Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062882.t1 | XP_013446016.1 | 96.3 | 295 | 6 | 1 | 1 | 295 | 1 | 290 | 2.10E-159 | 571.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062882.t1 | Q8GYN9 | 76.7 | 301 | 62 | 4 | 1 | 295 | 1 | 299 | 6.2e-128 | 458.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062882.t1 | A0A072TT65 | 96.3 | 295 | 6 | 1 | 1 | 295 | 1 | 290 | 1.5e-159 | 571.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene062882 | 0.836903 | 7.12E-57 | -1.69E-46 |
| MS.gene049284 | MS.gene062882 | 0.822616 | 2.15E-53 | -1.69E-46 |
| MS.gene049346 | MS.gene062882 | 0.830312 | 3.15E-55 | -1.69E-46 |
| MS.gene049351 | MS.gene062882 | 0.83622 | 1.06E-56 | -1.69E-46 |
| MS.gene049389 | MS.gene062882 | 0.843791 | 1.13E-58 | -1.69E-46 |
| MS.gene049427 | MS.gene062882 | 0.815316 | 9.84E-52 | -1.69E-46 |
| MS.gene049491 | MS.gene062882 | 0.866277 | 3.21E-65 | -1.69E-46 |
| MS.gene049599 | MS.gene062882 | -0.805542 | 1.27E-49 | -1.69E-46 |
| MS.gene049614 | MS.gene062882 | 0.821653 | 3.60E-53 | -1.69E-46 |
| MS.gene049661 | MS.gene062882 | 0.836054 | 1.17E-56 | -1.69E-46 |
| MS.gene049662 | MS.gene062882 | 0.838965 | 2.10E-57 | -1.69E-46 |
| MS.gene049758 | MS.gene062882 | 0.900014 | 1.12E-77 | -1.69E-46 |
| MS.gene049760 | MS.gene062882 | 0.800531 | 1.38E-48 | -1.69E-46 |
| MS.gene050076 | MS.gene062882 | 0.879348 | 1.34E-69 | -1.69E-46 |
| MS.gene050099 | MS.gene062882 | 0.880102 | 7.23E-70 | -1.69E-46 |
| MS.gene050128 | MS.gene062882 | 0.871826 | 5.08E-67 | -1.69E-46 |
| MS.gene050301 | MS.gene062882 | 0.924506 | 6.43E-90 | -1.69E-46 |
| MS.gene050397 | MS.gene062882 | 0.84934 | 3.44E-60 | -1.69E-46 |
| MS.gene050404 | MS.gene062882 | 0.848687 | 5.23E-60 | -1.69E-46 |
| MS.gene050406 | MS.gene062882 | 0.848294 | 6.72E-60 | -1.69E-46 |
| MS.gene050432 | MS.gene062882 | 0.859931 | 2.94E-63 | -1.69E-46 |
| MS.gene050464 | MS.gene062882 | 0.833048 | 6.67E-56 | -1.69E-46 |
| MS.gene050529 | MS.gene062882 | 0.860938 | 1.46E-63 | -1.69E-46 |
| MS.gene050558 | MS.gene062882 | 0.806219 | 9.15E-50 | -1.69E-46 |
| MS.gene050767 | MS.gene062882 | 0.855127 | 7.77E-62 | -1.69E-46 |
| MS.gene050770 | MS.gene062882 | 0.856704 | 2.69E-62 | -1.69E-46 |
| MS.gene050783 | MS.gene062882 | 0.825096 | 5.65E-54 | -1.69E-46 |
| MS.gene050812 | MS.gene062882 | 0.815734 | 7.94E-52 | -1.69E-46 |
| MS.gene05101 | MS.gene062882 | 0.911759 | 4.22E-83 | -1.69E-46 |
| MS.gene051240 | MS.gene062882 | 0.804737 | 1.87E-49 | -1.69E-46 |
| MS.gene051242 | MS.gene062882 | 0.804148 | 2.48E-49 | -1.69E-46 |
| MS.gene051471 | MS.gene062882 | 0.894435 | 2.47E-75 | -1.69E-46 |
| MS.gene051582 | MS.gene062882 | 0.82339 | 1.42E-53 | -1.69E-46 |
| MS.gene051662 | MS.gene062882 | 0.850994 | 1.18E-60 | -1.69E-46 |
| MS.gene051663 | MS.gene062882 | 0.864433 | 1.22E-64 | -1.69E-46 |
| MS.gene051860 | MS.gene062882 | 0.829385 | 5.30E-55 | -1.69E-46 |
| MS.gene052078 | MS.gene062882 | 0.903553 | 3.08E-79 | -1.69E-46 |
| MS.gene052178 | MS.gene062882 | 0.898703 | 4.09E-77 | -1.69E-46 |
| MS.gene052188 | MS.gene062882 | 0.84712 | 1.41E-59 | -1.69E-46 |
| MS.gene052207 | MS.gene062882 | 0.835939 | 1.25E-56 | -1.69E-46 |
| MS.gene052253 | MS.gene062882 | 0.815703 | 8.07E-52 | -1.69E-46 |
| MS.gene052287 | MS.gene062882 | 0.848885 | 4.61E-60 | -1.69E-46 |
| MS.gene052290 | MS.gene062882 | 0.835629 | 1.50E-56 | -1.69E-46 |
| MS.gene052310 | MS.gene062882 | 0.860893 | 1.50E-63 | -1.69E-46 |
| MS.gene052326 | MS.gene062882 | 0.902315 | 1.10E-78 | -1.69E-46 |
| MS.gene052340 | MS.gene062882 | 0.866811 | 2.17E-65 | -1.69E-46 |
| MS.gene052344 | MS.gene062882 | -0.813642 | 2.31E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene062882 | 0.822674 | 2.09E-53 | -1.69E-46 |
| MS.gene053073 | MS.gene062882 | 0.82261 | 2.16E-53 | -1.69E-46 |
| MS.gene053103 | MS.gene062882 | 0.809403 | 1.92E-50 | -1.69E-46 |
| MS.gene053181 | MS.gene062882 | 0.804414 | 2.18E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene062882 | 0.860979 | 1.42E-63 | -1.69E-46 |
| MS.gene053322 | MS.gene062882 | 0.818279 | 2.13E-52 | -1.69E-46 |
| MS.gene053557 | MS.gene062882 | 0.870365 | 1.54E-66 | -1.69E-46 |
| MS.gene053836 | MS.gene062882 | 0.889807 | 1.74E-73 | -1.69E-46 |
| MS.gene053907 | MS.gene062882 | 0.825463 | 4.62E-54 | -1.69E-46 |
| MS.gene053928 | MS.gene062882 | 0.819103 | 1.38E-52 | -1.69E-46 |
| MS.gene053971 | MS.gene062882 | 0.831697 | 1.44E-55 | -1.69E-46 |
| MS.gene054011 | MS.gene062882 | 0.818841 | 1.59E-52 | -1.69E-46 |
| MS.gene054012 | MS.gene062882 | 0.807467 | 4.98E-50 | -1.69E-46 |
| MS.gene054013 | MS.gene062882 | 0.808189 | 3.50E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene062882 | 0.855538 | 5.90E-62 | -1.69E-46 |
| MS.gene054214 | MS.gene062882 | 0.827164 | 1.82E-54 | -1.69E-46 |
| MS.gene054376 | MS.gene062882 | 0.878359 | 2.99E-69 | -1.69E-46 |
| MS.gene054473 | MS.gene062882 | 0.834525 | 2.85E-56 | -1.69E-46 |
| MS.gene05455 | MS.gene062882 | 0.882656 | 8.68E-71 | -1.69E-46 |
| MS.gene054618 | MS.gene062882 | 0.819307 | 1.24E-52 | -1.69E-46 |
| MS.gene054802 | MS.gene062882 | 0.835157 | 1.98E-56 | -1.69E-46 |
| MS.gene054803 | MS.gene062882 | 0.834599 | 2.73E-56 | -1.69E-46 |
| MS.gene054804 | MS.gene062882 | 0.836839 | 7.40E-57 | -1.69E-46 |
| MS.gene054983 | MS.gene062882 | 0.806338 | 8.63E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene062882 | 0.839684 | 1.37E-57 | -1.69E-46 |
| MS.gene055254 | MS.gene062882 | 0.851209 | 1.03E-60 | -1.69E-46 |
| MS.gene055277 | MS.gene062882 | 0.907207 | 6.50E-81 | -1.69E-46 |
| MS.gene055303 | MS.gene062882 | 0.832692 | 8.17E-56 | -1.69E-46 |
| MS.gene055390 | MS.gene062882 | 0.887792 | 1.04E-72 | -1.69E-46 |
| MS.gene055397 | MS.gene062882 | 0.808299 | 3.32E-50 | -1.69E-46 |
| MS.gene055412 | MS.gene062882 | 0.804198 | 2.42E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene062882 | 0.904294 | 1.43E-79 | -1.69E-46 |
| MS.gene055428 | MS.gene062882 | 0.904065 | 1.81E-79 | -1.69E-46 |
| MS.gene055499 | MS.gene062882 | 0.81649 | 5.38E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene062882 | 0.840117 | 1.05E-57 | -1.69E-46 |
| MS.gene055712 | MS.gene062882 | 0.868113 | 8.31E-66 | -1.69E-46 |
| MS.gene055896 | MS.gene062882 | 0.839932 | 1.18E-57 | -1.69E-46 |
| MS.gene056191 | MS.gene062882 | 0.852593 | 4.17E-61 | -1.69E-46 |
| MS.gene056314 | MS.gene062882 | 0.821491 | 3.93E-53 | -1.69E-46 |
| MS.gene056407 | MS.gene062882 | 0.845694 | 3.46E-59 | -1.69E-46 |
| MS.gene056410 | MS.gene062882 | 0.847053 | 1.48E-59 | -1.69E-46 |
| MS.gene056451 | MS.gene062882 | 0.808698 | 2.73E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene062882 | 0.854315 | 1.34E-61 | -1.69E-46 |
| MS.gene056612 | MS.gene062882 | 0.90717 | 6.77E-81 | -1.69E-46 |
| MS.gene056772 | MS.gene062882 | 0.818636 | 1.77E-52 | -1.69E-46 |
| MS.gene056796 | MS.gene062882 | 0.826614 | 2.46E-54 | -1.69E-46 |
| MS.gene056902 | MS.gene062882 | 0.803447 | 3.47E-49 | -1.69E-46 |
| MS.gene056931 | MS.gene062882 | 0.810683 | 1.02E-50 | -1.69E-46 |
| MS.gene056933 | MS.gene062882 | 0.814124 | 1.81E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene062882 | 0.805287 | 1.44E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene062882 | 0.881766 | 1.83E-70 | -1.69E-46 |
| MS.gene057121 | MS.gene062882 | 0.848494 | 5.91E-60 | -1.69E-46 |
| MS.gene057123 | MS.gene062882 | 0.806365 | 8.52E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene062882 | 0.812272 | 4.61E-51 | -1.69E-46 |
| MS.gene057245 | MS.gene062882 | 0.834194 | 3.45E-56 | -1.69E-46 |
| MS.gene057295 | MS.gene062882 | 0.856446 | 3.20E-62 | -1.69E-46 |
| MS.gene05733 | MS.gene062882 | 0.855443 | 6.29E-62 | -1.69E-46 |
| MS.gene057439 | MS.gene062882 | 0.868074 | 8.55E-66 | -1.69E-46 |
| MS.gene057448 | MS.gene062882 | 0.822434 | 2.37E-53 | -1.69E-46 |
| MS.gene057449 | MS.gene062882 | 0.814744 | 1.32E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene062882 | 0.839055 | 1.99E-57 | -1.69E-46 |
| MS.gene057796 | MS.gene062882 | 0.808471 | 3.05E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene062882 | 0.879044 | 1.72E-69 | -1.69E-46 |
| MS.gene058082 | MS.gene062882 | 0.854534 | 1.15E-61 | -1.69E-46 |
| MS.gene05811 | MS.gene062882 | 0.88889 | 3.95E-73 | -1.69E-46 |
| MS.gene058142 | MS.gene062882 | 0.837831 | 4.12E-57 | -1.69E-46 |
| MS.gene058233 | MS.gene062882 | 0.846902 | 1.62E-59 | -1.69E-46 |
| MS.gene058236 | MS.gene062882 | 0.807878 | 4.08E-50 | -1.69E-46 |
| MS.gene058276 | MS.gene062882 | 0.843578 | 1.29E-58 | -1.69E-46 |
| MS.gene058293 | MS.gene062882 | 0.877225 | 7.45E-69 | -1.69E-46 |
| MS.gene058365 | MS.gene062882 | 0.839153 | 1.88E-57 | -1.69E-46 |
| MS.gene058660 | MS.gene062882 | 0.890291 | 1.12E-73 | -1.69E-46 |
| MS.gene058749 | MS.gene062882 | 0.813973 | 1.95E-51 | -1.69E-46 |
| MS.gene058787 | MS.gene062882 | 0.847669 | 9.99E-60 | -1.69E-46 |
| MS.gene058845 | MS.gene062882 | 0.857124 | 2.02E-62 | -1.69E-46 |
| MS.gene058928 | MS.gene062882 | 0.801426 | 9.05E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene062882 | 0.877677 | 5.19E-69 | -1.69E-46 |
| MS.gene059228 | MS.gene062882 | 0.838208 | 3.30E-57 | -1.69E-46 |
| MS.gene059294 | MS.gene062882 | 0.810883 | 9.24E-51 | -1.69E-46 |
| MS.gene059326 | MS.gene062882 | 0.848683 | 5.24E-60 | -1.69E-46 |
| MS.gene059342 | MS.gene062882 | 0.834772 | 2.47E-56 | -1.69E-46 |
| MS.gene059518 | MS.gene062882 | 0.895591 | 8.28E-76 | -1.69E-46 |
| MS.gene059536 | MS.gene062882 | 0.80566 | 1.20E-49 | -1.69E-46 |
| MS.gene059597 | MS.gene062882 | 0.887583 | 1.26E-72 | -1.69E-46 |
| MS.gene05959 | MS.gene062882 | 0.832299 | 1.02E-55 | -1.69E-46 |
| MS.gene059676 | MS.gene062882 | 0.862226 | 5.89E-64 | -1.69E-46 |
| MS.gene059688 | MS.gene062882 | 0.847863 | 8.84E-60 | -1.69E-46 |
| MS.gene059692 | MS.gene062882 | 0.875375 | 3.24E-68 | -1.69E-46 |
| MS.gene059695 | MS.gene062882 | 0.875925 | 2.10E-68 | -1.69E-46 |
| MS.gene059708 | MS.gene062882 | 0.85033 | 1.82E-60 | -1.69E-46 |
| MS.gene05984 | MS.gene062882 | 0.859654 | 3.56E-63 | -1.69E-46 |
| MS.gene059894 | MS.gene062882 | 0.913065 | 9.47E-84 | -1.69E-46 |
| MS.gene059899 | MS.gene062882 | 0.838738 | 2.41E-57 | -1.69E-46 |
| MS.gene059960 | MS.gene062882 | 0.841182 | 5.55E-58 | -1.69E-46 |
| MS.gene059974 | MS.gene062882 | 0.840159 | 1.03E-57 | -1.69E-46 |
| MS.gene060005 | MS.gene062882 | 0.851865 | 6.72E-61 | -1.69E-46 |
| MS.gene06037 | MS.gene062882 | 0.889272 | 2.81E-73 | -1.69E-46 |
| MS.gene060407 | MS.gene062882 | 0.857322 | 1.77E-62 | -1.69E-46 |
| MS.gene060476 | MS.gene062882 | 0.863884 | 1.81E-64 | -1.69E-46 |
| MS.gene060495 | MS.gene062882 | 0.802933 | 4.43E-49 | -1.69E-46 |
| MS.gene060559 | MS.gene062882 | 0.819762 | 9.80E-53 | -1.69E-46 |
| MS.gene06090 | MS.gene062882 | 0.823553 | 1.30E-53 | -1.69E-46 |
| MS.gene061049 | MS.gene062882 | 0.90211 | 1.35E-78 | -1.69E-46 |
| MS.gene061051 | MS.gene062882 | -0.860204 | 2.43E-63 | -1.69E-46 |
| MS.gene061112 | MS.gene062882 | 0.847361 | 1.21E-59 | -1.69E-46 |
| MS.gene061200 | MS.gene062882 | 0.814312 | 1.64E-51 | -1.69E-46 |
| MS.gene061265 | MS.gene062882 | 0.847187 | 1.36E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene062882 | MS.gene050322 | PPI |
| MS.gene43051 | MS.gene062882 | PPI |
| MS.gene062882 | MS.gene35396 | PPI |
| MS.gene007227 | MS.gene062882 | PPI |
| MS.gene034468 | MS.gene062882 | PPI |
| MS.gene66767 | MS.gene062882 | PPI |
| MS.gene062882 | MS.gene84339 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062882.t1 | MTR_8g064990 | 96.271 | 295 | 6 | 1 | 1 | 295 | 1 | 290 | 0.0 | 586 |
| MS.gene062882.t1 | MTR_8g064990 | 98.598 | 214 | 3 | 0 | 82 | 295 | 3 | 216 | 1.66e-157 | 439 |
| MS.gene062882.t1 | MTR_4g122220 | 34.928 | 209 | 123 | 3 | 81 | 285 | 14 | 213 | 1.25e-26 | 105 |
| MS.gene062882.t1 | MTR_8g062585 | 85.417 | 48 | 7 | 0 | 160 | 207 | 30 | 77 | 5.60e-24 | 93.2 |
| MS.gene062882.t1 | MTR_8g062580 | 91.304 | 46 | 4 | 0 | 250 | 295 | 8 | 53 | 3.22e-21 | 90.5 |
| MS.gene062882.t1 | MTR_4g100350 | 26.190 | 252 | 177 | 3 | 37 | 285 | 10 | 255 | 3.10e-19 | 86.3 |
| MS.gene062882.t1 | MTR_3g085700 | 29.018 | 224 | 141 | 7 | 66 | 277 | 2 | 219 | 8.94e-16 | 75.9 |
| MS.gene062882.t1 | MTR_2027s0010 | 29.944 | 177 | 111 | 5 | 81 | 252 | 8 | 176 | 1.50e-12 | 66.6 |
| MS.gene062882.t1 | MTR_8g010580 | 27.972 | 143 | 97 | 3 | 86 | 224 | 23 | 163 | 4.25e-11 | 63.2 |
| MS.gene062882.t1 | MTR_8g010580 | 27.972 | 143 | 97 | 3 | 86 | 224 | 23 | 163 | 5.36e-11 | 62.8 |
| MS.gene062882.t1 | MTR_8g010580 | 27.972 | 143 | 97 | 3 | 86 | 224 | 23 | 163 | 6.36e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062882.t1 | AT1G60550 | 76.744 | 301 | 62 | 4 | 1 | 295 | 1 | 299 | 6.66e-169 | 471 |
| MS.gene062882.t1 | AT4G16210 | 34.043 | 235 | 131 | 6 | 69 | 292 | 5 | 226 | 2.48e-28 | 110 |
| MS.gene062882.t1 | AT4G16800 | 31.220 | 205 | 138 | 2 | 82 | 285 | 54 | 256 | 2.55e-23 | 97.4 |
| MS.gene062882.t1 | AT5G65940 | 29.439 | 214 | 126 | 7 | 73 | 275 | 12 | 211 | 2.79e-11 | 63.5 |
| MS.gene062882.t1 | AT5G65940 | 28.972 | 214 | 127 | 7 | 73 | 275 | 12 | 211 | 3.59e-11 | 63.5 |
| MS.gene062882.t1 | AT5G65940 | 28.972 | 214 | 127 | 7 | 73 | 275 | 12 | 211 | 3.87e-11 | 63.5 |
| MS.gene062882.t1 | AT5G65940 | 28.972 | 214 | 127 | 7 | 73 | 275 | 12 | 211 | 3.87e-11 | 63.5 |
Find 76 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCATTGCAATTACTGGTTT+TGG | 0.240337 | 8.2:+36847814 | None:intergenic |
| GGCTGTTGAAGCAGAGAAAA+TGG | 0.259099 | 8.2:-36847284 | MS.gene062882:CDS |
| CCTTAATGTGTTAGACTTGC+AGG | 0.280510 | 8.2:-36848378 | MS.gene062882:intron |
| GATAGTACCATTGCAATTAC+TGG | 0.296354 | 8.2:+36847808 | None:intergenic |
| GCAGCAGATAATGCTATCTT+TGG | 0.320415 | 8.2:-36847649 | MS.gene062882:CDS |
| TTCCTTCTCATGATGTTGTT+TGG | 0.337790 | 8.2:-36849490 | MS.gene062882:CDS |
| TCAAGTTACCAACGTGTTCA+TGG | 0.366573 | 8.2:-36849518 | MS.gene062882:CDS |
| TGACGGGCACGCTGGACTTC+AGG | 0.368255 | 8.2:-36846808 | None:intergenic |
| AATGCTATCTTTGGCCAAAC+TGG | 0.368332 | 8.2:-36847640 | MS.gene062882:CDS |
| CCTGCAAGTCTAACACATTA+AGG | 0.368951 | 8.2:+36848378 | None:intergenic |
| GCAGGGTATGCTGTTGGAGG+AGG | 0.377182 | 8.2:-36847706 | MS.gene062882:CDS |
| AAATAGCCCAACCGCAATTC+GGG | 0.383989 | 8.2:-36846859 | MS.gene062882:CDS |
| GGGAGCTTTGATGCTGGTTA+TGG | 0.384393 | 8.2:-36847481 | MS.gene062882:CDS |
| GTTTCTCACAAGGTTCTATA+CGG | 0.403885 | 8.2:-36847305 | MS.gene062882:CDS |
| CTAACATTAACACAGGTTGC+AGG | 0.410643 | 8.2:-36847724 | MS.gene062882:intron |
| TATTCTGATCATGAAAATAT+CGG | 0.418618 | 8.2:-36848404 | MS.gene062882:CDS |
| GAAATAGCCCAACCGCAATT+CGG | 0.424489 | 8.2:-36846860 | MS.gene062882:CDS |
| GAAGCACCTTAGGACCAGTT+TGG | 0.426368 | 8.2:+36847626 | None:intergenic |
| AGGAGGGCATATATTGCATA+TGG | 0.429416 | 8.2:-36847689 | MS.gene062882:CDS |
| TTCTCATGATGTTGTTTGGA+AGG | 0.432166 | 8.2:-36849486 | MS.gene062882:CDS |
| ATGTCTTTGTTGTTTGCCAT+TGG | 0.466222 | 8.2:+36849641 | None:intergenic |
| TTGAGAACCCGAATTGCGGT+TGG | 0.473250 | 8.2:+36846852 | None:intergenic |
| CGAAAAGCATTCCTTCTCTC+AGG | 0.474072 | 8.2:+36849167 | None:intergenic |
| CTATTAATGCAGTGGATGAC+GGG | 0.487601 | 8.2:-36846824 | MS.gene062882:CDS |
| AAGTTCTATCATGTCACGTT+TGG | 0.491658 | 8.2:-36847458 | MS.gene062882:intron |
| CTGGTACAACAGTATTGATA+AGG | 0.497909 | 8.2:+36847260 | None:intergenic |
| GCTATTAATGCAGTGGATGA+CGG | 0.498064 | 8.2:-36846825 | MS.gene062882:CDS |
| TGAGAACCCGAATTGCGGTT+GGG | 0.503855 | 8.2:+36846853 | None:intergenic |
| AAGAAACAATCAAATGGTGT+AGG | 0.506674 | 8.2:-36846893 | MS.gene062882:CDS |
| TCATGATCAGAATAACCATC+TGG | 0.512939 | 8.2:+36848413 | None:intergenic |
| CTTTGGCCAAACTGGTCCTA+AGG | 0.517904 | 8.2:-36847632 | MS.gene062882:intron |
| TTGATGTTGGAGAGGAAACA+AGG | 0.525526 | 8.2:+36849579 | None:intergenic |
| CTTGGCAATTCCTTCACCAA+CGG | 0.525754 | 8.2:+36849406 | None:intergenic |
| GCTGTTGAAGCAGAGAAAAT+GGG | 0.526704 | 8.2:-36847283 | MS.gene062882:CDS |
| TTCAGATGATGATGAAGGAA+AGG | 0.527599 | 8.2:-36849456 | MS.gene062882:CDS |
| GTTGGTGTCATCATTCTCAC+TGG | 0.529021 | 8.2:-36849086 | MS.gene062882:CDS |
| ATTCCTTCAGATGATGATGA+AGG | 0.536133 | 8.2:-36849461 | MS.gene062882:CDS |
| TGGAGAGGAAACAAGGTGGT+TGG | 0.539271 | 8.2:+36849586 | None:intergenic |
| GGTGGTGGTGATATTGATGT+TGG | 0.539487 | 8.2:+36849566 | None:intergenic |
| AACCGCAATTCGGGTTCTCA+AGG | 0.543466 | 8.2:-36846850 | MS.gene062882:CDS |
| AGAAACAATCAAATGGTGTA+GGG | 0.550444 | 8.2:-36846892 | MS.gene062882:CDS |
| TTTCCTTCATCATCATCTGA+AGG | 0.551061 | 8.2:+36849458 | None:intergenic |
| AAGGTTGGGAGCTTTGATGC+TGG | 0.551127 | 8.2:-36847487 | MS.gene062882:CDS |
| CAGGTTGCAGGGTATGCTGT+TGG | 0.551508 | 8.2:-36847712 | MS.gene062882:CDS |
| CAGGGTATGCTGTTGGAGGA+GGG | 0.554607 | 8.2:-36847705 | MS.gene062882:CDS |
| CATCTGGAGTCCTCAAGGCT+TGG | 0.556853 | 8.2:+36848429 | None:intergenic |
| GATAGCATTATCTGCTGCAA+TGG | 0.558797 | 8.2:+36847654 | None:intergenic |
| TATGAGAAATCCGTTGGTGA+AGG | 0.569437 | 8.2:-36849416 | MS.gene062882:CDS |
| TAACATTAACACAGGTTGCA+GGG | 0.569695 | 8.2:-36847723 | MS.gene062882:intron |
| GTTGCAGGGTATGCTGTTGG+AGG | 0.577134 | 8.2:-36847709 | MS.gene062882:CDS |
| GCTAGAGATGATCCCTCTGT+TGG | 0.578549 | 8.2:-36849104 | MS.gene062882:CDS |
| ATAACCATCTGGAGTCCTCA+AGG | 0.585989 | 8.2:+36848424 | None:intergenic |
| AAGGAAATAAGTTGAGGTGG+TGG | 0.591859 | 8.2:+36849551 | None:intergenic |
| GTGAAATGTGGTTTCTCACA+AGG | 0.596317 | 8.2:-36847315 | MS.gene062882:CDS |
| GGAACAGATGCGTTCTGTAG+TGG | 0.596532 | 8.2:-36848458 | MS.gene062882:CDS |
| CGTTGGTGAAGGAATTGCCA+AGG | 0.597323 | 8.2:-36849405 | MS.gene062882:intron |
| CAAGGCAGCTATTAATGCAG+TGG | 0.600034 | 8.2:-36846832 | MS.gene062882:CDS |
| TGTCATCATTCTCACTGGAA+AGG | 0.600797 | 8.2:-36849081 | MS.gene062882:intron |
| TTCCAAACAACATCATGAGA+AGG | 0.606798 | 8.2:+36849488 | None:intergenic |
| TGCCTTGAGAACCCGAATTG+CGG | 0.609132 | 8.2:+36846848 | None:intergenic |
| GCAGTGGATGACGGGCACGC+TGG | 0.611049 | 8.2:-36846816 | MS.gene062882:CDS |
| CACAAGGAAATAAGTTGAGG+TGG | 0.624126 | 8.2:+36849548 | None:intergenic |
| AGAATGATGACACCAACAGA+GGG | 0.629795 | 8.2:+36849092 | None:intergenic |
| CAAGCCTTGAGGACTCCAGA+TGG | 0.630119 | 8.2:-36848428 | MS.gene062882:CDS |
| TCCAAAACCAGTAATTGCAA+TGG | 0.632257 | 8.2:-36847815 | MS.gene062882:intron |
| GAGAATGATGACACCAACAG+AGG | 0.638786 | 8.2:+36849091 | None:intergenic |
| ATCAGCTCCTTAATCGTGTG+AGG | 0.645905 | 8.2:+36849143 | None:intergenic |
| GTATTAATAGGCCTGAGAGA+AGG | 0.646223 | 8.2:-36849178 | MS.gene062882:CDS |
| TGACACAAGGAAATAAGTTG+AGG | 0.649038 | 8.2:+36849545 | None:intergenic |
| ATTGTCTATGAGAAATCCGT+TGG | 0.649414 | 8.2:-36849422 | MS.gene062882:CDS |
| ACAGATGCGTTCTGTAGTGG+TGG | 0.672100 | 8.2:-36848455 | MS.gene062882:CDS |
| TGGTGATATTGATGTTGGAG+AGG | 0.678621 | 8.2:+36849571 | None:intergenic |
| GTAACTTGAAGTGTGACACA+AGG | 0.684211 | 8.2:+36849532 | None:intergenic |
| GAACATCACCATGAACACGT+TGG | 0.725959 | 8.2:+36849510 | None:intergenic |
| ATGTTGGAGAGGAAACAAGG+TGG | 0.769684 | 8.2:+36849582 | None:intergenic |
| GTGGTGGTGACCAAGCCTTG+AGG | 0.785466 | 8.2:-36848439 | MS.gene062882:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATAAATAACTTCAAATA+TGG | + | chr8.2:36847177-36847196 | None:intergenic | 10.0% |
| !!! | ATATATTGTCTTTAAAATTA+TGG | - | chr8.2:36848344-36848363 | MS.gene062882:intron | 10.0% |
| !! | TACAAATGTTAAAATGAAAA+TGG | + | chr8.2:36848856-36848875 | None:intergenic | 15.0% |
| !! | TTACAAAACAATAAAGTAAA+TGG | + | chr8.2:36847411-36847430 | None:intergenic | 15.0% |
| !! | TAGAAAAAGAAACAATCAAA+TGG | - | chr8.2:36849548-36849567 | MS.gene062882:CDS | 20.0% |
| !! | TATTCTGATCATGAAAATAT+CGG | - | chr8.2:36848043-36848062 | MS.gene062882:intron | 20.0% |
| !!! | AAGCACATTTTTTTATCTTT+TGG | + | chr8.2:36849083-36849102 | None:intergenic | 20.0% |
| !!! | AATGATATATTGATGATGTA+GGG | - | chr8.2:36847968-36847987 | MS.gene062882:intron | 20.0% |
| !!! | ACAATATATCAGTTTTTCAT+TGG | + | chr8.2:36848333-36848352 | None:intergenic | 20.0% |
| !!! | ATTTTTCTCATTACAAATCA+TGG | + | chr8.2:36848514-36848533 | None:intergenic | 20.0% |
| !!! | TAATGATATATTGATGATGT+AGG | - | chr8.2:36847967-36847986 | MS.gene062882:intron | 20.0% |
| !!! | TAATTTTAGTTTCTCCTTTA+AGG | - | chr8.2:36849250-36849269 | MS.gene062882:intron | 20.0% |
| !!! | TAGAAAAATCTGGAATAAAT+CGG | + | chr8.2:36848101-36848120 | None:intergenic | 20.0% |
| !!! | TTTTGCAGATTAGTATTAAT+AGG | - | chr8.2:36847257-36847276 | MS.gene062882:intron | 20.0% |
| ! | AAGCAAAAAGAAAATGAGAA+AGG | + | chr8.2:36847079-36847098 | None:intergenic | 25.0% |
| ! | AATTCCAAACATAACCTTAA+AGG | + | chr8.2:36849267-36849286 | None:intergenic | 25.0% |
| ! | AATTTGAGGACTAAATTAAC+CGG | + | chr8.2:36848272-36848291 | None:intergenic | 25.0% |
| ! | ATAATGATTGGATTAACAAG+TGG | + | chr8.2:36847478-36847497 | None:intergenic | 25.0% |
| ! | GAGACTGTTTGTATAATTTA+GGG | - | chr8.2:36847210-36847229 | MS.gene062882:intron | 25.0% |
| ! | TCAAATATGGCAATTCAAAA+TGG | + | chr8.2:36847164-36847183 | None:intergenic | 25.0% |
| ! | TCTACTAAATTAGAGAACAT+TGG | + | chr8.2:36848399-36848418 | None:intergenic | 25.0% |
| ! | TGAGACTGTTTGTATAATTT+AGG | - | chr8.2:36847209-36847228 | MS.gene062882:intron | 25.0% |
| ! | TGCTGATAAAATAAAACCAA+TGG | + | chr8.2:36847591-36847610 | None:intergenic | 25.0% |
| ! | TTCACACAAATAGAAAAATC+TGG | + | chr8.2:36848111-36848130 | None:intergenic | 25.0% |
| ! | TTCATTATCATTGTATTGCA+TGG | - | chr8.2:36849429-36849448 | MS.gene062882:CDS | 25.0% |
| ! | TTTCTCAAACAACATTATAC+TGG | + | chr8.2:36848217-36848236 | None:intergenic | 25.0% |
| !! | ACTAGTTGTATGATAATGAT+TGG | + | chr8.2:36847490-36847509 | None:intergenic | 25.0% |
| !! | TTATTTGCTAACATTAACAC+AGG | - | chr8.2:36848716-36848735 | MS.gene062882:intron | 25.0% |
| !!! | AGTTAATGCAATGTTTTGAT+TGG | - | chr8.2:36849510-36849529 | MS.gene062882:CDS | 25.0% |
| !!! | ATTGTTATTTCTCCAATTTG+AGG | - | chr8.2:36848423-36848442 | MS.gene062882:CDS | 25.0% |
| !!! | GTATCTCTTTGTTATTTTTG+AGG | - | chr8.2:36848155-36848174 | MS.gene062882:intron | 25.0% |
| !!! | TTGTTATTTCTCCAATTTGA+GGG | - | chr8.2:36848424-36848443 | MS.gene062882:CDS | 25.0% |
| AAAAATGTGCTTCTCAATAC+AGG | - | chr8.2:36849091-36849110 | MS.gene062882:CDS | 30.0% | |
| AAAATTATGGTGCTTGATTC+TGG | - | chr8.2:36848357-36848376 | MS.gene062882:intron | 30.0% | |
| AAAGAGATACCTTGAGTAAT+GGG | + | chr8.2:36848145-36848164 | None:intergenic | 30.0% | |
| AACCATTCAATTCTGCATTA+AGG | + | chr8.2:36847946-36847965 | None:intergenic | 30.0% | |
| AAGAAACAATCAAATGGTGT+AGG | - | chr8.2:36849554-36849573 | MS.gene062882:CDS | 30.0% | |
| AGAAACAATCAAATGGTGTA+GGG | - | chr8.2:36849555-36849574 | MS.gene062882:CDS | 30.0% | |
| AGATGTTACAAAAGACGAAA+AGG | + | chr8.2:36848924-36848943 | None:intergenic | 30.0% | |
| AGGAGAAACTAAAATTACAG+TGG | + | chr8.2:36849247-36849266 | None:intergenic | 30.0% | |
| ATCATATGATGCTTTCAGTA+CGG | - | chr8.2:36847693-36847712 | MS.gene062882:CDS | 30.0% | |
| ATCCTTAATGCAGAATTGAA+TGG | - | chr8.2:36847941-36847960 | MS.gene062882:intron | 30.0% | |
| ATGTTACAAAAGACGAAAAG+GGG | + | chr8.2:36848922-36848941 | None:intergenic | 30.0% | |
| CAAAAAGAAAATGAGAAAGG+TGG | + | chr8.2:36847076-36847095 | None:intergenic | 30.0% | |
| GATGTTACAAAAGACGAAAA+GGG | + | chr8.2:36848923-36848942 | None:intergenic | 30.0% | |
| TAAGTCACATGACAAGTTAA+TGG | + | chr8.2:36847516-36847535 | None:intergenic | 30.0% | |
| TCATGAAATGATCAACTTGA+TGG | - | chr8.2:36847647-36847666 | MS.gene062882:CDS | 30.0% | |
| ! | ATTGGTTTCAACTGATGTTA+GGG | + | chr8.2:36848315-36848334 | None:intergenic | 30.0% |
| ! | GTCTAAGTTGAAGAAATGTT+GGG | - | chr8.2:36847232-36847251 | MS.gene062882:intron | 30.0% |
| ! | GTTTTCAAAACCAAACCATA+CGG | - | chr8.2:36847728-36847747 | MS.gene062882:intron | 30.0% |
| ! | TCATTCTTTTCTCCTATTAC+AGG | - | chr8.2:36848593-36848612 | MS.gene062882:intron | 30.0% |
| ! | TCTTGTCTTTGTATCGATAA+AGG | - | chr8.2:36848941-36848960 | MS.gene062882:intron | 30.0% |
| ! | TCTTTGTATCGATAAAGGTT+GGG | - | chr8.2:36848946-36848965 | MS.gene062882:intron | 30.0% |
| ! | TTTTGTCCGTCAAATTGTAA+GGG | - | chr8.2:36848246-36848265 | MS.gene062882:intron | 30.0% |
| ! | TTTTTGTCCGTCAAATTGTA+AGG | - | chr8.2:36848245-36848264 | MS.gene062882:intron | 30.0% |
| !! | TTATTTTATAGGGCATGTTG+AGG | - | chr8.2:36847434-36847453 | MS.gene062882:intron | 30.0% |
| !! | TTCTCCTTTAAGGTTATGTT+TGG | - | chr8.2:36849260-36849279 | MS.gene062882:intron | 30.0% |
| !! | TTGTTTTGTTCAAGTGACTT+TGG | - | chr8.2:36847560-36847579 | MS.gene062882:intron | 30.0% |
| !!! | TTTTGAGGCATTCATTTCAA+TGG | - | chr8.2:36848170-36848189 | MS.gene062882:intron | 30.0% |
| AAAGTGATTCCCATTACTCA+AGG | - | chr8.2:36848133-36848152 | MS.gene062882:intron | 35.0% | |
| AAGAAAATGAGAAAGGTGGA+AGG | + | chr8.2:36847072-36847091 | None:intergenic | 35.0% | |
| AAGTTCTATCATGTCACGTT+TGG | - | chr8.2:36848989-36849008 | MS.gene062882:intron | 35.0% | |
| ACTATTACTCTCTCTTAGCT+AGG | - | chr8.2:36847137-36847156 | MS.gene062882:intron | 35.0% | |
| AGTGACTTTGGATATTCCAT+TGG | - | chr8.2:36847572-36847591 | MS.gene062882:intron | 35.0% | |
| ATTGTCTATGAGAAATCCGT+TGG | - | chr8.2:36847025-36847044 | MS.gene062882:intron | 35.0% | |
| CAAAGAGATACCTTGAGTAA+TGG | + | chr8.2:36848146-36848165 | None:intergenic | 35.0% | |
| GATAGTACCATTGCAATTAC+TGG | + | chr8.2:36848642-36848661 | None:intergenic | 35.0% | |
| GTCTTAAGTGACAAACTACA+TGG | + | chr8.2:36847914-36847933 | None:intergenic | 35.0% | |
| GTGCACAAAAAAGTGAGATT+TGG | + | chr8.2:36848675-36848694 | None:intergenic | 35.0% | |
| GTTTCTCACAAGGTTCTATA+CGG | - | chr8.2:36849142-36849161 | MS.gene062882:CDS | 35.0% | |
| TAACATTAACACAGGTTGCA+GGG | - | chr8.2:36848724-36848743 | MS.gene062882:intron | 35.0% | |
| TAGTCCTCAAATTCACGAAA+TGG | - | chr8.2:36848279-36848298 | MS.gene062882:intron | 35.0% | |
| TCATGATCAGAATAACCATC+TGG | + | chr8.2:36848037-36848056 | None:intergenic | 35.0% | |
| TCCAAAACCAGTAATTGCAA+TGG | - | chr8.2:36848632-36848651 | MS.gene062882:intron | 35.0% | |
| TGACACAAGGAAATAAGTTG+AGG | + | chr8.2:36846905-36846924 | None:intergenic | 35.0% | |
| TGAGTGTTCTATGAATGGAA+TGG | + | chr8.2:36849224-36849243 | None:intergenic | 35.0% | |
| TTCCAAACAACATCATGAGA+AGG | + | chr8.2:36846962-36846981 | None:intergenic | 35.0% | |
| TTCCTTCTCATGATGTTGTT+TGG | - | chr8.2:36846957-36846976 | MS.gene062882:intron | 35.0% | |
| TTGGTTTCAACTGATGTTAG+GGG | + | chr8.2:36848314-36848333 | None:intergenic | 35.0% | |
| TTTCATGACAAGTGACAACA+TGG | + | chr8.2:36847635-36847654 | None:intergenic | 35.0% | |
| TTTCCTTCATCATCATCTGA+AGG | + | chr8.2:36846992-36847011 | None:intergenic | 35.0% | |
| ! | AAATAATTTGCAGCTGCAGA+AGG | + | chr8.2:36848702-36848721 | None:intergenic | 35.0% |
| ! | ATTCCTTCAGATGATGATGA+AGG | - | chr8.2:36846986-36847005 | MS.gene062882:intron | 35.0% |
| ! | ATTGCCATTTCGTGAATTTG+AGG | + | chr8.2:36848286-36848305 | None:intergenic | 35.0% |
| ! | CTAAAAAAGCACGTGAAATG+TGG | - | chr8.2:36849120-36849139 | MS.gene062882:CDS | 35.0% |
| ! | GCAAATTATTGAAGCACCTT+AGG | + | chr8.2:36848834-36848853 | None:intergenic | 35.0% |
| ! | GGTCTAAGTTGAAGAAATGT+TGG | - | chr8.2:36847231-36847250 | MS.gene062882:intron | 35.0% |
| ! | GTCTTTGTATCGATAAAGGT+TGG | - | chr8.2:36848945-36848964 | MS.gene062882:intron | 35.0% |
| ! | TTCAGATGATGATGAAGGAA+AGG | - | chr8.2:36846991-36847010 | MS.gene062882:intron | 35.0% |
| ! | TTCTCATGATGTTGTTTGGA+AGG | - | chr8.2:36846961-36846980 | MS.gene062882:intron | 35.0% |
| !! | CATTGGTTTCAACTGATGTT+AGG | + | chr8.2:36848316-36848335 | None:intergenic | 35.0% |
| !! | CTGGTACAACAGTATTGATA+AGG | + | chr8.2:36849190-36849209 | None:intergenic | 35.0% |
| !!! | ACCATTGCAATTACTGGTTT+TGG | + | chr8.2:36848636-36848655 | None:intergenic | 35.0% |
| !!! | CACATTTCACGTGCTTTTTT+AGG | + | chr8.2:36849122-36849141 | None:intergenic | 35.0% |
| !!! | TTGCAATTACTGGTTTTGGA+AGG | + | chr8.2:36848632-36848651 | None:intergenic | 35.0% |
| AATGCTATCTTTGGCCAAAC+TGG | - | chr8.2:36848807-36848826 | MS.gene062882:intron | 40.0% | |
| AGAATGATGACACCAACAGA+GGG | + | chr8.2:36847358-36847377 | None:intergenic | 40.0% | |
| AGTGGTGAGTGTTCTATGAA+TGG | + | chr8.2:36849229-36849248 | None:intergenic | 40.0% | |
| ATGTGCTTCTCAATACAGGT+AGG | - | chr8.2:36849095-36849114 | MS.gene062882:CDS | 40.0% | |
| CCTGCAAGTCTAACACATTA+AGG | + | chr8.2:36848072-36848091 | None:intergenic | 40.0% | |
| CCTTAATGTGTTAGACTTGC+AGG | - | chr8.2:36848069-36848088 | MS.gene062882:intron | 40.0% | |
| CCTTGAACTAGACTTTACTG+CGG | - | chr8.2:36847765-36847784 | MS.gene062882:intron | 40.0% | |
| CTAACATTAACACAGGTTGC+AGG | - | chr8.2:36848723-36848742 | MS.gene062882:intron | 40.0% | |
| CTATTAATGCAGTGGATGAC+GGG | - | chr8.2:36849623-36849642 | MS.gene062882:CDS | 40.0% | |
| GATAGCATTATCTGCTGCAA+TGG | + | chr8.2:36848796-36848815 | None:intergenic | 40.0% | |
| GCAGCAGATAATGCTATCTT+TGG | - | chr8.2:36848798-36848817 | MS.gene062882:intron | 40.0% | |
| GCTATTAATGCAGTGGATGA+CGG | - | chr8.2:36849622-36849641 | MS.gene062882:CDS | 40.0% | |
| GCTGTTGAAGCAGAGAAAAT+GGG | - | chr8.2:36849164-36849183 | MS.gene062882:CDS | 40.0% | |
| GGATTTGAACTGCTTGAACT+TGG | + | chr8.2:36847808-36847827 | None:intergenic | 40.0% | |
| GGCAATTTAGTCCCTCAAAT+TGG | + | chr8.2:36848438-36848457 | None:intergenic | 40.0% | |
| GTAAATGGCAGTAGCAGAAA+AGG | + | chr8.2:36847396-36847415 | None:intergenic | 40.0% | |
| GTAACTTGAAGTGTGACACA+AGG | + | chr8.2:36846918-36846937 | None:intergenic | 40.0% | |
| GTATTAATAGGCCTGAGAGA+AGG | - | chr8.2:36847269-36847288 | MS.gene062882:CDS | 40.0% | |
| GTGAAATGTGGTTTCTCACA+AGG | - | chr8.2:36849132-36849151 | MS.gene062882:CDS | 40.0% | |
| TACAAAAGACGAAAAGGGGA+TGG | + | chr8.2:36848918-36848937 | None:intergenic | 40.0% | |
| TCAAGTTACCAACGTGTTCA+TGG | - | chr8.2:36846929-36846948 | MS.gene062882:intron | 40.0% | |
| TGGAATGGAAAGAAGCTTAC+TGG | + | chr8.2:36849209-36849228 | None:intergenic | 40.0% | |
| TGGTGATATTGATGTTGGAG+AGG | + | chr8.2:36846879-36846898 | None:intergenic | 40.0% | |
| TGTCATCATTCTCACTGGAA+AGG | - | chr8.2:36847366-36847385 | MS.gene062882:intron | 40.0% | |
| TTGATGTTGGAGAGGAAACA+AGG | + | chr8.2:36846871-36846890 | None:intergenic | 40.0% | |
| ! | AAGGAAATAAGTTGAGGTGG+TGG | + | chr8.2:36846899-36846918 | None:intergenic | 40.0% |
| ! | AGGAGGGCATATATTGCATA+TGG | - | chr8.2:36848758-36848777 | MS.gene062882:intron | 40.0% |
| ! | AGTCTAGTTCAAGGTTCAAC+CGG | + | chr8.2:36847759-36847778 | None:intergenic | 40.0% |
| ! | CACAAGGAAATAAGTTGAGG+TGG | + | chr8.2:36846902-36846921 | None:intergenic | 40.0% |
| ! | TATGAGAAATCCGTTGGTGA+AGG | - | chr8.2:36847031-36847050 | MS.gene062882:intron | 40.0% |
| ! | TTTTCGACCTCACACGATTA+AGG | - | chr8.2:36847297-36847316 | MS.gene062882:CDS | 40.0% |
| !! | CCTTTGACTTGAGACTTGTT+GGG | + | chr8.2:36848459-36848478 | None:intergenic | 40.0% |
| !! | TCCTTTGACTTGAGACTTGT+TGG | + | chr8.2:36848460-36848479 | None:intergenic | 40.0% |
| !!! | CAATTACTGGTTTTGGAAGG+CGG | + | chr8.2:36848629-36848648 | None:intergenic | 40.0% |
| AAATAGCCCAACCGCAATTC+GGG | - | chr8.2:36849588-36849607 | MS.gene062882:CDS | 45.0% | |
| AACCGGCCCTTACAATTTGA+CGG | + | chr8.2:36848255-36848274 | None:intergenic | 45.0% | |
| ACCAAACCATACGGTTCAAC+CGG | - | chr8.2:36847737-36847756 | MS.gene062882:intron | 45.0% | |
| AGACATTCGAACGCGAGAAA+TGG | + | chr8.2:36849301-36849320 | None:intergenic | 45.0% | |
| ATCAGCTCCTTAATCGTGTG+AGG | + | chr8.2:36847307-36847326 | None:intergenic | 45.0% | |
| ATGTTGGAGAGGAAACAAGG+TGG | + | chr8.2:36846868-36846887 | None:intergenic | 45.0% | |
| ATTCGAACGCGAGAAATGGA+AGG | + | chr8.2:36849297-36849316 | None:intergenic | 45.0% | |
| CAAGGCAGCTATTAATGCAG+TGG | - | chr8.2:36849615-36849634 | MS.gene062882:CDS | 45.0% | |
| CCCAACAAGTCTCAAGTCAA+AGG | - | chr8.2:36848456-36848475 | MS.gene062882:CDS | 45.0% | |
| CTTGGCAATTCCTTCACCAA+CGG | + | chr8.2:36847044-36847063 | None:intergenic | 45.0% | |
| GAAATAGCCCAACCGCAATT+CGG | - | chr8.2:36849587-36849606 | MS.gene062882:CDS | 45.0% | |
| GAACATCACCATGAACACGT+TGG | + | chr8.2:36846940-36846959 | None:intergenic | 45.0% | |
| GAGAATGATGACACCAACAG+AGG | + | chr8.2:36847359-36847378 | None:intergenic | 45.0% | |
| GCTTGAACTTGGACGAAACT+GGG | + | chr8.2:36847797-36847816 | None:intergenic | 45.0% | |
| GGCTGTTGAAGCAGAGAAAA+TGG | - | chr8.2:36849163-36849182 | MS.gene062882:CDS | 45.0% | |
| TGCTTGAACTTGGACGAAAC+TGG | + | chr8.2:36847798-36847817 | None:intergenic | 45.0% | |
| ! | ATAACCATCTGGAGTCCTCA+AGG | + | chr8.2:36848026-36848045 | None:intergenic | 45.0% |
| ! | CCGCAGTAAAGTCTAGTTCA+AGG | + | chr8.2:36847768-36847787 | None:intergenic | 45.0% |
| ! | CTATCATGTCACGTTTGGTG+AGG | - | chr8.2:36848994-36849013 | MS.gene062882:intron | 45.0% |
| ! | GGTGGTGGTGATATTGATGT+TGG | + | chr8.2:36846884-36846903 | None:intergenic | 45.0% |
| !! | CGAAAAGCATTCCTTCTCTC+AGG | + | chr8.2:36847283-36847302 | None:intergenic | 45.0% |
| !! | GTTGGTGTCATCATTCTCAC+TGG | - | chr8.2:36847361-36847380 | MS.gene062882:intron | 45.0% |
| !!! | TTTGTAAAATTTATTTTATA+GGG | - | chr8.2:36847424-36847443 | MS.gene062882:intron | 5.0% |
| !!! | TTTTGTAAAATTTATTTTAT+AGG | - | chr8.2:36847423-36847442 | MS.gene062882:intron | 5.0% |
| AATCCGTTGACGTGACTCAG+AGG | - | chr8.2:36847823-36847842 | MS.gene062882:CDS | 50.0% | |
| ACAGATGCGTTCTGTAGTGG+TGG | - | chr8.2:36847992-36848011 | MS.gene062882:intron | 50.0% | |
| ACCGGTTGAACCGTATGGTT+TGG | + | chr8.2:36847741-36847760 | None:intergenic | 50.0% | |
| AGACCTCTGAGTCACGTCAA+CGG | + | chr8.2:36847829-36847848 | None:intergenic | 50.0% | |
| CTTTGGCCAAACTGGTCCTA+AGG | - | chr8.2:36848815-36848834 | MS.gene062882:intron | 50.0% | |
| GAAAGGTGGAAGGACAACCT+TGG | + | chr8.2:36847062-36847081 | None:intergenic | 50.0% | |
| GCTAGAGATGATCCCTCTGT+TGG | - | chr8.2:36847343-36847362 | MS.gene062882:intron | 50.0% | |
| GGAACAGATGCGTTCTGTAG+TGG | - | chr8.2:36847989-36848008 | MS.gene062882:intron | 50.0% | |
| GGCGAATCTGCACCTGTAAT+AGG | + | chr8.2:36848608-36848627 | None:intergenic | 50.0% | |
| GGGCATGTTGAGGCAAGAAA+TGG | - | chr8.2:36847444-36847463 | MS.gene062882:intron | 50.0% | |
| GTCCGTCAAATTGTAAGGGC+CGG | - | chr8.2:36848250-36848269 | MS.gene062882:intron | 50.0% | |
| GTTCAACCGGTTGAACCGTA+TGG | + | chr8.2:36847746-36847765 | None:intergenic | 50.0% | |
| TGAGAACCCGAATTGCGGTT+GGG | + | chr8.2:36849597-36849616 | None:intergenic | 50.0% | |
| TGCCTTGAGAACCCGAATTG+CGG | + | chr8.2:36849602-36849621 | None:intergenic | 50.0% | |
| TGGAGAGGAAACAAGGTGGT+TGG | + | chr8.2:36846864-36846883 | None:intergenic | 50.0% | |
| TTGAGAACCCGAATTGCGGT+TGG | + | chr8.2:36849598-36849617 | None:intergenic | 50.0% | |
| ! | AACCGCAATTCGGGTTCTCA+AGG | - | chr8.2:36849597-36849616 | MS.gene062882:CDS | 50.0% |
| ! | AAGGTTGGGAGCTTTGATGC+TGG | - | chr8.2:36848960-36848979 | MS.gene062882:intron | 50.0% |
| ! | CGTTGGTGAAGGAATTGCCA+AGG | - | chr8.2:36847042-36847061 | MS.gene062882:intron | 50.0% |
| ! | GAAGCACCTTAGGACCAGTT+TGG | + | chr8.2:36848824-36848843 | None:intergenic | 50.0% |
| ! | GGGAGCTTTGATGCTGGTTA+TGG | - | chr8.2:36848966-36848985 | MS.gene062882:intron | 50.0% |
| CAAGCCTTGAGGACTCCAGA+TGG | - | chr8.2:36848019-36848038 | MS.gene062882:intron | 55.0% | |
| CAGGGTATGCTGTTGGAGGA+GGG | - | chr8.2:36848742-36848761 | MS.gene062882:intron | 55.0% | |
| CAGGTTGCAGGGTATGCTGT+TGG | - | chr8.2:36848735-36848754 | MS.gene062882:intron | 55.0% | |
| GTTGCAGGGTATGCTGTTGG+AGG | - | chr8.2:36848738-36848757 | MS.gene062882:intron | 55.0% | |
| ! | CATCTGGAGTCCTCAAGGCT+TGG | + | chr8.2:36848021-36848040 | None:intergenic | 55.0% |
| GCAGGGTATGCTGTTGGAGG+AGG | - | chr8.2:36848741-36848760 | MS.gene062882:intron | 60.0% | |
| ! | GTGGTGGTGACCAAGCCTTG+AGG | - | chr8.2:36848008-36848027 | MS.gene062882:intron | 60.0% |
| !! | GCAGTGGATGACGGGCACGC+TGG | - | chr8.2:36849631-36849650 | MS.gene062882:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 36846809 | 36849660 | 36846809 | ID=MS.gene062882 |
| chr8.2 | mRNA | 36846809 | 36849660 | 36846809 | ID=MS.gene062882.t1;Parent=MS.gene062882 |
| chr8.2 | exon | 36849406 | 36849660 | 36849406 | ID=MS.gene062882.t1.exon1;Parent=MS.gene062882.t1 |
| chr8.2 | CDS | 36849406 | 36849660 | 36849406 | ID=cds.MS.gene062882.t1;Parent=MS.gene062882.t1 |
| chr8.2 | exon | 36849082 | 36849204 | 36849082 | ID=MS.gene062882.t1.exon2;Parent=MS.gene062882.t1 |
| chr8.2 | CDS | 36849082 | 36849204 | 36849082 | ID=cds.MS.gene062882.t1;Parent=MS.gene062882.t1 |
| chr8.2 | exon | 36848379 | 36848480 | 36848379 | ID=MS.gene062882.t1.exon3;Parent=MS.gene062882.t1 |
| chr8.2 | CDS | 36848379 | 36848480 | 36848379 | ID=cds.MS.gene062882.t1;Parent=MS.gene062882.t1 |
| chr8.2 | exon | 36847816 | 36847854 | 36847816 | ID=MS.gene062882.t1.exon4;Parent=MS.gene062882.t1 |
| chr8.2 | CDS | 36847816 | 36847854 | 36847816 | ID=cds.MS.gene062882.t1;Parent=MS.gene062882.t1 |
| chr8.2 | exon | 36847633 | 36847731 | 36847633 | ID=MS.gene062882.t1.exon5;Parent=MS.gene062882.t1 |
| chr8.2 | CDS | 36847633 | 36847731 | 36847633 | ID=cds.MS.gene062882.t1;Parent=MS.gene062882.t1 |
| chr8.2 | exon | 36847459 | 36847506 | 36847459 | ID=MS.gene062882.t1.exon6;Parent=MS.gene062882.t1 |
| chr8.2 | CDS | 36847459 | 36847506 | 36847459 | ID=cds.MS.gene062882.t1;Parent=MS.gene062882.t1 |
| chr8.2 | exon | 36847261 | 36847356 | 36847261 | ID=MS.gene062882.t1.exon7;Parent=MS.gene062882.t1 |
| chr8.2 | CDS | 36847261 | 36847356 | 36847261 | ID=cds.MS.gene062882.t1;Parent=MS.gene062882.t1 |
| chr8.2 | exon | 36846809 | 36846931 | 36846809 | ID=MS.gene062882.t1.exon8;Parent=MS.gene062882.t1 |
| chr8.2 | CDS | 36846809 | 36846931 | 36846809 | ID=cds.MS.gene062882.t1;Parent=MS.gene062882.t1 |
| Gene Sequence |
| Protein sequence |
