Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59730.t1 | XP_003614593.1 | 98.4 | 440 | 7 | 0 | 1 | 440 | 103 | 542 | 7.00E-244 | 852.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59730.t1 | Q9FV81 | 81.4 | 440 | 82 | 0 | 1 | 440 | 109 | 548 | 1.4e-213 | 743.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59730.t1 | G7K0I2 | 98.4 | 440 | 7 | 0 | 1 | 440 | 103 | 542 | 5.0e-244 | 852.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene59730 | 0.824939 | 6.15E-54 | -1.69E-46 |
| MS.gene049153 | MS.gene59730 | 0.820046 | 8.44E-53 | -1.69E-46 |
| MS.gene049195 | MS.gene59730 | 0.82172 | 3.48E-53 | -1.69E-46 |
| MS.gene049260 | MS.gene59730 | 0.835138 | 2.00E-56 | -1.69E-46 |
| MS.gene049284 | MS.gene59730 | 0.81847 | 1.93E-52 | -1.69E-46 |
| MS.gene049297 | MS.gene59730 | 0.851599 | 7.99E-61 | -1.69E-46 |
| MS.gene04933 | MS.gene59730 | 0.825043 | 5.81E-54 | -1.69E-46 |
| MS.gene049346 | MS.gene59730 | 0.85791 | 1.18E-62 | -1.69E-46 |
| MS.gene049351 | MS.gene59730 | 0.870328 | 1.59E-66 | -1.69E-46 |
| MS.gene049356 | MS.gene59730 | 0.801358 | 9.35E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene59730 | 0.805497 | 1.30E-49 | -1.69E-46 |
| MS.gene049389 | MS.gene59730 | 0.850855 | 1.30E-60 | -1.69E-46 |
| MS.gene049491 | MS.gene59730 | 0.860013 | 2.78E-63 | -1.69E-46 |
| MS.gene049599 | MS.gene59730 | -0.811423 | 7.05E-51 | -1.69E-46 |
| MS.gene049661 | MS.gene59730 | 0.846371 | 2.27E-59 | -1.69E-46 |
| MS.gene049662 | MS.gene59730 | 0.847225 | 1.32E-59 | -1.69E-46 |
| MS.gene049681 | MS.gene59730 | 0.826454 | 2.69E-54 | -1.69E-46 |
| MS.gene049758 | MS.gene59730 | 0.916759 | 1.21E-85 | -1.69E-46 |
| MS.gene049910 | MS.gene59730 | 0.870932 | 1.00E-66 | -1.69E-46 |
| MS.gene049915 | MS.gene59730 | 0.810139 | 1.34E-50 | -1.69E-46 |
| MS.gene050076 | MS.gene59730 | 0.869147 | 3.85E-66 | -1.69E-46 |
| MS.gene050099 | MS.gene59730 | 0.87022 | 1.72E-66 | -1.69E-46 |
| MS.gene050128 | MS.gene59730 | 0.853309 | 2.60E-61 | -1.69E-46 |
| MS.gene050226 | MS.gene59730 | 0.827513 | 1.50E-54 | -1.69E-46 |
| MS.gene050227 | MS.gene59730 | 0.829103 | 6.21E-55 | -1.69E-46 |
| MS.gene050228 | MS.gene59730 | 0.822812 | 1.94E-53 | -1.69E-46 |
| MS.gene050231 | MS.gene59730 | 0.825082 | 5.69E-54 | -1.69E-46 |
| MS.gene050301 | MS.gene59730 | 0.928152 | 4.32E-92 | -1.69E-46 |
| MS.gene050319 | MS.gene59730 | -0.820404 | 6.98E-53 | -1.69E-46 |
| MS.gene050330 | MS.gene59730 | -0.8256 | 4.29E-54 | -1.69E-46 |
| MS.gene050397 | MS.gene59730 | 0.867283 | 1.53E-65 | -1.69E-46 |
| MS.gene050404 | MS.gene59730 | 0.819881 | 9.20E-53 | -1.69E-46 |
| MS.gene050406 | MS.gene59730 | 0.841561 | 4.41E-58 | -1.69E-46 |
| MS.gene050432 | MS.gene59730 | 0.82708 | 1.91E-54 | -1.69E-46 |
| MS.gene050464 | MS.gene59730 | 0.869112 | 3.95E-66 | -1.69E-46 |
| MS.gene050529 | MS.gene59730 | 0.876291 | 1.57E-68 | -1.69E-46 |
| MS.gene05053 | MS.gene59730 | 0.819771 | 9.75E-53 | -1.69E-46 |
| MS.gene050558 | MS.gene59730 | 0.856212 | 3.75E-62 | -1.69E-46 |
| MS.gene050623 | MS.gene59730 | -0.829742 | 4.34E-55 | -1.69E-46 |
| MS.gene050642 | MS.gene59730 | 0.846481 | 2.11E-59 | -1.69E-46 |
| MS.gene050650 | MS.gene59730 | 0.833377 | 5.52E-56 | -1.69E-46 |
| MS.gene050670 | MS.gene59730 | 0.865177 | 7.13E-65 | -1.69E-46 |
| MS.gene050812 | MS.gene59730 | 0.818509 | 1.89E-52 | -1.69E-46 |
| MS.gene05101 | MS.gene59730 | 0.890565 | 8.78E-74 | -1.69E-46 |
| MS.gene05105 | MS.gene59730 | 0.822929 | 1.82E-53 | -1.69E-46 |
| MS.gene05119 | MS.gene59730 | -0.824951 | 6.11E-54 | -1.69E-46 |
| MS.gene051387 | MS.gene59730 | 0.807558 | 4.77E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene59730 | 0.882542 | 9.55E-71 | -1.69E-46 |
| MS.gene051525 | MS.gene59730 | 0.832624 | 8.50E-56 | -1.69E-46 |
| MS.gene051582 | MS.gene59730 | 0.863168 | 3.02E-64 | -1.69E-46 |
| MS.gene051662 | MS.gene59730 | 0.850789 | 1.35E-60 | -1.69E-46 |
| MS.gene051663 | MS.gene59730 | 0.876105 | 1.82E-68 | -1.69E-46 |
| MS.gene051860 | MS.gene59730 | 0.895882 | 6.28E-76 | -1.69E-46 |
| MS.gene051877 | MS.gene59730 | 0.835675 | 1.46E-56 | -1.69E-46 |
| MS.gene051983 | MS.gene59730 | 0.853797 | 1.88E-61 | -1.69E-46 |
| MS.gene052011 | MS.gene59730 | -0.835212 | 1.91E-56 | -1.69E-46 |
| MS.gene052025 | MS.gene59730 | 0.807583 | 4.71E-50 | -1.69E-46 |
| MS.gene052077 | MS.gene59730 | 0.868603 | 5.77E-66 | -1.69E-46 |
| MS.gene052078 | MS.gene59730 | 0.892029 | 2.31E-74 | -1.69E-46 |
| MS.gene052178 | MS.gene59730 | 0.871657 | 5.78E-67 | -1.69E-46 |
| MS.gene052188 | MS.gene59730 | 0.895211 | 1.19E-75 | -1.69E-46 |
| MS.gene052207 | MS.gene59730 | 0.871949 | 4.63E-67 | -1.69E-46 |
| MS.gene052253 | MS.gene59730 | 0.875296 | 3.45E-68 | -1.69E-46 |
| MS.gene052255 | MS.gene59730 | 0.80455 | 2.05E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene59730 | 0.882958 | 6.73E-71 | -1.69E-46 |
| MS.gene052322 | MS.gene59730 | 0.807252 | 5.54E-50 | -1.69E-46 |
| MS.gene052326 | MS.gene59730 | 0.872118 | 4.06E-67 | -1.69E-46 |
| MS.gene052340 | MS.gene59730 | 0.894673 | 1.98E-75 | -1.69E-46 |
| MS.gene052344 | MS.gene59730 | -0.80153 | 8.62E-49 | -1.69E-46 |
| MS.gene052421 | MS.gene59730 | 0.800057 | 1.72E-48 | -1.69E-46 |
| MS.gene052485 | MS.gene59730 | 0.847624 | 1.03E-59 | -1.69E-46 |
| MS.gene052600 | MS.gene59730 | 0.81138 | 7.21E-51 | -1.69E-46 |
| MS.gene052767 | MS.gene59730 | 0.812456 | 4.20E-51 | -1.69E-46 |
| MS.gene053073 | MS.gene59730 | 0.823994 | 1.03E-53 | -1.69E-46 |
| MS.gene053103 | MS.gene59730 | 0.815046 | 1.13E-51 | -1.69E-46 |
| MS.gene05316 | MS.gene59730 | 0.822163 | 2.74E-53 | -1.69E-46 |
| MS.gene053209 | MS.gene59730 | 0.851464 | 8.73E-61 | -1.69E-46 |
| MS.gene053557 | MS.gene59730 | 0.872651 | 2.70E-67 | -1.69E-46 |
| MS.gene053559 | MS.gene59730 | 0.826104 | 3.26E-54 | -1.69E-46 |
| MS.gene053577 | MS.gene59730 | 0.810496 | 1.12E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene59730 | 0.961395 | 1.19E-119 | -1.69E-46 |
| MS.gene053907 | MS.gene59730 | 0.846012 | 2.84E-59 | -1.69E-46 |
| MS.gene053928 | MS.gene59730 | 0.847827 | 9.04E-60 | -1.69E-46 |
| MS.gene053971 | MS.gene59730 | 0.830049 | 3.66E-55 | -1.69E-46 |
| MS.gene054010 | MS.gene59730 | 0.838067 | 3.58E-57 | -1.69E-46 |
| MS.gene054011 | MS.gene59730 | 0.856111 | 4.01E-62 | -1.69E-46 |
| MS.gene054012 | MS.gene59730 | 0.842753 | 2.13E-58 | -1.69E-46 |
| MS.gene054013 | MS.gene59730 | 0.839959 | 1.16E-57 | -1.69E-46 |
| MS.gene054123 | MS.gene59730 | 0.87469 | 5.55E-68 | -1.69E-46 |
| MS.gene054183 | MS.gene59730 | 0.821821 | 3.29E-53 | -1.69E-46 |
| MS.gene054349 | MS.gene59730 | 0.843242 | 1.58E-58 | -1.69E-46 |
| MS.gene054376 | MS.gene59730 | 0.813565 | 2.40E-51 | -1.69E-46 |
| MS.gene054473 | MS.gene59730 | 0.883903 | 3.03E-71 | -1.69E-46 |
| MS.gene054542 | MS.gene59730 | 0.824759 | 6.78E-54 | -1.69E-46 |
| MS.gene05455 | MS.gene59730 | 0.867075 | 1.79E-65 | -1.69E-46 |
| MS.gene054618 | MS.gene59730 | 0.806607 | 7.58E-50 | -1.69E-46 |
| MS.gene054667 | MS.gene59730 | 0.808001 | 3.84E-50 | -1.69E-46 |
| MS.gene054719 | MS.gene59730 | 0.817908 | 2.58E-52 | -1.69E-46 |
| MS.gene054802 | MS.gene59730 | 0.812604 | 3.90E-51 | -1.69E-46 |
| MS.gene054803 | MS.gene59730 | 0.812987 | 3.21E-51 | -1.69E-46 |
| MS.gene054804 | MS.gene59730 | 0.812221 | 4.73E-51 | -1.69E-46 |
| MS.gene054918 | MS.gene59730 | 0.81564 | 8.34E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene59730 | 0.871501 | 6.51E-67 | -1.69E-46 |
| MS.gene054942 | MS.gene59730 | 0.853786 | 1.90E-61 | -1.69E-46 |
| MS.gene054955 | MS.gene59730 | 0.817365 | 3.42E-52 | -1.69E-46 |
| MS.gene054983 | MS.gene59730 | 0.866405 | 2.92E-65 | -1.69E-46 |
| MS.gene055116 | MS.gene59730 | 0.869481 | 3.00E-66 | -1.69E-46 |
| MS.gene055277 | MS.gene59730 | 0.896744 | 2.75E-76 | -1.69E-46 |
| MS.gene055390 | MS.gene59730 | 0.874273 | 7.68E-68 | -1.69E-46 |
| MS.gene055422 | MS.gene59730 | 0.935456 | 8.24E-97 | -1.69E-46 |
| MS.gene055428 | MS.gene59730 | 0.919493 | 4.20E-87 | -1.69E-46 |
| MS.gene05553 | MS.gene59730 | 0.862749 | 4.07E-64 | -1.69E-46 |
| MS.gene055604 | MS.gene59730 | 0.874395 | 6.99E-68 | -1.69E-46 |
| MS.gene055712 | MS.gene59730 | 0.867598 | 1.22E-65 | -1.69E-46 |
| MS.gene055859 | MS.gene59730 | 0.827266 | 1.72E-54 | -1.69E-46 |
| MS.gene05602 | MS.gene59730 | 0.802244 | 6.15E-49 | -1.69E-46 |
| MS.gene056069 | MS.gene59730 | -0.819201 | 1.32E-52 | -1.69E-46 |
| MS.gene056128 | MS.gene59730 | 0.817141 | 3.85E-52 | -1.69E-46 |
| MS.gene056191 | MS.gene59730 | 0.85899 | 5.64E-63 | -1.69E-46 |
| MS.gene056314 | MS.gene59730 | 0.839026 | 2.03E-57 | -1.69E-46 |
| MS.gene056407 | MS.gene59730 | 0.896218 | 4.56E-76 | -1.69E-46 |
| MS.gene056410 | MS.gene59730 | 0.839964 | 1.16E-57 | -1.69E-46 |
| MS.gene056451 | MS.gene59730 | 0.819535 | 1.10E-52 | -1.69E-46 |
| MS.gene056609 | MS.gene59730 | 0.82423 | 9.03E-54 | -1.69E-46 |
| MS.gene056612 | MS.gene59730 | 0.888864 | 4.04E-73 | -1.69E-46 |
| MS.gene056659 | MS.gene59730 | 0.838965 | 2.10E-57 | -1.69E-46 |
| MS.gene056719 | MS.gene59730 | 0.808103 | 3.65E-50 | -1.69E-46 |
| MS.gene056723 | MS.gene59730 | 0.805318 | 1.41E-49 | -1.69E-46 |
| MS.gene056796 | MS.gene59730 | 0.822478 | 2.32E-53 | -1.69E-46 |
| MS.gene056875 | MS.gene59730 | 0.833441 | 5.32E-56 | -1.69E-46 |
| MS.gene056899 | MS.gene59730 | -0.83967 | 1.38E-57 | -1.69E-46 |
| MS.gene056902 | MS.gene59730 | 0.827909 | 1.21E-54 | -1.69E-46 |
| MS.gene056931 | MS.gene59730 | 0.818 | 2.46E-52 | -1.69E-46 |
| MS.gene056933 | MS.gene59730 | 0.814866 | 1.24E-51 | -1.69E-46 |
| MS.gene056935 | MS.gene59730 | 0.801061 | 1.08E-48 | -1.69E-46 |
| MS.gene056979 | MS.gene59730 | 0.848739 | 5.06E-60 | -1.69E-46 |
| MS.gene05702 | MS.gene59730 | 0.890624 | 8.32E-74 | -1.69E-46 |
| MS.gene057121 | MS.gene59730 | 0.886337 | 3.73E-72 | -1.69E-46 |
| MS.gene057123 | MS.gene59730 | 0.847055 | 1.47E-59 | -1.69E-46 |
| MS.gene057146 | MS.gene59730 | 0.819104 | 1.38E-52 | -1.69E-46 |
| MS.gene057245 | MS.gene59730 | 0.88279 | 7.75E-71 | -1.69E-46 |
| MS.gene057295 | MS.gene59730 | 0.820107 | 8.17E-53 | -1.69E-46 |
| MS.gene05733 | MS.gene59730 | 0.863027 | 3.34E-64 | -1.69E-46 |
| MS.gene057439 | MS.gene59730 | 0.885086 | 1.10E-71 | -1.69E-46 |
| MS.gene057448 | MS.gene59730 | 0.857757 | 1.31E-62 | -1.69E-46 |
| MS.gene057449 | MS.gene59730 | 0.840638 | 7.71E-58 | -1.69E-46 |
| MS.gene057450 | MS.gene59730 | 0.866525 | 2.68E-65 | -1.69E-46 |
| MS.gene057469 | MS.gene59730 | 0.855163 | 7.59E-62 | -1.69E-46 |
| MS.gene057749 | MS.gene59730 | 0.856447 | 3.20E-62 | -1.69E-46 |
| MS.gene057754 | MS.gene59730 | 0.810111 | 1.36E-50 | -1.69E-46 |
| MS.gene057779 | MS.gene59730 | 0.809911 | 1.50E-50 | -1.69E-46 |
| MS.gene057796 | MS.gene59730 | 0.809235 | 2.09E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene59730 | 0.851793 | 7.04E-61 | -1.69E-46 |
| MS.gene057825 | MS.gene59730 | 0.809795 | 1.59E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene59730 | 0.916446 | 1.76E-85 | -1.69E-46 |
| MS.gene058007 | MS.gene59730 | 0.800713 | 1.27E-48 | -1.69E-46 |
| MS.gene058082 | MS.gene59730 | 0.848551 | 5.70E-60 | -1.69E-46 |
| MS.gene05811 | MS.gene59730 | 0.920725 | 8.89E-88 | -1.69E-46 |
| MS.gene058142 | MS.gene59730 | 0.882804 | 7.66E-71 | -1.69E-46 |
| MS.gene058233 | MS.gene59730 | 0.856505 | 3.08E-62 | -1.69E-46 |
| MS.gene058276 | MS.gene59730 | 0.847619 | 1.03E-59 | -1.69E-46 |
| MS.gene058293 | MS.gene59730 | 0.875941 | 2.07E-68 | -1.69E-46 |
| MS.gene058365 | MS.gene59730 | 0.843117 | 1.71E-58 | -1.69E-46 |
| MS.gene058660 | MS.gene59730 | 0.905187 | 5.59E-80 | -1.69E-46 |
| MS.gene058700 | MS.gene59730 | 0.800171 | 1.63E-48 | -1.69E-46 |
| MS.gene058710 | MS.gene59730 | 0.848889 | 4.60E-60 | -1.69E-46 |
| MS.gene058749 | MS.gene59730 | 0.851628 | 7.84E-61 | -1.69E-46 |
| MS.gene058787 | MS.gene59730 | 0.832435 | 9.47E-56 | -1.69E-46 |
| MS.gene058833 | MS.gene59730 | 0.809241 | 2.09E-50 | -1.69E-46 |
| MS.gene058845 | MS.gene59730 | 0.869926 | 2.15E-66 | -1.69E-46 |
| MS.gene05886 | MS.gene59730 | 0.869475 | 3.01E-66 | -1.69E-46 |
| MS.gene058928 | MS.gene59730 | 0.833531 | 5.05E-56 | -1.69E-46 |
| MS.gene058949 | MS.gene59730 | 0.815693 | 8.11E-52 | -1.69E-46 |
| MS.gene058993 | MS.gene59730 | 0.814465 | 1.52E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene59730 | 0.926297 | 5.69E-91 | -1.69E-46 |
| MS.gene059141 | MS.gene59730 | 0.808882 | 2.49E-50 | -1.69E-46 |
| MS.gene059228 | MS.gene59730 | 0.819089 | 1.39E-52 | -1.69E-46 |
| MS.gene059285 | MS.gene59730 | 0.845246 | 4.58E-59 | -1.69E-46 |
| MS.gene059294 | MS.gene59730 | 0.839284 | 1.74E-57 | -1.69E-46 |
| MS.gene059326 | MS.gene59730 | 0.824574 | 7.50E-54 | -1.69E-46 |
| MS.gene059342 | MS.gene59730 | 0.831956 | 1.24E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene59730 | 0.837746 | 4.33E-57 | -1.69E-46 |
| MS.gene059518 | MS.gene59730 | 0.900452 | 7.23E-78 | -1.69E-46 |
| MS.gene059597 | MS.gene59730 | 0.922143 | 1.44E-88 | -1.69E-46 |
| MS.gene05959 | MS.gene59730 | 0.84334 | 1.49E-58 | -1.69E-46 |
| MS.gene059676 | MS.gene59730 | 0.893784 | 4.55E-75 | -1.69E-46 |
| MS.gene059688 | MS.gene59730 | 0.881728 | 1.89E-70 | -1.69E-46 |
| MS.gene059692 | MS.gene59730 | 0.900391 | 7.68E-78 | -1.69E-46 |
| MS.gene059695 | MS.gene59730 | 0.900022 | 1.11E-77 | -1.69E-46 |
| MS.gene059708 | MS.gene59730 | 0.811134 | 8.15E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene59730 | 0.914704 | 1.40E-84 | -1.69E-46 |
| MS.gene059894 | MS.gene59730 | 0.902229 | 1.20E-78 | -1.69E-46 |
| MS.gene059899 | MS.gene59730 | 0.852126 | 5.66E-61 | -1.69E-46 |
| MS.gene059960 | MS.gene59730 | 0.805951 | 1.04E-49 | -1.69E-46 |
| MS.gene059974 | MS.gene59730 | 0.818723 | 1.69E-52 | -1.69E-46 |
| MS.gene060005 | MS.gene59730 | 0.829023 | 6.49E-55 | -1.69E-46 |
| MS.gene060107 | MS.gene59730 | 0.809719 | 1.65E-50 | -1.69E-46 |
| MS.gene060247 | MS.gene59730 | 0.800444 | 1.44E-48 | -1.69E-46 |
| MS.gene06037 | MS.gene59730 | 0.883791 | 3.33E-71 | -1.69E-46 |
| MS.gene060403 | MS.gene59730 | 0.837658 | 4.56E-57 | -1.69E-46 |
| MS.gene060407 | MS.gene59730 | 0.858731 | 6.74E-63 | -1.69E-46 |
| MS.gene060476 | MS.gene59730 | 0.840856 | 6.76E-58 | -1.69E-46 |
| MS.gene060495 | MS.gene59730 | 0.832705 | 8.11E-56 | -1.69E-46 |
| MS.gene060496 | MS.gene59730 | 0.801901 | 7.23E-49 | -1.69E-46 |
| MS.gene060559 | MS.gene59730 | 0.837831 | 4.12E-57 | -1.69E-46 |
| MS.gene06090 | MS.gene59730 | 0.837674 | 4.52E-57 | -1.69E-46 |
| MS.gene061049 | MS.gene59730 | 0.934141 | 6.39E-96 | -1.69E-46 |
| MS.gene061051 | MS.gene59730 | -0.848308 | 6.66E-60 | -1.69E-46 |
| MS.gene061071 | MS.gene59730 | 0.812545 | 4.02E-51 | -1.69E-46 |
| MS.gene061112 | MS.gene59730 | 0.83284 | 7.52E-56 | -1.69E-46 |
| MS.gene061154 | MS.gene59730 | 0.815879 | 7.37E-52 | -1.69E-46 |
| MS.gene061159 | MS.gene59730 | 0.831998 | 1.21E-55 | -1.69E-46 |
| MS.gene061265 | MS.gene59730 | 0.8361 | 1.14E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59730.t1 | MTR_5g055940 | 98.409 | 440 | 7 | 0 | 1 | 440 | 103 | 542 | 0.0 | 886 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59730.t1 | AT1G48520 | 81.364 | 440 | 82 | 0 | 1 | 440 | 109 | 548 | 0.0 | 776 |
| MS.gene59730.t1 | AT1G48520 | 81.432 | 377 | 70 | 0 | 1 | 377 | 109 | 485 | 0.0 | 671 |
| MS.gene59730.t1 | AT1G48520 | 81.408 | 355 | 66 | 0 | 1 | 355 | 109 | 463 | 0.0 | 639 |
Find 104 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGAGGTTGGTTAGGTATT+TGG | 0.118798 | 5.4:-44156149 | MS.gene59730:CDS |
| ATTGAGTTTGCTGTTAAATT+AGG | 0.201148 | 5.4:-44158180 | MS.gene59730:CDS |
| ACTGATGGTTCCATCTTTAA+TGG | 0.209889 | 5.4:+44151901 | None:intergenic |
| TGTAAGCTTTACGTCATTTA+TGG | 0.214602 | 5.4:+44151952 | None:intergenic |
| CAGAGGTTGGTTAGGTATTT+GGG | 0.234354 | 5.4:-44156148 | MS.gene59730:CDS |
| GATGTTCCGATTGCGAGTTC+TGG | 0.238658 | 5.4:-44158060 | MS.gene59730:CDS |
| CCCATTGGGCAGTCAAAGTT+TGG | 0.260516 | 5.4:-44156064 | MS.gene59730:CDS |
| CGGTATTGCTCGACCTGTTT+CGG | 0.283416 | 5.4:+44150501 | None:intergenic |
| TAGTACAGGAAACTCGATTC+TGG | 0.297778 | 5.4:-44155830 | MS.gene59730:CDS |
| TTTCACAGGTTGATCTAAAC+AGG | 0.303878 | 5.4:-44156252 | MS.gene59730:intron |
| GTTGATATTCCTTTGGAGTA+TGG | 0.319525 | 5.4:-44158027 | MS.gene59730:CDS |
| AAGTTGTTGCATACTGAAAA+TGG | 0.322289 | 5.4:-44157949 | MS.gene59730:CDS |
| ATCAACTCAGCCAACTCTTC+AGG | 0.348581 | 5.4:+44151929 | None:intergenic |
| TTTATCCTGATTTGCCTAAA+GGG | 0.349525 | 5.4:-44158101 | MS.gene59730:CDS |
| TTCCTTGACACTTCCACCCT+TGG | 0.364393 | 5.4:+44151313 | None:intergenic |
| TGGTATTCAAAATTCTTTAC+CGG | 0.373277 | 5.4:-44155584 | MS.gene59730:CDS |
| ATGTTCCGATTGCGAGTTCT+GGG | 0.375435 | 5.4:-44158059 | MS.gene59730:CDS |
| TCTTGATGTTGATATTCCTT+TGG | 0.376577 | 5.4:-44158034 | MS.gene59730:CDS |
| AGAAAAGAAGGACTTGGTTC+AGG | 0.386903 | 5.4:-44151285 | MS.gene59730:intron |
| CCAGTTTGTATGGGGTTACC+AGG | 0.393004 | 5.4:-44158231 | None:intergenic |
| CGTTTGATTCTAAGTTTGAT+AGG | 0.394421 | 5.4:-44158134 | MS.gene59730:CDS |
| TGCGAAATCTGATACCCTTT+AGG | 0.399560 | 5.4:+44158087 | None:intergenic |
| CAGAATTACAGAGGTTGGTT+AGG | 0.400205 | 5.4:-44156156 | MS.gene59730:CDS |
| TGATACCCTTTAGGCAAATC+AGG | 0.403892 | 5.4:+44158096 | None:intergenic |
| TGGGATTACTAGGGTTCATA+TGG | 0.413274 | 5.4:-44157986 | MS.gene59730:CDS |
| TTGATTGCTTCCATTAAAGA+TGG | 0.413858 | 5.4:-44151911 | MS.gene59730:CDS |
| GGTGGTGGGCATAAGAGGTT+TGG | 0.415987 | 5.4:-44158006 | MS.gene59730:CDS |
| CTTCCCGATCTTGCCACTGA+TGG | 0.416937 | 5.4:+44151886 | None:intergenic |
| AGTATGGTGGTGGGCATAAG+AGG | 0.418164 | 5.4:-44158011 | MS.gene59730:CDS |
| ATAAGAGGTTTGGGATTACT+AGG | 0.423820 | 5.4:-44157996 | MS.gene59730:CDS |
| ACTGATGGAAGGTCTGGTTC+TGG | 0.424146 | 5.4:+44155631 | None:intergenic |
| AGATATGAAAAGATGGGATT+AGG | 0.425555 | 5.4:-44155538 | MS.gene59730:CDS |
| TCAATACCATTTCTCATGTC+AGG | 0.427491 | 5.4:+44156196 | None:intergenic |
| ATAACCTTACTGTTTAAAAC+AGG | 0.429595 | 5.4:+44158201 | None:intergenic |
| GTGGTGGGCATAAGAGGTTT+GGG | 0.440851 | 5.4:-44158005 | MS.gene59730:CDS |
| TCTACTTAACAAGATTCTCT+TGG | 0.443250 | 5.4:-44150315 | MS.gene59730:CDS |
| GGAACCATCAGTGGCAAGAT+CGG | 0.455897 | 5.4:-44151890 | MS.gene59730:CDS |
| GTTCATATGGAAGAGGATGC+TGG | 0.459070 | 5.4:-44157973 | MS.gene59730:CDS |
| ACTTGCGCTTAATTGCGAAT+TGG | 0.466093 | 5.4:-44158157 | MS.gene59730:CDS |
| TGGATAATGAGTGACATTGC+TGG | 0.466407 | 5.4:-44151998 | MS.gene59730:CDS |
| CCATTGGGCAGTCAAAGTTT+GGG | 0.467411 | 5.4:-44156063 | MS.gene59730:CDS |
| ATGCAAAGCTAGTTGCCAAC+TGG | 0.470558 | 5.4:-44152018 | MS.gene59730:CDS |
| AGGATTACTGATGGAAGGTC+TGG | 0.472816 | 5.4:+44155625 | None:intergenic |
| CCAAACTTTGACTGCCCAAT+GGG | 0.474365 | 5.4:+44156064 | None:intergenic |
| ACGTAGAAGATATGAAAAGA+TGG | 0.477653 | 5.4:-44155545 | MS.gene59730:CDS |
| GATTGCAGATAATCCGAAAC+AGG | 0.478489 | 5.4:-44150514 | MS.gene59730:CDS |
| CTTTCGCAAGAATATGTAGA+TGG | 0.478868 | 5.4:-44155604 | MS.gene59730:CDS |
| TGCAGCAGAATTACAGAGGT+TGG | 0.481825 | 5.4:-44156161 | MS.gene59730:CDS |
| TCTGAGCCTGACATGAGAAA+TGG | 0.487908 | 5.4:-44156202 | MS.gene59730:CDS |
| TCTCCAAATGCAGGTAATGA+AGG | 0.490122 | 5.4:-44150363 | MS.gene59730:intron |
| GAACCATCAGTGGCAAGATC+GGG | 0.490650 | 5.4:-44151889 | MS.gene59730:CDS |
| ATTCCTTTGGAGTATGGTGG+TGG | 0.491117 | 5.4:-44158021 | MS.gene59730:CDS |
| TCAAGCAGATCAGATAGTAC+AGG | 0.494685 | 5.4:-44155844 | MS.gene59730:CDS |
| CAAGGAAATCATAGAAAAGA+AGG | 0.496302 | 5.4:-44151297 | MS.gene59730:CDS |
| CGTAGAAGATATGAAAAGAT+GGG | 0.500188 | 5.4:-44155544 | MS.gene59730:CDS |
| AGTACAGGAAACTCGATTCT+GGG | 0.507212 | 5.4:-44155829 | MS.gene59730:CDS |
| CAGGTTGATCTAAACAGGGC+AGG | 0.508766 | 5.4:-44156247 | MS.gene59730:CDS |
| AATGTATCAGTACGACCCAT+TGG | 0.509398 | 5.4:-44156079 | MS.gene59730:CDS |
| ATTCTGGGAAGAAGGCTCTC+AGG | 0.511392 | 5.4:-44155814 | MS.gene59730:intron |
| AGGTATTTGGGAGTGAGCAA+TGG | 0.519711 | 5.4:-44156136 | MS.gene59730:CDS |
| CCCAAACTTTGACTGCCCAA+TGG | 0.522022 | 5.4:+44156063 | None:intergenic |
| TTTGATGCTACTCTTGCAAA+GGG | 0.524915 | 5.4:-44152046 | MS.gene59730:CDS |
| CTATCTGATCTGCTTGACCT+TGG | 0.525882 | 5.4:+44155850 | None:intergenic |
| TGAAAATGGAAATTATTCTC+AGG | 0.527515 | 5.4:-44157935 | MS.gene59730:intron |
| ATGTATCAGTACGACCCATT+GGG | 0.527958 | 5.4:-44156078 | MS.gene59730:CDS |
| CAGGTAATGAAGGCATCTAA+AGG | 0.530365 | 5.4:-44150353 | MS.gene59730:CDS |
| GAAACTCGATTCTGGGAAGA+AGG | 0.530670 | 5.4:-44155822 | MS.gene59730:CDS |
| AGAATCTTGTTAAGTAGACC+TGG | 0.533378 | 5.4:+44150320 | None:intergenic |
| AGAAACCCAGAACTCGCAAT+CGG | 0.541427 | 5.4:+44158054 | None:intergenic |
| GCAGTCAAAGTTTGGGACAA+AGG | 0.544671 | 5.4:-44156056 | MS.gene59730:intron |
| TTCATATGGAAGAGGATGCT+GGG | 0.547037 | 5.4:-44157972 | MS.gene59730:CDS |
| TACTAGGGTTCATATGGAAG+AGG | 0.547980 | 5.4:-44157980 | MS.gene59730:CDS |
| TTCCTTTGGAGTATGGTGGT+GGG | 0.550417 | 5.4:-44158020 | MS.gene59730:CDS |
| AGGTTGATCTAAACAGGGCA+GGG | 0.554153 | 5.4:-44156246 | MS.gene59730:CDS |
| ACTATTTGAGCTGTTAGCCA+AGG | 0.556875 | 5.4:-44151330 | MS.gene59730:CDS |
| TCTTGCGAAAGGATTACTGA+TGG | 0.558499 | 5.4:+44155616 | None:intergenic |
| CATCTACATATTCTTGCGAA+AGG | 0.562299 | 5.4:+44155605 | None:intergenic |
| AAAGCTTACACCTGAAGAGT+TGG | 0.568134 | 5.4:-44151939 | MS.gene59730:CDS |
| AATCATAGAAAAGAAGGACT+TGG | 0.570914 | 5.4:-44151291 | MS.gene59730:CDS |
| TAAGAGGTTTGGGATTACTA+GGG | 0.574696 | 5.4:-44157995 | MS.gene59730:CDS |
| GATATTCCTTTGGAGTATGG+TGG | 0.580260 | 5.4:-44158024 | MS.gene59730:CDS |
| TTTGAGCTGTTAGCCAAGGG+TGG | 0.582248 | 5.4:-44151326 | MS.gene59730:CDS |
| GGAGGCAAAACTAAACTCCA+AGG | 0.590194 | 5.4:-44150477 | MS.gene59730:CDS |
| GCGAAAGGATTACTGATGGA+AGG | 0.592489 | 5.4:+44155620 | None:intergenic |
| AATGTCACTCATTATCCAGT+TGG | 0.593782 | 5.4:+44152003 | None:intergenic |
| AGCAATGGAAATATGCAAGA+AGG | 0.594104 | 5.4:-44156121 | MS.gene59730:CDS |
| GAATCTTGTTAAGTAGACCT+GGG | 0.597544 | 5.4:+44150321 | None:intergenic |
| AGCCAAGGGTGGAAGTGTCA+AGG | 0.597653 | 5.4:-44151315 | MS.gene59730:CDS |
| ATTAAAGATGGAACCATCAG+TGG | 0.598421 | 5.4:-44151899 | MS.gene59730:CDS |
| CTATTTGAGCTGTTAGCCAA+GGG | 0.599372 | 5.4:-44151329 | MS.gene59730:CDS |
| CAGTGGCAAGATCGGGAAGG+AGG | 0.617613 | 5.4:-44151882 | MS.gene59730:intron |
| AATGAAGGCATCTAAAGGCA+AGG | 0.623180 | 5.4:-44150348 | MS.gene59730:CDS |
| TCTAAAGGCAAGGCAAACCC+AGG | 0.631689 | 5.4:-44150338 | MS.gene59730:CDS |
| GGTTGATCTAAACAGGGCAG+GGG | 0.633434 | 5.4:-44156245 | MS.gene59730:CDS |
| TTTAAAACAGGTAAAGCACC+TGG | 0.639484 | 5.4:+44158213 | None:intergenic |
| CAGGTGCAACTTCATAGCCA+AGG | 0.640916 | 5.4:-44155867 | MS.gene59730:CDS |
| TCAGAAACTATCTCTAGCAA+AGG | 0.645875 | 5.4:+44156220 | None:intergenic |
| TTCACAGGTTGATCTAAACA+GGG | 0.650833 | 5.4:-44156251 | MS.gene59730:intron |
| TGCCCACCACCATACTCCAA+AGG | 0.652919 | 5.4:+44158018 | None:intergenic |
| CATCAGTGGCAAGATCGGGA+AGG | 0.654102 | 5.4:-44151885 | MS.gene59730:CDS |
| GAGGCAAAACTAAACTCCAA+GGG | 0.661032 | 5.4:-44150476 | MS.gene59730:CDS |
| AATATGCAGCAGAATTACAG+AGG | 0.709133 | 5.4:-44156165 | MS.gene59730:CDS |
| AAACAGGTCGAGCAATACCG+AGG | 0.711044 | 5.4:-44150498 | MS.gene59730:CDS |
| CAGGTCGAGCAATACCGAGG+AGG | 0.714009 | 5.4:-44150495 | MS.gene59730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 44150298 | 44158244 | 44150298 | ID=MS.gene59730 |
| chr5.4 | mRNA | 44150298 | 44158244 | 44150298 | ID=MS.gene59730.t1;Parent=MS.gene59730 |
| chr5.4 | exon | 44157936 | 44158244 | 44157936 | ID=MS.gene59730.t1.exon1;Parent=MS.gene59730.t1 |
| chr5.4 | CDS | 44157936 | 44158244 | 44157936 | ID=cds.MS.gene59730.t1;Parent=MS.gene59730.t1 |
| chr5.4 | exon | 44156057 | 44156266 | 44156057 | ID=MS.gene59730.t1.exon2;Parent=MS.gene59730.t1 |
| chr5.4 | CDS | 44156057 | 44156266 | 44156057 | ID=cds.MS.gene59730.t1;Parent=MS.gene59730.t1 |
| chr5.4 | exon | 44155815 | 44155955 | 44155815 | ID=MS.gene59730.t1.exon3;Parent=MS.gene59730.t1 |
| chr5.4 | CDS | 44155815 | 44155955 | 44155815 | ID=cds.MS.gene59730.t1;Parent=MS.gene59730.t1 |
| chr5.4 | exon | 44155501 | 44155704 | 44155501 | ID=MS.gene59730.t1.exon4;Parent=MS.gene59730.t1 |
| chr5.4 | CDS | 44155501 | 44155704 | 44155501 | ID=cds.MS.gene59730.t1;Parent=MS.gene59730.t1 |
| chr5.4 | exon | 44151883 | 44152080 | 44151883 | ID=MS.gene59730.t1.exon5;Parent=MS.gene59730.t1 |
| chr5.4 | CDS | 44151883 | 44152080 | 44151883 | ID=cds.MS.gene59730.t1;Parent=MS.gene59730.t1 |
| chr5.4 | exon | 44151286 | 44151354 | 44151286 | ID=MS.gene59730.t1.exon6;Parent=MS.gene59730.t1 |
| chr5.4 | CDS | 44151286 | 44151354 | 44151286 | ID=cds.MS.gene59730.t1;Parent=MS.gene59730.t1 |
| chr5.4 | exon | 44150461 | 44150577 | 44150461 | ID=MS.gene59730.t1.exon7;Parent=MS.gene59730.t1 |
| chr5.4 | CDS | 44150461 | 44150577 | 44150461 | ID=cds.MS.gene59730.t1;Parent=MS.gene59730.t1 |
| chr5.4 | exon | 44150298 | 44150372 | 44150298 | ID=MS.gene59730.t1.exon8;Parent=MS.gene59730.t1 |
| chr5.4 | CDS | 44150298 | 44150372 | 44150298 | ID=cds.MS.gene59730.t1;Parent=MS.gene59730.t1 |
| Gene Sequence |
| Protein sequence |
