AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065137


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065137.t1 MTR_1g110750 94.492 236 13 0 1 236 22 257 1.63e-161 447
MS.gene065137.t1 MTR_1g085490 32.639 144 88 5 57 197 74 211 1.24e-11 63.2
MS.gene065137.t1 MTR_1g031890 32.639 144 88 5 57 197 74 211 1.28e-11 63.2
MS.gene065137.t1 MTR_4g118060 32.639 144 88 5 57 197 74 211 1.35e-11 63.2
MS.gene065137.t1 MTR_1g031890 32.639 144 88 5 57 197 74 211 1.39e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065137.t1 AT3G25920 71.121 232 55 2 1 222 29 258 1.22e-109 317

Find 59 sgRNAs with CRISPR-Local

Find 393 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGGTTTCGGTTGGACAATT+TGG 0.209684 1.2:+82028052 MS.gene065137:CDS
CAAGGAGCGAGTTGTGGTTT+TGG 0.247810 1.2:+82028134 MS.gene065137:CDS
TCCTGCAATTCCTCTAAGTT+TGG 0.258498 1.2:-82028240 None:intergenic
CGGTTTCGGTTGGACAATTT+GGG 0.284648 1.2:+82028053 MS.gene065137:CDS
AGCAGCTGCTTCTCGCTTCT+TGG 0.291577 1.2:-82032867 None:intergenic
TTGCATATTTAAACAGAATC+TGG 0.313222 1.2:-82032896 None:intergenic
CGACGATTGCCCAAACTTAG+AGG 0.316218 1.2:+82028230 MS.gene065137:CDS
AGATTGATGTGGACATATTT+CGG 0.336463 1.2:-82029268 None:intergenic
CTCTTTCTTGAACCTGGTTG+TGG 0.358662 1.2:-82028077 None:intergenic
TTAAGACATGGACATAGATA+TGG 0.367880 1.2:-82027951 None:intergenic
TGTTCCATCACTGTGATTCC+TGG 0.369456 1.2:+82032782 MS.gene065137:CDS
CCCAAACTTAGAGGAATTGC+AGG 0.376415 1.2:+82028239 MS.gene065137:CDS
TGATTCCTGGCCGTAAGAAA+TGG 0.380224 1.2:+82032795 MS.gene065137:CDS
CCTGCAATTCCTCTAAGTTT+GGG 0.397805 1.2:-82028239 None:intergenic
CTCCTTCGCTGATGTGGAAA+AGG 0.406202 1.2:-82032741 None:intergenic
TTTGCTCTCTTTCTTGAACC+TGG 0.419614 1.2:-82028083 None:intergenic
TAATAAGGCTGCTTCTGCTT+CGG 0.436199 1.2:+82028007 MS.gene065137:CDS
AAGAAAGAGAGCAAAGAGAA+AGG 0.443452 1.2:+82028091 MS.gene065137:CDS
ATGGCTTAACCCATTTCTTA+CGG 0.452810 1.2:-82032805 None:intergenic
AACCAGCAGGTGAAAATGTT+CGG 0.456863 1.2:+82028033 MS.gene065137:CDS
AGAAGGGGAAGAGGTGTCTC+TGG 0.461261 1.2:+82029318 MS.gene065137:CDS
CAGGTGAAAATGTTCGGTTT+CGG 0.473561 1.2:+82028039 MS.gene065137:CDS
GACAATTTGGGTCCACAACC+AGG 0.479320 1.2:+82028065 MS.gene065137:CDS
AGAAAGAGAGCAAAGAGAAA+GGG 0.484644 1.2:+82028092 MS.gene065137:CDS
TGAAAATGTTCGGTTTCGGT+TGG 0.487169 1.2:+82028043 MS.gene065137:CDS
AAGTTTCTCCTTCGCTGATG+TGG 0.489671 1.2:-82032747 None:intergenic
TTAACCCATTTCTTACGGCC+AGG 0.492636 1.2:-82032800 None:intergenic
GAAATATGTCCACATCAATC+TGG 0.495258 1.2:+82029270 MS.gene065137:CDS
GGAACGGAAACTTCTATTGA+AGG 0.496485 1.2:+82029381 MS.gene065137:CDS
AGTTTCCGTTCCCTTCCTGA+TGG 0.497026 1.2:-82029370 None:intergenic
ACATAATAAGGTATGCATGC+TGG 0.501018 1.2:+82029241 MS.gene065137:intron
TCTGCTTCGGTGAAACCAGC+AGG 0.507750 1.2:+82028020 MS.gene065137:CDS
AGAGCAAAGAGAAAGGGAAG+AGG 0.509714 1.2:+82028098 MS.gene065137:CDS
GATTCCTGGCCGTAAGAAAT+GGG 0.511756 1.2:+82032796 MS.gene065137:CDS
GAAGATGCTGGATTTCAAGA+AGG 0.525528 1.2:+82029301 MS.gene065137:CDS
AAGGAGAAACTTGAGTCTGC+TGG 0.526406 1.2:+82032758 MS.gene065137:CDS
CTGGTAGACATAGAAGATGC+TGG 0.527862 1.2:+82029289 MS.gene065137:CDS
AAACGTGTGATTAACCCATC+AGG 0.531753 1.2:+82029355 MS.gene065137:CDS
AAGATGCTGGATTTCAAGAA+GGG 0.537870 1.2:+82029302 MS.gene065137:CDS
GTTTCCGTTCCCTTCCTGAT+GGG 0.539207 1.2:-82029369 None:intergenic
AGAGGTATTGCCGCAGGACA+AGG 0.557884 1.2:+82028116 MS.gene065137:CDS
TTGGGCAATCGTCGATAAAG+TGG 0.564517 1.2:-82028221 None:intergenic
AAGAAGTTGACAATAAAAGC+TGG 0.573815 1.2:+82032716 MS.gene065137:CDS
GCAGGACAAGGAGCGAGTTG+TGG 0.577933 1.2:+82028128 MS.gene065137:CDS
TGGATTTCAAGAAGGGGAAG+AGG 0.578835 1.2:+82029309 MS.gene065137:CDS
GTAGGGAAATGTGAAAACCT+TGG 0.584114 1.2:+82027920 None:intergenic
AAGGGAAGAGGTATTGCCGC+AGG 0.588347 1.2:+82028110 MS.gene065137:CDS
GGTGTCTCTGGAGACACTGA+CGG 0.598433 1.2:+82029330 MS.gene065137:CDS
GTGTGATTAACCCATCAGGA+AGG 0.611754 1.2:+82029359 MS.gene065137:CDS
CTTCTTGGCGAAGTATTCGT+CGG 0.627986 1.2:-82032852 None:intergenic
ACGGCCAGGAATCACAGTGA+TGG 0.630385 1.2:-82032786 None:intergenic
TGTGATTAACCCATCAGGAA+GGG 0.634878 1.2:+82029360 MS.gene065137:CDS
TCTGGACCTGGTATCATGAG+AGG 0.634957 1.2:+82028179 MS.gene065137:CDS
TCAAAACCTCTCATGATACC+AGG 0.646172 1.2:-82028185 None:intergenic
CTATGTCTACCAGATTGATG+TGG 0.650882 1.2:-82029279 None:intergenic
TTAACCCATCAGGAAGGGAA+CGG 0.658603 1.2:+82029365 MS.gene065137:CDS
AGATGCTGGATTTCAAGAAG+GGG 0.662527 1.2:+82029303 MS.gene065137:CDS
ACAACTCGCTCCTTGTCCTG+CGG 0.686055 1.2:-82028126 None:intergenic
AAACTTAGAGGAATTGCAGG+AGG 0.696930 1.2:+82028242 MS.gene065137:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATTAAATGTACATTTA+GGG - chr1.2:82030133-82030152 None:intergenic 10.0%
!!! TACACAATATATTTTTAAAA+AGG + chr1.2:82032631-82032650 MS.gene065137:intron 10.0%
!!! TTTTAATTAAATGTACATTT+AGG - chr1.2:82030134-82030153 None:intergenic 10.0%
!! AATTTCAACAATAAAACAAT+AGG - chr1.2:82028299-82028318 None:intergenic 15.0%
!! GAATTATATTAGGATAATTT+AGG + chr1.2:82028684-82028703 MS.gene065137:intron 15.0%
!!! AAAAGCAATTATTTTATGAA+AGG + chr1.2:82029109-82029128 MS.gene065137:intron 15.0%
!!! GATTATTTTAGATTAACTAT+AGG - chr1.2:82029926-82029945 None:intergenic 15.0%
!!! TATTAATCTTTTTCACTTTA+AGG + chr1.2:82031535-82031554 MS.gene065137:intron 15.0%
!!! TCTAATATCATTTAGAATTT+TGG + chr1.2:82032000-82032019 MS.gene065137:intron 15.0%
!! AAAGAGTTAAAGTTAGTTAA+TGG + chr1.2:82029783-82029802 MS.gene065137:intron 20.0%
!! AAATATCAATTTCTGTCTAT+TGG + chr1.2:82030151-82030170 MS.gene065137:intron 20.0%
!! AACAAAACATCGTAAAAAAA+GGG - chr1.2:82028612-82028631 None:intergenic 20.0%
!! ACCAGATAGAATATTTAAAA+GGG + chr1.2:82030572-82030591 MS.gene065137:intron 20.0%
!! GAGAATTCAAGAATATAAAA+TGG + chr1.2:82030719-82030738 MS.gene065137:intron 20.0%
!! TAACAAAACATCGTAAAAAA+AGG - chr1.2:82028613-82028632 None:intergenic 20.0%
!! TACCAGATAGAATATTTAAA+AGG + chr1.2:82030571-82030590 MS.gene065137:intron 20.0%
!! TTTCATATTATGCCTTTAAT+CGG + chr1.2:82029625-82029644 MS.gene065137:intron 20.0%
!!! ATTTCTAAAGTGATATTTAG+CGG + chr1.2:82032272-82032291 MS.gene065137:intron 20.0%
!!! CTTTGAAAATCTACATATTA+GGG - chr1.2:82028898-82028917 None:intergenic 20.0%
!!! GAAAATAATGTTTTCAACTA+TGG + chr1.2:82028336-82028355 MS.gene065137:intron 20.0%
!!! GGATTTTGTTGAATTATATT+AGG + chr1.2:82028674-82028693 MS.gene065137:intron 20.0%
!!! TATTTTCAACAAGAGAAATA+AGG + chr1.2:82029962-82029981 MS.gene065137:intron 20.0%
!!! TCTTTGAAAATCTACATATT+AGG - chr1.2:82028899-82028918 None:intergenic 20.0%
!!! TTCACTTTTAAAAACAAATG+AGG + chr1.2:82029511-82029530 MS.gene065137:intron 20.0%
! AAAAGGAAAAGATGTCTTTA+TGG + chr1.2:82030899-82030918 MS.gene065137:intron 25.0%
! AAAGGAAAAGATGTCTTTAT+GGG + chr1.2:82030900-82030919 MS.gene065137:intron 25.0%
! AATAAAAAAGATTACCGAAC+AGG + chr1.2:82030824-82030843 MS.gene065137:intron 25.0%
! AGAAGTCTTTCTTGATATAT+GGG - chr1.2:82029557-82029576 None:intergenic 25.0%
! ATAAAAAAGATTACCGAACA+GGG + chr1.2:82030825-82030844 MS.gene065137:intron 25.0%
! CAATTTCAAACAACTTATAC+AGG + chr1.2:82032514-82032533 MS.gene065137:intron 25.0%
! CATTTCAAGATGTCAATAAA+GGG - chr1.2:82028936-82028955 None:intergenic 25.0%
! CTCTTGTTGAAAATATGTTT+AGG - chr1.2:82029957-82029976 None:intergenic 25.0%
! GTATATCATTGAAGATTATG+TGG + chr1.2:82030201-82030220 MS.gene065137:intron 25.0%
! GTTGTCTATAAATAAGAAGA+GGG + chr1.2:82029988-82030007 MS.gene065137:intron 25.0%
! TAGTCTATATACTACCAAAT+GGG + chr1.2:82028475-82028494 MS.gene065137:intron 25.0%
! TCATTAGTAGGAAAAAACAA+TGG + chr1.2:82028751-82028770 MS.gene065137:intron 25.0%
! TGATGTGTCATAATGTTATT+AGG + chr1.2:82030431-82030450 MS.gene065137:intron 25.0%
! TGTAAAAGTTGGAATATAAG+AGG + chr1.2:82029749-82029768 MS.gene065137:intron 25.0%
! TGTCAGATTCTAAACATATT+TGG - chr1.2:82031131-82031150 None:intergenic 25.0%
! TGTTGTCTATAAATAAGAAG+AGG + chr1.2:82029987-82030006 MS.gene065137:intron 25.0%
! TTAGTCTATATACTACCAAA+TGG + chr1.2:82028474-82028493 MS.gene065137:intron 25.0%
! TTATTAACAACAAAAACACG+AGG - chr1.2:82027993-82028012 None:intergenic 25.0%
! TTGACATTGTAATTCAATGA+TGG + chr1.2:82028372-82028391 MS.gene065137:intron 25.0%
! TTTCATATGAAATAGGTGTT+GGG + chr1.2:82030326-82030345 MS.gene065137:intron 25.0%
!! AAAGTTAGTTAATGGATGTT+GGG + chr1.2:82029791-82029810 MS.gene065137:intron 25.0%
!! AATAATGTTTTCAACTATGG+TGG + chr1.2:82028339-82028358 MS.gene065137:intron 25.0%
!! AATATTTTCCTGAGTTTATG+AGG - chr1.2:82032477-82032496 None:intergenic 25.0%
!! ACCCTTTTAAATATTCTATC+TGG - chr1.2:82030576-82030595 None:intergenic 25.0%
!! GAATTTGAAACTGTAAAAGT+TGG + chr1.2:82029738-82029757 MS.gene065137:intron 25.0%
!! TAAAGTTAGTTAATGGATGT+TGG + chr1.2:82029790-82029809 MS.gene065137:intron 25.0%
!! TAAGTTCAAACGCAATATTT+TGG + chr1.2:82029697-82029716 MS.gene065137:intron 25.0%
!! TTAAAAGGGTTTTTCTTGAA+AGG + chr1.2:82030586-82030605 MS.gene065137:intron 25.0%
!! TTCGTAGATATGAAAAGTAT+TGG - chr1.2:82032240-82032259 None:intergenic 25.0%
!! TTTTCATATGAAATAGGTGT+TGG + chr1.2:82030325-82030344 MS.gene065137:intron 25.0%
!!! AATTCTATTTCTAAGTTGGT+TGG - chr1.2:82031754-82031773 None:intergenic 25.0%
!!! CTTGTATTTTTAATAGAGCT+GGG + chr1.2:82031700-82031719 MS.gene065137:intron 25.0%
!!! CTTTTAAAAACAAATGAGGA+TGG + chr1.2:82029515-82029534 MS.gene065137:intron 25.0%
!!! GAGGTATTTTCATATGAAAT+AGG + chr1.2:82030319-82030338 MS.gene065137:intron 25.0%
!!! TCGTGTTTTTGTTGTTAATA+AGG + chr1.2:82027992-82028011 MS.gene065137:CDS 25.0%
!!! TCTTGTATTTTTAATAGAGC+TGG + chr1.2:82031699-82031718 MS.gene065137:intron 25.0%
!!! TCTTGTCATTTTAGTATAGT+CGG + chr1.2:82030034-82030053 MS.gene065137:intron 25.0%
!!! TCTTTTTCACTTTAAGGATA+AGG + chr1.2:82031541-82031560 MS.gene065137:intron 25.0%
!!! TTGCTTTTGAAATGAAATCA+TGG - chr1.2:82029097-82029116 None:intergenic 25.0%
!!! TTTTGAAATGAAATCATGGA+AGG - chr1.2:82029093-82029112 None:intergenic 25.0%
AAATGAGTGAAGAAAAGAGT+CGG + chr1.2:82030674-82030693 MS.gene065137:intron 30.0%
AAATGGAGAAGTAAGAAGAA+AGG + chr1.2:82030736-82030755 MS.gene065137:intron 30.0%
AACATGTAAGACAACAACTA+AGG - chr1.2:82029447-82029466 None:intergenic 30.0%
AACCAAAATTCTCCGATTAA+AGG - chr1.2:82029640-82029659 None:intergenic 30.0%
AACTACTACATCAAGCTAAA+AGG + chr1.2:82031454-82031473 MS.gene065137:intron 30.0%
AACTTTATTCACGATAGACA+AGG - chr1.2:82029591-82029610 None:intergenic 30.0%
AAGAAGAAAGGTGAAAGAAA+TGG + chr1.2:82030748-82030767 MS.gene065137:intron 30.0%
AAGAAGTTGACAATAAAAGC+TGG + chr1.2:82032716-82032735 MS.gene065137:CDS 30.0%
AAGACTTCCTTTATAAGAAG+AGG + chr1.2:82031315-82031334 MS.gene065137:intron 30.0%
AATGAAATCATGGAAGGATA+TGG - chr1.2:82029087-82029106 None:intergenic 30.0%
ACATGTAAGACAACAACTAA+GGG - chr1.2:82029446-82029465 None:intergenic 30.0%
ACTACTACATCAAGCTAAAA+GGG + chr1.2:82031455-82031474 MS.gene065137:intron 30.0%
ACTTCTAATTAGTCATGCAT+TGG + chr1.2:82032558-82032577 MS.gene065137:intron 30.0%
ACTTTAACTCTTTCAACCAA+CGG - chr1.2:82029776-82029795 None:intergenic 30.0%
ACTTTATTCACGATAGACAA+GGG - chr1.2:82029590-82029609 None:intergenic 30.0%
AGAAGAGCTCTTTCAAATAA+TGG - chr1.2:82032449-82032468 None:intergenic 30.0%
AGATTGATGTGGACATATTT+CGG - chr1.2:82029271-82029290 None:intergenic 30.0%
AGGAAGAGAAATTTAGGTAT+TGG - chr1.2:82029008-82029027 None:intergenic 30.0%
ATACCCAACAAAATACCAAA+TGG - chr1.2:82030484-82030503 None:intergenic 30.0%
ATGACTTTCAAATGTGATGT+AGG - chr1.2:82028832-82028851 None:intergenic 30.0%
ATTATTTGAAAGAGCTCTTC+TGG + chr1.2:82032448-82032467 MS.gene065137:intron 30.0%
ATTTCTGTCTATTGGTATCA+AGG + chr1.2:82030159-82030178 MS.gene065137:intron 30.0%
CAGAAGTCTTTCTTGATATA+TGG - chr1.2:82029558-82029577 None:intergenic 30.0%
CAGAGTTTCACAATTTGTAA+TGG - chr1.2:82031023-82031042 None:intergenic 30.0%
CCATTTCAAGATGTCAATAA+AGG - chr1.2:82028937-82028956 None:intergenic 30.0%
CCTTTATTGACATCTTGAAA+TGG + chr1.2:82028934-82028953 MS.gene065137:intron 30.0%
CTTCTAATTAGTCATGCATT+GGG + chr1.2:82032559-82032578 MS.gene065137:intron 30.0%
GAAGTCTTTCTTGATATATG+GGG - chr1.2:82029556-82029575 None:intergenic 30.0%
GATATATACAACAGCATATC+CGG - chr1.2:82028876-82028895 None:intergenic 30.0%
GTATCTACCTCTTCTTATAA+AGG - chr1.2:82031325-82031344 None:intergenic 30.0%
TAAAAAAGATTACCGAACAG+GGG + chr1.2:82030826-82030845 MS.gene065137:intron 30.0%
TACCCAACAAAATACCAAAT+GGG - chr1.2:82030483-82030502 None:intergenic 30.0%
TATAAATAAGAAGAGGGCTT+AGG + chr1.2:82029994-82030013 MS.gene065137:intron 30.0%
TATATATAAGAAGAGGCTGA+AGG + chr1.2:82031669-82031688 MS.gene065137:intron 30.0%
TGCTCTACATGAATAATACT+TGG - chr1.2:82031357-82031376 None:intergenic 30.0%
TGCTGTCTATATATAAGAAG+AGG + chr1.2:82031662-82031681 MS.gene065137:intron 30.0%
TGTTGGATTGTATTTCAAAG+AGG + chr1.2:82031247-82031266 MS.gene065137:intron 30.0%
TTAAGACATGGACATAGATA+TGG - chr1.2:82027954-82027973 None:intergenic 30.0%
TTAGGGAAAATTTCCTTGTA+TGG - chr1.2:82030116-82030135 None:intergenic 30.0%
TTATTGTCTGAAGAGAATCA+TGG + chr1.2:82028960-82028979 MS.gene065137:intron 30.0%
TTTCTTTCATTCTTTGTCGT+AGG + chr1.2:82029134-82029153 MS.gene065137:intron 30.0%
TTTCTTTGAGCCTTACAAAA+CGG - chr1.2:82029862-82029881 None:intergenic 30.0%
! AACCCATTTGGTATTTTGTT+GGG + chr1.2:82030478-82030497 MS.gene065137:intron 30.0%
! AATAAGAATAAAGGCACACA+TGG + chr1.2:82030228-82030247 MS.gene065137:intron 30.0%
! AATATAATTTGCCCGCTAAT+AGG + chr1.2:82028583-82028602 MS.gene065137:intron 30.0%
! AATTTAGGATCCTACTGTTA+GGG + chr1.2:82028699-82028718 MS.gene065137:intron 30.0%
! ATTGTTTTCATGATGTCTAG+AGG + chr1.2:82029477-82029496 MS.gene065137:intron 30.0%
! TAACCCATTTGGTATTTTGT+TGG + chr1.2:82030477-82030496 MS.gene065137:intron 30.0%
! TAATTTAGGATCCTACTGTT+AGG + chr1.2:82028698-82028717 MS.gene065137:intron 30.0%
! TCTAGCATCATGAATTTTGT+TGG + chr1.2:82032338-82032357 MS.gene065137:intron 30.0%
!! AAATTTAGGTATTGGAAGCT+TGG - chr1.2:82029000-82029019 None:intergenic 30.0%
!! AATAATAGTTTGTTGTGCTC+TGG + chr1.2:82032663-82032682 MS.gene065137:intron 30.0%
!! ACACATTACTTGTTGGTTTA+TGG + chr1.2:82029405-82029424 MS.gene065137:intron 30.0%
!! GAGCAATTCTATTTCTAAGT+TGG - chr1.2:82031758-82031777 None:intergenic 30.0%
!! TAAACATGAAGATGGATTGT+TGG + chr1.2:82031230-82031249 MS.gene065137:intron 30.0%
!!! ATTCGCTGAATTTTAAGACA+TGG - chr1.2:82027966-82027985 None:intergenic 30.0%
!!! CTTGTCATTTTAGTATAGTC+GGG + chr1.2:82030035-82030054 MS.gene065137:intron 30.0%
!!! TTGTCATTTTAGTATAGTCG+GGG + chr1.2:82030036-82030055 MS.gene065137:intron 30.0%
AAAAAAGGGCAACCTATTAG+CGG - chr1.2:82028598-82028617 None:intergenic 35.0%
AAAGAAACTGTAGCATGTTC+TGG + chr1.2:82032298-82032317 MS.gene065137:intron 35.0%
AAGAAAGAGAGCAAAGAGAA+AGG + chr1.2:82028091-82028110 MS.gene065137:CDS 35.0%
AAGATGCTGGATTTCAAGAA+GGG + chr1.2:82029302-82029321 MS.gene065137:CDS 35.0%
AATCTGACAACTTCAACCTT+TGG + chr1.2:82031142-82031161 MS.gene065137:intron 35.0%
ACATAATAAGGTATGCATGC+TGG + chr1.2:82029241-82029260 MS.gene065137:intron 35.0%
ACATATAATACGCTACCAAG+TGG + chr1.2:82032390-82032409 MS.gene065137:intron 35.0%
ACTATTGGAGGAGATGAATT+TGG + chr1.2:82030641-82030660 MS.gene065137:intron 35.0%
AGAAAGAGAGCAAAGAGAAA+GGG + chr1.2:82028092-82028111 MS.gene065137:CDS 35.0%
ATCAATTTGACATACAGGTC+AGG + chr1.2:82030535-82030554 MS.gene065137:intron 35.0%
ATCTCTTCTTACACAACACT+TGG + chr1.2:82028266-82028285 MS.gene065137:intron 35.0%
ATCTGACAACTTCAACCTTT+GGG + chr1.2:82031143-82031162 MS.gene065137:intron 35.0%
ATGGCTTAACCCATTTCTTA+CGG - chr1.2:82032808-82032827 None:intergenic 35.0%
ATTGATGAGAGGCAGATTAA+TGG + chr1.2:82031290-82031309 MS.gene065137:intron 35.0%
CAAGAAAGACTTCTGATATG+AGG + chr1.2:82029563-82029582 MS.gene065137:intron 35.0%
CAAGGATCAATTTGACATAC+AGG + chr1.2:82030530-82030549 MS.gene065137:intron 35.0%
CATATAATACGCTACCAAGT+GGG + chr1.2:82032391-82032410 MS.gene065137:intron 35.0%
CTAACAGAAGTGGAATGAAA+AGG + chr1.2:82030882-82030901 MS.gene065137:intron 35.0%
CTACATGTAGCATCATTAGT+AGG + chr1.2:82028739-82028758 MS.gene065137:intron 35.0%
GAAATATGTCCACATCAATC+TGG + chr1.2:82029270-82029289 MS.gene065137:CDS 35.0%
GAAATGGAGTGAAATGACTA+TGG + chr1.2:82030764-82030783 MS.gene065137:intron 35.0%
GAACTGAGGAAGAGAAATTT+AGG - chr1.2:82029014-82029033 None:intergenic 35.0%
GAAGGATATGGAAGAATAAG+GGG - chr1.2:82029075-82029094 None:intergenic 35.0%
GCATTCTTTACCTTACAAAC+TGG - chr1.2:82032045-82032064 None:intergenic 35.0%
GGAAAACTACAGAACTTCAA+AGG - chr1.2:82030095-82030114 None:intergenic 35.0%
GGAAGGATATGGAAGAATAA+GGG - chr1.2:82029076-82029095 None:intergenic 35.0%
GTATATGCATAAATCTCGCT+TGG + chr1.2:82029176-82029195 MS.gene065137:intron 35.0%
GTCAAGCATAATAAGAACTG+AGG - chr1.2:82029028-82029047 None:intergenic 35.0%
GTGAAGGAAAATAACATGCT+CGG + chr1.2:82031845-82031864 MS.gene065137:intron 35.0%
GTGAGGAAGTAATTTCAGTT+GGG + chr1.2:82030263-82030282 MS.gene065137:intron 35.0%
TACATAATCAATCTGCAACC+AGG - chr1.2:82028796-82028815 None:intergenic 35.0%
TAGATGAGAATTGTGATTCC+TGG + chr1.2:82028775-82028794 MS.gene065137:intron 35.0%
TAGCATCATAATGCTTCACA+TGG + chr1.2:82028642-82028661 MS.gene065137:intron 35.0%
TCATGAAGTATGCCTATTAC+AGG + chr1.2:82028848-82028867 MS.gene065137:intron 35.0%
TCTCTTCTTACACAACACTT+GGG + chr1.2:82028267-82028286 MS.gene065137:intron 35.0%
TCTGAACCAGATTCTGTTTA+AGG + chr1.2:82032890-82032909 MS.gene065137:CDS 35.0%
TGAAGAGAATCATGGCATTA+TGG + chr1.2:82028968-82028987 MS.gene065137:intron 35.0%
TGAGGAAGTAATTTCAGTTG+GGG + chr1.2:82030264-82030283 MS.gene065137:intron 35.0%
TGAGTTAAGCTTGTAGTTTG+TGG + chr1.2:82031611-82031630 MS.gene065137:intron 35.0%
TGCTTCACATGGAGTTTAAA+TGG + chr1.2:82028653-82028672 MS.gene065137:intron 35.0%
TGGAAGGATATGGAAGAATA+AGG - chr1.2:82029077-82029096 None:intergenic 35.0%
TGTCACATCATTGTTGAATG+CGG + chr1.2:82030958-82030977 MS.gene065137:intron 35.0%
TGTGGCGTGAATAAGAATAA+AGG + chr1.2:82030219-82030238 MS.gene065137:intron 35.0%
TTCATGTTTAGCAACAGCAT+AGG - chr1.2:82031220-82031239 None:intergenic 35.0%
TTGATACACCTGTTAGTTGA+AGG + chr1.2:82031584-82031603 MS.gene065137:intron 35.0%
! AAAAGTGTGCTCTTGTACAA+AGG + chr1.2:82030989-82031008 MS.gene065137:intron 35.0%
! AAGGGTTTTTCTTGAAAGGA+CGG + chr1.2:82030590-82030609 MS.gene065137:intron 35.0%
! ATAATCGAGTCCGTTTTGTA+AGG + chr1.2:82029849-82029868 MS.gene065137:intron 35.0%
! CTTTTCATTCCACTTCTGTT+AGG - chr1.2:82030884-82030903 None:intergenic 35.0%
! GAGTTAAGCTTGTAGTTTGT+GGG + chr1.2:82031612-82031631 MS.gene065137:intron 35.0%
! GTTCTGTAGTTTTCCATACA+AGG + chr1.2:82030100-82030119 MS.gene065137:intron 35.0%
! TGAAGGTACACATTACTTGT+TGG + chr1.2:82029398-82029417 MS.gene065137:intron 35.0%
! TGCCTTTAATCGGAGAATTT+TGG + chr1.2:82029635-82029654 MS.gene065137:intron 35.0%
! TGTGAAGCATTATGATGCTA+CGG - chr1.2:82028642-82028661 None:intergenic 35.0%
! TTCTTGATATATGGGGTACT+AGG - chr1.2:82029549-82029568 None:intergenic 35.0%
! TTTTCCTTCACAAGGCTTAT+AGG - chr1.2:82031836-82031855 None:intergenic 35.0%
!! ATTTCTAAGTTGGTTGGAAG+AGG - chr1.2:82031748-82031767 None:intergenic 35.0%
!! GTTCAAACGCAATATTTTGG+TGG + chr1.2:82029700-82029719 MS.gene065137:intron 35.0%
!! TAGATATGGTTTTGCTACCA+AGG - chr1.2:82027940-82027959 None:intergenic 35.0%
!! TTTCTAAGTTGGTTGGAAGA+GGG - chr1.2:82031747-82031766 None:intergenic 35.0%
!! TTTGTACAAGAGCACACTTT+TGG - chr1.2:82030990-82031009 None:intergenic 35.0%
!!! GCATGTTATTTTCCTTCACA+AGG - chr1.2:82031844-82031863 None:intergenic 35.0%
!!! TGTCATTTTAGTATAGTCGG+GGG + chr1.2:82030037-82030056 MS.gene065137:intron 35.0%
AAAAAGGGCAACCTATTAGC+GGG - chr1.2:82028597-82028616 None:intergenic 40.0%
AAACAAAGCTTGTCCTTCCA+TGG - chr1.2:82030381-82030400 None:intergenic 40.0%
AAACGTGTGATTAACCCATC+AGG + chr1.2:82029355-82029374 MS.gene065137:CDS 40.0%
AAACTTAGAGGAATTGCAGG+AGG + chr1.2:82028242-82028261 MS.gene065137:CDS 40.0%
AAAGAGTTCTTTGGCATGAC+TGG + chr1.2:82031409-82031428 MS.gene065137:intron 40.0%
AAATGACTATGGCATGGAAG+TGG + chr1.2:82030775-82030794 MS.gene065137:intron 40.0%
AACCAGCAGGTGAAAATGTT+CGG + chr1.2:82028033-82028052 MS.gene065137:CDS 40.0%
AAGAATGCCCAAGCTCTATT+TGG + chr1.2:82032057-82032076 MS.gene065137:intron 40.0%
AAGAGTTCTTTGGCATGACT+GGG + chr1.2:82031410-82031429 MS.gene065137:intron 40.0%
AGAATGCCCAAGCTCTATTT+GGG + chr1.2:82032058-82032077 MS.gene065137:intron 40.0%
AGAGCAACACAAAGTTTGAG+AGG + chr1.2:82031371-82031390 MS.gene065137:intron 40.0%
AGAGGTCAAAAATCTCGATC+TGG + chr1.2:82028161-82028180 MS.gene065137:CDS 40.0%
AGATGCTGGATTTCAAGAAG+GGG + chr1.2:82029303-82029322 MS.gene065137:CDS 40.0%
AGCTTGAAGATGAAGTTGTG+GGG + chr1.2:82031174-82031193 MS.gene065137:intron 40.0%
AGGATAAGGTGAAACTTGAG+AGG + chr1.2:82031555-82031574 MS.gene065137:intron 40.0%
AGTAGCCAAGGTGATATCAA+AGG + chr1.2:82031094-82031113 MS.gene065137:intron 40.0%
ATAAGTCATCTGTGTAGCCA+TGG + chr1.2:82030361-82030380 MS.gene065137:intron 40.0%
ATACGAGATTCGTTGTTCGA+TGG - chr1.2:82031074-82031093 None:intergenic 40.0%
ATATACTCCCAACTCCTTGA+TGG - chr1.2:82030187-82030206 None:intergenic 40.0%
CAAAAAACCTTACCGGAAGA+TGG + chr1.2:82031807-82031826 MS.gene065137:intron 40.0%
CACACTCAGGACTGAATATT+TGG - chr1.2:82032105-82032124 None:intergenic 40.0%
CAGGTGAAAATGTTCGGTTT+CGG + chr1.2:82028039-82028058 MS.gene065137:CDS 40.0%
CATTAGGTCTTCATGCATGT+AGG - chr1.2:82031047-82031066 None:intergenic 40.0%
CCTGCAATTCCTCTAAGTTT+GGG - chr1.2:82028242-82028261 None:intergenic 40.0%
CTATGTCTACCAGATTGATG+TGG - chr1.2:82029282-82029301 None:intergenic 40.0%
CTCAAACTCCTTCAACTAAC+AGG - chr1.2:82031595-82031614 None:intergenic 40.0%
CTTTGCCTTTGATATCACCT+TGG - chr1.2:82031102-82031121 None:intergenic 40.0%
GAAAATAACATGCTCGGCAA+CGG + chr1.2:82031851-82031870 MS.gene065137:intron 40.0%
GAACCAATGAAGAACAAAGC+TGG + chr1.2:82030925-82030944 MS.gene065137:intron 40.0%
GAAGATGCTGGATTTCAAGA+AGG + chr1.2:82029301-82029320 MS.gene065137:CDS 40.0%
GAGCTTGAAGATGAAGTTGT+GGG + chr1.2:82031173-82031192 MS.gene065137:intron 40.0%
GATTATGCGGTTGAGAAACA+CGG - chr1.2:82029835-82029854 None:intergenic 40.0%
GCTGTTGCTAAACATGAAGA+TGG + chr1.2:82031222-82031241 MS.gene065137:intron 40.0%
GGAAAAGATGTCTTTATGGG+TGG + chr1.2:82030903-82030922 MS.gene065137:intron 40.0%
GGAACGGAAACTTCTATTGA+AGG + chr1.2:82029381-82029400 MS.gene065137:CDS 40.0%
GGTGAGGAAGTAATTTCAGT+TGG + chr1.2:82030262-82030281 MS.gene065137:intron 40.0%
GTTGGATCAACAAGTTTGAG+AGG + chr1.2:82030300-82030319 MS.gene065137:intron 40.0%
GTTTCGGCAAAAAACCTTAC+CGG + chr1.2:82031800-82031819 MS.gene065137:intron 40.0%
TAATAAGGCTGCTTCTGCTT+CGG + chr1.2:82028007-82028026 MS.gene065137:CDS 40.0%
TCAAAACCTCTCATGATACC+AGG - chr1.2:82028188-82028207 None:intergenic 40.0%
TCCATGATTCGTAACCCATT+TGG + chr1.2:82030466-82030485 MS.gene065137:intron 40.0%
TCCTGCAATTCCTCTAAGTT+TGG - chr1.2:82028243-82028262 None:intergenic 40.0%
TGAAAATGTTCGGTTTCGGT+TGG + chr1.2:82028043-82028062 MS.gene065137:CDS 40.0%
TGAGCTTGAAGATGAAGTTG+TGG + chr1.2:82031172-82031191 MS.gene065137:intron 40.0%
TGTGATTAACCCATCAGGAA+GGG + chr1.2:82029360-82029379 MS.gene065137:CDS 40.0%
TTATGACACATCACCCAAGT+CGG - chr1.2:82030424-82030443 None:intergenic 40.0%
TTGGAATATAAGAGGTCCGT+TGG + chr1.2:82029757-82029776 MS.gene065137:intron 40.0%
TTGTTGGGTATGAAGCAAGA+GGG + chr1.2:82030493-82030512 MS.gene065137:intron 40.0%
TTTGCTCTCTTTCTTGAACC+TGG - chr1.2:82028086-82028105 None:intergenic 40.0%
TTTGTTGGGTATGAAGCAAG+AGG + chr1.2:82030492-82030511 MS.gene065137:intron 40.0%
! ACAAAACGGACTCGATTATG+CGG - chr1.2:82029848-82029867 None:intergenic 40.0%
! AGGACTGAATATTTGGAGTG+AGG - chr1.2:82032098-82032117 None:intergenic 40.0%
! TCTGGTTTCCTCATAAACTC+AGG + chr1.2:82032466-82032485 MS.gene065137:intron 40.0%
! TTTTTATTCTCCTCTGCCCT+AGG - chr1.2:82030812-82030831 None:intergenic 40.0%
!! AATGGGTTACGAATCATGGA+TGG - chr1.2:82030466-82030485 None:intergenic 40.0%
!! ACCAAATGGGTTACGAATCA+TGG - chr1.2:82030470-82030489 None:intergenic 40.0%
!! ACCTTACAAACTGGTCTTGT+CGG - chr1.2:82032036-82032055 None:intergenic 40.0%
!! CATATGAAATAGGTGTTGGG+AGG + chr1.2:82030329-82030348 MS.gene065137:intron 40.0%
!! CTTCCAGCTTTGTTCTTCAT+TGG - chr1.2:82030931-82030950 None:intergenic 40.0%
!! GGTATCATGAGAGGTTTTGA+AGG + chr1.2:82028188-82028207 MS.gene065137:CDS 40.0%
!! GTTCTGGATCCAGGTTTTTA+GGG - chr1.2:82031949-82031968 None:intergenic 40.0%
!!! AGTTGTGGTTTTGGAATGAG+AGG + chr1.2:82028143-82028162 MS.gene065137:CDS 40.0%
!!! ATCATGAGAGGTTTTGAAGG+TGG + chr1.2:82028191-82028210 MS.gene065137:CDS 40.0%
!!! GCAAGATTTTTGGCAACTGA+TGG - chr1.2:82032827-82032846 None:intergenic 40.0%
AAATACGCTGTTACCAGAGC+AGG - chr1.2:82031971-82031990 None:intergenic 45.0%
AAGAAAAGAGTCGGTCGGTT+TGG + chr1.2:82030683-82030702 MS.gene065137:intron 45.0%
AAGAGGGCTTAGGTTTGAGA+GGG + chr1.2:82030004-82030023 MS.gene065137:intron 45.0%
AAGGAGAAACTTGAGTCTGC+TGG + chr1.2:82032758-82032777 MS.gene065137:CDS 45.0%
AAGGCTTCCCAAATAGAGCT+TGG - chr1.2:82032068-82032087 None:intergenic 45.0%
AAGTTTCTCCTTCGCTGATG+TGG - chr1.2:82032750-82032769 None:intergenic 45.0%
AATGCTCCAAAACCCGACTT+GGG + chr1.2:82030408-82030427 MS.gene065137:intron 45.0%
ACCGACAAGACCAGTTTGTA+AGG + chr1.2:82032032-82032051 MS.gene065137:intron 45.0%
ACCTGGTAACCTAACAGAAG+TGG + chr1.2:82030872-82030891 MS.gene065137:intron 45.0%
ACTGGGAGTCAAACTGTCAA+AGG + chr1.2:82031427-82031446 MS.gene065137:intron 45.0%
ACTTCTGTTAGGTTACCAGG+TGG - chr1.2:82030873-82030892 None:intergenic 45.0%
AGAGCAAAGAGAAAGGGAAG+AGG + chr1.2:82028098-82028117 MS.gene065137:CDS 45.0%
AGATTGAAGCTACCCTTGGA+CGG + chr1.2:82030615-82030634 MS.gene065137:intron 45.0%
AGGCTTCCCAAATAGAGCTT+GGG - chr1.2:82032067-82032086 None:intergenic 45.0%
AGTATGCCTATTACAGGAGC+CGG + chr1.2:82028854-82028873 MS.gene065137:intron 45.0%
ATACGCTACCAAGTGGGAAA+AGG + chr1.2:82032397-82032416 MS.gene065137:intron 45.0%
ATCCATTGTGACGAAAAGCG+TGG - chr1.2:82032601-82032620 None:intergenic 45.0%
ATTCAGTCCTGAGTGTGTGA+GGG + chr1.2:82032108-82032127 MS.gene065137:intron 45.0%
ATTGCGCAAAAGCTCCCATT+TGG - chr1.2:82028492-82028511 None:intergenic 45.0%
CAAAAATCTCGATCTGGACC+TGG + chr1.2:82028167-82028186 MS.gene065137:CDS 45.0%
CAACACAAAGTTTGAGAGGC+GGG + chr1.2:82031375-82031394 MS.gene065137:intron 45.0%
CACATCATTGTTGAATGCGG+AGG + chr1.2:82030961-82030980 MS.gene065137:intron 45.0%
CATCAATGCATGAGCCTATG+CGG - chr1.2:82031277-82031296 None:intergenic 45.0%
CCCAAACTTAGAGGAATTGC+AGG + chr1.2:82028239-82028258 MS.gene065137:CDS 45.0%
CCTCCTGTATGGTTCAGTTT+CGG + chr1.2:82031784-82031803 MS.gene065137:intron 45.0%
CGAATCTCGTATAGTAGCCA+AGG + chr1.2:82031082-82031101 MS.gene065137:intron 45.0%
CGGTTTCGGTTGGACAATTT+GGG + chr1.2:82028053-82028072 MS.gene065137:CDS 45.0%
CTCTTTCTTGAACCTGGTTG+TGG - chr1.2:82028080-82028099 None:intergenic 45.0%
CTGGGAGTCAAACTGTCAAA+GGG + chr1.2:82031428-82031447 MS.gene065137:intron 45.0%
CTGGTAGACATAGAAGATGC+TGG + chr1.2:82029289-82029308 MS.gene065137:CDS 45.0%
CTTCTCTACTCCCTATACCA+AGG - chr1.2:82030064-82030083 None:intergenic 45.0%
CTTGATCACTCCCTAACAGT+AGG - chr1.2:82028712-82028731 None:intergenic 45.0%
GAGTGAAGAAAAGAGTCGGT+CGG + chr1.2:82030678-82030697 MS.gene065137:intron 45.0%
GATTCCTGGCCGTAAGAAAT+GGG + chr1.2:82032796-82032815 MS.gene065137:CDS 45.0%
GCAACACAAAGTTTGAGAGG+CGG + chr1.2:82031374-82031393 MS.gene065137:intron 45.0%
GCTTATAGGAAGCCATCTTC+CGG - chr1.2:82031822-82031841 None:intergenic 45.0%
GGAGTGAAATGACTATGGCA+TGG + chr1.2:82030769-82030788 MS.gene065137:intron 45.0%
GTCTTGCTGCAGCTAGAATA+AGG - chr1.2:82031505-82031524 None:intergenic 45.0%
GTGTGATTAACCCATCAGGA+AGG + chr1.2:82029359-82029378 MS.gene065137:CDS 45.0%
GTGTGCTCTTGTACAAAGGA+TGG + chr1.2:82030993-82031012 MS.gene065137:intron 45.0%
TATGACACATCACCCAAGTC+GGG - chr1.2:82030423-82030442 None:intergenic 45.0%
TATTCAGTCCTGAGTGTGTG+AGG + chr1.2:82032107-82032126 MS.gene065137:intron 45.0%
TCCACTTCTGTTAGGTTACC+AGG - chr1.2:82030876-82030895 None:intergenic 45.0%
TCGGTTTCGGTTGGACAATT+TGG + chr1.2:82028052-82028071 MS.gene065137:CDS 45.0%
TGACAACTTCAACCTTTGGG+TGG + chr1.2:82031146-82031165 MS.gene065137:intron 45.0%
TGATTCCTGGCCGTAAGAAA+TGG + chr1.2:82032795-82032814 MS.gene065137:CDS 45.0%
TGGATTTCAAGAAGGGGAAG+AGG + chr1.2:82029309-82029328 MS.gene065137:CDS 45.0%
TGTTCCATCACTGTGATTCC+TGG + chr1.2:82032782-82032801 MS.gene065137:CDS 45.0%
TTAACCCATCAGGAAGGGAA+CGG + chr1.2:82029365-82029384 MS.gene065137:CDS 45.0%
TTAACCCATTTCTTACGGCC+AGG - chr1.2:82032803-82032822 None:intergenic 45.0%
TTGCCGAAACTGAACCATAC+AGG - chr1.2:82031790-82031809 None:intergenic 45.0%
TTGGGCAATCGTCGATAAAG+TGG - chr1.2:82028224-82028243 None:intergenic 45.0%
TTGGTATCAAGGCTCCATCA+AGG + chr1.2:82030170-82030189 MS.gene065137:intron 45.0%
! AAAGGCACACATGGATGTCA+TGG + chr1.2:82030237-82030256 MS.gene065137:intron 45.0%
! AACCGAACATTTTCACCTGC+TGG - chr1.2:82028038-82028057 None:intergenic 45.0%
! CTTCTTGGCGAAGTATTCGT+CGG - chr1.2:82032855-82032874 None:intergenic 45.0%
! GCATGGAAGTGGAAGTTGAT+CGG + chr1.2:82030786-82030805 MS.gene065137:intron 45.0%
! GCTTCCTATAAGCCTTGTGA+AGG + chr1.2:82031829-82031848 MS.gene065137:intron 45.0%
! TAGCTGCAGCAAGACTGTTT+TGG + chr1.2:82031510-82031529 MS.gene065137:intron 45.0%
! TAGGCTCATGCATTGATGAG+AGG + chr1.2:82031279-82031298 MS.gene065137:intron 45.0%
! TTCCACGCTTTTCGTCACAA+TGG + chr1.2:82032596-82032615 MS.gene065137:intron 45.0%
! TTTGGAGTGAGGACAAACGA+AGG - chr1.2:82032087-82032106 None:intergenic 45.0%
!! GTACAAGAGCACACTTTTGG+TGG - chr1.2:82030987-82031006 None:intergenic 45.0%
!! GTTGTTCGATGGTGGACATT+AGG - chr1.2:82031063-82031082 None:intergenic 45.0%
!! GTTTGTTGTGCTCTGGTTTC+AGG + chr1.2:82032670-82032689 MS.gene065137:intron 45.0%
!!! GGTTCTGGATCCAGGTTTTT+AGG - chr1.2:82031950-82031969 None:intergenic 45.0%
!!! GTGCTCTGGTTTCAGGTTTT+GGG + chr1.2:82032677-82032696 MS.gene065137:intron 45.0%
!!! TGGATCCAGGTTTTTAGGGT+TGG - chr1.2:82031945-82031964 None:intergenic 45.0%
!!! TGGTTTCAGGTTTTGGGTGA+AGG + chr1.2:82032683-82032702 MS.gene065137:intron 45.0%
!!! TGTGCTCTGGTTTCAGGTTT+TGG + chr1.2:82032676-82032695 MS.gene065137:intron 45.0%
!!! TTTTATAAAAAAACATAATA+AGG + chr1.2:82029229-82029248 MS.gene065137:intron 5.0%
!!! TTTTATAAAAATAAAAGAAA+AGG - chr1.2:82029219-82029238 None:intergenic 5.0%
AGGGCTTGTGCATGAATGCA+AGG + chr1.2:82030512-82030531 MS.gene065137:intron 50.0%
AGTTTCCGTTCCCTTCCTGA+TGG - chr1.2:82029373-82029392 None:intergenic 50.0%
ATTACCGAACAGGGGACAGT+AGG + chr1.2:82030834-82030853 MS.gene065137:intron 50.0%
CAAGGCTCCATCAAGGAGTT+GGG + chr1.2:82030177-82030196 MS.gene065137:intron 50.0%
CAATCCTACTGTCCCCTGTT+CGG - chr1.2:82030841-82030860 None:intergenic 50.0%
CAATGCTCCAAAACCCGACT+TGG + chr1.2:82030407-82030426 MS.gene065137:intron 50.0%
CATGGATGTCATGGATGGTG+AGG + chr1.2:82030246-82030265 MS.gene065137:intron 50.0%
CCGAAACTGAACCATACAGG+AGG - chr1.2:82031787-82031806 None:intergenic 50.0%
CGACGATTGCCCAAACTTAG+AGG + chr1.2:82028230-82028249 MS.gene065137:CDS 50.0%
CGAGATTCGTTGTTCGATGG+TGG - chr1.2:82031071-82031090 None:intergenic 50.0%
CTACCAAGTGGGAAAAGGCA+TGG + chr1.2:82032402-82032421 MS.gene065137:intron 50.0%
CTCCTTCGCTGATGTGGAAA+AGG - chr1.2:82032744-82032763 None:intergenic 50.0%
GAAGAGGGCTTAGGTTTGAG+AGG + chr1.2:82030003-82030022 MS.gene065137:intron 50.0%
GACAATTTGGGTCCACAACC+AGG + chr1.2:82028065-82028084 MS.gene065137:CDS 50.0%
GATTGAAGCTACCCTTGGAC+GGG + chr1.2:82030616-82030635 MS.gene065137:intron 50.0%
GCACACATGGATGTCATGGA+TGG + chr1.2:82030241-82030260 MS.gene065137:intron 50.0%
GCAGGCGTCAAAGAGTTCTT+TGG + chr1.2:82031400-82031419 MS.gene065137:intron 50.0%
GCATATCCGGCTCCTGTAAT+AGG - chr1.2:82028863-82028882 None:intergenic 50.0%
GGCAAGATTGAAGCTACCCT+TGG + chr1.2:82030611-82030630 MS.gene065137:intron 50.0%
GGCCAACTGAAGACTCATCA+GGG - chr1.2:82031726-82031745 None:intergenic 50.0%
GGTTACGAATCATGGATGGC+TGG - chr1.2:82030462-82030481 None:intergenic 50.0%
GTCATCTGTGTAGCCATGGA+AGG + chr1.2:82030365-82030384 MS.gene065137:intron 50.0%
GTTTCCGTTCCCTTCCTGAT+GGG - chr1.2:82029372-82029391 None:intergenic 50.0%
TAGGAAGCCATCTTCCGGTA+AGG - chr1.2:82031817-82031836 None:intergenic 50.0%
TCAAGCTCAATGCCACCCAA+AGG - chr1.2:82031161-82031180 None:intergenic 50.0%
TCAAGGCTCCATCAAGGAGT+TGG + chr1.2:82030176-82030195 MS.gene065137:intron 50.0%
TCCAATAGTGACCCGTCCAA+GGG - chr1.2:82030630-82030649 None:intergenic 50.0%
TCTGGACCTGGTATCATGAG+AGG + chr1.2:82028179-82028198 MS.gene065137:CDS 50.0%
TGCTCTTTGAGCCTCCTGTA+TGG + chr1.2:82031773-82031792 MS.gene065137:intron 50.0%
TGGGGAAGATGCATCTGTGT+TGG + chr1.2:82030282-82030301 MS.gene065137:intron 50.0%
TTAGTATAGTCGGGGGTCCT+TGG + chr1.2:82030044-82030063 MS.gene065137:intron 50.0%
TTCAAAGAGGCTGACCGCAT+AGG + chr1.2:82031260-82031279 MS.gene065137:intron 50.0%
TTCAGTCCTGAGTGTGTGAG+GGG + chr1.2:82032109-82032128 MS.gene065137:intron 50.0%
! AAGTGGAAGTTGATCGGCCT+AGG + chr1.2:82030792-82030811 MS.gene065137:intron 50.0%
! ACATCACCCAAGTCGGGTTT+TGG - chr1.2:82030417-82030436 None:intergenic 50.0%
! AGTGGAAGTTGATCGGCCTA+GGG + chr1.2:82030793-82030812 MS.gene065137:intron 50.0%
! CAAGGAGCGAGTTGTGGTTT+TGG + chr1.2:82028134-82028153 MS.gene065137:CDS 50.0%
! GCTTGTAGTTTGTGGGAGCT+AGG + chr1.2:82031619-82031638 MS.gene065137:intron 50.0%
! GTCGGCACGTGCAAGATTTT+TGG - chr1.2:82032837-82032856 None:intergenic 50.0%
! TGCCTTTTCCACATCAGCGA+AGG + chr1.2:82032739-82032758 MS.gene065137:CDS 50.0%
!! CTGGTCTTGTCGGTTCAGTT+AGG - chr1.2:82032026-82032045 None:intergenic 50.0%
AAGTTTGAGAGGCGGGATGC+AGG + chr1.2:82031382-82031401 MS.gene065137:intron 55.0%
ACAACTCGCTCCTTGTCCTG+CGG - chr1.2:82028129-82028148 None:intergenic 55.0%
ACCCTTGGACGGGTCACTAT+TGG + chr1.2:82030626-82030645 MS.gene065137:intron 55.0%
ACGGCCAGGAATCACAGTGA+TGG - chr1.2:82032789-82032808 None:intergenic 55.0%
AGCAGCTGCTTCTCGCTTCT+TGG - chr1.2:82032870-82032889 None:intergenic 55.0%
AGTCGGGGGTCCTTGGTATA+GGG + chr1.2:82030051-82030070 MS.gene065137:intron 55.0%
CAGGGGACAGTAGGATTGCA+AGG + chr1.2:82030843-82030862 MS.gene065137:intron 55.0%
CTCCAATAGTGACCCGTCCA+AGG - chr1.2:82030631-82030650 None:intergenic 55.0%
CTTGGACGGGTCACTATTGG+AGG + chr1.2:82030629-82030648 MS.gene065137:intron 55.0%
GACGGCCAACCCTAAAAACC+TGG + chr1.2:82031937-82031956 MS.gene065137:intron 55.0%
GCTGTTACCAGAGCAGGTTC+TGG - chr1.2:82031965-82031984 None:intergenic 55.0%
GGATTGCAAGGTCAACCACC+TGG + chr1.2:82030855-82030874 MS.gene065137:intron 55.0%
GGCCCTGATGAGTCTTCAGT+TGG + chr1.2:82031721-82031740 MS.gene065137:intron 55.0%
GGGCCAACTGAAGACTCATC+AGG - chr1.2:82031727-82031746 None:intergenic 55.0%
TAGTCGGGGGTCCTTGGTAT+AGG + chr1.2:82030050-82030069 MS.gene065137:intron 55.0%
TCTGCTTCGGTGAAACCAGC+AGG + chr1.2:82028020-82028039 MS.gene065137:CDS 55.0%
! AGTGGGAAAAGGCATGGTGG+TGG + chr1.2:82032408-82032427 MS.gene065137:intron 55.0%
! CCAAGTGGGAAAAGGCATGG+TGG + chr1.2:82032405-82032424 MS.gene065137:intron 55.0%
! CCACCATGCCTTTTCCCACT+TGG - chr1.2:82032408-82032427 None:intergenic 55.0%
! GGTGTCTCTGGAGACACTGA+CGG + chr1.2:82029330-82029349 MS.gene065137:CDS 55.0%
!! AAGGGAAGAGGTATTGCCGC+AGG + chr1.2:82028110-82028129 MS.gene065137:CDS 55.0%
!! AGAAGGGGAAGAGGTGTCTC+TGG + chr1.2:82029318-82029337 MS.gene065137:CDS 55.0%
!! AGAGGTATTGCCGCAGGACA+AGG + chr1.2:82028116-82028135 MS.gene065137:CDS 55.0%
!! TTTAGGGTTGGCCGTCGTCA+AGG - chr1.2:82031933-82031952 None:intergenic 55.0%
ACACCTCCCCTCACACACTC+AGG - chr1.2:82032118-82032137 None:intergenic 60.0%
AGTCCTGAGTGTGTGAGGGG+AGG + chr1.2:82032112-82032131 MS.gene065137:intron 60.0%
AGTTGATCGGCCTAGGGCAG+AGG + chr1.2:82030799-82030818 MS.gene065137:intron 60.0%
CCTGGATCCAGAACCTGCTC+TGG + chr1.2:82031955-82031974 MS.gene065137:intron 60.0%
GCAGGACAAGGAGCGAGTTG+TGG + chr1.2:82028128-82028147 MS.gene065137:CDS 60.0%
!! CCAGAGCAGGTTCTGGATCC+AGG - chr1.2:82031958-82031977 None:intergenic 60.0%
CATGCTCGGCAACGGCAGTG+CGG + chr1.2:82031859-82031878 MS.gene065137:intron 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 82027924 82032910 82027924 ID=MS.gene065137
chr1.2 mRNA 82027924 82032910 82027924 ID=MS.gene065137.t1;Parent=MS.gene065137
chr1.2 exon 82027924 82028263 82027924 ID=MS.gene065137.t1.exon1;Parent=MS.gene065137.t1
chr1.2 CDS 82027924 82028263 82027924 ID=cds.MS.gene065137.t1;Parent=MS.gene065137.t1
chr1.2 exon 82029251 82029402 82029251 ID=MS.gene065137.t1.exon2;Parent=MS.gene065137.t1
chr1.2 CDS 82029251 82029402 82029251 ID=cds.MS.gene065137.t1;Parent=MS.gene065137.t1
chr1.2 exon 82032692 82032910 82032692 ID=MS.gene065137.t1.exon3;Parent=MS.gene065137.t1
chr1.2 CDS 82032692 82032910 82032692 ID=cds.MS.gene065137.t1;Parent=MS.gene065137.t1
Gene Sequence

>MS.gene065137

GGAAATGTGAAAACCTTGGTAGCAAAACCATATCTATGTCCATGTCTTAAAATTCAGCGAATGAAACCTCGTGTTTTTGTTGTTAATAAGGCTGCTTCTGCTTCGGTGAAACCAGCAGGTGAAAATGTTCGGTTTCGGTTGGACAATTTGGGTCCACAACCAGGTTCAAGAAAGAGAGCAAAGAGAAAGGGAAGAGGTATTGCCGCAGGACAAGGAGCGAGTTGTGGTTTTGGAATGAGAGGTCAAAAATCTCGATCTGGACCTGGTATCATGAGAGGTTTTGAAGGTGGTCAGATGCCACTTTATCGACGATTGCCCAAACTTAGAGGAATTGCAGGAGGTATCTCTTCTTACACAACACTTGGGAATTTACCTATTGTTTTATTGTTGAAATTTGTTGTTTACGAATTTTGAAAATAATGTTTTCAACTATGGTGGTTATGATTGATTGACATTGTAATTCAATGATGGTATATACGAATTAAATTCTTACATAATACGAAGTGATGTTCAAACTTGTGTATTATACATTTTGTTAATAAGTTAATTTTTAGTCTATATACTACCAAATGGGAGCTTTTGCGCAATTGTTAGAGATGCAATTTGAGTTGAAAGTCAGATATTCATGAAATTTGCAGTATCTTAGAAATACAAGATTGAATATAATTTGCCCGCTAATAGGTTGCCCTTTTTTTACGATGTTTTGTTAAATTGTCCGTAGCATCATAATGCTTCACATGGAGTTTAAATGGATTTTGTTGAATTATATTAGGATAATTTAGGATCCTACTGTTAGGGAGTGATCAAGAAAGATGCTACATGTAGCATCATTAGTAGGAAAAAACAATGGTTAGATGAGAATTGTGATTCCTGGTTGCAGATTGATTATGTATACTTGTTGCGTGCCTACATCACATTTGAAAGTCATGAAGTATGCCTATTACAGGAGCCGGATATGCTGTTGTATATATCCCTAATATGTAGATTTTCAAAGAAATTATAGTAGATTCCCTTTATTGACATCTTGAAATGGTGATTATTGTCTGAAGAGAATCATGGCATTATGGATTATACCAAGCTTCCAATACCTAAATTTCTCTTCCTCAGTTCTTATTATGCTTGACATCTTTACTTATTCTATATTTTTTCCCCTTATTCTTCCATATCCTTCCATGATTTCATTTCAAAAGCAATTATTTTATGAAAGGTTTTTCTTTCATTCTTTGTCGTAGGATCTCTCTTAATTTATTTAGTATATGCATAAATCTCGCTTGGAATCATGTTTTAATGTTCCTTTTCTTTTATTTTTATAAAAAAACATAATAAGGTATGCATGCTGGATTGCCGAAATATGTCCACATCAATCTGGTAGACATAGAAGATGCTGGATTTCAAGAAGGGGAAGAGGTGTCTCTGGAGACACTGACGGAGAAACGTGTGATTAACCCATCAGGAAGGGAACGGAAACTTCTATTGAAGGTACACATTACTTGTTGGTTTATGGCTATCTAAGTTTTTTCCCTTAGTTGTTGTCTTACATGTTCATTTCTGTGATTGTTTTCATGATGTCTAGAGGTATTACGATGTTTCACTTTTAAAAACAAATGAGGATGGTTAATTTTCCTAGTACCCCATATATCAAGAAAGACTTCTGATATGAGGTCCCTTGTCTATCGTGAATAAAGTTACTTTCTTTAAAATTTTCATATTATGCCTTTAATCGGAGAATTTTGGTTGTGCTTAGACATATGTTGTTTGTTTATGATATGTATGTAAGTTCAAACGCAATATTTTGGTGGCTGTGTTTGTGTTTTGAATTTGAAACTGTAAAAGTTGGAATATAAGAGGTCCGTTGGTTGAAAGAGTTAAAGTTAGTTAATGGATGTTGGGATATTAGAGATGTTGAAACCGTGTTTCTCAACCGCATAATCGAGTCCGTTTTGTAAGGCTCAAAGAAATAATTACAATATAAATACAATCGATTTTATTCTTATTTATGCCTATAGTTAATCTAAAATAATCACAAAGATCCTAAACATATTTTCAACAAGAGAAATAAGGCATGTTGTCTATAAATAAGAAGAGGGCTTAGGTTTGAGAGGGAGAGATATCTTGTCATTTTAGTATAGTCGGGGGTCCTTGGTATAGGGAGTAGAGAAGATTGCAGACCTTTGAAGTTCTGTAGTTTTCCATACAAGGAAATTTTCCCTAAATGTACATTTAATTAAAATATCAATTTCTGTCTATTGGTATCAAGGCTCCATCAAGGAGTTGGGAGTATATCATTGAAGATTATGTGGCGTGAATAAGAATAAAGGCACACATGGATGTCATGGATGGTGAGGAAGTAATTTCAGTTGGGGAAGATGCATCTGTGTTGGATCAACAAGTTTGAGAGGTATTTTCATATGAAATAGGTGTTGGGAGGAGAAAGATTATAAGTCATCTGTGTAGCCATGGAAGGACAAGCTTTGTTTTTGTTTCAATGCTCCAAAACCCGACTTGGGTGATGTGTCATAATGTTATTAGGTGTTTCCAGCCATCCATGATTCGTAACCCATTTGGTATTTTGTTGGGTATGAAGCAAGAGGGCTTGTGCATGAATGCAAGGATCAATTTGACATACAGGTCAGGTTGTTGCATCTGCTACCAGATAGAATATTTAAAAGGGTTTTTCTTGAAAGGACGGCAAGATTGAAGCTACCCTTGGACGGGTCACTATTGGAGGAGATGAATTTGGAAGAAACTATAAATGAGTGAAGAAAAGAGTCGGTCGGTTTGGAAATGAGCAAAGAGAGAATTCAAGAATATAAAATGGAGAAGTAAGAAGAAAGGTGAAAGAAATGGAGTGAAATGACTATGGCATGGAAGTGGAAGTTGATCGGCCTAGGGCAGAGGAGAATAAAAAAGATTACCGAACAGGGGACAGTAGGATTGCAAGGTCAACCACCTGGTAACCTAACAGAAGTGGAATGAAAAGGAAAAGATGTCTTTATGGGTGGAACCAATGAAGAACAAAGCTGGAAGAAACATGTGTCACATCATTGTTGAATGCGGAGGCCACCAAAAGTGTGCTCTTGTACAAAGGATGGTAGACCATTACAAATTGTGAAACTCTGACCTACATGCATGAAGACCTAATGTCCACCATCGAACAACGAATCTCGTATAGTAGCCAAGGTGATATCAAAGGCAAAGATGAAGCCAAATATGTTTAGAATCTGACAACTTCAACCTTTGGGTGGCATTGAGCTTGAAGATGAAGTTGTGGGGAAACATCGTTCAAATTCTGACCTATGCTGTTGCTAAACATGAAGATGGATTGTTGGATTGTATTTCAAAGAGGCTGACCGCATAGGCTCATGCATTGATGAGAGGCAGATTAATGGACAAGACTTCCTTTATAAGAAGAGGTAGATACTGAACATTGCCAAGTATTATTCATGTAGAGCAACACAAAGTTTGAGAGGCGGGATGCAGGCGTCAAAGAGTTCTTTGGCATGACTGGGAGTCAAACTGTCAAAGGGACGAACTACTACATCAAGCTAAAAGGGACTCAGCTTTTCAACAAATTGATACCTTATTCTAGCTGCAGCAAGACTGTTTTGGTTTATTAATCTTTTTCACTTTAAGGATAAGGTGAAACTTGAGAGGAGAGTATTGATACACCTGTTAGTTGAAGGAGTTTGAGTTAAGCTTGTAGTTTGTGGGAGCTAGGATTATTAGAGAAATAATGTGTGCTGTCTATATATAAGAAGAGGCTGAAGGAGAGATATCTTGTATTTTTAATAGAGCTGGGCCCTGATGAGTCTTCAGTTGGCCCTCTTCCAACCAACTTAGAAATAGAATTGCTCTTTGAGCCTCCTGTATGGTTCAGTTTCGGCAAAAAACCTTACCGGAAGATGGCTTCCTATAAGCCTTGTGAAGGAAAATAACATGCTCGGCAACGGCAGTGCGGTCACTATTTCGAAATAGACAGCAAACATGCATAAACTTCTAGGGTTAGCCTTGACGACGGCCAACCCTAAAAACCTGGATCCAGAACCTGCTCTGGTAACAGCGTATTTAGAGTATACTCTAATATCATTTAGAATTTTGGCCTAACTGAACCGACAAGACCAGTTTGTAAGGTAAAGAATGCCCAAGCTCTATTTGGGAAGCCTTCGTTTGTCCTCACTCCAAATATTCAGTCCTGAGTGTGTGAGGGGAGGTGTTGAGATTTTACACTAACTAGAGAGTGAGTGTTAAAAGATAAGAAATTAATCATATGAGATGCTTCAAGATACTGTAACATACACAATATTACAACTTTACCAATACTTTTCATATCTACGAATACTAGTAATTCATTTCTAAAGTGATATTTAGCGGTTGAAAGAAACTGTAGCATGTTCTGGAAAATTACTGCACTACTTCTAGCATCATGAATTTTGTTGGTTCAGTTTTATCGTATTCGTTATCTGTAAACATATAATACGCTACCAAGTGGGAAAAGGCATGGTGGTGGTTGTTGCTACAATTGCCATTATTTGAAAGAGCTCTTCTGGTTTCCTCATAAACTCAGGAAAATATTTGCAAAAAACATAGTTTCAATTTCAAACAACTTATACAGGCTAGCATTTAGCAAGTTGTATACTTCTAATTAGTCATGCATTGGGCACTGAACACAAAGTTCCACGCTTTTCGTCACAATGGATCAAGTACACATACACAATATATTTTTAAAAAGGAAATATAAAAATAATAGTTTGTTGTGCTCTGGTTTCAGGTTTTGGGTGAAGGAGAACTAAGCAAGAAGTTGACAATAAAAGCTGGTGCCTTTTCCACATCAGCGAAGGAGAAACTTGAGTCTGCTGGTTGTTCCATCACTGTGATTCCTGGCCGTAAGAAATGGGTTAAGCCATCAGTTGCCAAAAATCTTGCACGTGCCGACGAATACTTCGCCAAGAAGCGAGAAGCAGCTGCTTCTGAACCAGATTCTGTTTAA

Protein sequence

>MS.gene065137.t1

GNVKTLVAKPYLCPCLKIQRMKPRVFVVNKAASASVKPAGENVRFRLDNLGPQPGSRKRAKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRLPKLRGIAGGMHAGLPKYVHINLVDIEDAGFQEGEEVSLETLTEKRVINPSGRERKLLLKVLGEGELSKKLTIKAGAFSTSAKEKLESAGCSITVIPGRKKWVKPSVAKNLARADEYFAKKREAAASEPDSV