Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64424.t1 | XP_013463538.1 | 99 | 210 | 2 | 0 | 1 | 210 | 1 | 210 | 5.30E-109 | 403.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64424.t1 | Q9ZRA4 | 76.4 | 208 | 48 | 1 | 3 | 209 | 1 | 208 | 9.6e-83 | 307.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64424.t1 | I3ST27 | 99.0 | 210 | 2 | 0 | 1 | 210 | 1 | 210 | 3.8e-109 | 403.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene64424 | 0.801371 | 9.29E-49 | -1.69E-46 |
| MS.gene049284 | MS.gene64424 | 0.800763 | 1.24E-48 | -1.69E-46 |
| MS.gene049297 | MS.gene64424 | 0.860134 | 2.55E-63 | -1.69E-46 |
| MS.gene049346 | MS.gene64424 | 0.850821 | 1.33E-60 | -1.69E-46 |
| MS.gene049351 | MS.gene64424 | 0.839776 | 1.29E-57 | -1.69E-46 |
| MS.gene049389 | MS.gene64424 | 0.817648 | 2.96E-52 | -1.69E-46 |
| MS.gene049491 | MS.gene64424 | 0.853779 | 1.91E-61 | -1.69E-46 |
| MS.gene049661 | MS.gene64424 | 0.825077 | 5.71E-54 | -1.69E-46 |
| MS.gene049662 | MS.gene64424 | 0.828494 | 8.72E-55 | -1.69E-46 |
| MS.gene049758 | MS.gene64424 | 0.893101 | 8.59E-75 | -1.69E-46 |
| MS.gene049910 | MS.gene64424 | 0.820048 | 8.43E-53 | -1.69E-46 |
| MS.gene049915 | MS.gene64424 | 0.801219 | 9.98E-49 | -1.69E-46 |
| MS.gene050076 | MS.gene64424 | 0.871237 | 7.96E-67 | -1.69E-46 |
| MS.gene050099 | MS.gene64424 | 0.883225 | 5.37E-71 | -1.69E-46 |
| MS.gene050128 | MS.gene64424 | 0.827909 | 1.21E-54 | -1.69E-46 |
| MS.gene050301 | MS.gene64424 | 0.903211 | 4.39E-79 | -1.69E-46 |
| MS.gene050330 | MS.gene64424 | -0.80225 | 6.13E-49 | -1.69E-46 |
| MS.gene050397 | MS.gene64424 | 0.852515 | 4.39E-61 | -1.69E-46 |
| MS.gene050404 | MS.gene64424 | 0.859202 | 4.87E-63 | -1.69E-46 |
| MS.gene050406 | MS.gene64424 | 0.859548 | 3.83E-63 | -1.69E-46 |
| MS.gene050432 | MS.gene64424 | 0.806484 | 8.04E-50 | -1.69E-46 |
| MS.gene050464 | MS.gene64424 | 0.843146 | 1.68E-58 | -1.69E-46 |
| MS.gene050529 | MS.gene64424 | 0.855413 | 6.42E-62 | -1.69E-46 |
| MS.gene050558 | MS.gene64424 | 0.838355 | 3.02E-57 | -1.69E-46 |
| MS.gene050642 | MS.gene64424 | 0.82115 | 4.71E-53 | -1.69E-46 |
| MS.gene050767 | MS.gene64424 | 0.808994 | 2.36E-50 | -1.69E-46 |
| MS.gene050770 | MS.gene64424 | 0.811214 | 7.83E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene64424 | 0.906135 | 2.05E-80 | -1.69E-46 |
| MS.gene051240 | MS.gene64424 | 0.814383 | 1.58E-51 | -1.69E-46 |
| MS.gene051242 | MS.gene64424 | 0.802716 | 4.92E-49 | -1.69E-46 |
| MS.gene051471 | MS.gene64424 | 0.904333 | 1.37E-79 | -1.69E-46 |
| MS.gene051582 | MS.gene64424 | 0.82923 | 5.78E-55 | -1.69E-46 |
| MS.gene051662 | MS.gene64424 | 0.896035 | 5.42E-76 | -1.69E-46 |
| MS.gene051663 | MS.gene64424 | 0.880697 | 4.43E-70 | -1.69E-46 |
| MS.gene051860 | MS.gene64424 | 0.826421 | 2.74E-54 | -1.69E-46 |
| MS.gene052078 | MS.gene64424 | 0.889981 | 1.49E-73 | -1.69E-46 |
| MS.gene052178 | MS.gene64424 | 0.881236 | 2.84E-70 | -1.69E-46 |
| MS.gene052188 | MS.gene64424 | 0.820613 | 6.25E-53 | -1.69E-46 |
| MS.gene052207 | MS.gene64424 | 0.821944 | 3.08E-53 | -1.69E-46 |
| MS.gene052253 | MS.gene64424 | 0.807905 | 4.02E-50 | -1.69E-46 |
| MS.gene052290 | MS.gene64424 | 0.817509 | 3.18E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene64424 | 0.861466 | 1.01E-63 | -1.69E-46 |
| MS.gene052326 | MS.gene64424 | 0.895901 | 6.17E-76 | -1.69E-46 |
| MS.gene052340 | MS.gene64424 | 0.845277 | 4.49E-59 | -1.69E-46 |
| MS.gene052344 | MS.gene64424 | -0.838694 | 2.47E-57 | -1.69E-46 |
| MS.gene052600 | MS.gene64424 | 0.837584 | 4.77E-57 | -1.69E-46 |
| MS.gene053181 | MS.gene64424 | 0.806187 | 9.29E-50 | -1.69E-46 |
| MS.gene053557 | MS.gene64424 | 0.86535 | 6.29E-65 | -1.69E-46 |
| MS.gene053836 | MS.gene64424 | 0.91902 | 7.58E-87 | -1.69E-46 |
| MS.gene053907 | MS.gene64424 | 0.866442 | 2.84E-65 | -1.69E-46 |
| MS.gene053928 | MS.gene64424 | 0.8121 | 5.03E-51 | -1.69E-46 |
| MS.gene053971 | MS.gene64424 | 0.873287 | 1.65E-67 | -1.69E-46 |
| MS.gene054011 | MS.gene64424 | 0.818155 | 2.27E-52 | -1.69E-46 |
| MS.gene054012 | MS.gene64424 | 0.802854 | 4.60E-49 | -1.69E-46 |
| MS.gene054013 | MS.gene64424 | 0.800123 | 1.67E-48 | -1.69E-46 |
| MS.gene054123 | MS.gene64424 | 0.841549 | 4.44E-58 | -1.69E-46 |
| MS.gene054214 | MS.gene64424 | 0.821708 | 3.50E-53 | -1.69E-46 |
| MS.gene054376 | MS.gene64424 | 0.843697 | 1.20E-58 | -1.69E-46 |
| MS.gene054473 | MS.gene64424 | 0.857304 | 1.79E-62 | -1.69E-46 |
| MS.gene05455 | MS.gene64424 | 0.865257 | 6.73E-65 | -1.69E-46 |
| MS.gene054618 | MS.gene64424 | 0.808143 | 3.58E-50 | -1.69E-46 |
| MS.gene054667 | MS.gene64424 | 0.813165 | 2.94E-51 | -1.69E-46 |
| MS.gene054802 | MS.gene64424 | 0.836223 | 1.06E-56 | -1.69E-46 |
| MS.gene054803 | MS.gene64424 | 0.837914 | 3.92E-57 | -1.69E-46 |
| MS.gene054804 | MS.gene64424 | 0.837838 | 4.10E-57 | -1.69E-46 |
| MS.gene054942 | MS.gene64424 | 0.860874 | 1.52E-63 | -1.69E-46 |
| MS.gene054983 | MS.gene64424 | 0.832653 | 8.36E-56 | -1.69E-46 |
| MS.gene055116 | MS.gene64424 | 0.823162 | 1.61E-53 | -1.69E-46 |
| MS.gene055254 | MS.gene64424 | 0.821176 | 4.64E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene64424 | 0.89517 | 1.24E-75 | -1.69E-46 |
| MS.gene055303 | MS.gene64424 | 0.809623 | 1.73E-50 | -1.69E-46 |
| MS.gene055390 | MS.gene64424 | 0.870875 | 1.05E-66 | -1.69E-46 |
| MS.gene055422 | MS.gene64424 | 0.921933 | 1.89E-88 | -1.69E-46 |
| MS.gene055428 | MS.gene64424 | 0.913619 | 4.99E-84 | -1.69E-46 |
| MS.gene055604 | MS.gene64424 | 0.828311 | 9.65E-55 | -1.69E-46 |
| MS.gene055712 | MS.gene64424 | 0.861882 | 7.50E-64 | -1.69E-46 |
| MS.gene055896 | MS.gene64424 | 0.828254 | 9.96E-55 | -1.69E-46 |
| MS.gene056069 | MS.gene64424 | -0.80445 | 2.15E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene64424 | 0.847032 | 1.49E-59 | -1.69E-46 |
| MS.gene056314 | MS.gene64424 | 0.812457 | 4.20E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene64424 | 0.826048 | 3.36E-54 | -1.69E-46 |
| MS.gene056451 | MS.gene64424 | 0.865137 | 7.34E-65 | -1.69E-46 |
| MS.gene056612 | MS.gene64424 | 0.900332 | 8.15E-78 | -1.69E-46 |
| MS.gene056772 | MS.gene64424 | 0.819122 | 1.37E-52 | -1.69E-46 |
| MS.gene056875 | MS.gene64424 | 0.803732 | 3.03E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene64424 | 0.885057 | 1.13E-71 | -1.69E-46 |
| MS.gene057121 | MS.gene64424 | 0.874562 | 6.13E-68 | -1.69E-46 |
| MS.gene057123 | MS.gene64424 | 0.82267 | 2.09E-53 | -1.69E-46 |
| MS.gene057245 | MS.gene64424 | 0.880426 | 5.54E-70 | -1.69E-46 |
| MS.gene057260 | MS.gene64424 | 0.811403 | 7.12E-51 | -1.69E-46 |
| MS.gene057295 | MS.gene64424 | 0.841042 | 6.04E-58 | -1.69E-46 |
| MS.gene05733 | MS.gene64424 | 0.867274 | 1.54E-65 | -1.69E-46 |
| MS.gene057439 | MS.gene64424 | 0.893076 | 8.80E-75 | -1.69E-46 |
| MS.gene057450 | MS.gene64424 | 0.804947 | 1.69E-49 | -1.69E-46 |
| MS.gene057754 | MS.gene64424 | 0.807557 | 4.77E-50 | -1.69E-46 |
| MS.gene057782 | MS.gene64424 | 0.811957 | 5.40E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene64424 | 0.896794 | 2.62E-76 | -1.69E-46 |
| MS.gene05811 | MS.gene64424 | 0.885431 | 8.18E-72 | -1.69E-46 |
| MS.gene058142 | MS.gene64424 | 0.840573 | 8.02E-58 | -1.69E-46 |
| MS.gene058201 | MS.gene64424 | 0.818468 | 1.93E-52 | -1.69E-46 |
| MS.gene058233 | MS.gene64424 | 0.865895 | 4.24E-65 | -1.69E-46 |
| MS.gene058276 | MS.gene64424 | 0.848984 | 4.33E-60 | -1.69E-46 |
| MS.gene058293 | MS.gene64424 | 0.843544 | 1.31E-58 | -1.69E-46 |
| MS.gene058660 | MS.gene64424 | 0.893673 | 5.05E-75 | -1.69E-46 |
| MS.gene058749 | MS.gene64424 | 0.823278 | 1.51E-53 | -1.69E-46 |
| MS.gene058787 | MS.gene64424 | 0.806729 | 7.14E-50 | -1.69E-46 |
| MS.gene058833 | MS.gene64424 | 0.80893 | 2.43E-50 | -1.69E-46 |
| MS.gene058845 | MS.gene64424 | 0.858666 | 7.04E-63 | -1.69E-46 |
| MS.gene05907 | MS.gene64424 | 0.882417 | 1.06E-70 | -1.69E-46 |
| MS.gene059228 | MS.gene64424 | 0.85495 | 8.75E-62 | -1.69E-46 |
| MS.gene059294 | MS.gene64424 | 0.803041 | 4.21E-49 | -1.69E-46 |
| MS.gene059326 | MS.gene64424 | 0.846314 | 2.35E-59 | -1.69E-46 |
| MS.gene059518 | MS.gene64424 | 0.882983 | 6.59E-71 | -1.69E-46 |
| MS.gene059597 | MS.gene64424 | 0.879843 | 8.95E-70 | -1.69E-46 |
| MS.gene05959 | MS.gene64424 | 0.80175 | 7.77E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene64424 | 0.828241 | 1.00E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene64424 | 0.826216 | 3.06E-54 | -1.69E-46 |
| MS.gene059692 | MS.gene64424 | 0.845978 | 2.90E-59 | -1.69E-46 |
| MS.gene059695 | MS.gene64424 | 0.844516 | 7.20E-59 | -1.69E-46 |
| MS.gene059708 | MS.gene64424 | 0.806096 | 9.71E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene64424 | 0.868457 | 6.44E-66 | -1.69E-46 |
| MS.gene059894 | MS.gene64424 | 0.905778 | 3.00E-80 | -1.69E-46 |
| MS.gene059899 | MS.gene64424 | 0.817674 | 2.92E-52 | -1.69E-46 |
| MS.gene059960 | MS.gene64424 | 0.800055 | 1.72E-48 | -1.69E-46 |
| MS.gene060005 | MS.gene64424 | 0.833982 | 3.90E-56 | -1.69E-46 |
| MS.gene06037 | MS.gene64424 | 0.878661 | 2.34E-69 | -1.69E-46 |
| MS.gene060407 | MS.gene64424 | 0.83252 | 9.02E-56 | -1.69E-46 |
| MS.gene060476 | MS.gene64424 | 0.880261 | 6.35E-70 | -1.69E-46 |
| MS.gene06090 | MS.gene64424 | 0.826197 | 3.10E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene64424 | 0.910297 | 2.19E-82 | -1.69E-46 |
| MS.gene061112 | MS.gene64424 | 0.857575 | 1.49E-62 | -1.69E-46 |
| MS.gene061113 | MS.gene64424 | 0.822889 | 1.86E-53 | -1.69E-46 |
| MS.gene061265 | MS.gene64424 | 0.851751 | 7.24E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64424.t1 | MTR_2g041550 | 99.048 | 210 | 2 | 0 | 1 | 210 | 1 | 210 | 3.49e-150 | 415 |
| MS.gene64424.t1 | MTR_2g041570 | 84.286 | 210 | 33 | 0 | 1 | 210 | 1 | 210 | 4.33e-126 | 354 |
| MS.gene64424.t1 | MTR_2g041580 | 83.810 | 210 | 34 | 0 | 1 | 210 | 1 | 210 | 5.45e-126 | 354 |
| MS.gene64424.t1 | MTR_8g020590 | 67.788 | 208 | 66 | 1 | 4 | 210 | 1 | 208 | 1.22e-93 | 272 |
| MS.gene64424.t1 | MTR_8g020630 | 56.459 | 209 | 87 | 3 | 4 | 210 | 3 | 209 | 8.80e-79 | 234 |
| MS.gene64424.t1 | MTR_8g020650 | 57.513 | 193 | 80 | 2 | 18 | 210 | 19 | 209 | 1.37e-76 | 229 |
| MS.gene64424.t1 | MTR_8g020670 | 55.502 | 209 | 89 | 3 | 4 | 210 | 3 | 209 | 5.03e-76 | 228 |
| MS.gene64424.t1 | MTR_8g020610 | 51.675 | 209 | 97 | 2 | 4 | 210 | 1 | 207 | 3.91e-71 | 215 |
| MS.gene64424.t1 | MTR_2g044040 | 50.239 | 209 | 100 | 3 | 4 | 210 | 3 | 209 | 5.65e-67 | 205 |
| MS.gene64424.t1 | MTR_2g045100 | 52.153 | 209 | 96 | 3 | 4 | 210 | 3 | 209 | 8.28e-67 | 204 |
| MS.gene64424.t1 | MTR_3g019710 | 50.239 | 209 | 100 | 3 | 4 | 210 | 3 | 209 | 1.16e-64 | 199 |
| MS.gene64424.t1 | MTR_2g036120 | 50.481 | 208 | 99 | 3 | 4 | 209 | 3 | 208 | 5.86e-63 | 194 |
| MS.gene64424.t1 | MTR_3g019650 | 49.519 | 208 | 102 | 3 | 4 | 210 | 3 | 208 | 6.69e-63 | 194 |
| MS.gene64424.t1 | MTR_3g019680 | 49.519 | 208 | 102 | 3 | 4 | 210 | 3 | 208 | 1.15e-62 | 194 |
| MS.gene64424.t1 | MTR_8g020750 | 47.418 | 213 | 108 | 3 | 1 | 210 | 1 | 212 | 9.25e-61 | 189 |
| MS.gene64424.t1 | MTR_8g020770 | 46.948 | 213 | 109 | 3 | 1 | 210 | 1 | 212 | 2.26e-60 | 188 |
| MS.gene64424.t1 | MTR_0284s0010 | 48.325 | 209 | 104 | 3 | 4 | 210 | 3 | 209 | 7.69e-60 | 186 |
| MS.gene64424.t1 | MTR_4g010340 | 49.038 | 208 | 103 | 3 | 3 | 210 | 1 | 205 | 2.95e-59 | 185 |
| MS.gene64424.t1 | MTR_5g031460 | 45.972 | 211 | 111 | 3 | 1 | 210 | 1 | 209 | 2.18e-58 | 183 |
| MS.gene64424.t1 | MTR_7g011340 | 48.969 | 194 | 97 | 2 | 17 | 210 | 18 | 209 | 1.24e-57 | 181 |
| MS.gene64424.t1 | MTR_3g073170 | 42.791 | 215 | 113 | 5 | 1 | 210 | 1 | 210 | 5.48e-55 | 174 |
| MS.gene64424.t1 | MTR_8g020760 | 44.860 | 214 | 111 | 4 | 1 | 210 | 1 | 211 | 3.25e-54 | 172 |
| MS.gene64424.t1 | MTR_2g019780 | 42.396 | 217 | 113 | 5 | 1 | 210 | 1 | 212 | 2.22e-52 | 167 |
| MS.gene64424.t1 | MTR_3g019810 | 45.366 | 205 | 102 | 4 | 4 | 206 | 109 | 305 | 3.12e-48 | 160 |
| MS.gene64424.t1 | MTR_8g020763 | 39.674 | 184 | 110 | 1 | 27 | 210 | 8 | 190 | 4.72e-47 | 153 |
| MS.gene64424.t1 | MTR_2g030855 | 44.022 | 184 | 95 | 3 | 20 | 201 | 25 | 202 | 8.47e-43 | 143 |
| MS.gene64424.t1 | MTR_4g017050 | 41.981 | 212 | 106 | 5 | 7 | 203 | 4 | 213 | 2.67e-42 | 142 |
| MS.gene64424.t1 | MTR_5g046410 | 41.981 | 212 | 106 | 5 | 7 | 203 | 4 | 213 | 2.88e-42 | 142 |
| MS.gene64424.t1 | MTR_5g046430 | 41.981 | 212 | 106 | 5 | 7 | 203 | 4 | 213 | 2.88e-42 | 142 |
| MS.gene64424.t1 | MTR_4g017030 | 41.981 | 212 | 106 | 5 | 7 | 203 | 4 | 213 | 2.88e-42 | 142 |
| MS.gene64424.t1 | MTR_2g031270 | 46.296 | 162 | 82 | 2 | 20 | 179 | 26 | 184 | 7.82e-42 | 140 |
| MS.gene64424.t1 | MTR_6g005310 | 41.589 | 214 | 110 | 5 | 3 | 203 | 1 | 212 | 1.06e-41 | 140 |
| MS.gene64424.t1 | MTR_6g005360 | 44.920 | 187 | 95 | 4 | 23 | 203 | 28 | 212 | 1.74e-41 | 140 |
| MS.gene64424.t1 | MTR_4g017040 | 44.149 | 188 | 96 | 4 | 23 | 203 | 28 | 213 | 3.97e-41 | 139 |
| MS.gene64424.t1 | MTR_6g005340 | 41.121 | 214 | 111 | 5 | 3 | 203 | 1 | 212 | 7.47e-41 | 138 |
| MS.gene64424.t1 | MTR_1g079490 | 42.381 | 210 | 105 | 5 | 9 | 203 | 6 | 214 | 9.08e-41 | 138 |
| MS.gene64424.t1 | MTR_2g019250 | 43.617 | 188 | 97 | 4 | 23 | 203 | 28 | 213 | 1.35e-40 | 138 |
| MS.gene64424.t1 | MTR_6g005330 | 44.385 | 187 | 96 | 4 | 23 | 203 | 28 | 212 | 1.97e-40 | 137 |
| MS.gene64424.t1 | MTR_1g023770 | 41.667 | 168 | 94 | 2 | 40 | 203 | 39 | 206 | 1.14e-38 | 132 |
| MS.gene64424.t1 | MTR_1g060120 | 39.896 | 193 | 108 | 2 | 21 | 206 | 30 | 221 | 3.04e-38 | 132 |
| MS.gene64424.t1 | MTR_1g085140 | 40.323 | 186 | 109 | 1 | 23 | 206 | 30 | 215 | 1.09e-37 | 130 |
| MS.gene64424.t1 | MTR_2g030895 | 41.420 | 169 | 94 | 3 | 40 | 203 | 7 | 175 | 1.12e-37 | 129 |
| MS.gene64424.t1 | MTR_1g112200 | 36.816 | 201 | 122 | 2 | 3 | 203 | 9 | 204 | 1.77e-37 | 129 |
| MS.gene64424.t1 | MTR_2g030865 | 41.420 | 169 | 94 | 3 | 40 | 203 | 7 | 175 | 3.37e-37 | 128 |
| MS.gene64424.t1 | MTR_7g111240 | 41.398 | 186 | 104 | 2 | 23 | 206 | 26 | 208 | 1.01e-36 | 127 |
| MS.gene64424.t1 | MTR_5g036570 | 37.566 | 189 | 115 | 2 | 23 | 208 | 33 | 221 | 1.39e-36 | 127 |
| MS.gene64424.t1 | MTR_7g111240 | 40.642 | 187 | 109 | 1 | 23 | 207 | 26 | 212 | 4.11e-36 | 126 |
| MS.gene64424.t1 | MTR_1g085500 | 35.922 | 206 | 121 | 4 | 3 | 203 | 12 | 211 | 9.85e-34 | 120 |
| MS.gene64424.t1 | MTR_6g005380 | 42.945 | 163 | 86 | 3 | 14 | 171 | 19 | 179 | 3.09e-33 | 119 |
| MS.gene64424.t1 | MTR_4g027415 | 48.031 | 127 | 64 | 2 | 17 | 143 | 18 | 142 | 2.01e-32 | 114 |
| MS.gene64424.t1 | MTR_2g072560 | 44.828 | 145 | 70 | 4 | 4 | 142 | 3 | 143 | 3.47e-31 | 111 |
| MS.gene64424.t1 | MTR_2g031300 | 51.887 | 106 | 49 | 1 | 40 | 143 | 7 | 112 | 1.54e-30 | 110 |
| MS.gene64424.t1 | MTR_8g007300 | 38.806 | 134 | 81 | 1 | 37 | 170 | 48 | 180 | 4.85e-29 | 108 |
| MS.gene64424.t1 | MTR_6g005350 | 37.634 | 186 | 109 | 4 | 23 | 203 | 28 | 211 | 1.53e-28 | 107 |
| MS.gene64424.t1 | MTR_3g096330 | 35.638 | 188 | 106 | 4 | 1 | 175 | 551 | 736 | 4.97e-28 | 111 |
| MS.gene64424.t1 | MTR_3g019610 | 48.571 | 105 | 51 | 2 | 4 | 106 | 3 | 106 | 2.14e-26 | 98.2 |
| MS.gene64424.t1 | MTR_2g086630 | 33.659 | 205 | 122 | 5 | 2 | 203 | 8 | 201 | 1.63e-24 | 96.3 |
| MS.gene64424.t1 | MTR_2g086620 | 33.659 | 205 | 122 | 5 | 2 | 203 | 8 | 201 | 1.73e-24 | 96.3 |
| MS.gene64424.t1 | MTR_2g086640 | 32.057 | 209 | 120 | 5 | 2 | 203 | 7 | 200 | 8.77e-23 | 91.7 |
| MS.gene64424.t1 | MTR_4g052770 | 36.434 | 129 | 81 | 1 | 76 | 203 | 74 | 202 | 2.18e-20 | 85.5 |
| MS.gene64424.t1 | MTR_4g052780 | 35.659 | 129 | 82 | 1 | 76 | 203 | 74 | 202 | 7.51e-20 | 84.0 |
| MS.gene64424.t1 | MTR_2g096110 | 29.457 | 129 | 75 | 2 | 43 | 170 | 6 | 119 | 5.70e-13 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64424.t1 | AT5G20630 | 74.762 | 210 | 52 | 1 | 1 | 209 | 1 | 210 | 1.86e-109 | 312 |
| MS.gene64424.t1 | AT1G72610 | 66.346 | 208 | 70 | 0 | 3 | 210 | 1 | 208 | 4.08e-91 | 266 |
| MS.gene64424.t1 | AT3G04200 | 44.503 | 191 | 100 | 3 | 23 | 207 | 33 | 223 | 3.38e-42 | 142 |
| MS.gene64424.t1 | AT5G39160 | 43.684 | 190 | 99 | 3 | 23 | 207 | 30 | 216 | 8.54e-42 | 141 |
| MS.gene64424.t1 | AT5G39190 | 43.455 | 191 | 102 | 3 | 23 | 207 | 30 | 220 | 7.42e-41 | 139 |
| MS.gene64424.t1 | AT5G39160 | 43.455 | 191 | 102 | 3 | 23 | 207 | 30 | 220 | 8.82e-41 | 138 |
| MS.gene64424.t1 | AT5G39110 | 44.149 | 188 | 98 | 3 | 23 | 203 | 30 | 217 | 2.11e-40 | 137 |
| MS.gene64424.t1 | AT3G62020 | 38.537 | 205 | 116 | 3 | 9 | 203 | 8 | 212 | 2.23e-40 | 137 |
| MS.gene64424.t1 | AT5G39130 | 43.455 | 191 | 102 | 3 | 23 | 207 | 30 | 220 | 2.33e-40 | 137 |
| MS.gene64424.t1 | AT1G02335 | 36.493 | 211 | 130 | 2 | 1 | 207 | 6 | 216 | 8.26e-40 | 136 |
| MS.gene64424.t1 | AT3G05950 | 40.654 | 214 | 116 | 4 | 1 | 203 | 5 | 218 | 1.15e-39 | 135 |
| MS.gene64424.t1 | AT5G61750 | 41.436 | 181 | 90 | 3 | 1 | 171 | 1 | 175 | 6.71e-39 | 133 |
| MS.gene64424.t1 | AT1G09560 | 46.951 | 164 | 83 | 2 | 23 | 184 | 30 | 191 | 4.04e-38 | 131 |
| MS.gene64424.t1 | AT5G38960 | 43.878 | 196 | 95 | 6 | 23 | 207 | 32 | 223 | 4.60e-38 | 131 |
| MS.gene64424.t1 | AT5G39120 | 40.092 | 217 | 115 | 5 | 3 | 204 | 1 | 217 | 5.29e-38 | 131 |
| MS.gene64424.t1 | AT1G18980 | 39.409 | 203 | 119 | 2 | 3 | 203 | 15 | 215 | 5.50e-38 | 131 |
| MS.gene64424.t1 | AT5G26700 | 36.816 | 201 | 125 | 2 | 3 | 203 | 8 | 206 | 9.57e-38 | 130 |
| MS.gene64424.t1 | AT3G62020 | 40.000 | 170 | 99 | 2 | 37 | 203 | 14 | 183 | 2.13e-37 | 129 |
| MS.gene64424.t1 | AT5G39150 | 42.328 | 189 | 102 | 3 | 23 | 204 | 29 | 217 | 3.26e-37 | 129 |
| MS.gene64424.t1 | AT1G18970 | 40.102 | 197 | 114 | 2 | 9 | 203 | 21 | 215 | 3.43e-37 | 129 |
| MS.gene64424.t1 | AT5G39180 | 42.328 | 189 | 102 | 3 | 23 | 204 | 29 | 217 | 4.70e-37 | 129 |
| MS.gene64424.t1 | AT3G04150 | 39.899 | 198 | 105 | 4 | 23 | 210 | 32 | 225 | 9.72e-37 | 128 |
| MS.gene64424.t1 | AT4G14630 | 41.667 | 192 | 97 | 4 | 23 | 203 | 32 | 219 | 1.00e-36 | 128 |
| MS.gene64424.t1 | AT5G38940 | 47.712 | 153 | 76 | 2 | 23 | 171 | 32 | 184 | 1.67e-36 | 127 |
| MS.gene64424.t1 | AT5G38940 | 47.712 | 153 | 76 | 2 | 23 | 171 | 56 | 208 | 2.63e-36 | 127 |
| MS.gene64424.t1 | AT3G04150 | 40.782 | 179 | 101 | 2 | 37 | 210 | 60 | 238 | 3.23e-36 | 127 |
| MS.gene64424.t1 | AT3G05930 | 43.316 | 187 | 99 | 4 | 23 | 204 | 29 | 213 | 4.70e-36 | 126 |
| MS.gene64424.t1 | AT5G38930 | 47.059 | 153 | 77 | 2 | 23 | 171 | 32 | 184 | 2.62e-35 | 124 |
| MS.gene64424.t1 | AT5G38910 | 45.856 | 181 | 82 | 4 | 14 | 182 | 17 | 193 | 6.49e-35 | 123 |
| MS.gene64424.t1 | AT3G10080 | 39.884 | 173 | 98 | 2 | 21 | 188 | 30 | 201 | 1.02e-34 | 123 |
| MS.gene64424.t1 | AT3G04190 | 44.512 | 164 | 85 | 3 | 23 | 181 | 32 | 194 | 1.20e-34 | 122 |
| MS.gene64424.t1 | AT3G04170 | 41.451 | 193 | 98 | 6 | 23 | 206 | 32 | 218 | 3.57e-34 | 121 |
| MS.gene64424.t1 | AT3G10080 | 39.884 | 173 | 98 | 2 | 21 | 188 | 101 | 272 | 4.28e-34 | 123 |
| MS.gene64424.t1 | AT5G39190 | 44.304 | 158 | 83 | 2 | 55 | 207 | 41 | 198 | 4.60e-34 | 120 |
| MS.gene64424.t1 | AT5G39160 | 44.304 | 158 | 83 | 2 | 55 | 207 | 41 | 198 | 5.29e-34 | 120 |
| MS.gene64424.t1 | AT3G04180 | 40.314 | 191 | 106 | 4 | 23 | 206 | 32 | 221 | 6.60e-33 | 118 |
| MS.gene64424.t1 | AT1G10460 | 38.202 | 178 | 102 | 4 | 37 | 208 | 42 | 217 | 1.51e-32 | 117 |
| MS.gene64424.t1 | AT1G74820 | 35.897 | 195 | 121 | 2 | 11 | 203 | 30 | 222 | 2.09e-29 | 109 |
| MS.gene64424.t1 | AT5G38910 | 34.637 | 179 | 68 | 4 | 14 | 182 | 17 | 156 | 8.07e-15 | 70.1 |
Find 50 sgRNAs with CRISPR-Local
Find 59 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAACCACCACTGTTAATT+TGG | 0.158930 | 2.4:+48613243 | None:intergenic |
| TAACCCTGGTTTACAGATAT+TGG | 0.318535 | 2.4:-48613189 | MS.gene64424:CDS |
| AAGAAGCTTAAGGGTGTTCT+TGG | 0.328993 | 2.4:-48613092 | MS.gene64424:CDS |
| GAATATCCGGCGGGGCCATT+TGG | 0.367744 | 2.4:+48613596 | None:intergenic |
| ACTTTACAAAGGTGATGTTA+TGG | 0.394160 | 2.4:-48613291 | MS.gene64424:CDS |
| TCACACTCACCCCGGTGCTT+CGG | 0.412458 | 2.4:-48613387 | MS.gene64424:CDS |
| GCGCAATTTGCCGGTTTAAA+CGG | 0.412670 | 2.4:-48613464 | MS.gene64424:CDS |
| GCATTCGACGCGCAATTTGC+CGG | 0.427362 | 2.4:-48613473 | MS.gene64424:CDS |
| CCCCGGTGCTTCGGAGGTGT+TGG | 0.428887 | 2.4:-48613378 | MS.gene64424:CDS |
| TTTGCCGGTTTAAACGGTCT+TGG | 0.436173 | 2.4:-48613458 | MS.gene64424:CDS |
| CTCGCGCGTTTAGATTTAGC+TGG | 0.448675 | 2.4:-48613428 | MS.gene64424:CDS |
| CGTTTAGATTTAGCTGGAGG+TGG | 0.457705 | 2.4:-48613422 | MS.gene64424:CDS |
| AGGTGTTTCCTGCTGTGGCT+AGG | 0.459036 | 2.4:+48613525 | None:intergenic |
| GGCTGCTTTGATAATGTTTG+AGG | 0.464752 | 2.4:+48613505 | None:intergenic |
| CTACTACTGATGCATGAGAA+AGG | 0.465818 | 2.4:+48613645 | None:intergenic |
| AAGGGTGTTCTTGGAGGAAG+TGG | 0.467256 | 2.4:-48613083 | MS.gene64424:CDS |
| AATTCCAAGACCGTTTAAAC+CGG | 0.473337 | 2.4:+48613454 | None:intergenic |
| GAGGTGTTGGTTGTTATTCA+AGG | 0.473998 | 2.4:-48613365 | MS.gene64424:CDS |
| AACCAACACCTCCGAAGCAC+CGG | 0.476326 | 2.4:+48613376 | None:intergenic |
| AAGCTTAAGGGTGTTCTTGG+AGG | 0.485352 | 2.4:-48613089 | MS.gene64424:CDS |
| CACTCACCCCGGTGCTTCGG+AGG | 0.485416 | 2.4:-48613384 | MS.gene64424:CDS |
| ATTCAAGGAACAATCTGTGC+TGG | 0.486403 | 2.4:-48613350 | MS.gene64424:CDS |
| GCAGATTACAATTTACCAAA+TGG | 0.490944 | 2.4:-48613611 | MS.gene64424:CDS |
| TGCTGTAGTGAAGAAGCTTA+AGG | 0.492145 | 2.4:-48613102 | MS.gene64424:CDS |
| GCAAATTGCGCGTCGAATGC+AGG | 0.494231 | 2.4:+48613476 | None:intergenic |
| TACTACTGATGCATGAGAAA+GGG | 0.497924 | 2.4:+48613646 | None:intergenic |
| GTTTGAGGTGTTTCCTGCTG+TGG | 0.499044 | 2.4:+48613520 | None:intergenic |
| GCTGTAGTGAAGAAGCTTAA+GGG | 0.505860 | 2.4:-48613101 | MS.gene64424:CDS |
| TTCCTGCTGTGGCTAGGCCA+TGG | 0.513942 | 2.4:+48613531 | None:intergenic |
| ACCAACACCTCCGAAGCACC+GGG | 0.518291 | 2.4:+48613377 | None:intergenic |
| TACCATGGCCTAGCCACAGC+AGG | 0.522604 | 2.4:-48613533 | MS.gene64424:CDS |
| AGCTAAATCTAAACGCGCGA+GGG | 0.530491 | 2.4:+48613430 | None:intergenic |
| CATTTCCAAATTAACAGTGG+TGG | 0.533371 | 2.4:-48613248 | MS.gene64424:CDS |
| CGCGTCGAATGCAGGTGTCA+CGG | 0.538639 | 2.4:+48613484 | None:intergenic |
| AATGTAAACAGTGTTGGCTG+AGG | 0.543013 | 2.4:+48613319 | None:intergenic |
| GTTGCAGTAATCAACTCAGT+TGG | 0.549809 | 2.4:+48613140 | None:intergenic |
| AATTTACCAAATGGCCCCGC+CGG | 0.556510 | 2.4:-48613602 | MS.gene64424:CDS |
| AAATCCAATATCTGTAAACC+AGG | 0.562055 | 2.4:+48613185 | None:intergenic |
| TACATTAAAACACTTTACAA+AGG | 0.570770 | 2.4:-48613302 | MS.gene64424:CDS |
| TGCTGTGGCTAGGCCATGGT+AGG | 0.572036 | 2.4:+48613535 | None:intergenic |
| AGCTTTAGTAGTGCTAACCC+TGG | 0.575691 | 2.4:-48613203 | MS.gene64424:CDS |
| GCGCGTTTAGATTTAGCTGG+AGG | 0.575819 | 2.4:-48613425 | MS.gene64424:CDS |
| GAAAATGACTTCGCCTACCA+TGG | 0.576506 | 2.4:-48613548 | MS.gene64424:CDS |
| GCACCGGGGTGAGTGTGAAG+TGG | 0.596047 | 2.4:+48613392 | None:intergenic |
| TGGAAATGCAACAATCCTTG+TGG | 0.601071 | 2.4:+48613263 | None:intergenic |
| CAGCTAAATCTAAACGCGCG+AGG | 0.614597 | 2.4:+48613429 | None:intergenic |
| TTGCATTTCCAAATTAACAG+TGG | 0.626633 | 2.4:-48613251 | MS.gene64424:CDS |
| ATTCCACTTCACACTCACCC+CGG | 0.645296 | 2.4:-48613395 | MS.gene64424:CDS |
| AATCCAATATCTGTAAACCA+GGG | 0.697449 | 2.4:+48613186 | None:intergenic |
| CCAACACCTCCGAAGCACCG+GGG | 0.770530 | 2.4:+48613378 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACATTAAAACACTTTACAA+AGG | - | chr2.4:48613466-48613485 | MS.gene64424:CDS | 20.0% |
| !!! | TGTTTTAATGTAAACAGTGT+TGG | + | chr2.4:48613458-48613477 | None:intergenic | 25.0% |
| AAATCCAATATCTGTAAACC+AGG | + | chr2.4:48613586-48613605 | None:intergenic | 30.0% | |
| AATCCAATATCTGTAAACCA+GGG | + | chr2.4:48613585-48613604 | None:intergenic | 30.0% | |
| ACTTTACAAAGGTGATGTTA+TGG | - | chr2.4:48613477-48613496 | MS.gene64424:CDS | 30.0% | |
| GCAGATTACAATTTACCAAA+TGG | - | chr2.4:48613157-48613176 | MS.gene64424:CDS | 30.0% | |
| GGAAAGAAGAGAAAAAATGA+AGG | + | chr2.4:48613104-48613123 | None:intergenic | 30.0% | |
| TTGCATTTCCAAATTAACAG+TGG | - | chr2.4:48613517-48613536 | MS.gene64424:CDS | 30.0% | |
| !!! | TCATTTTCGGTTACTTTTGA+TGG | + | chr2.4:48613208-48613227 | None:intergenic | 30.0% |
| AATTCCAAGACCGTTTAAAC+CGG | + | chr2.4:48613317-48613336 | None:intergenic | 35.0% | |
| CATTTCCAAATTAACAGTGG+TGG | - | chr2.4:48613520-48613539 | MS.gene64424:CDS | 35.0% | |
| TAACCCTGGTTTACAGATAT+TGG | - | chr2.4:48613579-48613598 | MS.gene64424:CDS | 35.0% | |
| TACTACTGATGCATGAGAAA+GGG | + | chr2.4:48613125-48613144 | None:intergenic | 35.0% | |
| TAGAACCACCACTGTTAATT+TGG | + | chr2.4:48613528-48613547 | None:intergenic | 35.0% | |
| ! | GATGTTATGGTTTTTCCACA+AGG | - | chr2.4:48613490-48613509 | MS.gene64424:CDS | 35.0% |
| ! | TGGTGTTTTGCAAGAATATC+CGG | + | chr2.4:48613188-48613207 | None:intergenic | 35.0% |
| ATTCAAGGAACAATCTGTGC+TGG | - | chr2.4:48613418-48613437 | MS.gene64424:CDS | 40.0% | |
| CTACTACTGATGCATGAGAA+AGG | + | chr2.4:48613126-48613145 | None:intergenic | 40.0% | |
| GCTGTAGTGAAGAAGCTTAA+GGG | - | chr2.4:48613667-48613686 | MS.gene64424:CDS | 40.0% | |
| GTTGCAGTAATCAACTCAGT+TGG | + | chr2.4:48613631-48613650 | None:intergenic | 40.0% | |
| TGCTGTAGTGAAGAAGCTTA+AGG | - | chr2.4:48613666-48613685 | MS.gene64424:CDS | 40.0% | |
| TGGAAATGCAACAATCCTTG+TGG | + | chr2.4:48613508-48613527 | None:intergenic | 40.0% | |
| ! | TGTTTTGCAAGAATATCCGG+CGG | + | chr2.4:48613185-48613204 | None:intergenic | 40.0% |
| !! | AAGAAGCTTAAGGGTGTTCT+TGG | - | chr2.4:48613676-48613695 | MS.gene64424:CDS | 40.0% |
| !! | AATGTAAACAGTGTTGGCTG+AGG | + | chr2.4:48613452-48613471 | None:intergenic | 40.0% |
| !! | ATGGTAGGCGAAGTCATTTT+CGG | + | chr2.4:48613221-48613240 | None:intergenic | 40.0% |
| !! | GAGGTGTTGGTTGTTATTCA+AGG | - | chr2.4:48613403-48613422 | MS.gene64424:CDS | 40.0% |
| !! | GGCTGCTTTGATAATGTTTG+AGG | + | chr2.4:48613266-48613285 | None:intergenic | 40.0% |
| AGCTAAATCTAAACGCGCGA+GGG | + | chr2.4:48613341-48613360 | None:intergenic | 45.0% | |
| CGTTTAGATTTAGCTGGAGG+TGG | - | chr2.4:48613346-48613365 | MS.gene64424:CDS | 45.0% | |
| GAAAATGACTTCGCCTACCA+TGG | - | chr2.4:48613220-48613239 | MS.gene64424:CDS | 45.0% | |
| ! | AGCTTTAGTAGTGCTAACCC+TGG | - | chr2.4:48613565-48613584 | MS.gene64424:CDS | 45.0% |
| ! | GTTTTGCAAGAATATCCGGC+GGG | + | chr2.4:48613184-48613203 | None:intergenic | 45.0% |
| ! | TTTTGCAAGAATATCCGGCG+GGG | + | chr2.4:48613183-48613202 | None:intergenic | 45.0% |
| !! | AAGCTTAAGGGTGTTCTTGG+AGG | - | chr2.4:48613679-48613698 | MS.gene64424:CDS | 45.0% |
| !! | GCGCAATTTGCCGGTTTAAA+CGG | - | chr2.4:48613304-48613323 | MS.gene64424:CDS | 45.0% |
| !! | TTTGCCGGTTTAAACGGTCT+TGG | - | chr2.4:48613310-48613329 | MS.gene64424:CDS | 45.0% |
| AATTTACCAAATGGCCCCGC+CGG | - | chr2.4:48613166-48613185 | MS.gene64424:CDS | 50.0% | |
| ATTCCACTTCACACTCACCC+CGG | - | chr2.4:48613373-48613392 | MS.gene64424:CDS | 50.0% | |
| CAGCTAAATCTAAACGCGCG+AGG | + | chr2.4:48613342-48613361 | None:intergenic | 50.0% | |
| CTCGCGCGTTTAGATTTAGC+TGG | - | chr2.4:48613340-48613359 | MS.gene64424:CDS | 50.0% | |
| GCGCGTTTAGATTTAGCTGG+AGG | - | chr2.4:48613343-48613362 | MS.gene64424:CDS | 50.0% | |
| ! | GTTTGAGGTGTTTCCTGCTG+TGG | + | chr2.4:48613251-48613270 | None:intergenic | 50.0% |
| !! | AAGGGTGTTCTTGGAGGAAG+TGG | - | chr2.4:48613685-48613704 | MS.gene64424:CDS | 50.0% |
| AACCAACACCTCCGAAGCAC+CGG | + | chr2.4:48613395-48613414 | None:intergenic | 55.0% | |
| AGGTGTTTCCTGCTGTGGCT+AGG | + | chr2.4:48613246-48613265 | None:intergenic | 55.0% | |
| GCAAATTGCGCGTCGAATGC+AGG | + | chr2.4:48613295-48613314 | None:intergenic | 55.0% | |
| GCATTCGACGCGCAATTTGC+CGG | - | chr2.4:48613295-48613314 | MS.gene64424:CDS | 55.0% | |
| CGCGTCGAATGCAGGTGTCA+CGG | + | chr2.4:48613287-48613306 | None:intergenic | 60.0% | |
| GAATATCCGGCGGGGCCATT+TGG | + | chr2.4:48613175-48613194 | None:intergenic | 60.0% | |
| TACCATGGCCTAGCCACAGC+AGG | - | chr2.4:48613235-48613254 | MS.gene64424:CDS | 60.0% | |
| TCACACTCACCCCGGTGCTT+CGG | - | chr2.4:48613381-48613400 | MS.gene64424:CDS | 60.0% | |
| TGCTGTGGCTAGGCCATGGT+AGG | + | chr2.4:48613236-48613255 | None:intergenic | 60.0% | |
| TTCCTGCTGTGGCTAGGCCA+TGG | + | chr2.4:48613240-48613259 | None:intergenic | 60.0% | |
| ! | ACCAACACCTCCGAAGCACC+GGG | + | chr2.4:48613394-48613413 | None:intergenic | 60.0% |
| GCACCGGGGTGAGTGTGAAG+TGG | + | chr2.4:48613379-48613398 | None:intergenic | 65.0% | |
| !! | CCAACACCTCCGAAGCACCG+GGG | + | chr2.4:48613393-48613412 | None:intergenic | 65.0% |
| CACTCACCCCGGTGCTTCGG+AGG | - | chr2.4:48613384-48613403 | MS.gene64424:CDS | 70.0% | |
| ! | CCCCGGTGCTTCGGAGGTGT+TGG | - | chr2.4:48613390-48613409 | MS.gene64424:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 48613079 | 48613711 | 48613079 | ID=MS.gene64424 |
| chr2.4 | mRNA | 48613079 | 48613711 | 48613079 | ID=MS.gene64424.t1;Parent=MS.gene64424 |
| chr2.4 | exon | 48613079 | 48613711 | 48613079 | ID=MS.gene64424.t1.exon1;Parent=MS.gene64424.t1 |
| chr2.4 | CDS | 48613079 | 48613711 | 48613079 | ID=cds.MS.gene64424.t1;Parent=MS.gene64424.t1 |
| Gene Sequence |
| Protein sequence |
