 | -1.69E-46 |
| MS.gene056452 | MS.gene28067 | 0.816283 | 5.99E-52 | -1.69E-46 |
| MS.gene056609 | MS.gene28067 | 0.867168 | 1.67E-65 | -1.69E-46 |
| MS.gene056612 | MS.gene28067 | 0.91441 | 1.98E-84 | -1.69E-46 |
| MS.gene056772 | MS.gene28067 | 0.801676 | 8.05E-49 | -1.69E-46 |
| MS.gene056796 | MS.gene28067 | 0.851278 | 9.85E-61 | -1.69E-46 |
| MS.gene056875 | MS.gene28067 | 0.803758 | 2.99E-49 | -1.69E-46 |
| MS.gene056899 | MS.gene28067 | -0.815734 | 7.94E-52 | -1.69E-46 |
| MS.gene056902 | MS.gene28067 | 0.821657 | 3.59E-53 | -1.69E-46 |
| MS.gene056931 | MS.gene28067 | 0.837339 | 5.51E-57 | -1.69E-46 |
| MS.gene056933 | MS.gene28067 | 0.833252 | 5.93E-56 | -1.69E-46 |
| MS.gene056935 | MS.gene28067 | 0.83055 | 2.76E-55 | -1.69E-46 |
| MS.gene057011 | MS.gene28067 | 0.84618 | 2.55E-59 | -1.69E-46 |
| MS.gene05702 | MS.gene28067 | 0.876532 | 1.30E-68 | -1.69E-46 |
| MS.gene057121 | MS.gene28067 | 0.873525 | 1.37E-67 | -1.69E-46 |
| MS.gene057123 | MS.gene28067 | 0.846555 | 2.02E-59 | -1.69E-46 |
| MS.gene057129 | MS.gene28067 | 0.828093 | 1.09E-54 | -1.69E-46 |
| MS.gene057146 | MS.gene28067 | 0.823547 | 1.31E-53 | -1.69E-46 |
| MS.gene057245 | MS.gene28067 | 0.861629 | 8.97E-64 | -1.69E-46 |
| MS.gene057260 | MS.gene28067 | 0.822213 | 2.67E-53 | -1.69E-46 |
| MS.gene057295 | MS.gene28067 | 0.877588 | 5.57E-69 | -1.69E-46 |
| MS.gene05733 | MS.gene28067 | 0.847598 | 1.04E-59 | -1.69E-46 |
| MS.gene057439 | MS.gene28067 | 0.894155 | 3.22E-75 | -1.69E-46 |
| MS.gene057448 | MS.gene28067 | 0.85045 | 1.69E-60 | -1.69E-46 |
| MS.gene057449 | MS.gene28067 | 0.839136 | 1.90E-57 | -1.69E-46 |
| MS.gene057450 | MS.gene28067 | 0.86097 | 1.42E-63 | -1.69E-46 |
| MS.gene057469 | MS.gene28067 | 0.804628 | 1.97E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene28067 | 0.806682 | 7.31E-50 | -1.69E-46 |
| MS.gene057779 | MS.gene28067 | 0.819542 | 1.10E-52 | -1.69E-46 |
| MS.gene057796 | MS.gene28067 | 0.807979 | 3.88E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene28067 | 0.899945 | 1.20E-77 | -1.69E-46 |
| MS.gene058019 | MS.gene28067 | 0.812862 | 3.42E-51 | -1.69E-46 |
| MS.gene058082 | MS.gene28067 | 0.83755 | 4.86E-57 | -1.69E-46 |
| MS.gene05811 | MS.gene28067 | 0.912788 | 1.30E-83 | -1.69E-46 |
| MS.gene058142 | MS.gene28067 | 0.824379 | 8.33E-54 | -1.69E-46 |
| MS.gene058233 | MS.gene28067 | 0.872703 | 2.59E-67 | -1.69E-46 |
| MS.gene058276 | MS.gene28067 | 0.843992 | 9.96E-59 | -1.69E-46 |
| MS.gene058293 | MS.gene28067 | 0.901829 | 1.80E-78 | -1.69E-46 |
| MS.gene058365 | MS.gene28067 | 0.81639 | 5.67E-52 | -1.69E-46 |
| MS.gene05842 | MS.gene28067 | 0.808979 | 2.37E-50 | -1.69E-46 |
| MS.gene058484 | MS.gene28067 | 0.807329 | 5.33E-50 | -1.69E-46 |
| MS.gene058537 | MS.gene28067 | -0.811292 | 7.53E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene28067 | 0.934326 | 4.81E-96 | -1.69E-46 |
| MS.gene058787 | MS.gene28067 | 0.8517 | 7.48E-61 | -1.69E-46 |
| MS.gene058845 | MS.gene28067 | 0.862344 | 5.42E-64 | -1.69E-46 |
| MS.gene05886 | MS.gene28067 | 0.814167 | 1.77E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene28067 | 0.83779 | 4.22E-57 | -1.69E-46 |
| MS.gene058993 | MS.gene28067 | 0.812747 | 3.63E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene28067 | 0.918473 | 1.49E-86 | -1.69E-46 |
| MS.gene059228 | MS.gene28067 | 0.850675 | 1.46E-60 | -1.69E-46 |
| MS.gene059294 | MS.gene28067 | 0.848173 | 7.26E-60 | -1.69E-46 |
| MS.gene059326 | MS.gene28067 | 0.890314 | 1.10E-73 | -1.69E-46 |
| MS.gene059342 | MS.gene28067 | 0.838008 | 3.71E-57 | -1.69E-46 |
| MS.gene059518 | MS.gene28067 | 0.89449 | 2.35E-75 | -1.69E-46 |
| MS.gene059536 | MS.gene28067 | 0.857475 | 1.59E-62 | -1.69E-46 |
| MS.gene059597 | MS.gene28067 | 0.891595 | 3.44E-74 | -1.69E-46 |
| MS.gene05959 | MS.gene28067 | 0.851083 | 1.12E-60 | -1.69E-46 |
| MS.gene059676 | MS.gene28067 | 0.889605 | 2.09E-73 | -1.69E-46 |
| MS.gene059688 | MS.gene28067 | 0.871528 | 6.38E-67 | -1.69E-46 |
| MS.gene059692 | MS.gene28067 | 0.884676 | 1.56E-71 | -1.69E-46 |
| MS.gene059695 | MS.gene28067 | 0.880366 | 5.82E-70 | -1.69E-46 |
| MS.gene059708 | MS.gene28067 | 0.841864 | 3.67E-58 | -1.69E-46 |
| MS.gene05984 | MS.gene28067 | 0.88067 | 4.53E-70 | -1.69E-46 |
| MS.gene059894 | MS.gene28067 | 0.910358 | 2.05E-82 | -1.69E-46 |
| MS.gene059899 | MS.gene28067 | 0.814175 | 1.76E-51 | -1.69E-46 |
| MS.gene059960 | MS.gene28067 | 0.867887 | 9.83E-66 | -1.69E-46 |
| MS.gene059974 | MS.gene28067 | 0.839904 | 1.20E-57 | -1.69E-46 |
| MS.gene060005 | MS.gene28067 | 0.864004 | 1.66E-64 | -1.69E-46 |
| MS.gene06037 | MS.gene28067 | 0.890225 | 1.19E-73 | -1.69E-46 |
| MS.gene060403 | MS.gene28067 | 0.835197 | 1.93E-56 | -1.69E-46 |
| MS.gene060407 | MS.gene28067 | 0.827249 | 1.74E-54 | -1.69E-46 |
| MS.gene060476 | MS.gene28067 | 0.834951 | 2.23E-56 | -1.69E-46 |
| MS.gene060559 | MS.gene28067 | 0.847432 | 1.16E-59 | -1.69E-46 |
| MS.gene060804 | MS.gene28067 | 0.831341 | 1.76E-55 | -1.69E-46 |
| MS.gene060818 | MS.gene28067 | 0.808401 | 3.15E-50 | -1.69E-46 |
| MS.gene06090 | MS.gene28067 | 0.829909 | 3.95E-55 | -1.69E-46 |
| MS.gene061041 | MS.gene28067 | 0.804459 | 2.14E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene28067 | 0.913787 | 4.10E-84 | -1.69E-46 |
| MS.gene061051 | MS.gene28067 | -0.876765 | 1.08E-68 | -1.69E-46 |
| MS.gene061112 | MS.gene28067 | 0.832338 | 1.00E-55 | -1.69E-46 |
| MS.gene061154 | MS.gene28067 | 0.805848 | 1.10E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene28067 | 0.855843 | 4.81E-62 | -1.69E-46 |
| MS.gene061265 | MS.gene28067 | 0.825545 | 4.42E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28067.t1 | MTR_8g090185 | 95.425 | 153 | 7 | 0 | 1 | 153 | 1 | 153 | 1.38e-89 | 259 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28067.t1 | AT5G65220 | 60.510 | 157 | 57 | 2 | 1 | 152 | 1 | 157 | 3.15e-56 | 174 |
Find 37 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCATCTTTAGTGAAGCTT+CGG | 0.343778 | 4.4:+10796119 | MS.gene28067:CDS |
| CGAAGAGGTTGTTGACCTTA+AGG | 0.368840 | 4.4:+10793610 | MS.gene28067:CDS |
| AGAGAGATCGAGGAGGGTAT+TGG | 0.373075 | 4.4:+10796037 | MS.gene28067:CDS |
| GAAGAGGTTGTTGACCTTAA+GGG | 0.407443 | 4.4:+10793611 | MS.gene28067:CDS |
| AACCTCTTCGTTGATTTGTT+CGG | 0.413592 | 4.4:-10793597 | None:intergenic |
| TCCATCTTTAGTGAAGCTTC+GGG | 0.422468 | 4.4:+10796120 | MS.gene28067:CDS |
| CAATTCAAAACCTCCTTCAA+TGG | 0.450472 | 4.4:+10793455 | MS.gene28067:CDS |
| GCTGGAATTGTGCACGTGTT+TGG | 0.452104 | 4.4:-10793494 | None:intergenic |
| AGAAGCCGCTGAAGCTGAAA+AGG | 0.454847 | 4.4:+10796159 | MS.gene28067:CDS |
| TCGAGGAGGGTATTGGTAAG+AGG | 0.464624 | 4.4:+10796044 | MS.gene28067:CDS |
| TCCCGAAGCTTCACTAAAGA+TGG | 0.465433 | 4.4:-10796121 | None:intergenic |
| GAAGCGGTGTGTTTCGTCGC+TGG | 0.470689 | 4.4:-10793512 | None:intergenic |
| CTCTTCGTTGATTTGTTCGG+TGG | 0.475609 | 4.4:-10793594 | None:intergenic |
| TTTAGTGAAGCTTCGGGAGG+AGG | 0.477310 | 4.4:+10796126 | MS.gene28067:CDS |
| TTCGGTCTCAGTTGTGATGA+TGG | 0.497091 | 4.4:+10793532 | MS.gene28067:CDS |
| GCATGAGCAACTCTCCCTTA+AGG | 0.500570 | 4.4:-10793625 | None:intergenic |
| ACGCATGCGACGGAAATCAC+TGG | 0.508419 | 4.4:-10793684 | None:intergenic |
| GAAAGTGTTGAAGAAGAAGA+AGG | 0.513832 | 4.4:-10793413 | None:intergenic |
| AGAAGAAGAAGGTGAAGTAA+CGG | 0.515793 | 4.4:-10793402 | None:intergenic |
| CATTACGAGCGGATTTCTGA+AGG | 0.525516 | 4.4:-10793652 | None:intergenic |
| AGCGACGAAACACACCGCTT+CGG | 0.532669 | 4.4:+10793514 | MS.gene28067:CDS |
| TCGCTTGCTTACTGTAAAGC+GGG | 0.534202 | 4.4:+10796012 | MS.gene28067:CDS |
| ACGTAGACGAATGCCATTGA+AGG | 0.534298 | 4.4:-10793468 | None:intergenic |
| TTTCCGTCGCATGCGTAAGA+CGG | 0.562303 | 4.4:+10793691 | MS.gene28067:CDS |
| CTCGCTTGCTTACTGTAAAG+CGG | 0.564676 | 4.4:+10796011 | MS.gene28067:CDS |
| AGCTTCACTAAAGATGGAGG+TGG | 0.573712 | 4.4:-10796115 | None:intergenic |
| TAGACGAATGCCATTGAAGG+AGG | 0.601615 | 4.4:-10793465 | None:intergenic |
| ATCTTTAGTGAAGCTTCGGG+AGG | 0.606878 | 4.4:+10796123 | MS.gene28067:CDS |
| CGGGAAAGAGAGATCGAGGA+GGG | 0.618037 | 4.4:+10796031 | MS.gene28067:CDS |
| CGAAGCTTCACTAAAGATGG+AGG | 0.634671 | 4.4:-10796118 | None:intergenic |
| CACCGAACAAATCAACGAAG+AGG | 0.638523 | 4.4:+10793595 | MS.gene28067:CDS |
| AAAGCGGGAAAGAGAGATCG+AGG | 0.640382 | 4.4:+10796027 | MS.gene28067:CDS |
| ATACCGTCTTACGCATGCGA+CGG | 0.651580 | 4.4:-10793694 | None:intergenic |
| GGACTTAAACTCATTACGAG+CGG | 0.659914 | 4.4:-10793663 | None:intergenic |
| GCGGGAAAGAGAGATCGAGG+AGG | 0.693334 | 4.4:+10796030 | MS.gene28067:CDS |
| CATCACAACTGAGACCGAAG+CGG | 0.693580 | 4.4:-10793528 | None:intergenic |
| AAGAAGGTGAAGTAACGGAG+AGG | 0.716426 | 4.4:-10793397 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAACTAAAAATAAATG+GGG | - | chr4.4:10795889-10795908 | None:intergenic | 10.0% |
| !! | AAAAAAGCAATATAATGAAA+AGG | - | chr4.4:10795108-10795127 | None:intergenic | 15.0% |
| !! | TTAAAACTAAAAATAAATGG+GGG | - | chr4.4:10795888-10795907 | None:intergenic | 15.0% |
| !!! | ATCTGAAGTTATTATTATTA+GGG | - | chr4.4:10795916-10795935 | None:intergenic | 15.0% |
| !!! | ATTTGCTTAATTAAATTTTG+AGG | + | chr4.4:10793780-10793799 | MS.gene28067:intron | 15.0% |
| !! | ACAATAAAATTCAATTGTTG+TGG | + | chr4.4:10795187-10795206 | MS.gene28067:intron | 20.0% |
| !! | ACAATATTCAAAATTGTCAA+GGG | + | chr4.4:10794143-10794162 | MS.gene28067:intron | 20.0% |
| !! | ATAATCTAATCCAATGTAAA+CGG | + | chr4.4:10794771-10794790 | MS.gene28067:intron | 20.0% |
| !! | ATCAGAACTGAAATTTAAAT+TGG | + | chr4.4:10795269-10795288 | MS.gene28067:intron | 20.0% |
| !! | TTAATACATTAGTAGAGTTA+GGG | + | chr4.4:10793853-10793872 | MS.gene28067:intron | 20.0% |
| !!! | ACAACAATTGAATTTTATTG+TGG | - | chr4.4:10795188-10795207 | None:intergenic | 20.0% |
| !!! | CATCTGAAGTTATTATTATT+AGG | - | chr4.4:10795917-10795936 | None:intergenic | 20.0% |
| !!! | CTAATTTTTTTTTTCCGTTT+CGG | - | chr4.4:10795380-10795399 | None:intergenic | 20.0% |
| !!! | TATCTTTTACTTTAGTTGTT+TGG | + | chr4.4:10794944-10794963 | MS.gene28067:intron | 20.0% |
| !!! | TCAATTCAATTTTTATTGGT+GGG | - | chr4.4:10795725-10795744 | None:intergenic | 20.0% |
| !!! | TCTTAAGTTTGAATCTTTTA+TGG | + | chr4.4:10794637-10794656 | MS.gene28067:intron | 20.0% |
| ! | AAAAATTGAATTGAGGAGAA+TGG | + | chr4.4:10795731-10795750 | MS.gene28067:intron | 25.0% |
| ! | AAAATTGAATTGAGGAGAAT+GGG | + | chr4.4:10795732-10795751 | MS.gene28067:intron | 25.0% |
| ! | AAACTTAGGGTAAAATTTGA+AGG | + | chr4.4:10794268-10794287 | MS.gene28067:intron | 25.0% |
| ! | AAATGCACACAATAGAAAAA+GGG | + | chr4.4:10795831-10795850 | MS.gene28067:intron | 25.0% |
| ! | AACATCCATGAAAATAGAAA+AGG | - | chr4.4:10795213-10795232 | None:intergenic | 25.0% |
| ! | AACTCTGATAAAATGATGAT+GGG | - | chr4.4:10795697-10795716 | None:intergenic | 25.0% |
| ! | AAGAAGAAAGAAAACTGAAA+AGG | + | chr4.4:10794856-10794875 | MS.gene28067:intron | 25.0% |
| ! | ACACCAAAAATAATGCAAAT+GGG | - | chr4.4:10794238-10794257 | None:intergenic | 25.0% |
| ! | ATACAAATGAGTGTAAGAAT+AGG | - | chr4.4:10795022-10795041 | None:intergenic | 25.0% |
| ! | ATTGTTCTATGGTTATGTTA+GGG | + | chr4.4:10793984-10794003 | MS.gene28067:intron | 25.0% |
| ! | CAATATTCAAAATTGTCAAG+GGG | + | chr4.4:10794144-10794163 | MS.gene28067:intron | 25.0% |
| ! | CACAATATTCAAAATTGTCA+AGG | + | chr4.4:10794142-10794161 | MS.gene28067:intron | 25.0% |
| ! | CACCAATAAAAATTGAATTG+AGG | + | chr4.4:10795724-10795743 | MS.gene28067:intron | 25.0% |
| ! | CGAAACGGAAAAAAAAAATT+AGG | + | chr4.4:10795378-10795397 | MS.gene28067:intron | 25.0% |
| ! | CTCTACTAATGTATTAAGAT+TGG | - | chr4.4:10793850-10793869 | None:intergenic | 25.0% |
| ! | CTTAATACATTAGTAGAGTT+AGG | + | chr4.4:10793852-10793871 | MS.gene28067:intron | 25.0% |
| ! | GAAATATTGCTATGTTAGAA+TGG | + | chr4.4:10794172-10794191 | MS.gene28067:intron | 25.0% |
| ! | GAAATGAACATTGAAATGAA+AGG | + | chr4.4:10794319-10794338 | MS.gene28067:intron | 25.0% |
| ! | TAATACATTAGTAGAGTTAG+GGG | + | chr4.4:10793854-10793873 | MS.gene28067:intron | 25.0% |
| ! | TGTCTATTATACCAAACTTA+GGG | + | chr4.4:10794255-10794274 | MS.gene28067:intron | 25.0% |
| ! | TGTGAAATTAGGAATGAATA+GGG | + | chr4.4:10793887-10793906 | MS.gene28067:intron | 25.0% |
| ! | TTGTAATTGTCATTGTTCTA+TGG | + | chr4.4:10793973-10793992 | MS.gene28067:intron | 25.0% |
| !! | CTCAATTCAATTTTTATTGG+TGG | - | chr4.4:10795726-10795745 | None:intergenic | 25.0% |
| !! | CTCCTCAATTCAATTTTTAT+TGG | - | chr4.4:10795729-10795748 | None:intergenic | 25.0% |
| !! | TATTAGCACTTGTTAACAAA+TGG | - | chr4.4:10794720-10794739 | None:intergenic | 25.0% |
| !! | TTCAAATTTTACCCTAAGTT+TGG | - | chr4.4:10794269-10794288 | None:intergenic | 25.0% |
| !! | TTTAGAATGTTTAGATTCCA+TGG | + | chr4.4:10795798-10795817 | MS.gene28067:intron | 25.0% |
| !! | TTTCAGTTTTCTTTCTTCTT+TGG | - | chr4.4:10794856-10794875 | None:intergenic | 25.0% |
| !!! | GTTTTGAATTGTAATGGTTT+TGG | - | chr4.4:10793446-10793465 | None:intergenic | 25.0% |
| AAACTAAAAATAAATGGGGG+TGG | - | chr4.4:10795885-10795904 | None:intergenic | 30.0% | |
| AAAGATTCAAACTTAAGACC+CGG | - | chr4.4:10794635-10794654 | None:intergenic | 30.0% | |
| AAATAACTGAACTGAAAACC+AGG | + | chr4.4:10794794-10794813 | MS.gene28067:intron | 30.0% | |
| AATGCACACAATAGAAAAAG+GGG | + | chr4.4:10795832-10795851 | MS.gene28067:intron | 30.0% | |
| ACATAGATTAAATCCATTGC+CGG | + | chr4.4:10794613-10794632 | MS.gene28067:intron | 30.0% | |
| ACTGAAACAAAGAATAAAGG+TGG | - | chr4.4:10795085-10795104 | None:intergenic | 30.0% | |
| AGGACTGAAACAAAGAATAA+AGG | - | chr4.4:10795088-10795107 | None:intergenic | 30.0% | |
| AGGAGATTAATCTATTATGC+TGG | - | chr4.4:10795561-10795580 | None:intergenic | 30.0% | |
| ATAGTAAAGCAAACTGAAGT+AGG | - | chr4.4:10795620-10795639 | None:intergenic | 30.0% | |
| ATGTTTAGATTCCATGGTAA+AGG | + | chr4.4:10795804-10795823 | MS.gene28067:intron | 30.0% | |
| ATTGAAATTGAACTGAAACC+AGG | - | chr4.4:10794552-10794571 | None:intergenic | 30.0% | |
| ATTTCAATCAACCAATACGA+TGG | + | chr4.4:10794564-10794583 | MS.gene28067:intron | 30.0% | |
| CATTGTTCTATGGTTATGTT+AGG | + | chr4.4:10793983-10794002 | MS.gene28067:intron | 30.0% | |
| CCAGAAAGCTTGATAAAAAA+TGG | + | chr4.4:10796071-10796090 | MS.gene28067:CDS | 30.0% | |
| CTGTGAAATTAGGAATGAAT+AGG | + | chr4.4:10793886-10793905 | MS.gene28067:intron | 30.0% | |
| GAAATGCACACAATAGAAAA+AGG | + | chr4.4:10795830-10795849 | MS.gene28067:intron | 30.0% | |
| GAACTCTGATAAAATGATGA+TGG | - | chr4.4:10795698-10795717 | None:intergenic | 30.0% | |
| GACACCAAAAATAATGCAAA+TGG | - | chr4.4:10794239-10794258 | None:intergenic | 30.0% | |
| GTGTCTATTATACCAAACTT+AGG | + | chr4.4:10794254-10794273 | MS.gene28067:intron | 30.0% | |
| GTGTGTAATATGTAAGTCAT+AGG | - | chr4.4:10794125-10794144 | None:intergenic | 30.0% | |
| TAGTTGTTACTCATGTATTG+CGG | + | chr4.4:10794404-10794423 | MS.gene28067:intron | 30.0% | |
| TTGCTATGTTAGAATGGAAA+TGG | + | chr4.4:10794178-10794197 | MS.gene28067:intron | 30.0% | |
| ! | AAACTGAAAAGGTCAAGTTT+TGG | + | chr4.4:10794867-10794886 | MS.gene28067:intron | 30.0% |
| ! | CATCCCATTTGCATTATTTT+TGG | + | chr4.4:10794232-10794251 | MS.gene28067:intron | 30.0% |
| ! | TCAGTTATTTCCGTTTACAT+TGG | - | chr4.4:10794784-10794803 | None:intergenic | 30.0% |
| ! | TGAGTAAATCGTGATTTTGA+TGG | - | chr4.4:10795133-10795152 | None:intergenic | 30.0% |
| ! | TTTTATTGTCCTCTGTTTTG+GGG | - | chr4.4:10794830-10794849 | None:intergenic | 30.0% |
| !! | GTTTTATTGTCCTCTGTTTT+GGG | - | chr4.4:10794831-10794850 | None:intergenic | 30.0% |
| !!! | AAGGAGGTTTTGAATTGTAA+TGG | - | chr4.4:10793452-10793471 | None:intergenic | 30.0% |
| !!! | ACTTTTCAGGTATGGTATTT+CGG | - | chr4.4:10794478-10794497 | None:intergenic | 30.0% |
| !!! | AGTCTTTGGTTTTGTGTATT+TGG | - | chr4.4:10794071-10794090 | None:intergenic | 30.0% |
| !!! | AGTTTTATTGTCCTCTGTTT+TGG | - | chr4.4:10794832-10794851 | None:intergenic | 30.0% |
| !!! | CCATTTTTTATCAAGCTTTC+TGG | - | chr4.4:10796074-10796093 | None:intergenic | 30.0% |
| !!! | TTGTAATGGTTTTGGAAGAA+AGG | - | chr4.4:10793438-10793457 | None:intergenic | 30.0% |
| AAAACACCATACCTGAAATG+GGG | + | chr4.4:10794446-10794465 | MS.gene28067:intron | 35.0% | |
| AAATCACTTGAGCATTTGTG+GGG | - | chr4.4:10795433-10795452 | None:intergenic | 35.0% | |
| AACATTGAAATGAAAGGCCA+AGG | + | chr4.4:10794325-10794344 | MS.gene28067:intron | 35.0% | |
| AATGGAGACGAACATTAATG+TGG | - | chr4.4:10795482-10795501 | None:intergenic | 35.0% | |
| ACAAAACCAAAGACTCACTA+GGG | + | chr4.4:10794076-10794095 | MS.gene28067:intron | 35.0% | |
| ACACTTGTCTACTGTTATCT+GGG | - | chr4.4:10795348-10795367 | None:intergenic | 35.0% | |
| ACATTAATGTTCGTCTCCAT+TGG | + | chr4.4:10795481-10795500 | MS.gene28067:intron | 35.0% | |
| ACATTGAAATGAAAGGCCAA+GGG | + | chr4.4:10794326-10794345 | MS.gene28067:intron | 35.0% | |
| AGAAAACACCATACCTGAAA+TGG | + | chr4.4:10794444-10794463 | MS.gene28067:intron | 35.0% | |
| AGAAGAAGAAGGTGAAGTAA+CGG | - | chr4.4:10793405-10793424 | None:intergenic | 35.0% | |
| AGATAACAGTAGACAAGTGT+AGG | + | chr4.4:10795348-10795367 | MS.gene28067:intron | 35.0% | |
| ATGGAGACGAACATTAATGT+GGG | - | chr4.4:10795481-10795500 | None:intergenic | 35.0% | |
| CAATTCAAAACCTCCTTCAA+TGG | + | chr4.4:10793455-10793474 | MS.gene28067:CDS | 35.0% | |
| CATAGATTAAATCCATTGCC+GGG | + | chr4.4:10794614-10794633 | MS.gene28067:intron | 35.0% | |
| CTAATAGCTAACATAGCTTG+GGG | + | chr4.4:10794734-10794753 | MS.gene28067:intron | 35.0% | |
| GAAAACACCATACCTGAAAT+GGG | + | chr4.4:10794445-10794464 | MS.gene28067:intron | 35.0% | |
| GAAATACCATACCTGAAAAG+TGG | + | chr4.4:10794477-10794496 | MS.gene28067:intron | 35.0% | |
| GAAATCACTTGAGCATTTGT+GGG | - | chr4.4:10795434-10795453 | None:intergenic | 35.0% | |
| GAATGAGAGTCTGTGAAATT+AGG | + | chr4.4:10793876-10793895 | MS.gene28067:intron | 35.0% | |
| GATAACAGTAGACAAGTGTA+GGG | + | chr4.4:10795349-10795368 | MS.gene28067:intron | 35.0% | |
| GCTAATAGCTAACATAGCTT+GGG | + | chr4.4:10794733-10794752 | MS.gene28067:intron | 35.0% | |
| GTAATCATTCACCCAAAAGA+AGG | - | chr4.4:10795970-10795989 | None:intergenic | 35.0% | |
| GTTAACGAATTTGAATCCCT+TGG | - | chr4.4:10794345-10794364 | None:intergenic | 35.0% | |
| TACACTTGTCTACTGTTATC+TGG | - | chr4.4:10795349-10795368 | None:intergenic | 35.0% | |
| TAGAAAGCTTTACCAACAAG+CGG | + | chr4.4:10795941-10795960 | MS.gene28067:intron | 35.0% | |
| TAGAATGGAAATGGAGAGAA+AGG | + | chr4.4:10794187-10794206 | MS.gene28067:intron | 35.0% | |
| TGCAAATGGGATGTAGATAT+AGG | - | chr4.4:10794225-10794244 | None:intergenic | 35.0% | |
| TGCATTTCTTTCCTTTACCA+TGG | - | chr4.4:10795818-10795837 | None:intergenic | 35.0% | |
| TGCTAATAGCTAACATAGCT+TGG | + | chr4.4:10794732-10794751 | MS.gene28067:intron | 35.0% | |
| TGTGTTGCATAAAGTGGAAA+AGG | - | chr4.4:10795650-10795669 | None:intergenic | 35.0% | |
| ! | GACCTAAACTCTAAAGAATG+AGG | - | chr4.4:10794671-10794690 | None:intergenic | 35.0% |
| ! | TGCAGCTAGTTTATGAAGAA+AGG | - | chr4.4:10794923-10794942 | None:intergenic | 35.0% |
| ! | TGTGGCCTTTTCTATTTTCA+TGG | + | chr4.4:10795205-10795224 | MS.gene28067:intron | 35.0% |
| !! | AACCTCTTCGTTGATTTGTT+CGG | - | chr4.4:10793600-10793619 | None:intergenic | 35.0% |
| !! | AAGGCATCAGGATTTTTATC+TGG | + | chr4.4:10794287-10794306 | MS.gene28067:intron | 35.0% |
| !! | ATTTCAGGTATGGTGTTTTC+TGG | - | chr4.4:10794445-10794464 | None:intergenic | 35.0% |
| !! | CTTTAGAGTTTAGGTCTTTG+AGG | + | chr4.4:10794675-10794694 | MS.gene28067:intron | 35.0% |
| !! | GAAAGTGTTGAAGAAGAAGA+AGG | - | chr4.4:10793416-10793435 | None:intergenic | 35.0% |
| !! | GTCCTCATTCTTTAGAGTTT+AGG | + | chr4.4:10794666-10794685 | MS.gene28067:intron | 35.0% |
| !!! | CTTTTCAGGTATGGTATTTC+GGG | - | chr4.4:10794477-10794496 | None:intergenic | 35.0% |
| AAAAGAAGGATACCGCTTGT+TGG | - | chr4.4:10795956-10795975 | None:intergenic | 40.0% | |
| AAACAGAACACGTGGCAATA+GGG | - | chr4.4:10795530-10795549 | None:intergenic | 40.0% | |
| AAAGAAGCAGTGCATTAGCT+AGG | + | chr4.4:10795774-10795793 | MS.gene28067:intron | 40.0% | |
| AGACGAACATTAATGTGGGA+AGG | - | chr4.4:10795477-10795496 | None:intergenic | 40.0% | |
| AGTGCAAGAGACTTGTGTTT+AGG | + | chr4.4:10794035-10794054 | MS.gene28067:intron | 40.0% | |
| ATACCTGAAAAGTGGAGAGT+GGG | + | chr4.4:10794485-10794504 | MS.gene28067:intron | 40.0% | |
| ATCAGTTGCATGAGTGGAAA+AGG | - | chr4.4:10795241-10795260 | None:intergenic | 40.0% | |
| CACAAAACCAAAGACTCACT+AGG | + | chr4.4:10794075-10794094 | MS.gene28067:intron | 40.0% | |
| CAGAATATCAGTTGCATGAG+TGG | - | chr4.4:10795247-10795266 | None:intergenic | 40.0% | |
| CTCCATCTTTAGTGAAGCTT+CGG | + | chr4.4:10796119-10796138 | MS.gene28067:CDS | 40.0% | |
| GAAGAGGTTGTTGACCTTAA+GGG | + | chr4.4:10793611-10793630 | MS.gene28067:CDS | 40.0% | |
| GAATCACAATATCACCAAGC+TGG | + | chr4.4:10795858-10795877 | MS.gene28067:intron | 40.0% | |
| GGAAATCACTTGAGCATTTG+TGG | - | chr4.4:10795435-10795454 | None:intergenic | 40.0% | |
| GGACTTAAACTCATTACGAG+CGG | - | chr4.4:10793666-10793685 | None:intergenic | 40.0% | |
| GGTTATGTTAGGGAAACAAC+TGG | + | chr4.4:10793994-10794013 | MS.gene28067:intron | 40.0% | |
| GTGCAAGAGACTTGTGTTTA+GGG | + | chr4.4:10794036-10794055 | MS.gene28067:intron | 40.0% | |
| TCCATCTTTAGTGAAGCTTC+GGG | + | chr4.4:10796120-10796139 | MS.gene28067:CDS | 40.0% | |
| TGGAAATGGAGAGAAAGGAA+AGG | + | chr4.4:10794192-10794211 | MS.gene28067:intron | 40.0% | |
| ! | AACAAGCGGTATCCTTCTTT+TGG | + | chr4.4:10795955-10795974 | MS.gene28067:intron | 40.0% |
| ! | ACAAGCGGTATCCTTCTTTT+GGG | + | chr4.4:10795956-10795975 | MS.gene28067:intron | 40.0% |
| ! | GATGATGGCAAAAAGAGAAG+AGG | + | chr4.4:10793547-10793566 | MS.gene28067:CDS | 40.0% |
| ! | GCTTGTTGGTAAAGCTTTCT+AGG | - | chr4.4:10795942-10795961 | None:intergenic | 40.0% |
| !! | GGGTAAAATTTGAAGGCATC+AGG | + | chr4.4:10794275-10794294 | MS.gene28067:intron | 40.0% |
| !! | TCTGGGCTAGAGTTTTCTTT+TGG | - | chr4.4:10795331-10795350 | None:intergenic | 40.0% |
| AAACCAAAGACTCACTAGGG+TGG | + | chr4.4:10794079-10794098 | MS.gene28067:intron | 45.0% | |
| AACAGAACACGTGGCAATAG+GGG | - | chr4.4:10795529-10795548 | None:intergenic | 45.0% | |
| AACCAAAGACTCACTAGGGT+GGG | + | chr4.4:10794080-10794099 | MS.gene28067:intron | 45.0% | |
| AATGTGACCATGCTCACATC+AGG | + | chr4.4:10794976-10794995 | MS.gene28067:intron | 45.0% | |
| AATTGAGGAGAATGGGCACT+AGG | + | chr4.4:10795739-10795758 | MS.gene28067:intron | 45.0% | |
| ACGTAGACGAATGCCATTGA+AGG | - | chr4.4:10793471-10793490 | None:intergenic | 45.0% | |
| AGACATTCCTGATGTGAGCA+TGG | - | chr4.4:10794986-10795005 | None:intergenic | 45.0% | |
| AGCTTCACTAAAGATGGAGG+TGG | - | chr4.4:10796118-10796137 | None:intergenic | 45.0% | |
| AGTGTAGGGATACACCGAAA+CGG | + | chr4.4:10795363-10795382 | MS.gene28067:intron | 45.0% | |
| ATCCTACCAAACAGAACACG+TGG | - | chr4.4:10795538-10795557 | None:intergenic | 45.0% | |
| ATCTTTAGTGAAGCTTCGGG+AGG | + | chr4.4:10796123-10796142 | MS.gene28067:CDS | 45.0% | |
| ATGTGGGAAGGATAGATGTG+TGG | - | chr4.4:10795465-10795484 | None:intergenic | 45.0% | |
| ATTGAGGAGAATGGGCACTA+GGG | + | chr4.4:10795740-10795759 | MS.gene28067:intron | 45.0% | |
| CAAACAGAACACGTGGCAAT+AGG | - | chr4.4:10795531-10795550 | None:intergenic | 45.0% | |
| CACCGAACAAATCAACGAAG+AGG | + | chr4.4:10793595-10793614 | MS.gene28067:CDS | 45.0% | |
| CATAAAGTGGAAAAGGAGCG+CGG | - | chr4.4:10795643-10795662 | None:intergenic | 45.0% | |
| CATACCTGAAAAGTGGAGAG+TGG | + | chr4.4:10794484-10794503 | MS.gene28067:intron | 45.0% | |
| CGAAGAGGTTGTTGACCTTA+AGG | + | chr4.4:10793610-10793629 | MS.gene28067:CDS | 45.0% | |
| CGAAGCTTCACTAAAGATGG+AGG | - | chr4.4:10796121-10796140 | None:intergenic | 45.0% | |
| CTATTGCCACGTGTTCTGTT+TGG | + | chr4.4:10795529-10795548 | MS.gene28067:intron | 45.0% | |
| CTCGCTTGCTTACTGTAAAG+CGG | + | chr4.4:10796011-10796030 | MS.gene28067:CDS | 45.0% | |
| GAGTCTACAAGCCATCGTAT+TGG | - | chr4.4:10794578-10794597 | None:intergenic | 45.0% | |
| GTGGGGTGACTAATAACACA+GGG | - | chr4.4:10795416-10795435 | None:intergenic | 45.0% | |
| TACCTGAAAAGTGGAGAGTG+GGG | + | chr4.4:10794486-10794505 | MS.gene28067:intron | 45.0% | |
| TAGACGAATGCCATTGAAGG+AGG | - | chr4.4:10793468-10793487 | None:intergenic | 45.0% | |
| TCAAACTTAAGACCCGGCAA+TGG | - | chr4.4:10794629-10794648 | None:intergenic | 45.0% | |
| TCCCGAAGCTTCACTAAAGA+TGG | - | chr4.4:10796124-10796143 | None:intergenic | 45.0% | |
| TCCTCCAAGCCATCTTACAA+CGG | - | chr4.4:10794518-10794537 | None:intergenic | 45.0% | |
| TCGCTTGCTTACTGTAAAGC+GGG | + | chr4.4:10796012-10796031 | MS.gene28067:CDS | 45.0% | |
| TGTGGGGTGACTAATAACAC+AGG | - | chr4.4:10795417-10795436 | None:intergenic | 45.0% | |
| TTCGGTCTCAGTTGTGATGA+TGG | + | chr4.4:10793532-10793551 | MS.gene28067:CDS | 45.0% | |
| TTTATGCAACACACCCGCAT+GGG | + | chr4.4:10795657-10795676 | MS.gene28067:intron | 45.0% | |
| ! | AAGAAGGTGAAGTAACGGAG+AGG | - | chr4.4:10793400-10793419 | None:intergenic | 45.0% |
| ! | ACAACTGGCTTCTTATTGCC+TGG | + | chr4.4:10794009-10794028 | MS.gene28067:intron | 45.0% |
| ! | CAGAAGTCTGTCAGTACTGA+AGG | - | chr4.4:10795589-10795608 | None:intergenic | 45.0% |
| ! | CATTACGAGCGGATTTCTGA+AGG | - | chr4.4:10793655-10793674 | None:intergenic | 45.0% |
| ! | GGAATGAATAGGGTGCTAGT+AGG | + | chr4.4:10793897-10793916 | MS.gene28067:intron | 45.0% |
| ! | GGATAGATGTGTGGTGGAAT+AGG | - | chr4.4:10795456-10795475 | None:intergenic | 45.0% |
| ! | TGTCAGTACTGAAGGACTGA+AGG | - | chr4.4:10795581-10795600 | None:intergenic | 45.0% |
| !! | CTCTTCGTTGATTTGTTCGG+TGG | - | chr4.4:10793597-10793616 | None:intergenic | 45.0% |
| !!! | CACTCTCCACTTTTCAGGTA+TGG | - | chr4.4:10794486-10794505 | None:intergenic | 45.0% |
| !!! | TCCTCTGTTTTGGGGTTCTT+CGG | - | chr4.4:10794822-10794841 | None:intergenic | 45.0% |
| !! | ATATTAAAACTAAAAATAAA+TGG | - | chr4.4:10795891-10795910 | None:intergenic | 5.0% |
| !! | TATTAAAACTAAAAATAAAT+GGG | - | chr4.4:10795890-10795909 | None:intergenic | 5.0% |
| AAAGCGGGAAAGAGAGATCG+AGG | + | chr4.4:10796027-10796046 | MS.gene28067:CDS | 50.0% | |
| ACCAAAGACTCACTAGGGTG+GGG | + | chr4.4:10794081-10794100 | MS.gene28067:intron | 50.0% | |
| ACCGAAGAACCCCAAAACAG+AGG | + | chr4.4:10794818-10794837 | MS.gene28067:intron | 50.0% | |
| AGAAGCCGCTGAAGCTGAAA+AGG | + | chr4.4:10796159-10796178 | MS.gene28067:CDS | 50.0% | |
| ATACCGTCTTACGCATGCGA+CGG | - | chr4.4:10793697-10793716 | None:intergenic | 50.0% | |
| ATGGGAGATGCAGGAACCAA+TGG | - | chr4.4:10795500-10795519 | None:intergenic | 50.0% | |
| ATGGGCACTAGGGATTCAGT+AGG | + | chr4.4:10795750-10795769 | MS.gene28067:intron | 50.0% | |
| CATCACAACTGAGACCGAAG+CGG | - | chr4.4:10793531-10793550 | None:intergenic | 50.0% | |
| CTTTATGCAACACACCCGCA+TGG | + | chr4.4:10795656-10795675 | MS.gene28067:intron | 50.0% | |
| GCATGAGCAACTCTCCCTTA+AGG | - | chr4.4:10793628-10793647 | None:intergenic | 50.0% | |
| GCTGGAATTGTGCACGTGTT+TGG | - | chr4.4:10793497-10793516 | None:intergenic | 50.0% | |
| GTATTGCGGCGCATAGCAAT+TGG | + | chr4.4:10794418-10794437 | MS.gene28067:intron | 50.0% | |
| TGCCACGTGTTCTGTTTGGT+AGG | + | chr4.4:10795533-10795552 | MS.gene28067:intron | 50.0% | |
| TGCGGGTGTGTTGCATAAAG+TGG | - | chr4.4:10795656-10795675 | None:intergenic | 50.0% | |
| TGGAGGAGAAGTCATTCTCC+TGG | + | chr4.4:10794531-10794550 | MS.gene28067:intron | 50.0% | |
| TGGGAAGGATAGATGTGTGG+TGG | - | chr4.4:10795462-10795481 | None:intergenic | 50.0% | |
| TTTAGTGAAGCTTCGGGAGG+AGG | + | chr4.4:10796126-10796145 | MS.gene28067:CDS | 50.0% | |
| TTTCCGTCGCATGCGTAAGA+CGG | + | chr4.4:10793691-10793710 | MS.gene28067:CDS | 50.0% | |
| ! | AGAGAGATCGAGGAGGGTAT+TGG | + | chr4.4:10796037-10796056 | MS.gene28067:CDS | 50.0% |
| ! | CAAGTCTCTTGCACTGATCC+AGG | - | chr4.4:10794030-10794049 | None:intergenic | 50.0% |
| ! | GACTCTCCCCATTTCAGGTA+TGG | - | chr4.4:10794455-10794474 | None:intergenic | 50.0% |
| ! | TGCAGCCTTTTCAGCTTCAG+CGG | - | chr4.4:10796167-10796186 | None:intergenic | 50.0% |
| !! | TCGAGGAGGGTATTGGTAAG+AGG | + | chr4.4:10796044-10796063 | MS.gene28067:CDS | 50.0% |
| !!! | TTTTGGGGTTCTTCGGTTCC+TGG | - | chr4.4:10794815-10794834 | None:intergenic | 50.0% |
| AAAAGTGGAGAGTGGGGTGG+TGG | + | chr4.4:10794492-10794511 | MS.gene28067:intron | 55.0% | |
| ACGCATGCGACGGAAATCAC+TGG | - | chr4.4:10793687-10793706 | None:intergenic | 55.0% | |
| AGAACACGTGGCAATAGGGG+AGG | - | chr4.4:10795526-10795545 | None:intergenic | 55.0% | |
| AGCGACGAAACACACCGCTT+CGG | + | chr4.4:10793514-10793533 | MS.gene28067:CDS | 55.0% | |
| CGGGAAAGAGAGATCGAGGA+GGG | + | chr4.4:10796031-10796050 | MS.gene28067:CDS | 55.0% | |
| CTGAAAAGTGGAGAGTGGGG+TGG | + | chr4.4:10794489-10794508 | MS.gene28067:intron | 55.0% | |
| GAACACGTGGCAATAGGGGA+GGG | - | chr4.4:10795525-10795544 | None:intergenic | 55.0% | |
| GTGGCCGTTGTAAGATGGCT+TGG | + | chr4.4:10794511-10794530 | MS.gene28067:intron | 55.0% | |
| TAAATGGGGGTGGACCAGCT+TGG | - | chr4.4:10795875-10795894 | None:intergenic | 55.0% | |
| TCCCCACCCTAGTGAGTCTT+TGG | - | chr4.4:10794085-10794104 | None:intergenic | 55.0% | |
| TGGCAATAGGGGAGGGCAAT+GGG | - | chr4.4:10795518-10795537 | None:intergenic | 55.0% | |
| TTCGGGACTCTCCCCATTTC+AGG | - | chr4.4:10794460-10794479 | None:intergenic | 55.0% | |
| ! | GCCGTTGTAAGATGGCTTGG+AGG | + | chr4.4:10794514-10794533 | MS.gene28067:intron | 55.0% |
| !! | CACCCCACTCTCCACTTTTC+AGG | - | chr4.4:10794491-10794510 | None:intergenic | 55.0% |
| ATGCAACACACCCGCATGGG+AGG | + | chr4.4:10795660-10795679 | MS.gene28067:intron | 60.0% | |
| GAAGCGGTGTGTTTCGTCGC+TGG | - | chr4.4:10793515-10793534 | None:intergenic | 60.0% | |
| GCGGGAAAGAGAGATCGAGG+AGG | + | chr4.4:10796030-10796049 | MS.gene28067:CDS | 60.0% | |
| GTGGCAATAGGGGAGGGCAA+TGG | - | chr4.4:10795519-10795538 | None:intergenic | 60.0% | |
| ! | GGGTGGTGGCCGTTGTAAGA+TGG | + | chr4.4:10794506-10794525 | MS.gene28067:intron | 60.0% |
| CCCGCATGGGAGGCTCATGA+CGG | + | chr4.4:10795670-10795689 | MS.gene28067:intron | 65.0% | |
| CCCGTCATGAGCCTCCCATG+CGG | - | chr4.4:10795674-10795693 | None:intergenic | 65.0% | |
| CCGCATGGGAGGCTCATGAC+GGG | + | chr4.4:10795671-10795690 | MS.gene28067:intron | 65.0% | |
| CCGTCATGAGCCTCCCATGC+GGG | - | chr4.4:10795673-10795692 | None:intergenic | 65.0% | |
| GGGAGGGCAATGGGAGATGC+AGG | - | chr4.4:10795509-10795528 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 10793389 | 10796189 | 10793389 | ID=MS.gene28067 |
| chr4.4 | mRNA | 10793389 | 10796189 | 10793389 | ID=MS.gene28067.t1;Parent=MS.gene28067 |
| chr4.4 | exon | 10793389 | 10793712 | 10793389 | ID=MS.gene28067.t1.exon1;Parent=MS.gene28067.t1 |
| chr4.4 | CDS | 10793389 | 10793712 | 10793389 | ID=cds.MS.gene28067.t1;Parent=MS.gene28067.t1 |
| chr4.4 | exon | 10796007 | 10796189 | 10796007 | ID=MS.gene28067.t1.exon2;Parent=MS.gene28067.t1 |
| chr4.4 | CDS | 10796007 | 10796189 | 10796007 | ID=cds.MS.gene28067.t1;Parent=MS.gene28067.t1 |
| Gene Sequence |
| Protein sequence |
