Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061679.t1 | XP_013466720.1 | 99.2 | 127 | 1 | 0 | 1 | 127 | 1 | 127 | 3.70E-57 | 230.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061679.t1 | P80883 | 86.1 | 36 | 5 | 0 | 90 | 125 | 1 | 36 | 1.6e-08 | 60.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061679.t1 | B7FM90 | 99.2 | 127 | 1 | 0 | 1 | 127 | 1 | 127 | 2.7e-57 | 230.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049149 | MS.gene061679 | 0.810477 | 1.13E-50 | -1.69E-46 |
MS.gene049150 | MS.gene061679 | 0.834321 | 3.21E-56 | -1.69E-46 |
MS.gene049151 | MS.gene061679 | 0.806795 | 6.92E-50 | -1.69E-46 |
MS.gene049153 | MS.gene061679 | 0.82813 | 1.07E-54 | -1.69E-46 |
MS.gene049260 | MS.gene061679 | 0.839164 | 1.87E-57 | -1.69E-46 |
MS.gene049284 | MS.gene061679 | 0.82504 | 5.82E-54 | -1.69E-46 |
MS.gene049346 | MS.gene061679 | 0.887267 | 1.66E-72 | -1.69E-46 |
MS.gene049351 | MS.gene061679 | 0.83295 | 7.06E-56 | -1.69E-46 |
MS.gene049356 | MS.gene061679 | 0.805702 | 1.17E-49 | -1.69E-46 |
MS.gene049378 | MS.gene061679 | 0.805064 | 1.60E-49 | -1.69E-46 |
MS.gene049389 | MS.gene061679 | 0.805301 | 1.43E-49 | -1.69E-46 |
MS.gene049491 | MS.gene061679 | 0.832802 | 7.68E-56 | -1.69E-46 |
MS.gene049599 | MS.gene061679 | -0.83624 | 1.05E-56 | -1.69E-46 |
MS.gene049661 | MS.gene061679 | 0.870054 | 1.95E-66 | -1.69E-46 |
MS.gene049662 | MS.gene061679 | 0.871224 | 8.04E-67 | -1.69E-46 |
MS.gene049758 | MS.gene061679 | 0.915189 | 7.91E-85 | -1.69E-46 |
MS.gene049910 | MS.gene061679 | 0.879367 | 1.32E-69 | -1.69E-46 |
MS.gene049915 | MS.gene061679 | 0.837547 | 4.87E-57 | -1.69E-46 |
MS.gene050076 | MS.gene061679 | 0.860608 | 1.83E-63 | -1.69E-46 |
MS.gene050099 | MS.gene061679 | 0.823982 | 1.03E-53 | -1.69E-46 |
MS.gene050128 | MS.gene061679 | 0.86464 | 1.05E-64 | -1.69E-46 |
MS.gene050301 | MS.gene061679 | 0.913994 | 3.22E-84 | -1.69E-46 |
MS.gene050330 | MS.gene061679 | -0.819265 | 1.27E-52 | -1.69E-46 |
MS.gene050397 | MS.gene061679 | 0.889116 | 3.23E-73 | -1.69E-46 |
MS.gene050404 | MS.gene061679 | 0.867953 | 9.36E-66 | -1.69E-46 |
MS.gene050406 | MS.gene061679 | 0.901114 | 3.72E-78 | -1.69E-46 |
MS.gene050426 | MS.gene061679 | -0.826443 | 2.71E-54 | -1.69E-46 |
MS.gene050432 | MS.gene061679 | 0.842221 | 2.95E-58 | -1.69E-46 |
MS.gene050464 | MS.gene061679 | 0.897108 | 1.94E-76 | -1.69E-46 |
MS.gene050529 | MS.gene061679 | 0.904314 | 1.40E-79 | -1.69E-46 |
MS.gene050558 | MS.gene061679 | 0.843327 | 1.50E-58 | -1.69E-46 |
MS.gene050642 | MS.gene061679 | 0.828602 | 8.21E-55 | -1.69E-46 |
MS.gene050650 | MS.gene061679 | 0.809414 | 1.91E-50 | -1.69E-46 |
MS.gene050670 | MS.gene061679 | 0.875983 | 2.00E-68 | -1.69E-46 |
MS.gene050767 | MS.gene061679 | 0.808802 | 2.59E-50 | -1.69E-46 |
MS.gene050770 | MS.gene061679 | 0.811109 | 8.25E-51 | -1.69E-46 |
MS.gene050783 | MS.gene061679 | 0.804818 | 1.80E-49 | -1.69E-46 |
MS.gene050812 | MS.gene061679 | 0.8128 | 3.53E-51 | -1.69E-46 |
MS.gene050971 | MS.gene061679 | 0.806218 | 9.15E-50 | -1.69E-46 |
MS.gene05101 | MS.gene061679 | 0.88651 | 3.21E-72 | -1.69E-46 |
MS.gene05105 | MS.gene061679 | 0.854595 | 1.11E-61 | -1.69E-46 |
MS.gene05119 | MS.gene061679 | -0.840325 | 9.31E-58 | -1.69E-46 |
MS.gene051471 | MS.gene061679 | 0.882602 | 9.08E-71 | -1.69E-46 |
MS.gene051525 | MS.gene061679 | 0.826964 | 2.03E-54 | -1.69E-46 |
MS.gene051582 | MS.gene061679 | 0.882709 | 8.30E-71 | -1.69E-46 |
MS.gene051662 | MS.gene061679 | 0.831925 | 1.27E-55 | -1.69E-46 |
MS.gene051663 | MS.gene061679 | 0.846987 | 1.54E-59 | -1.69E-46 |
MS.gene051860 | MS.gene061679 | 0.869483 | 2.99E-66 | -1.69E-46 |
MS.gene051877 | MS.gene061679 | 0.827745 | 1.32E-54 | -1.69E-46 |
MS.gene051983 | MS.gene061679 | 0.847221 | 1.33E-59 | -1.69E-46 |
MS.gene052011 | MS.gene061679 | -0.838673 | 2.50E-57 | -1.69E-46 |
MS.gene052077 | MS.gene061679 | 0.890676 | 7.94E-74 | -1.69E-46 |
MS.gene052078 | MS.gene061679 | 0.898006 | 8.09E-77 | -1.69E-46 |
MS.gene052135 | MS.gene061679 | 0.803653 | 3.15E-49 | -1.69E-46 |
MS.gene052178 | MS.gene061679 | 0.892437 | 1.59E-74 | -1.69E-46 |
MS.gene052188 | MS.gene061679 | 0.882934 | 6.87E-71 | -1.69E-46 |
MS.gene052207 | MS.gene061679 | 0.81478 | 1.29E-51 | -1.69E-46 |
MS.gene052253 | MS.gene061679 | 0.889338 | 2.65E-73 | -1.69E-46 |
MS.gene052255 | MS.gene061679 | 0.811524 | 6.71E-51 | -1.69E-46 |
MS.gene052310 | MS.gene061679 | 0.892572 | 1.40E-74 | -1.69E-46 |
MS.gene052322 | MS.gene061679 | 0.834606 | 2.72E-56 | -1.69E-46 |
MS.gene052326 | MS.gene061679 | 0.836284 | 1.02E-56 | -1.69E-46 |
MS.gene05233 | MS.gene061679 | -0.801205 | 1.01E-48 | -1.69E-46 |
MS.gene052340 | MS.gene061679 | 0.915871 | 3.51E-85 | -1.69E-46 |
MS.gene052344 | MS.gene061679 | -0.810009 | 1.43E-50 | -1.69E-46 |
MS.gene052421 | MS.gene061679 | 0.824244 | 8.97E-54 | -1.69E-46 |
MS.gene052481 | MS.gene061679 | 0.825357 | 4.90E-54 | -1.69E-46 |
MS.gene052485 | MS.gene061679 | 0.849546 | 3.02E-60 | -1.69E-46 |
MS.gene052917 | MS.gene061679 | -0.820517 | 6.58E-53 | -1.69E-46 |
MS.gene053073 | MS.gene061679 | 0.848169 | 7.27E-60 | -1.69E-46 |
MS.gene053103 | MS.gene061679 | 0.836481 | 9.13E-57 | -1.69E-46 |
MS.gene05316 | MS.gene061679 | 0.827102 | 1.88E-54 | -1.69E-46 |
MS.gene053181 | MS.gene061679 | 0.806852 | 6.73E-50 | -1.69E-46 |
MS.gene053209 | MS.gene061679 | 0.880821 | 4.00E-70 | -1.69E-46 |
MS.gene053322 | MS.gene061679 | 0.801518 | 8.67E-49 | -1.69E-46 |
MS.gene053557 | MS.gene061679 | 0.897826 | 9.65E-77 | -1.69E-46 |
MS.gene053836 | MS.gene061679 | 0.924319 | 8.25E-90 | -1.69E-46 |
MS.gene053907 | MS.gene061679 | 0.84445 | 7.50E-59 | -1.69E-46 |
MS.gene053928 | MS.gene061679 | 0.864848 | 9.05E-65 | -1.69E-46 |
MS.gene053971 | MS.gene061679 | 0.8467 | 1.84E-59 | -1.69E-46 |
MS.gene054010 | MS.gene061679 | 0.820093 | 8.23E-53 | -1.69E-46 |
MS.gene054011 | MS.gene061679 | 0.853969 | 1.68E-61 | -1.69E-46 |
MS.gene054012 | MS.gene061679 | 0.832796 | 7.71E-56 | -1.69E-46 |
MS.gene054013 | MS.gene061679 | 0.827849 | 1.25E-54 | -1.69E-46 |
MS.gene054123 | MS.gene061679 | 0.870914 | 1.02E-66 | -1.69E-46 |
MS.gene05412 | MS.gene061679 | 0.810464 | 1.14E-50 | -1.69E-46 |
MS.gene05413 | MS.gene061679 | 0.807104 | 5.95E-50 | -1.69E-46 |
MS.gene054183 | MS.gene061679 | 0.840927 | 6.47E-58 | -1.69E-46 |
MS.gene054349 | MS.gene061679 | 0.853431 | 2.40E-61 | -1.69E-46 |
MS.gene054376 | MS.gene061679 | 0.833902 | 4.08E-56 | -1.69E-46 |
MS.gene054473 | MS.gene061679 | 0.859613 | 3.66E-63 | -1.69E-46 |
MS.gene054542 | MS.gene061679 | 0.817721 | 2.85E-52 | -1.69E-46 |
MS.gene05455 | MS.gene061679 | 0.838701 | 2.46E-57 | -1.69E-46 |
MS.gene054618 | MS.gene061679 | 0.817776 | 2.77E-52 | -1.69E-46 |
MS.gene054667 | MS.gene061679 | 0.800458 | 1.43E-48 | -1.69E-46 |
MS.gene054719 | MS.gene061679 | 0.800406 | 1.46E-48 | -1.69E-46 |
MS.gene054802 | MS.gene061679 | 0.800732 | 1.26E-48 | -1.69E-46 |
MS.gene054804 | MS.gene061679 | 0.802295 | 6.00E-49 | -1.69E-46 |
MS.gene054918 | MS.gene061679 | 0.846207 | 2.51E-59 | -1.69E-46 |
MS.gene054930 | MS.gene061679 | 0.860346 | 2.20E-63 | -1.69E-46 |
MS.gene054942 | MS.gene061679 | 0.80034 | 1.51E-48 | -1.69E-46 |
MS.gene054955 | MS.gene061679 | 0.815997 | 6.94E-52 | -1.69E-46 |
MS.gene054983 | MS.gene061679 | 0.866949 | 1.96E-65 | -1.69E-46 |
MS.gene055116 | MS.gene061679 | 0.917389 | 5.64E-86 | -1.69E-46 |
MS.gene055254 | MS.gene061679 | 0.816017 | 6.87E-52 | -1.69E-46 |
MS.gene055277 | MS.gene061679 | 0.89967 | 1.57E-77 | -1.69E-46 |
MS.gene055390 | MS.gene061679 | 0.849528 | 3.05E-60 | -1.69E-46 |
MS.gene055422 | MS.gene061679 | 0.911473 | 5.84E-83 | -1.69E-46 |
MS.gene055428 | MS.gene061679 | 0.906641 | 1.19E-80 | -1.69E-46 |
MS.gene055533 | MS.gene061679 | 0.820466 | 6.76E-53 | -1.69E-46 |
MS.gene05553 | MS.gene061679 | 0.880148 | 6.97E-70 | -1.69E-46 |
MS.gene055601 | MS.gene061679 | -0.813772 | 2.16E-51 | -1.69E-46 |
MS.gene055604 | MS.gene061679 | 0.865979 | 3.99E-65 | -1.69E-46 |
MS.gene055712 | MS.gene061679 | 0.878956 | 1.84E-69 | -1.69E-46 |
MS.gene055859 | MS.gene061679 | 0.820065 | 8.35E-53 | -1.69E-46 |
MS.gene056191 | MS.gene061679 | 0.880155 | 6.93E-70 | -1.69E-46 |
MS.gene056407 | MS.gene061679 | 0.891665 | 3.23E-74 | -1.69E-46 |
MS.gene056410 | MS.gene061679 | 0.831405 | 1.70E-55 | -1.69E-46 |
MS.gene056451 | MS.gene061679 | 0.841681 | 4.10E-58 | -1.69E-46 |
MS.gene056497 | MS.gene061679 | 0.812369 | 4.39E-51 | -1.69E-46 |
MS.gene056511 | MS.gene061679 | 0.804006 | 2.66E-49 | -1.69E-46 |
MS.gene056609 | MS.gene061679 | 0.847522 | 1.10E-59 | -1.69E-46 |
MS.gene056612 | MS.gene061679 | 0.903949 | 2.04E-79 | -1.69E-46 |
MS.gene05663 | MS.gene061679 | 0.804464 | 2.13E-49 | -1.69E-46 |
MS.gene056659 | MS.gene061679 | 0.829794 | 4.22E-55 | -1.69E-46 |
MS.gene056719 | MS.gene061679 | 0.812424 | 4.27E-51 | -1.69E-46 |
MS.gene056723 | MS.gene061679 | 0.836743 | 7.82E-57 | -1.69E-46 |
MS.gene056772 | MS.gene061679 | 0.80377 | 2.98E-49 | -1.69E-46 |
MS.gene056796 | MS.gene061679 | 0.829763 | 4.29E-55 | -1.69E-46 |
MS.gene056875 | MS.gene061679 | 0.82202 | 2.96E-53 | -1.69E-46 |
MS.gene056899 | MS.gene061679 | -0.857351 | 1.73E-62 | -1.69E-46 |
MS.gene056902 | MS.gene061679 | 0.808878 | 2.49E-50 | -1.69E-46 |
MS.gene056979 | MS.gene061679 | 0.833294 | 5.79E-56 | -1.69E-46 |
MS.gene05702 | MS.gene061679 | 0.920783 | 8.26E-88 | -1.69E-46 |
MS.gene057121 | MS.gene061679 | 0.856596 | 2.89E-62 | -1.69E-46 |
MS.gene057123 | MS.gene061679 | 0.824632 | 7.27E-54 | -1.69E-46 |
MS.gene057124 | MS.gene061679 | 0.838687 | 2.48E-57 | -1.69E-46 |
MS.gene057245 | MS.gene061679 | 0.859199 | 4.88E-63 | -1.69E-46 |
MS.gene057260 | MS.gene061679 | 0.800924 | 1.15E-48 | -1.69E-46 |
MS.gene057295 | MS.gene061679 | 0.858731 | 6.74E-63 | -1.69E-46 |
MS.gene05733 | MS.gene061679 | 0.85049 | 1.64E-60 | -1.69E-46 |
MS.gene057396 | MS.gene061679 | 0.844097 | 9.34E-59 | -1.69E-46 |
MS.gene057439 | MS.gene061679 | 0.877946 | 4.18E-69 | -1.69E-46 |
MS.gene057448 | MS.gene061679 | 0.857622 | 1.44E-62 | -1.69E-46 |
MS.gene057449 | MS.gene061679 | 0.846554 | 2.02E-59 | -1.69E-46 |
MS.gene057450 | MS.gene061679 | 0.867908 | 9.67E-66 | -1.69E-46 |
MS.gene057469 | MS.gene061679 | 0.812077 | 5.08E-51 | -1.69E-46 |
MS.gene057749 | MS.gene061679 | 0.847334 | 1.24E-59 | -1.69E-46 |
MS.gene057750 | MS.gene061679 | 0.803273 | 3.77E-49 | -1.69E-46 |
MS.gene057754 | MS.gene061679 | 0.835034 | 2.12E-56 | -1.69E-46 |
MS.gene057779 | MS.gene061679 | 0.820583 | 6.35E-53 | -1.69E-46 |
MS.gene057782 | MS.gene061679 | 0.819571 | 1.08E-52 | -1.69E-46 |
MS.gene057794 | MS.gene061679 | 0.8033 | 3.72E-49 | -1.69E-46 |
MS.gene057796 | MS.gene061679 | 0.825461 | 4.63E-54 | -1.69E-46 |
MS.gene057823 | MS.gene061679 | 0.842377 | 2.68E-58 | -1.69E-46 |
MS.gene057825 | MS.gene061679 | 0.816126 | 6.49E-52 | -1.69E-46 |
MS.gene058002 | MS.gene061679 | 0.90426 | 1.48E-79 | -1.69E-46 |
MS.gene058082 | MS.gene061679 | 0.857392 | 1.68E-62 | -1.69E-46 |
MS.gene05811 | MS.gene061679 | 0.887857 | 9.87E-73 | -1.69E-46 |
MS.gene058142 | MS.gene061679 | 0.874107 | 8.74E-68 | -1.69E-46 |
MS.gene058233 | MS.gene061679 | 0.886907 | 2.27E-72 | -1.69E-46 |
MS.gene058276 | MS.gene061679 | 0.863531 | 2.33E-64 | -1.69E-46 |
MS.gene058293 | MS.gene061679 | 0.873531 | 1.37E-67 | -1.69E-46 |
MS.gene058365 | MS.gene061679 | 0.843711 | 1.18E-58 | -1.69E-46 |
MS.gene058660 | MS.gene061679 | 0.887431 | 1.44E-72 | -1.69E-46 |
MS.gene058710 | MS.gene061679 | 0.843374 | 1.46E-58 | -1.69E-46 |
MS.gene058746 | MS.gene061679 | 0.805049 | 1.61E-49 | -1.69E-46 |
MS.gene058749 | MS.gene061679 | 0.846754 | 1.78E-59 | -1.69E-46 |
MS.gene058787 | MS.gene061679 | 0.857189 | 1.93E-62 | -1.69E-46 |
MS.gene058845 | MS.gene061679 | 0.866655 | 2.43E-65 | -1.69E-46 |
MS.gene05886 | MS.gene061679 | 0.845234 | 4.61E-59 | -1.69E-46 |
MS.gene058928 | MS.gene061679 | 0.859206 | 4.86E-63 | -1.69E-46 |
MS.gene059011 | MS.gene061679 | 0.833047 | 6.67E-56 | -1.69E-46 |
MS.gene05907 | MS.gene061679 | 0.900909 | 4.57E-78 | -1.69E-46 |
MS.gene059141 | MS.gene061679 | 0.811655 | 6.28E-51 | -1.69E-46 |
MS.gene059228 | MS.gene061679 | 0.82042 | 6.92E-53 | -1.69E-46 |
MS.gene059247 | MS.gene061679 | 0.803193 | 3.92E-49 | -1.69E-46 |
MS.gene059285 | MS.gene061679 | 0.861548 | 9.50E-64 | -1.69E-46 |
MS.gene059294 | MS.gene061679 | 0.857265 | 1.84E-62 | -1.69E-46 |
MS.gene059326 | MS.gene061679 | 0.822709 | 2.05E-53 | -1.69E-46 |
MS.gene059342 | MS.gene061679 | 0.802784 | 4.76E-49 | -1.69E-46 |
MS.gene059366 | MS.gene061679 | 0.810364 | 1.20E-50 | -1.69E-46 |
MS.gene059420 | MS.gene061679 | 0.855233 | 7.24E-62 | -1.69E-46 |
MS.gene059462 | MS.gene061679 | 0.808223 | 3.44E-50 | -1.69E-46 |
MS.gene059518 | MS.gene061679 | 0.878711 | 2.25E-69 | -1.69E-46 |
MS.gene059597 | MS.gene061679 | 0.899624 | 1.65E-77 | -1.69E-46 |
MS.gene05959 | MS.gene061679 | 0.836697 | 8.04E-57 | -1.69E-46 |
MS.gene059676 | MS.gene061679 | 0.87023 | 1.71E-66 | -1.69E-46 |
MS.gene059688 | MS.gene061679 | 0.898325 | 5.93E-77 | -1.69E-46 |
MS.gene059692 | MS.gene061679 | 0.915486 | 5.56E-85 | -1.69E-46 |
MS.gene059695 | MS.gene061679 | 0.91053 | 1.69E-82 | -1.69E-46 |
MS.gene059708 | MS.gene061679 | 0.825706 | 4.05E-54 | -1.69E-46 |
MS.gene059807 | MS.gene061679 | 0.814112 | 1.82E-51 | -1.69E-46 |
MS.gene05984 | MS.gene061679 | 0.88346 | 4.40E-71 | -1.69E-46 |
MS.gene059894 | MS.gene061679 | 0.91529 | 7.01E-85 | -1.69E-46 |
MS.gene059899 | MS.gene061679 | 0.854744 | 1.00E-61 | -1.69E-46 |
MS.gene059974 | MS.gene061679 | 0.808541 | 2.94E-50 | -1.69E-46 |
MS.gene060005 | MS.gene061679 | 0.802843 | 4.63E-49 | -1.69E-46 |
MS.gene060247 | MS.gene061679 | 0.809156 | 2.17E-50 | -1.69E-46 |
MS.gene06037 | MS.gene061679 | 0.895623 | 8.04E-76 | -1.69E-46 |
MS.gene060403 | MS.gene061679 | 0.874169 | 8.33E-68 | -1.69E-46 |
MS.gene060407 | MS.gene061679 | 0.853752 | 1.94E-61 | -1.69E-46 |
MS.gene060476 | MS.gene061679 | 0.841825 | 3.76E-58 | -1.69E-46 |
MS.gene060495 | MS.gene061679 | 0.836175 | 1.09E-56 | -1.69E-46 |
MS.gene060804 | MS.gene061679 | 0.818849 | 1.58E-52 | -1.69E-46 |
MS.gene06090 | MS.gene061679 | 0.813616 | 2.34E-51 | -1.69E-46 |
MS.gene060986 | MS.gene061679 | 0.803869 | 2.84E-49 | -1.69E-46 |
MS.gene061049 | MS.gene061679 | 0.961155 | 2.25E-119 | -1.69E-46 |
MS.gene061051 | MS.gene061679 | -0.870717 | 1.18E-66 | -1.69E-46 |
MS.gene061112 | MS.gene061679 | 0.842911 | 1.94E-58 | -1.69E-46 |
MS.gene061154 | MS.gene061679 | 0.856511 | 3.06E-62 | -1.69E-46 |
MS.gene061159 | MS.gene061679 | 0.848483 | 5.96E-60 | -1.69E-46 |
MS.gene061265 | MS.gene061679 | 0.837949 | 3.84E-57 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061679.t1 | MTR_1g034260 | 99.213 | 127 | 1 | 0 | 1 | 127 | 1 | 127 | 4.05e-87 | 249 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061679.t1 | AT2G26500 | 60.769 | 130 | 41 | 4 | 1 | 127 | 1 | 123 | 1.62e-43 | 139 |
MS.gene061679.t1 | AT2G26500 | 60.769 | 130 | 41 | 4 | 1 | 127 | 1 | 123 | 1.62e-43 | 139 |
MS.gene061679.t1 | AT2G26500 | 42.188 | 128 | 36 | 4 | 1 | 127 | 1 | 91 | 2.75e-21 | 82.0 |
Find 22 sgRNAs with CRISPR-Local
Find 22 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCTTCTTCCTCCATTTGA+TGG | 0.243886 | 1.3:-19009058 | None:intergenic |
CTTCTTAGTACTCCTTGATT+TGG | 0.303862 | 1.3:-19008900 | None:intergenic |
GTTGTAGGAAGCTCAGTTAT+TGG | 0.363386 | 1.3:+19008875 | MS.gene061679:CDS |
CCATCTACAATCACTGTTGT+AGG | 0.380548 | 1.3:+19008860 | MS.gene061679:CDS |
CAGATTGCAGCTATCATGAA+TGG | 0.408360 | 1.3:+19009124 | MS.gene061679:CDS |
ACTCTTGTTGGTGTTGCTGT+TGG | 0.440680 | 1.3:+19009151 | MS.gene061679:CDS |
AACAGCACTGTGACATCATT+AGG | 0.444506 | 1.3:+19008980 | MS.gene061679:CDS |
CCTACAACAGTGATTGTAGA+TGG | 0.469531 | 1.3:-19008860 | None:intergenic |
ATGAATGGACTTACTCTTGT+TGG | 0.471407 | 1.3:+19009139 | MS.gene061679:CDS |
GGAGGAAGAAGAGGAGGTGC+AGG | 0.478425 | 1.3:+19009067 | MS.gene061679:CDS |
CAAATCAAGGAGTACTAAGA+AGG | 0.488070 | 1.3:+19008901 | MS.gene061679:CDS |
TCATTGAAATATCCATCAAA+TGG | 0.499884 | 1.3:+19009046 | MS.gene061679:CDS |
ACAGGACTGAATTCATTCAA+TGG | 0.502154 | 1.3:+19008944 | MS.gene061679:CDS |
CAGTTATTGGTACCAAATCA+AGG | 0.536139 | 1.3:+19008888 | MS.gene061679:CDS |
TCTTCAACATGTAATGCTGC+AGG | 0.547233 | 1.3:+19009091 | MS.gene061679:CDS |
CCATCAAATGGAGGAAGAAG+AGG | 0.556781 | 1.3:+19009058 | MS.gene061679:CDS |
AAATCAAGGAGTACTAAGAA+GGG | 0.580162 | 1.3:+19008902 | MS.gene061679:CDS |
AACAATGTGAAGTTTATCAC+AGG | 0.583726 | 1.3:+19008926 | MS.gene061679:CDS |
TTGAAATATCCATCAAATGG+AGG | 0.607875 | 1.3:+19009049 | MS.gene061679:CDS |
AAAGCTTGTTCAGTGCACAT+AGG | 0.635805 | 1.3:-19009007 | None:intergenic |
TCAAATGGAGGAAGAAGAGG+AGG | 0.645022 | 1.3:+19009061 | MS.gene061679:CDS |
TGTAGATGGAGTTGTTGCTG+AGG | 0.669064 | 1.3:-19008846 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | TCATTGAAATATCCATCAAA+TGG | + | chr1.3:19009046-19009065 | MS.gene061679:CDS | 25.0% |
AACAATGTGAAGTTTATCAC+AGG | + | chr1.3:19008926-19008945 | MS.gene061679:CDS | 30.0% | |
TTGAAATATCCATCAAATGG+AGG | + | chr1.3:19009049-19009068 | MS.gene061679:CDS | 30.0% | |
!! | AAATCAAGGAGTACTAAGAA+GGG | + | chr1.3:19008902-19008921 | MS.gene061679:CDS | 30.0% |
ACAGGACTGAATTCATTCAA+TGG | + | chr1.3:19008944-19008963 | MS.gene061679:CDS | 35.0% | |
CAGTTATTGGTACCAAATCA+AGG | + | chr1.3:19008888-19008907 | MS.gene061679:CDS | 35.0% | |
CTTCTTAGTACTCCTTGATT+TGG | - | chr1.3:19008903-19008922 | None:intergenic | 35.0% | |
! | ATGAATGGACTTACTCTTGT+TGG | + | chr1.3:19009139-19009158 | MS.gene061679:CDS | 35.0% |
!! | CAAATCAAGGAGTACTAAGA+AGG | + | chr1.3:19008901-19008920 | MS.gene061679:CDS | 35.0% |
AACAGCACTGTGACATCATT+AGG | + | chr1.3:19008980-19008999 | MS.gene061679:CDS | 40.0% | |
CAGATTGCAGCTATCATGAA+TGG | + | chr1.3:19009124-19009143 | MS.gene061679:CDS | 40.0% | |
CCATCTACAATCACTGTTGT+AGG | + | chr1.3:19008860-19008879 | MS.gene061679:CDS | 40.0% | |
CCTACAACAGTGATTGTAGA+TGG | - | chr1.3:19008863-19008882 | None:intergenic | 40.0% | |
GTTGTAGGAAGCTCAGTTAT+TGG | + | chr1.3:19008875-19008894 | MS.gene061679:CDS | 40.0% | |
TCTTCAACATGTAATGCTGC+AGG | + | chr1.3:19009091-19009110 | MS.gene061679:CDS | 40.0% | |
! | AAAGCTTGTTCAGTGCACAT+AGG | - | chr1.3:19009010-19009029 | None:intergenic | 40.0% |
CCATCAAATGGAGGAAGAAG+AGG | + | chr1.3:19009058-19009077 | MS.gene061679:CDS | 45.0% | |
CCTCTTCTTCCTCCATTTGA+TGG | - | chr1.3:19009061-19009080 | None:intergenic | 45.0% | |
TCAAATGGAGGAAGAAGAGG+AGG | + | chr1.3:19009061-19009080 | MS.gene061679:CDS | 45.0% | |
TGTAGATGGAGTTGTTGCTG+AGG | - | chr1.3:19008849-19008868 | None:intergenic | 45.0% | |
!! | ACTCTTGTTGGTGTTGCTGT+TGG | + | chr1.3:19009151-19009170 | MS.gene061679:CDS | 45.0% |
! | GGAGGAAGAAGAGGAGGTGC+AGG | + | chr1.3:19009067-19009086 | MS.gene061679:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 19008836 | 19009219 | 19008836 | ID=MS.gene061679 |
chr1.3 | mRNA | 19008836 | 19009219 | 19008836 | ID=MS.gene061679.t1;Parent=MS.gene061679 |
chr1.3 | exon | 19008836 | 19009219 | 19008836 | ID=MS.gene061679.t1.exon1;Parent=MS.gene061679.t1 |
chr1.3 | CDS | 19008836 | 19009219 | 19008836 | ID=cds.MS.gene061679.t1;Parent=MS.gene061679.t1 |
Gene Sequence |
Protein sequence |