AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene75021


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75021.t1 MTR_1g110750 94.419 215 12 0 2 216 43 257 8.68e-145 404
MS.gene75021.t1 MTR_4g118060 32.639 144 88 5 37 177 74 211 1.47e-11 62.8
MS.gene75021.t1 MTR_1g085490 32.639 144 88 5 37 177 74 211 1.53e-11 62.8
MS.gene75021.t1 MTR_1g031890 32.639 144 88 5 37 177 74 211 1.55e-11 62.4
MS.gene75021.t1 MTR_1g031890 32.639 144 88 5 37 177 74 211 1.69e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75021.t1 AT3G25920 77.612 201 43 1 2 202 60 258 1.47e-108 313

Find 57 sgRNAs with CRISPR-Local

Find 389 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGGTTTCGGTTGGACAATT+TGG 0.209684 1.2:+82018064 MS.gene75021:CDS
CAAGGAGCGAGTTGTGGTTT+TGG 0.247810 1.2:+82018146 MS.gene75021:CDS
TCCTGCAATTCCTCTAAGTT+TGG 0.258498 1.2:-82018252 None:intergenic
CGGTTTCGGTTGGACAATTT+GGG 0.284648 1.2:+82018065 MS.gene75021:CDS
AGCAGCTGCTTCTCGCTTCT+TGG 0.291577 1.2:-82022845 None:intergenic
TTGCATATTTAAACAGAATC+TGG 0.313222 1.2:-82022874 None:intergenic
CGACGATTGCCCAAACTTAG+AGG 0.316218 1.2:+82018242 MS.gene75021:CDS
AGATTGATGTGGACATATTT+CGG 0.336463 1.2:-82019246 None:intergenic
CTCTTTCTTGAACCTGGTTG+TGG 0.358662 1.2:-82018089 None:intergenic
TGTTCCATCACTGTGATTCC+TGG 0.369456 1.2:+82022760 MS.gene75021:CDS
CCCAAACTTAGAGGAATTGC+AGG 0.376415 1.2:+82018251 MS.gene75021:CDS
TGATTCCTGGCCGTAAGAAA+TGG 0.380224 1.2:+82022773 MS.gene75021:CDS
CCTGCAATTCCTCTAAGTTT+GGG 0.397805 1.2:-82018251 None:intergenic
CTCCTTCGCTGATGTGGAAA+AGG 0.406202 1.2:-82022719 None:intergenic
TTTGCTCTCTTTCTTGAACC+TGG 0.419614 1.2:-82018095 None:intergenic
TAATAAGGCTGCTTCTGCTT+CGG 0.436199 1.2:+82018019 MS.gene75021:CDS
AAGAAAGAGAGCAAAGAGAA+AGG 0.443452 1.2:+82018103 MS.gene75021:CDS
ATGGCTTAACCCATTTCTTA+CGG 0.452810 1.2:-82022783 None:intergenic
AACCAGCAGGTGAAAATGTT+CGG 0.456863 1.2:+82018045 MS.gene75021:CDS
AGAAGGGGAAGAGGTGTCTC+TGG 0.461261 1.2:+82019296 MS.gene75021:CDS
CAGGTGAAAATGTTCGGTTT+CGG 0.473561 1.2:+82018051 MS.gene75021:CDS
GACAATTTGGGTCCACAACC+AGG 0.479320 1.2:+82018077 MS.gene75021:CDS
AGAAAGAGAGCAAAGAGAAA+GGG 0.484644 1.2:+82018104 MS.gene75021:CDS
TGAAAATGTTCGGTTTCGGT+TGG 0.487169 1.2:+82018055 MS.gene75021:CDS
AAGTTTCTCCTTCGCTGATG+TGG 0.489671 1.2:-82022725 None:intergenic
TTAACCCATTTCTTACGGCC+AGG 0.492636 1.2:-82022778 None:intergenic
GAAATATGTCCACATCAATC+TGG 0.495258 1.2:+82019248 MS.gene75021:CDS
GGAACGGAAACTTCTATTGA+AGG 0.496485 1.2:+82019359 MS.gene75021:CDS
AGTTTCCGTTCCCTTCCTGA+TGG 0.497026 1.2:-82019348 None:intergenic
ACATAATAAGGTATGCATGC+TGG 0.501018 1.2:+82019219 MS.gene75021:intron
TCTGCTTCGGTGAAACCAGC+AGG 0.507750 1.2:+82018032 MS.gene75021:CDS
AGAGCAAAGAGAAAGGGAAG+AGG 0.509714 1.2:+82018110 MS.gene75021:CDS
GATTCCTGGCCGTAAGAAAT+GGG 0.511756 1.2:+82022774 MS.gene75021:CDS
GAAGATGCTGGATTTCAAGA+AGG 0.525528 1.2:+82019279 MS.gene75021:CDS
AAGGAGAAACTTGAGTCTGC+TGG 0.526406 1.2:+82022736 MS.gene75021:CDS
CTGGTAGACATAGAAGATGC+TGG 0.527862 1.2:+82019267 MS.gene75021:CDS
AAACGTGTGATTAACCCATC+AGG 0.531753 1.2:+82019333 MS.gene75021:CDS
AAGATGCTGGATTTCAAGAA+GGG 0.537870 1.2:+82019280 MS.gene75021:CDS
GTTTCCGTTCCCTTCCTGAT+GGG 0.539207 1.2:-82019347 None:intergenic
AGAGGTATTGCCGCAGGACA+AGG 0.557884 1.2:+82018128 MS.gene75021:CDS
TTGGGCAATCGTCGATAAAG+TGG 0.564517 1.2:-82018233 None:intergenic
AAGAAGTTGACAATAAAAGC+TGG 0.573815 1.2:+82022694 MS.gene75021:CDS
GCAGGACAAGGAGCGAGTTG+TGG 0.577933 1.2:+82018140 MS.gene75021:CDS
TGGATTTCAAGAAGGGGAAG+AGG 0.578835 1.2:+82019287 MS.gene75021:CDS
AAGGGAAGAGGTATTGCCGC+AGG 0.588347 1.2:+82018122 MS.gene75021:CDS
GGTGTCTCTGGAGACACTGA+CGG 0.598433 1.2:+82019308 MS.gene75021:CDS
GTGTGATTAACCCATCAGGA+AGG 0.611754 1.2:+82019337 MS.gene75021:CDS
CTTCTTGGCGAAGTATTCGT+CGG 0.627986 1.2:-82022830 None:intergenic
ACGGCCAGGAATCACAGTGA+TGG 0.630385 1.2:-82022764 None:intergenic
TGTGATTAACCCATCAGGAA+GGG 0.634878 1.2:+82019338 MS.gene75021:CDS
TCTGGACCTGGTATCATGAG+AGG 0.634957 1.2:+82018191 MS.gene75021:CDS
TCAAAACCTCTCATGATACC+AGG 0.646172 1.2:-82018197 None:intergenic
CTATGTCTACCAGATTGATG+TGG 0.650882 1.2:-82019257 None:intergenic
TTAACCCATCAGGAAGGGAA+CGG 0.658603 1.2:+82019343 MS.gene75021:CDS
AGATGCTGGATTTCAAGAAG+GGG 0.662527 1.2:+82019281 MS.gene75021:CDS
ACAACTCGCTCCTTGTCCTG+CGG 0.686055 1.2:-82018138 None:intergenic
AAACTTAGAGGAATTGCAGG+AGG 0.696930 1.2:+82018254 MS.gene75021:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATTAAATGTACATTTA+GGG - chr1.2:82020111-82020130 None:intergenic 10.0%
!!! TACACAATATATTTTTAAAA+AGG + chr1.2:82022609-82022628 MS.gene75021:intron 10.0%
!!! TTTTAATTAAATGTACATTT+AGG - chr1.2:82020112-82020131 None:intergenic 10.0%
!! AATTTCAACAATAAAACAAT+AGG - chr1.2:82018311-82018330 None:intergenic 15.0%
!! GAATTATATTAGGATAATTT+AGG + chr1.2:82018696-82018715 MS.gene75021:intron 15.0%
!!! AAAAGCAATTATTTTATGAA+AGG + chr1.2:82019087-82019106 MS.gene75021:intron 15.0%
!!! GATTATTTTAGATTAACTAT+AGG - chr1.2:82019904-82019923 None:intergenic 15.0%
!!! TATTAATCTTTTTCACTTTA+AGG + chr1.2:82021513-82021532 MS.gene75021:intron 15.0%
!! AAAGAGTTAAAGTTAGTTAA+TGG + chr1.2:82019761-82019780 MS.gene75021:intron 20.0%
!! AAATATCAATTTCTGTCTAT+TGG + chr1.2:82020129-82020148 MS.gene75021:intron 20.0%
!! AACAAAACATCGTAAAAAAA+GGG - chr1.2:82018624-82018643 None:intergenic 20.0%
!! ACCAGATAGAATATTTAAAA+GGG + chr1.2:82020550-82020569 MS.gene75021:intron 20.0%
!! GAGAATTCAAGAATATAAAA+TGG + chr1.2:82020697-82020716 MS.gene75021:intron 20.0%
!! TAACAAAACATCGTAAAAAA+AGG - chr1.2:82018625-82018644 None:intergenic 20.0%
!! TACCAGATAGAATATTTAAA+AGG + chr1.2:82020549-82020568 MS.gene75021:intron 20.0%
!! TTTCATATTATGCCTTTAAT+CGG + chr1.2:82019603-82019622 MS.gene75021:intron 20.0%
!!! ATTTCTAAAGTGATATTTAG+CGG + chr1.2:82022250-82022269 MS.gene75021:intron 20.0%
!!! CTTTGAAAATCTACATATTA+GGG - chr1.2:82018876-82018895 None:intergenic 20.0%
!!! GAAAATAATGTTTTCAACTA+TGG + chr1.2:82018348-82018367 MS.gene75021:intron 20.0%
!!! GGATTTTGTTGAATTATATT+AGG + chr1.2:82018686-82018705 MS.gene75021:intron 20.0%
!!! TATTTTCAACAAGAGAAATA+AGG + chr1.2:82019940-82019959 MS.gene75021:intron 20.0%
!!! TCTTTGAAAATCTACATATT+AGG - chr1.2:82018877-82018896 None:intergenic 20.0%
!!! TTCACTTTTAAAAACAAATG+AGG + chr1.2:82019489-82019508 MS.gene75021:intron 20.0%
! AAAAGGAAAAGATGTCTTTA+TGG + chr1.2:82020877-82020896 MS.gene75021:intron 25.0%
! AAAGGAAAAGATGTCTTTAT+GGG + chr1.2:82020878-82020897 MS.gene75021:intron 25.0%
! AATAAAAAAGATTACCGAAC+AGG + chr1.2:82020802-82020821 MS.gene75021:intron 25.0%
! AGAAGTCTTTCTTGATATAT+GGG - chr1.2:82019535-82019554 None:intergenic 25.0%
! ATAAAAAAGATTACCGAACA+GGG + chr1.2:82020803-82020822 MS.gene75021:intron 25.0%
! CAATTTCAAACAACTTATAC+AGG + chr1.2:82022492-82022511 MS.gene75021:intron 25.0%
! CATTTCAAGATGTCAATAAA+GGG - chr1.2:82018914-82018933 None:intergenic 25.0%
! CTCTTGTTGAAAATATGTTT+AGG - chr1.2:82019935-82019954 None:intergenic 25.0%
! GTATATCATTGAAGATTATG+TGG + chr1.2:82020179-82020198 MS.gene75021:intron 25.0%
! GTTGTCTATAAATAAGAAGA+GGG + chr1.2:82019966-82019985 MS.gene75021:intron 25.0%
! TAGTCTATATACTACCAAAT+GGG + chr1.2:82018487-82018506 MS.gene75021:intron 25.0%
! TCATTAGTAGGAAAAAACAA+TGG + chr1.2:82018763-82018782 MS.gene75021:intron 25.0%
! TGATGTGTCATAATGTTATT+AGG + chr1.2:82020409-82020428 MS.gene75021:intron 25.0%
! TGTAAAAGTTGGAATATAAG+AGG + chr1.2:82019727-82019746 MS.gene75021:intron 25.0%
! TGTCAGATTCTAAACATATT+TGG - chr1.2:82021109-82021128 None:intergenic 25.0%
! TGTTGTCTATAAATAAGAAG+AGG + chr1.2:82019965-82019984 MS.gene75021:intron 25.0%
! TTAGTCTATATACTACCAAA+TGG + chr1.2:82018486-82018505 MS.gene75021:intron 25.0%
! TTATTAACAACAAAAACACG+AGG - chr1.2:82018005-82018024 None:intergenic 25.0%
! TTGACATTGTAATTCAATGA+TGG + chr1.2:82018384-82018403 MS.gene75021:intron 25.0%
! TTTCATATGAAATAGGTGTT+GGG + chr1.2:82020304-82020323 MS.gene75021:intron 25.0%
!! AAAGTTAGTTAATGGATGTT+GGG + chr1.2:82019769-82019788 MS.gene75021:intron 25.0%
!! AATAATGTTTTCAACTATGG+TGG + chr1.2:82018351-82018370 MS.gene75021:intron 25.0%
!! AATATTTTCCTGAGTTTATG+AGG - chr1.2:82022455-82022474 None:intergenic 25.0%
!! ACCCTTTTAAATATTCTATC+TGG - chr1.2:82020554-82020573 None:intergenic 25.0%
!! GAATTTGAAACTGTAAAAGT+TGG + chr1.2:82019716-82019735 MS.gene75021:intron 25.0%
!! TAAAGTTAGTTAATGGATGT+TGG + chr1.2:82019768-82019787 MS.gene75021:intron 25.0%
!! TAAGTTCAAACGCAATATTT+TGG + chr1.2:82019675-82019694 MS.gene75021:intron 25.0%
!! TTAAAAGGGTTTTTCTTGAA+AGG + chr1.2:82020564-82020583 MS.gene75021:intron 25.0%
!! TTCGTAGATATGAAAAGTAT+TGG - chr1.2:82022218-82022237 None:intergenic 25.0%
!! TTTTCATATGAAATAGGTGT+TGG + chr1.2:82020303-82020322 MS.gene75021:intron 25.0%
!!! AATTCTATTTCTAAGTTGGT+TGG - chr1.2:82021732-82021751 None:intergenic 25.0%
!!! CTTGTATTTTTAATAGAGCT+GGG + chr1.2:82021678-82021697 MS.gene75021:intron 25.0%
!!! CTTTTAAAAACAAATGAGGA+TGG + chr1.2:82019493-82019512 MS.gene75021:intron 25.0%
!!! GAGGTATTTTCATATGAAAT+AGG + chr1.2:82020297-82020316 MS.gene75021:intron 25.0%
!!! TCGTGTTTTTGTTGTTAATA+AGG + chr1.2:82018004-82018023 MS.gene75021:CDS 25.0%
!!! TCTTGTATTTTTAATAGAGC+TGG + chr1.2:82021677-82021696 MS.gene75021:intron 25.0%
!!! TCTTGTCATTTTAGTATAGT+CGG + chr1.2:82020012-82020031 MS.gene75021:intron 25.0%
!!! TCTTTTTCACTTTAAGGATA+AGG + chr1.2:82021519-82021538 MS.gene75021:intron 25.0%
!!! TTGCTTTTGAAATGAAATCA+TGG - chr1.2:82019075-82019094 None:intergenic 25.0%
!!! TTTTGAAATGAAATCATGGA+AGG - chr1.2:82019071-82019090 None:intergenic 25.0%
AAATGAGTGAAGAAAAGAGT+CGG + chr1.2:82020652-82020671 MS.gene75021:intron 30.0%
AAATGGAGAAGTAAGAAGAA+AGG + chr1.2:82020714-82020733 MS.gene75021:intron 30.0%
AACATGTAAGACAACAACTA+AGG - chr1.2:82019425-82019444 None:intergenic 30.0%
AACCAAAATTCTCCGATTAA+AGG - chr1.2:82019618-82019637 None:intergenic 30.0%
AACTACTACATCAAGCTAAA+AGG + chr1.2:82021432-82021451 MS.gene75021:intron 30.0%
AACTTTATTCACGATAGACA+AGG - chr1.2:82019569-82019588 None:intergenic 30.0%
AAGAAGAAAGGTGAAAGAAA+TGG + chr1.2:82020726-82020745 MS.gene75021:intron 30.0%
AAGAAGTTGACAATAAAAGC+TGG + chr1.2:82022694-82022713 MS.gene75021:CDS 30.0%
AAGACTTCCTTTATAAGAAG+AGG + chr1.2:82021293-82021312 MS.gene75021:intron 30.0%
AATGAAATCATGGAAGGATA+TGG - chr1.2:82019065-82019084 None:intergenic 30.0%
ACATGTAAGACAACAACTAA+GGG - chr1.2:82019424-82019443 None:intergenic 30.0%
ACTACTACATCAAGCTAAAA+GGG + chr1.2:82021433-82021452 MS.gene75021:intron 30.0%
ACTTCTAATTAGTCATGCAT+TGG + chr1.2:82022536-82022555 MS.gene75021:intron 30.0%
ACTTTAACTCTTTCAACCAA+CGG - chr1.2:82019754-82019773 None:intergenic 30.0%
ACTTTATTCACGATAGACAA+GGG - chr1.2:82019568-82019587 None:intergenic 30.0%
AGAAGAGCTCTTTCAAATAA+TGG - chr1.2:82022427-82022446 None:intergenic 30.0%
AGATTGATGTGGACATATTT+CGG - chr1.2:82019249-82019268 None:intergenic 30.0%
AGGAAGAGAAATTTAGGTAT+TGG - chr1.2:82018986-82019005 None:intergenic 30.0%
ATACCCAACAAAATACCAAA+TGG - chr1.2:82020462-82020481 None:intergenic 30.0%
ATGACTTTCAAATGTGATGT+AGG - chr1.2:82018810-82018829 None:intergenic 30.0%
ATTATTTGAAAGAGCTCTTC+TGG + chr1.2:82022426-82022445 MS.gene75021:intron 30.0%
ATTTCTGTCTATTGGTATCA+AGG + chr1.2:82020137-82020156 MS.gene75021:intron 30.0%
CAAACATGCATAAACTTCTA+GGG + chr1.2:82021881-82021900 MS.gene75021:intron 30.0%
CAGAAGTCTTTCTTGATATA+TGG - chr1.2:82019536-82019555 None:intergenic 30.0%
CAGAGTTTCACAATTTGTAA+TGG - chr1.2:82021001-82021020 None:intergenic 30.0%
CCATTTCAAGATGTCAATAA+AGG - chr1.2:82018915-82018934 None:intergenic 30.0%
CCTTTATTGACATCTTGAAA+TGG + chr1.2:82018912-82018931 MS.gene75021:intron 30.0%
CTTCTAATTAGTCATGCATT+GGG + chr1.2:82022537-82022556 MS.gene75021:intron 30.0%
GAAGTCTTTCTTGATATATG+GGG - chr1.2:82019534-82019553 None:intergenic 30.0%
GATATATACAACAGCATATC+CGG - chr1.2:82018854-82018873 None:intergenic 30.0%
GTATCTACCTCTTCTTATAA+AGG - chr1.2:82021303-82021322 None:intergenic 30.0%
TAAAAAAGATTACCGAACAG+GGG + chr1.2:82020804-82020823 MS.gene75021:intron 30.0%
TACCCAACAAAATACCAAAT+GGG - chr1.2:82020461-82020480 None:intergenic 30.0%
TATAAATAAGAAGAGGGCTT+AGG + chr1.2:82019972-82019991 MS.gene75021:intron 30.0%
TATATATAAGAAGAGGCTGA+AGG + chr1.2:82021647-82021666 MS.gene75021:intron 30.0%
TGCTCTACATGAATAATACT+TGG - chr1.2:82021335-82021354 None:intergenic 30.0%
TGCTGTCTATATATAAGAAG+AGG + chr1.2:82021640-82021659 MS.gene75021:intron 30.0%
TGTTGGATTGTATTTCAAAG+AGG + chr1.2:82021225-82021244 MS.gene75021:intron 30.0%
TTAGGGAAAATTTCCTTGTA+TGG - chr1.2:82020094-82020113 None:intergenic 30.0%
TTATTGTCTGAAGAGAATCA+TGG + chr1.2:82018938-82018957 MS.gene75021:intron 30.0%
TTTCTTTCATTCTTTGTCGT+AGG + chr1.2:82019112-82019131 MS.gene75021:intron 30.0%
TTTCTTTGAGCCTTACAAAA+CGG - chr1.2:82019840-82019859 None:intergenic 30.0%
! AACCCATTTGGTATTTTGTT+GGG + chr1.2:82020456-82020475 MS.gene75021:intron 30.0%
! AATAAGAATAAAGGCACACA+TGG + chr1.2:82020206-82020225 MS.gene75021:intron 30.0%
! AATATAATTTGCCCGCTAAT+AGG + chr1.2:82018595-82018614 MS.gene75021:intron 30.0%
! AATTTAGGATCCTACTGTTA+GGG + chr1.2:82018711-82018730 MS.gene75021:intron 30.0%
! ATTGTTTTCATGATGTCTAG+AGG + chr1.2:82019455-82019474 MS.gene75021:intron 30.0%
! TAACCCATTTGGTATTTTGT+TGG + chr1.2:82020455-82020474 MS.gene75021:intron 30.0%
! TAATTTAGGATCCTACTGTT+AGG + chr1.2:82018710-82018729 MS.gene75021:intron 30.0%
! TCTAGCATCATGAATTTTGT+TGG + chr1.2:82022316-82022335 MS.gene75021:intron 30.0%
!! AAATTTAGGTATTGGAAGCT+TGG - chr1.2:82018978-82018997 None:intergenic 30.0%
!! AATAATAGTTTGTTGTGCTC+TGG + chr1.2:82022641-82022660 MS.gene75021:intron 30.0%
!! ACACATTACTTGTTGGTTTA+TGG + chr1.2:82019383-82019402 MS.gene75021:intron 30.0%
!! GAGCAATTCTATTTCTAAGT+TGG - chr1.2:82021736-82021755 None:intergenic 30.0%
!! TAAACATGAAGATGGATTGT+TGG + chr1.2:82021208-82021227 MS.gene75021:intron 30.0%
!!! CTTGTCATTTTAGTATAGTC+GGG + chr1.2:82020013-82020032 MS.gene75021:intron 30.0%
!!! TTGTCATTTTAGTATAGTCG+GGG + chr1.2:82020014-82020033 MS.gene75021:intron 30.0%
AAAAAAGGGCAACCTATTAG+CGG - chr1.2:82018610-82018629 None:intergenic 35.0%
AAAGAAACTGTAGCATGTTC+TGG + chr1.2:82022276-82022295 MS.gene75021:intron 35.0%
AAGAAAGAGAGCAAAGAGAA+AGG + chr1.2:82018103-82018122 MS.gene75021:CDS 35.0%
AAGATGCTGGATTTCAAGAA+GGG + chr1.2:82019280-82019299 MS.gene75021:CDS 35.0%
AATCTGACAACTTCAACCTT+TGG + chr1.2:82021120-82021139 MS.gene75021:intron 35.0%
ACATAATAAGGTATGCATGC+TGG + chr1.2:82019219-82019238 MS.gene75021:intron 35.0%
ACATATAATACGCTACCAAG+TGG + chr1.2:82022368-82022387 MS.gene75021:intron 35.0%
ACTATTGGAGGAGATGAATT+TGG + chr1.2:82020619-82020638 MS.gene75021:intron 35.0%
AGAAAGAGAGCAAAGAGAAA+GGG + chr1.2:82018104-82018123 MS.gene75021:CDS 35.0%
ATCAATTTGACATACAGGTC+AGG + chr1.2:82020513-82020532 MS.gene75021:intron 35.0%
ATCTCTTCTTACACAACACT+TGG + chr1.2:82018278-82018297 MS.gene75021:intron 35.0%
ATCTGACAACTTCAACCTTT+GGG + chr1.2:82021121-82021140 MS.gene75021:intron 35.0%
ATGGCTTAACCCATTTCTTA+CGG - chr1.2:82022786-82022805 None:intergenic 35.0%
ATTGATGAGAGGCAGATTAA+TGG + chr1.2:82021268-82021287 MS.gene75021:intron 35.0%
CAAGAAAGACTTCTGATATG+AGG + chr1.2:82019541-82019560 MS.gene75021:intron 35.0%
CAAGGATCAATTTGACATAC+AGG + chr1.2:82020508-82020527 MS.gene75021:intron 35.0%
CATATAATACGCTACCAAGT+GGG + chr1.2:82022369-82022388 MS.gene75021:intron 35.0%
CTAACAGAAGTGGAATGAAA+AGG + chr1.2:82020860-82020879 MS.gene75021:intron 35.0%
CTACTTGTAGCATCATTAGT+AGG + chr1.2:82018751-82018770 MS.gene75021:intron 35.0%
GAAATATGTCCACATCAATC+TGG + chr1.2:82019248-82019267 MS.gene75021:CDS 35.0%
GAAATGGAGTGAAATGACTA+TGG + chr1.2:82020742-82020761 MS.gene75021:intron 35.0%
GAACTGAGGAAGAGAAATTT+AGG - chr1.2:82018992-82019011 None:intergenic 35.0%
GAAGGATATGGAAGAATAAG+GGG - chr1.2:82019053-82019072 None:intergenic 35.0%
GCAAACATGCATAAACTTCT+AGG + chr1.2:82021880-82021899 MS.gene75021:intron 35.0%
GCATTCTTTACCTTACAAAC+TGG - chr1.2:82022023-82022042 None:intergenic 35.0%
GGAAAACTACAGAACTTCAA+AGG - chr1.2:82020073-82020092 None:intergenic 35.0%
GGAAGGATATGGAAGAATAA+GGG - chr1.2:82019054-82019073 None:intergenic 35.0%
GTATATGCATAAATCTCGCT+TGG + chr1.2:82019154-82019173 MS.gene75021:intron 35.0%
GTCAAGCATAATAAGAACTG+AGG - chr1.2:82019006-82019025 None:intergenic 35.0%
GTGAAGGAAAATAACATGCT+CGG + chr1.2:82021823-82021842 MS.gene75021:intron 35.0%
GTGAGGAAGTAATTTCAGTT+GGG + chr1.2:82020241-82020260 MS.gene75021:intron 35.0%
TAGCATCATAATGCTTCACA+TGG + chr1.2:82018654-82018673 MS.gene75021:intron 35.0%
TCATGAAGTATGCCTATTAC+AGG + chr1.2:82018826-82018845 MS.gene75021:intron 35.0%
TCTCTTCTTACACAACACTT+GGG + chr1.2:82018279-82018298 MS.gene75021:intron 35.0%
TGAAGAGAATCATGGCATTA+TGG + chr1.2:82018946-82018965 MS.gene75021:intron 35.0%
TGAGGAAGTAATTTCAGTTG+GGG + chr1.2:82020242-82020261 MS.gene75021:intron 35.0%
TGAGTTAAGCTTGTAGTTTG+TGG + chr1.2:82021589-82021608 MS.gene75021:intron 35.0%
TGCTTCACATGGAGTTTAAA+TGG + chr1.2:82018665-82018684 MS.gene75021:intron 35.0%
TGGAAGGATATGGAAGAATA+AGG - chr1.2:82019055-82019074 None:intergenic 35.0%
TGTCACATCATTGTTGAATG+CGG + chr1.2:82020936-82020955 MS.gene75021:intron 35.0%
TGTGGCGTGAATAAGAATAA+AGG + chr1.2:82020197-82020216 MS.gene75021:intron 35.0%
TTCATGTTTAGCAACAGCAT+AGG - chr1.2:82021198-82021217 None:intergenic 35.0%
TTGATACACCTGTTAGTTGA+AGG + chr1.2:82021562-82021581 MS.gene75021:intron 35.0%
! AAAAGTGTGCTCTTGTACAA+AGG + chr1.2:82020967-82020986 MS.gene75021:intron 35.0%
! AAGGGTTTTTCTTGAAAGGA+CGG + chr1.2:82020568-82020587 MS.gene75021:intron 35.0%
! ATAATCGAGTCCGTTTTGTA+AGG + chr1.2:82019827-82019846 MS.gene75021:intron 35.0%
! CTTTTCATTCCACTTCTGTT+AGG - chr1.2:82020862-82020881 None:intergenic 35.0%
! GAGTTAAGCTTGTAGTTTGT+GGG + chr1.2:82021590-82021609 MS.gene75021:intron 35.0%
! GTTCTGTAGTTTTCCATACA+AGG + chr1.2:82020078-82020097 MS.gene75021:intron 35.0%
! TGAAGGTACACATTACTTGT+TGG + chr1.2:82019376-82019395 MS.gene75021:intron 35.0%
! TGCCTTTAATCGGAGAATTT+TGG + chr1.2:82019613-82019632 MS.gene75021:intron 35.0%
! TGTGAAGCATTATGATGCTA+CGG - chr1.2:82018654-82018673 None:intergenic 35.0%
! TTCTTGATATATGGGGTACT+AGG - chr1.2:82019527-82019546 None:intergenic 35.0%
! TTTTCCTTCACAAGGCTTAT+AGG - chr1.2:82021814-82021833 None:intergenic 35.0%
!! ATTTCTAAGTTGGTTGGAAG+AGG - chr1.2:82021726-82021745 None:intergenic 35.0%
!! GTTCAAACGCAATATTTTGG+TGG + chr1.2:82019678-82019697 MS.gene75021:intron 35.0%
!! TTTCTAAGTTGGTTGGAAGA+GGG - chr1.2:82021725-82021744 None:intergenic 35.0%
!! TTTGTACAAGAGCACACTTT+TGG - chr1.2:82020968-82020987 None:intergenic 35.0%
!!! GCATGTTATTTTCCTTCACA+AGG - chr1.2:82021822-82021841 None:intergenic 35.0%
!!! TGTCATTTTAGTATAGTCGG+GGG + chr1.2:82020015-82020034 MS.gene75021:intron 35.0%
AAAAAGGGCAACCTATTAGC+GGG - chr1.2:82018609-82018628 None:intergenic 40.0%
AAACAAAGCTTGTCCTTCCA+TGG - chr1.2:82020359-82020378 None:intergenic 40.0%
AAACGTGTGATTAACCCATC+AGG + chr1.2:82019333-82019352 MS.gene75021:CDS 40.0%
AAACTTAGAGGAATTGCAGG+AGG + chr1.2:82018254-82018273 MS.gene75021:CDS 40.0%
AAAGAGTTCTTTGGCATGAC+TGG + chr1.2:82021387-82021406 MS.gene75021:intron 40.0%
AAATGACTATGGCATGGAAG+TGG + chr1.2:82020753-82020772 MS.gene75021:intron 40.0%
AACCAGCAGGTGAAAATGTT+CGG + chr1.2:82018045-82018064 MS.gene75021:CDS 40.0%
AAGAATGCCCAAGCTCTATT+TGG + chr1.2:82022035-82022054 MS.gene75021:intron 40.0%
AAGAGTTCTTTGGCATGACT+GGG + chr1.2:82021388-82021407 MS.gene75021:intron 40.0%
AGAATGCCCAAGCTCTATTT+GGG + chr1.2:82022036-82022055 MS.gene75021:intron 40.0%
AGAGCAACACAAAGTTTGAG+AGG + chr1.2:82021349-82021368 MS.gene75021:intron 40.0%
AGAGGTCAAAAATCTCGATC+TGG + chr1.2:82018173-82018192 MS.gene75021:CDS 40.0%
AGATGCTGGATTTCAAGAAG+GGG + chr1.2:82019281-82019300 MS.gene75021:CDS 40.0%
AGCTTGAAGATGAAGTTGTG+GGG + chr1.2:82021152-82021171 MS.gene75021:intron 40.0%
AGGATAAGGTGAAACTTGAG+AGG + chr1.2:82021533-82021552 MS.gene75021:intron 40.0%
AGTAGCCAAGGTGATATCAA+AGG + chr1.2:82021072-82021091 MS.gene75021:intron 40.0%
ATAAGTCATCTGTGTAGCCA+TGG + chr1.2:82020339-82020358 MS.gene75021:intron 40.0%
ATACGAGATTCGTTGTTCGA+TGG - chr1.2:82021052-82021071 None:intergenic 40.0%
ATATACTCCCAACTCCTTGA+TGG - chr1.2:82020165-82020184 None:intergenic 40.0%
CAAAAAACCTTACCGGAAGA+TGG + chr1.2:82021785-82021804 MS.gene75021:intron 40.0%
CACACTCAGGACTGAATATT+TGG - chr1.2:82022083-82022102 None:intergenic 40.0%
CAGGTGAAAATGTTCGGTTT+CGG + chr1.2:82018051-82018070 MS.gene75021:CDS 40.0%
CATTAGGTCTTCATGCATGT+AGG - chr1.2:82021025-82021044 None:intergenic 40.0%
CCTGCAATTCCTCTAAGTTT+GGG - chr1.2:82018254-82018273 None:intergenic 40.0%
CTATGTCTACCAGATTGATG+TGG - chr1.2:82019260-82019279 None:intergenic 40.0%
CTCAAACTCCTTCAACTAAC+AGG - chr1.2:82021573-82021592 None:intergenic 40.0%
CTTTGCCTTTGATATCACCT+TGG - chr1.2:82021080-82021099 None:intergenic 40.0%
GAAAATAACATGCTCGGCAA+CGG + chr1.2:82021829-82021848 MS.gene75021:intron 40.0%
GAACCAATGAAGAACAAAGC+TGG + chr1.2:82020903-82020922 MS.gene75021:intron 40.0%
GAAGATGCTGGATTTCAAGA+AGG + chr1.2:82019279-82019298 MS.gene75021:CDS 40.0%
GAGCTTGAAGATGAAGTTGT+GGG + chr1.2:82021151-82021170 MS.gene75021:intron 40.0%
GATTATGCGGTTGAGAAACA+CGG - chr1.2:82019813-82019832 None:intergenic 40.0%
GCTGTTGCTAAACATGAAGA+TGG + chr1.2:82021200-82021219 MS.gene75021:intron 40.0%
GGAAAAGATGTCTTTATGGG+TGG + chr1.2:82020881-82020900 MS.gene75021:intron 40.0%
GGAACGGAAACTTCTATTGA+AGG + chr1.2:82019359-82019378 MS.gene75021:CDS 40.0%
GGTGAGGAAGTAATTTCAGT+TGG + chr1.2:82020240-82020259 MS.gene75021:intron 40.0%
GTTGGATCAACAAGTTTGAG+AGG + chr1.2:82020278-82020297 MS.gene75021:intron 40.0%
GTTTCGGCAAAAAACCTTAC+CGG + chr1.2:82021778-82021797 MS.gene75021:intron 40.0%
TAATAAGGCTGCTTCTGCTT+CGG + chr1.2:82018019-82018038 MS.gene75021:CDS 40.0%
TCAAAACCTCTCATGATACC+AGG - chr1.2:82018200-82018219 None:intergenic 40.0%
TCCATGATTCGTAACCCATT+TGG + chr1.2:82020444-82020463 MS.gene75021:intron 40.0%
TCCTGCAATTCCTCTAAGTT+TGG - chr1.2:82018255-82018274 None:intergenic 40.0%
TGAAAATGTTCGGTTTCGGT+TGG + chr1.2:82018055-82018074 MS.gene75021:CDS 40.0%
TGAGCTTGAAGATGAAGTTG+TGG + chr1.2:82021150-82021169 MS.gene75021:intron 40.0%
TGTGATTAACCCATCAGGAA+GGG + chr1.2:82019338-82019357 MS.gene75021:CDS 40.0%
TTATGACACATCACCCAAGT+CGG - chr1.2:82020402-82020421 None:intergenic 40.0%
TTGGAATATAAGAGGTCCGT+TGG + chr1.2:82019735-82019754 MS.gene75021:intron 40.0%
TTGTTGGGTATGAAGCAAGA+GGG + chr1.2:82020471-82020490 MS.gene75021:intron 40.0%
TTTGCTCTCTTTCTTGAACC+TGG - chr1.2:82018098-82018117 None:intergenic 40.0%
TTTGTTGGGTATGAAGCAAG+AGG + chr1.2:82020470-82020489 MS.gene75021:intron 40.0%
! ACAAAACGGACTCGATTATG+CGG - chr1.2:82019826-82019845 None:intergenic 40.0%
! AGGACTGAATATTTGGAGTG+AGG - chr1.2:82022076-82022095 None:intergenic 40.0%
! TCTGGTTTCCTCATAAACTC+AGG + chr1.2:82022444-82022463 MS.gene75021:intron 40.0%
! TTTTTATTCTCCTCTGCCCT+AGG - chr1.2:82020790-82020809 None:intergenic 40.0%
!! AATGGGTTACGAATCATGGA+TGG - chr1.2:82020444-82020463 None:intergenic 40.0%
!! ACCAAATGGGTTACGAATCA+TGG - chr1.2:82020448-82020467 None:intergenic 40.0%
!! ACCTTACAAACTGGTCTTGT+CGG - chr1.2:82022014-82022033 None:intergenic 40.0%
!! CATATGAAATAGGTGTTGGG+AGG + chr1.2:82020307-82020326 MS.gene75021:intron 40.0%
!! CTTCCAGCTTTGTTCTTCAT+TGG - chr1.2:82020909-82020928 None:intergenic 40.0%
!! GGTATCATGAGAGGTTTTGA+AGG + chr1.2:82018200-82018219 MS.gene75021:CDS 40.0%
!! GTTCTGGATCCAGGTTTTTA+GGG - chr1.2:82021927-82021946 None:intergenic 40.0%
!!! AGTTGTGGTTTTGGAATGAG+AGG + chr1.2:82018155-82018174 MS.gene75021:CDS 40.0%
!!! ATCATGAGAGGTTTTGAAGG+TGG + chr1.2:82018203-82018222 MS.gene75021:CDS 40.0%
!!! GCAAGATTTTTGGCAACTGA+TGG - chr1.2:82022805-82022824 None:intergenic 40.0%
AAATACGCTGTTACCAGAGC+AGG - chr1.2:82021949-82021968 None:intergenic 45.0%
AAGAAAAGAGTCGGTCGGTT+TGG + chr1.2:82020661-82020680 MS.gene75021:intron 45.0%
AAGAGGGCTTAGGTTTGAGA+GGG + chr1.2:82019982-82020001 MS.gene75021:intron 45.0%
AAGGAGAAACTTGAGTCTGC+TGG + chr1.2:82022736-82022755 MS.gene75021:CDS 45.0%
AAGGCTTCCCAAATAGAGCT+TGG - chr1.2:82022046-82022065 None:intergenic 45.0%
AAGTTTCTCCTTCGCTGATG+TGG - chr1.2:82022728-82022747 None:intergenic 45.0%
AATGCTCCAAAACCCGACTT+GGG + chr1.2:82020386-82020405 MS.gene75021:intron 45.0%
ACCGACAAGACCAGTTTGTA+AGG + chr1.2:82022010-82022029 MS.gene75021:intron 45.0%
ACCTGGTAACCTAACAGAAG+TGG + chr1.2:82020850-82020869 MS.gene75021:intron 45.0%
ACTGGGAGTCAAACTGTCAA+AGG + chr1.2:82021405-82021424 MS.gene75021:intron 45.0%
ACTTCTGTTAGGTTACCAGG+TGG - chr1.2:82020851-82020870 None:intergenic 45.0%
AGAGCAAAGAGAAAGGGAAG+AGG + chr1.2:82018110-82018129 MS.gene75021:CDS 45.0%
AGATTGAAGCTACCCTTGGA+CGG + chr1.2:82020593-82020612 MS.gene75021:intron 45.0%
AGGCTTCCCAAATAGAGCTT+GGG - chr1.2:82022045-82022064 None:intergenic 45.0%
AGTATGCCTATTACAGGAGC+CGG + chr1.2:82018832-82018851 MS.gene75021:intron 45.0%
ATACGCTACCAAGTGGGAAA+AGG + chr1.2:82022375-82022394 MS.gene75021:intron 45.0%
ATCCATTGTGACGAAAAGCG+TGG - chr1.2:82022579-82022598 None:intergenic 45.0%
ATTCAGTCCTGAGTGTGTGA+GGG + chr1.2:82022086-82022105 MS.gene75021:intron 45.0%
ATTGCGCAAAAGCTCCCATT+TGG - chr1.2:82018504-82018523 None:intergenic 45.0%
CAAAAATCTCGATCTGGACC+TGG + chr1.2:82018179-82018198 MS.gene75021:CDS 45.0%
CAACACAAAGTTTGAGAGGC+GGG + chr1.2:82021353-82021372 MS.gene75021:intron 45.0%
CACATCATTGTTGAATGCGG+AGG + chr1.2:82020939-82020958 MS.gene75021:intron 45.0%
CATCAATGCATGAGCCTATG+CGG - chr1.2:82021255-82021274 None:intergenic 45.0%
CCCAAACTTAGAGGAATTGC+AGG + chr1.2:82018251-82018270 MS.gene75021:CDS 45.0%
CCTCCTGTATGGTTCAGTTT+CGG + chr1.2:82021762-82021781 MS.gene75021:intron 45.0%
CGAATCTCGTATAGTAGCCA+AGG + chr1.2:82021060-82021079 MS.gene75021:intron 45.0%
CGGTTTCGGTTGGACAATTT+GGG + chr1.2:82018065-82018084 MS.gene75021:CDS 45.0%
CTCTTTCTTGAACCTGGTTG+TGG - chr1.2:82018092-82018111 None:intergenic 45.0%
CTGGGAGTCAAACTGTCAAA+GGG + chr1.2:82021406-82021425 MS.gene75021:intron 45.0%
CTGGTAGACATAGAAGATGC+TGG + chr1.2:82019267-82019286 MS.gene75021:CDS 45.0%
CTTCTCTACTCCCTATACCA+AGG - chr1.2:82020042-82020061 None:intergenic 45.0%
CTTGATCACTCCCTAACAGT+AGG - chr1.2:82018724-82018743 None:intergenic 45.0%
GAGTGAAGAAAAGAGTCGGT+CGG + chr1.2:82020656-82020675 MS.gene75021:intron 45.0%
GATTCCTGGCCGTAAGAAAT+GGG + chr1.2:82022774-82022793 MS.gene75021:CDS 45.0%
GCAACACAAAGTTTGAGAGG+CGG + chr1.2:82021352-82021371 MS.gene75021:intron 45.0%
GCTTATAGGAAGCCATCTTC+CGG - chr1.2:82021800-82021819 None:intergenic 45.0%
GGAGTGAAATGACTATGGCA+TGG + chr1.2:82020747-82020766 MS.gene75021:intron 45.0%
GTCTTGCTGCAGCTAGAATA+AGG - chr1.2:82021483-82021502 None:intergenic 45.0%
GTGTGATTAACCCATCAGGA+AGG + chr1.2:82019337-82019356 MS.gene75021:CDS 45.0%
GTGTGCTCTTGTACAAAGGA+TGG + chr1.2:82020971-82020990 MS.gene75021:intron 45.0%
TATGACACATCACCCAAGTC+GGG - chr1.2:82020401-82020420 None:intergenic 45.0%
TATTCAGTCCTGAGTGTGTG+AGG + chr1.2:82022085-82022104 MS.gene75021:intron 45.0%
TCCACTTCTGTTAGGTTACC+AGG - chr1.2:82020854-82020873 None:intergenic 45.0%
TCGGTTTCGGTTGGACAATT+TGG + chr1.2:82018064-82018083 MS.gene75021:CDS 45.0%
TGACAACTTCAACCTTTGGG+TGG + chr1.2:82021124-82021143 MS.gene75021:intron 45.0%
TGATTCCTGGCCGTAAGAAA+TGG + chr1.2:82022773-82022792 MS.gene75021:CDS 45.0%
TGGATTTCAAGAAGGGGAAG+AGG + chr1.2:82019287-82019306 MS.gene75021:CDS 45.0%
TGTTCCATCACTGTGATTCC+TGG + chr1.2:82022760-82022779 MS.gene75021:CDS 45.0%
TTAACCCATCAGGAAGGGAA+CGG + chr1.2:82019343-82019362 MS.gene75021:CDS 45.0%
TTAACCCATTTCTTACGGCC+AGG - chr1.2:82022781-82022800 None:intergenic 45.0%
TTGCCGAAACTGAACCATAC+AGG - chr1.2:82021768-82021787 None:intergenic 45.0%
TTGGGCAATCGTCGATAAAG+TGG - chr1.2:82018236-82018255 None:intergenic 45.0%
TTGGTATCAAGGCTCCATCA+AGG + chr1.2:82020148-82020167 MS.gene75021:intron 45.0%
! AAAGGCACACATGGATGTCA+TGG + chr1.2:82020215-82020234 MS.gene75021:intron 45.0%
! AACCGAACATTTTCACCTGC+TGG - chr1.2:82018050-82018069 None:intergenic 45.0%
! CTTCTTGGCGAAGTATTCGT+CGG - chr1.2:82022833-82022852 None:intergenic 45.0%
! GCATGGAAGTGGAAGTTGAT+CGG + chr1.2:82020764-82020783 MS.gene75021:intron 45.0%
! GCTTCCTATAAGCCTTGTGA+AGG + chr1.2:82021807-82021826 MS.gene75021:intron 45.0%
! TAGCTGCAGCAAGACTGTTT+TGG + chr1.2:82021488-82021507 MS.gene75021:intron 45.0%
! TAGGCTCATGCATTGATGAG+AGG + chr1.2:82021257-82021276 MS.gene75021:intron 45.0%
! TTCCACGCTTTTCGTCACAA+TGG + chr1.2:82022574-82022593 MS.gene75021:intron 45.0%
! TTTGGAGTGAGGACAAACGA+AGG - chr1.2:82022065-82022084 None:intergenic 45.0%
!! GTACAAGAGCACACTTTTGG+TGG - chr1.2:82020965-82020984 None:intergenic 45.0%
!! GTTGTTCGATGGTGGACATT+AGG - chr1.2:82021041-82021060 None:intergenic 45.0%
!! GTTTGTTGTGCTCTGGTTTC+AGG + chr1.2:82022648-82022667 MS.gene75021:intron 45.0%
!!! GGTTCTGGATCCAGGTTTTT+AGG - chr1.2:82021928-82021947 None:intergenic 45.0%
!!! GTGCTCTGGTTTCAGGTTTT+GGG + chr1.2:82022655-82022674 MS.gene75021:intron 45.0%
!!! TGGATCCAGGTTTTTAGGGT+TGG - chr1.2:82021923-82021942 None:intergenic 45.0%
!!! TGGTTTCAGGTTTTGGGTGA+AGG + chr1.2:82022661-82022680 MS.gene75021:intron 45.0%
!!! TGTGCTCTGGTTTCAGGTTT+TGG + chr1.2:82022654-82022673 MS.gene75021:intron 45.0%
!!! TTTTATAAAAAAACATAATA+AGG + chr1.2:82019207-82019226 MS.gene75021:intron 5.0%
!!! TTTTATAAAAATAAAAGAAA+AGG - chr1.2:82019197-82019216 None:intergenic 5.0%
AGGGCTTGTGCATGAATGCA+AGG + chr1.2:82020490-82020509 MS.gene75021:intron 50.0%
AGTTTCCGTTCCCTTCCTGA+TGG - chr1.2:82019351-82019370 None:intergenic 50.0%
ATTACCGAACAGGGGACAGT+AGG + chr1.2:82020812-82020831 MS.gene75021:intron 50.0%
CAAGGCTCCATCAAGGAGTT+GGG + chr1.2:82020155-82020174 MS.gene75021:intron 50.0%
CAATCCTACTGTCCCCTGTT+CGG - chr1.2:82020819-82020838 None:intergenic 50.0%
CAATGCTCCAAAACCCGACT+TGG + chr1.2:82020385-82020404 MS.gene75021:intron 50.0%
CATGGATGTCATGGATGGTG+AGG + chr1.2:82020224-82020243 MS.gene75021:intron 50.0%
CCGAAACTGAACCATACAGG+AGG - chr1.2:82021765-82021784 None:intergenic 50.0%
CGACGATTGCCCAAACTTAG+AGG + chr1.2:82018242-82018261 MS.gene75021:CDS 50.0%
CGAGATTCGTTGTTCGATGG+TGG - chr1.2:82021049-82021068 None:intergenic 50.0%
CTACCAAGTGGGAAAAGGCA+TGG + chr1.2:82022380-82022399 MS.gene75021:intron 50.0%
CTCCTTCGCTGATGTGGAAA+AGG - chr1.2:82022722-82022741 None:intergenic 50.0%
GAAGAGGGCTTAGGTTTGAG+AGG + chr1.2:82019981-82020000 MS.gene75021:intron 50.0%
GACAATTTGGGTCCACAACC+AGG + chr1.2:82018077-82018096 MS.gene75021:CDS 50.0%
GATTGAAGCTACCCTTGGAC+GGG + chr1.2:82020594-82020613 MS.gene75021:intron 50.0%
GCACACATGGATGTCATGGA+TGG + chr1.2:82020219-82020238 MS.gene75021:intron 50.0%
GCAGGCGTCAAAGAGTTCTT+TGG + chr1.2:82021378-82021397 MS.gene75021:intron 50.0%
GCATATCCGGCTCCTGTAAT+AGG - chr1.2:82018841-82018860 None:intergenic 50.0%
GGCAAGATTGAAGCTACCCT+TGG + chr1.2:82020589-82020608 MS.gene75021:intron 50.0%
GGCCAACTGAAGACTCATCA+GGG - chr1.2:82021704-82021723 None:intergenic 50.0%
GGTTACGAATCATGGATGGC+TGG - chr1.2:82020440-82020459 None:intergenic 50.0%
GTCATCTGTGTAGCCATGGA+AGG + chr1.2:82020343-82020362 MS.gene75021:intron 50.0%
GTTTCCGTTCCCTTCCTGAT+GGG - chr1.2:82019350-82019369 None:intergenic 50.0%
TAGGAAGCCATCTTCCGGTA+AGG - chr1.2:82021795-82021814 None:intergenic 50.0%
TCAAGCTCAATGCCACCCAA+AGG - chr1.2:82021139-82021158 None:intergenic 50.0%
TCAAGGCTCCATCAAGGAGT+TGG + chr1.2:82020154-82020173 MS.gene75021:intron 50.0%
TCCAATAGTGACCCGTCCAA+GGG - chr1.2:82020608-82020627 None:intergenic 50.0%
TCTGGACCTGGTATCATGAG+AGG + chr1.2:82018191-82018210 MS.gene75021:CDS 50.0%
TGCTCTTTGAGCCTCCTGTA+TGG + chr1.2:82021751-82021770 MS.gene75021:intron 50.0%
TGGGGAAGATGCATCTGTGT+TGG + chr1.2:82020260-82020279 MS.gene75021:intron 50.0%
TTAGTATAGTCGGGGGTCCT+TGG + chr1.2:82020022-82020041 MS.gene75021:intron 50.0%
TTCAAAGAGGCTGACCGCAT+AGG + chr1.2:82021238-82021257 MS.gene75021:intron 50.0%
TTCAGTCCTGAGTGTGTGAG+GGG + chr1.2:82022087-82022106 MS.gene75021:intron 50.0%
! AAGTGGAAGTTGATCGGCCT+AGG + chr1.2:82020770-82020789 MS.gene75021:intron 50.0%
! ACATCACCCAAGTCGGGTTT+TGG - chr1.2:82020395-82020414 None:intergenic 50.0%
! AGTGGAAGTTGATCGGCCTA+GGG + chr1.2:82020771-82020790 MS.gene75021:intron 50.0%
! CAAGGAGCGAGTTGTGGTTT+TGG + chr1.2:82018146-82018165 MS.gene75021:CDS 50.0%
! GCTTGTAGTTTGTGGGAGCT+AGG + chr1.2:82021597-82021616 MS.gene75021:intron 50.0%
! GTCGGCACGTGCAAGATTTT+TGG - chr1.2:82022815-82022834 None:intergenic 50.0%
! TGCCTTTTCCACATCAGCGA+AGG + chr1.2:82022717-82022736 MS.gene75021:CDS 50.0%
!! CTGGTCTTGTCGGTTCAGTT+AGG - chr1.2:82022004-82022023 None:intergenic 50.0%
!! TCTAGGGTTAGCCTTGACGA+CGG + chr1.2:82021897-82021916 MS.gene75021:intron 50.0%
AAGTTTGAGAGGCGGGATGC+AGG + chr1.2:82021360-82021379 MS.gene75021:intron 55.0%
ACAACTCGCTCCTTGTCCTG+CGG - chr1.2:82018141-82018160 None:intergenic 55.0%
ACCCTTGGACGGGTCACTAT+TGG + chr1.2:82020604-82020623 MS.gene75021:intron 55.0%
ACGGCCAGGAATCACAGTGA+TGG - chr1.2:82022767-82022786 None:intergenic 55.0%
AGCAGCTGCTTCTCGCTTCT+TGG - chr1.2:82022848-82022867 None:intergenic 55.0%
AGTCGGGGGTCCTTGGTATA+GGG + chr1.2:82020029-82020048 MS.gene75021:intron 55.0%
CAGGGGACAGTAGGATTGCA+AGG + chr1.2:82020821-82020840 MS.gene75021:intron 55.0%
CTCCAATAGTGACCCGTCCA+AGG - chr1.2:82020609-82020628 None:intergenic 55.0%
CTTGGACGGGTCACTATTGG+AGG + chr1.2:82020607-82020626 MS.gene75021:intron 55.0%
GACGGCCAACCCTAAAAACC+TGG + chr1.2:82021915-82021934 MS.gene75021:intron 55.0%
GCTGTTACCAGAGCAGGTTC+TGG - chr1.2:82021943-82021962 None:intergenic 55.0%
GGATTGCAAGGTCAACCACC+TGG + chr1.2:82020833-82020852 MS.gene75021:intron 55.0%
GGCCCTGATGAGTCTTCAGT+TGG + chr1.2:82021699-82021718 MS.gene75021:intron 55.0%
GGGCCAACTGAAGACTCATC+AGG - chr1.2:82021705-82021724 None:intergenic 55.0%
TAGTCGGGGGTCCTTGGTAT+AGG + chr1.2:82020028-82020047 MS.gene75021:intron 55.0%
TCTGCTTCGGTGAAACCAGC+AGG + chr1.2:82018032-82018051 MS.gene75021:CDS 55.0%
! AGTGGGAAAAGGCATGGTGG+TGG + chr1.2:82022386-82022405 MS.gene75021:intron 55.0%
! CCAAGTGGGAAAAGGCATGG+TGG + chr1.2:82022383-82022402 MS.gene75021:intron 55.0%
! CCACCATGCCTTTTCCCACT+TGG - chr1.2:82022386-82022405 None:intergenic 55.0%
! GGTGTCTCTGGAGACACTGA+CGG + chr1.2:82019308-82019327 MS.gene75021:CDS 55.0%
!! AAGGGAAGAGGTATTGCCGC+AGG + chr1.2:82018122-82018141 MS.gene75021:CDS 55.0%
!! AGAAGGGGAAGAGGTGTCTC+TGG + chr1.2:82019296-82019315 MS.gene75021:CDS 55.0%
!! AGAGGTATTGCCGCAGGACA+AGG + chr1.2:82018128-82018147 MS.gene75021:CDS 55.0%
!! TTTAGGGTTGGCCGTCGTCA+AGG - chr1.2:82021911-82021930 None:intergenic 55.0%
ACACCTCCCCTCACACACTC+AGG - chr1.2:82022096-82022115 None:intergenic 60.0%
AGTCCTGAGTGTGTGAGGGG+AGG + chr1.2:82022090-82022109 MS.gene75021:intron 60.0%
AGTTGATCGGCCTAGGGCAG+AGG + chr1.2:82020777-82020796 MS.gene75021:intron 60.0%
CCTGGATCCAGAACCTGCTC+TGG + chr1.2:82021933-82021952 MS.gene75021:intron 60.0%
GCAGGACAAGGAGCGAGTTG+TGG + chr1.2:82018140-82018159 MS.gene75021:CDS 60.0%
!! CCAGAGCAGGTTCTGGATCC+AGG - chr1.2:82021936-82021955 None:intergenic 60.0%
CATGCTCGGCAACGGCAGTG+CGG + chr1.2:82021837-82021856 MS.gene75021:intron 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 82017996 82022888 82017996 ID=MS.gene75021
chr1.2 mRNA 82017996 82022888 82017996 ID=MS.gene75021.t1;Parent=MS.gene75021
chr1.2 exon 82017996 82018275 82017996 ID=MS.gene75021.t1.exon1;Parent=MS.gene75021.t1
chr1.2 CDS 82017996 82018275 82017996 ID=cds.MS.gene75021.t1;Parent=MS.gene75021.t1
chr1.2 exon 82019229 82019380 82019229 ID=MS.gene75021.t1.exon2;Parent=MS.gene75021.t1
chr1.2 CDS 82019229 82019380 82019229 ID=cds.MS.gene75021.t1;Parent=MS.gene75021.t1
chr1.2 exon 82022670 82022888 82022670 ID=MS.gene75021.t1.exon3;Parent=MS.gene75021.t1
chr1.2 CDS 82022670 82022888 82022670 ID=cds.MS.gene75021.t1;Parent=MS.gene75021.t1
Gene Sequence

>MS.gene75021

ATGAAACCTCGTGTTTTTGTTGTTAATAAGGCTGCTTCTGCTTCGGTGAAACCAGCAGGTGAAAATGTTCGGTTTCGGTTGGACAATTTGGGTCCACAACCAGGTTCAAGAAAGAGAGCAAAGAGAAAGGGAAGAGGTATTGCCGCAGGACAAGGAGCGAGTTGTGGTTTTGGAATGAGAGGTCAAAAATCTCGATCTGGACCTGGTATCATGAGAGGTTTTGAAGGTGGTCAGATGCCACTTTATCGACGATTGCCCAAACTTAGAGGAATTGCAGGAGGTATCTCTTCTTACACAACACTTGGGAATTTACCTATTGTTTTATTGTTGAAATTTGTTGTTTACGAATTTTGAAAATAATGTTTTCAACTATGGTGGTTATGATTGATTGACATTGTAATTCAATGATGGTATATACGAATTAAATTCTTACATAATACGAAGTGATGTTCAAACTTGTGTATTATACATTTTGTTAATAAGTTAATTTTTAGTCTATATACTACCAAATGGGAGCTTTTGCGCAATTGTTAGAGATGCAATTTGAGTTGAAAGTCAGATATTCATGAAATTTGCAGTATCTTAGAAATACAAGATTGAATATAATTTGCCCGCTAATAGGTTGCCCTTTTTTTACGATGTTTTGTTAAATTGTCCGTAGCATCATAATGCTTCACATGGAGTTTAAATGGATTTTGTTGAATTATATTAGGATAATTTAGGATCCTACTGTTAGGGAGTGATCAAGAAAGATGCTACTTGTAGCATCATTAGTAGGAAAAAACAATGGTTAGATGAGAATTGTTGCGTGCCTACATCACATTTGAAAGTCATGAAGTATGCCTATTACAGGAGCCGGATATGCTGTTGTATATATCCCTAATATGTAGATTTTCAAAGAAATTATAGTAGATTCCCTTTATTGACATCTTGAAATGGTGATTATTGTCTGAAGAGAATCATGGCATTATGGATTATACCAAGCTTCCAATACCTAAATTTCTCTTCCTCAGTTCTTATTATGCTTGACATCTTTACTTATTCTATATTTTTTCCCCTTATTCTTCCATATCCTTCCATGATTTCATTTCAAAAGCAATTATTTTATGAAAGGTTTTTCTTTCATTCTTTGTCGTAGGATCTCTCTTAATTTATTTAGTATATGCATAAATCTCGCTTGGAATCATGTTTTAATGTTCCTTTTCTTTTATTTTTATAAAAAAACATAATAAGGTATGCATGCTGGATTGCCGAAATATGTCCACATCAATCTGGTAGACATAGAAGATGCTGGATTTCAAGAAGGGGAAGAGGTGTCTCTGGAGACACTGACGGAGAAACGTGTGATTAACCCATCAGGAAGGGAACGGAAACTTCTATTGAAGGTACACATTACTTGTTGGTTTATGGCTATCTAAGTTTTTTCCCTTAGTTGTTGTCTTACATGTTCATTTCTGTGATTGTTTTCATGATGTCTAGAGGTATTACGATGTTTCACTTTTAAAAACAAATGAGGATGGTTAATTTTCCTAGTACCCCATATATCAAGAAAGACTTCTGATATGAGGTCCCTTGTCTATCGTGAATAAAGTTACTTTCTTTAAAATTTTCATATTATGCCTTTAATCGGAGAATTTTGGTTGTGCTTAGACATATGTTGTTTGTTTATGATATGTATGTAAGTTCAAACGCAATATTTTGGTGGCTGTGTTTGTGTTTTGAATTTGAAACTGTAAAAGTTGGAATATAAGAGGTCCGTTGGTTGAAAGAGTTAAAGTTAGTTAATGGATGTTGGGATATTAGAGATGTTGAAACCGTGTTTCTCAACCGCATAATCGAGTCCGTTTTGTAAGGCTCAAAGAAATAATTACAATATAAATACAATCGATTTTATTCTTATTTATGCCTATAGTTAATCTAAAATAATCACAAAGATCCTAAACATATTTTCAACAAGAGAAATAAGGCATGTTGTCTATAAATAAGAAGAGGGCTTAGGTTTGAGAGGGAGAGATATCTTGTCATTTTAGTATAGTCGGGGGTCCTTGGTATAGGGAGTAGAGAAGATTGCAGACCTTTGAAGTTCTGTAGTTTTCCATACAAGGAAATTTTCCCTAAATGTACATTTAATTAAAATATCAATTTCTGTCTATTGGTATCAAGGCTCCATCAAGGAGTTGGGAGTATATCATTGAAGATTATGTGGCGTGAATAAGAATAAAGGCACACATGGATGTCATGGATGGTGAGGAAGTAATTTCAGTTGGGGAAGATGCATCTGTGTTGGATCAACAAGTTTGAGAGGTATTTTCATATGAAATAGGTGTTGGGAGGAGAAAGATTATAAGTCATCTGTGTAGCCATGGAAGGACAAGCTTTGTTTTTGTTTCAATGCTCCAAAACCCGACTTGGGTGATGTGTCATAATGTTATTAGGTGTTTCCAGCCATCCATGATTCGTAACCCATTTGGTATTTTGTTGGGTATGAAGCAAGAGGGCTTGTGCATGAATGCAAGGATCAATTTGACATACAGGTCAGGTTGTTGCATCTGCTACCAGATAGAATATTTAAAAGGGTTTTTCTTGAAAGGACGGCAAGATTGAAGCTACCCTTGGACGGGTCACTATTGGAGGAGATGAATTTGGAAGAAACTATAAATGAGTGAAGAAAAGAGTCGGTCGGTTTGGAAATGAGCAAAGAGAGAATTCAAGAATATAAAATGGAGAAGTAAGAAGAAAGGTGAAAGAAATGGAGTGAAATGACTATGGCATGGAAGTGGAAGTTGATCGGCCTAGGGCAGAGGAGAATAAAAAAGATTACCGAACAGGGGACAGTAGGATTGCAAGGTCAACCACCTGGTAACCTAACAGAAGTGGAATGAAAAGGAAAAGATGTCTTTATGGGTGGAACCAATGAAGAACAAAGCTGGAAGAAACATGTGTCACATCATTGTTGAATGCGGAGGCCACCAAAAGTGTGCTCTTGTACAAAGGATGGTAGACCATTACAAATTGTGAAACTCTGACCTACATGCATGAAGACCTAATGTCCACCATCGAACAACGAATCTCGTATAGTAGCCAAGGTGATATCAAAGGCAAAGATGAAGCCAAATATGTTTAGAATCTGACAACTTCAACCTTTGGGTGGCATTGAGCTTGAAGATGAAGTTGTGGGGAAACATCGTTCAAATTCTGACCTATGCTGTTGCTAAACATGAAGATGGATTGTTGGATTGTATTTCAAAGAGGCTGACCGCATAGGCTCATGCATTGATGAGAGGCAGATTAATGGACAAGACTTCCTTTATAAGAAGAGGTAGATACTGAACATTGCCAAGTATTATTCATGTAGAGCAACACAAAGTTTGAGAGGCGGGATGCAGGCGTCAAAGAGTTCTTTGGCATGACTGGGAGTCAAACTGTCAAAGGGACGAACTACTACATCAAGCTAAAAGGGACTCAGCTTTTCAACAAATTGATACCTTATTCTAGCTGCAGCAAGACTGTTTTGGTTTATTAATCTTTTTCACTTTAAGGATAAGGTGAAACTTGAGAGGAGAGTATTGATACACCTGTTAGTTGAAGGAGTTTGAGTTAAGCTTGTAGTTTGTGGGAGCTAGGATTATTAGAGAAATAATGTGTGCTGTCTATATATAAGAAGAGGCTGAAGGAGAGATATCTTGTATTTTTAATAGAGCTGGGCCCTGATGAGTCTTCAGTTGGCCCTCTTCCAACCAACTTAGAAATAGAATTGCTCTTTGAGCCTCCTGTATGGTTCAGTTTCGGCAAAAAACCTTACCGGAAGATGGCTTCCTATAAGCCTTGTGAAGGAAAATAACATGCTCGGCAACGGCAGTGCGGTCACTATTTCGAAATAGACAGCAAACATGCATAAACTTCTAGGGTTAGCCTTGACGACGGCCAACCCTAAAAACCTGGATCCAGAACCTGCTCTGGTAACAGCGTATTTAGAGTATACTCTAATATCATTTAGAATTTTGGCCTAACTGAACCGACAAGACCAGTTTGTAAGGTAAAGAATGCCCAAGCTCTATTTGGGAAGCCTTCGTTTGTCCTCACTCCAAATATTCAGTCCTGAGTGTGTGAGGGGAGGTGTTGAGATTTTACACTAACTAGAGAGTGAGTGTTAAAAGATAAGAAATTAATCATATGAGATGCTTCAAGATACTGTAACATACACAATATTACAACTTTACCAATACTTTTCATATCTACGAATACTAGTAATTCATTTCTAAAGTGATATTTAGCGGTTGAAAGAAACTGTAGCATGTTCTGGAAAATTACTGCACTACTTCTAGCATCATGAATTTTGTTGGTTCAGTTTTATCGTATTCGTTATCTGTAAACATATAATACGCTACCAAGTGGGAAAAGGCATGGTGGTGGTTGTTGCTACAATTGCCATTATTTGAAAGAGCTCTTCTGGTTTCCTCATAAACTCAGGAAAATATTTGCAAAAAACATAGTTTCAATTTCAAACAACTTATACAGGCTAGCATTTAGCAAGTTGTATACTTCTAATTAGTCATGCATTGGGCACTGAACACAAAGTTCCACGCTTTTCGTCACAATGGATCAAGTACACATACACAATATATTTTTAAAAAGGAAATATAAAAATAATAGTTTGTTGTGCTCTGGTTTCAGGTTTTGGGTGAAGGAGAACTAAGCAAGAAGTTGACAATAAAAGCTGGTGCCTTTTCCACATCAGCGAAGGAGAAACTTGAGTCTGCTGGTTGTTCCATCACTGTGATTCCTGGCCGTAAGAAATGGGTTAAGCCATCAGTTGCCAAAAATCTTGCACGTGCCGACGAATACTTCGCCAAGAAGCGAGAAGCAGCTGCTTCTGAACCAGATTCTGTTTAA

Protein sequence

>MS.gene75021.t1

MKPRVFVVNKAASASVKPAGENVRFRLDNLGPQPGSRKRAKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRLPKLRGIAGGMHAGLPKYVHINLVDIEDAGFQEGEEVSLETLTEKRVINPSGRERKLLLKVLGEGELSKKLTIKAGAFSTSAKEKLESAGCSITVIPGRKKWVKPSVAKNLARADEYFAKKREAAASEPDSV