Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79342.t1 | XP_003599052.1 | 91.5 | 236 | 16 | 2 | 1 | 233 | 1 | 235 | 9.40E-107 | 396.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79342.t1 | Q8VYM4 | 67.8 | 202 | 59 | 3 | 38 | 233 | 52 | 253 | 9.7e-68 | 258.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79342.t1 | G7J1T1 | 91.5 | 236 | 16 | 2 | 1 | 233 | 1 | 235 | 6.8e-107 | 396.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049284 | MS.gene79342 | 0.816643 | 4.97E-52 | -1.69E-46 |
| MS.gene049351 | MS.gene79342 | 0.87947 | 1.21E-69 | -1.69E-46 |
| MS.gene049389 | MS.gene79342 | 0.846793 | 1.74E-59 | -1.69E-46 |
| MS.gene049427 | MS.gene79342 | 0.834137 | 3.57E-56 | -1.69E-46 |
| MS.gene049491 | MS.gene79342 | 0.86514 | 7.33E-65 | -1.69E-46 |
| MS.gene049614 | MS.gene79342 | 0.840695 | 7.45E-58 | -1.69E-46 |
| MS.gene049661 | MS.gene79342 | 0.82119 | 4.61E-53 | -1.69E-46 |
| MS.gene049662 | MS.gene79342 | 0.827561 | 1.46E-54 | -1.69E-46 |
| MS.gene049758 | MS.gene79342 | 0.895983 | 5.70E-76 | -1.69E-46 |
| MS.gene049760 | MS.gene79342 | 0.813016 | 3.17E-51 | -1.69E-46 |
| MS.gene049910 | MS.gene79342 | 0.802624 | 5.14E-49 | -1.69E-46 |
| MS.gene050076 | MS.gene79342 | 0.869725 | 2.50E-66 | -1.69E-46 |
| MS.gene050099 | MS.gene79342 | 0.875508 | 2.92E-68 | -1.69E-46 |
| MS.gene050128 | MS.gene79342 | 0.847832 | 9.01E-60 | -1.69E-46 |
| MS.gene050301 | MS.gene79342 | 0.908672 | 1.32E-81 | -1.69E-46 |
| MS.gene050397 | MS.gene79342 | 0.867667 | 1.16E-65 | -1.69E-46 |
| MS.gene050432 | MS.gene79342 | 0.867106 | 1.75E-65 | -1.69E-46 |
| MS.gene050464 | MS.gene79342 | 0.828146 | 1.06E-54 | -1.69E-46 |
| MS.gene050529 | MS.gene79342 | 0.860965 | 1.43E-63 | -1.69E-46 |
| MS.gene05053 | MS.gene79342 | 0.804208 | 2.41E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene79342 | 0.802566 | 5.28E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene79342 | 0.832499 | 9.13E-56 | -1.69E-46 |
| MS.gene050767 | MS.gene79342 | 0.860837 | 1.56E-63 | -1.69E-46 |
| MS.gene050770 | MS.gene79342 | 0.864499 | 1.16E-64 | -1.69E-46 |
| MS.gene050812 | MS.gene79342 | 0.831795 | 1.36E-55 | -1.69E-46 |
| MS.gene05101 | MS.gene79342 | 0.892703 | 1.24E-74 | -1.69E-46 |
| MS.gene05105 | MS.gene79342 | 0.807915 | 4.00E-50 | -1.69E-46 |
| MS.gene051255 | MS.gene79342 | 0.805401 | 1.36E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene79342 | 0.828432 | 9.02E-55 | -1.69E-46 |
| MS.gene051471 | MS.gene79342 | 0.888673 | 4.79E-73 | -1.69E-46 |
| MS.gene051582 | MS.gene79342 | 0.829852 | 4.08E-55 | -1.69E-46 |
| MS.gene051662 | MS.gene79342 | 0.820678 | 6.04E-53 | -1.69E-46 |
| MS.gene051663 | MS.gene79342 | 0.83908 | 1.96E-57 | -1.69E-46 |
| MS.gene051666 | MS.gene79342 | 0.801877 | 7.32E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene79342 | 0.815707 | 8.05E-52 | -1.69E-46 |
| MS.gene051877 | MS.gene79342 | 0.824822 | 6.55E-54 | -1.69E-46 |
| MS.gene052078 | MS.gene79342 | 0.890657 | 8.08E-74 | -1.69E-46 |
| MS.gene052178 | MS.gene79342 | 0.869633 | 2.67E-66 | -1.69E-46 |
| MS.gene052188 | MS.gene79342 | 0.858187 | 9.79E-63 | -1.69E-46 |
| MS.gene052207 | MS.gene79342 | 0.82385 | 1.11E-53 | -1.69E-46 |
| MS.gene052253 | MS.gene79342 | 0.806125 | 9.58E-50 | -1.69E-46 |
| MS.gene052287 | MS.gene79342 | 0.810633 | 1.05E-50 | -1.69E-46 |
| MS.gene052290 | MS.gene79342 | 0.847789 | 9.26E-60 | -1.69E-46 |
| MS.gene052310 | MS.gene79342 | 0.881797 | 1.78E-70 | -1.69E-46 |
| MS.gene052322 | MS.gene79342 | 0.803921 | 2.77E-49 | -1.69E-46 |
| MS.gene052326 | MS.gene79342 | 0.891992 | 2.39E-74 | -1.69E-46 |
| MS.gene052340 | MS.gene79342 | 0.863602 | 2.21E-64 | -1.69E-46 |
| MS.gene052344 | MS.gene79342 | -0.807002 | 6.25E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene79342 | 0.826454 | 2.69E-54 | -1.69E-46 |
| MS.gene052484 | MS.gene79342 | 0.809725 | 1.64E-50 | -1.69E-46 |
| MS.gene052485 | MS.gene79342 | 0.841714 | 4.02E-58 | -1.69E-46 |
| MS.gene052508 | MS.gene79342 | 0.806283 | 8.87E-50 | -1.69E-46 |
| MS.gene053103 | MS.gene79342 | 0.833371 | 5.54E-56 | -1.69E-46 |
| MS.gene053104 | MS.gene79342 | 0.831098 | 2.02E-55 | -1.69E-46 |
| MS.gene053107 | MS.gene79342 | 0.845247 | 4.58E-59 | -1.69E-46 |
| MS.gene053209 | MS.gene79342 | 0.86971 | 2.52E-66 | -1.69E-46 |
| MS.gene053322 | MS.gene79342 | 0.86885 | 4.80E-66 | -1.69E-46 |
| MS.gene053384 | MS.gene79342 | 0.818753 | 1.66E-52 | -1.69E-46 |
| MS.gene053557 | MS.gene79342 | 0.87134 | 7.36E-67 | -1.69E-46 |
| MS.gene053836 | MS.gene79342 | 0.881713 | 1.91E-70 | -1.69E-46 |
| MS.gene053907 | MS.gene79342 | 0.824924 | 6.20E-54 | -1.69E-46 |
| MS.gene053928 | MS.gene79342 | 0.809146 | 2.19E-50 | -1.69E-46 |
| MS.gene053971 | MS.gene79342 | 0.813898 | 2.03E-51 | -1.69E-46 |
| MS.gene054011 | MS.gene79342 | 0.804639 | 1.96E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene79342 | 0.861057 | 1.34E-63 | -1.69E-46 |
| MS.gene054376 | MS.gene79342 | 0.865994 | 3.94E-65 | -1.69E-46 |
| MS.gene054473 | MS.gene79342 | 0.811845 | 5.71E-51 | -1.69E-46 |
| MS.gene05455 | MS.gene79342 | 0.879664 | 1.04E-69 | -1.69E-46 |
| MS.gene054802 | MS.gene79342 | 0.86424 | 1.40E-64 | -1.69E-46 |
| MS.gene054803 | MS.gene79342 | 0.864399 | 1.25E-64 | -1.69E-46 |
| MS.gene054804 | MS.gene79342 | 0.863315 | 2.72E-64 | -1.69E-46 |
| MS.gene054955 | MS.gene79342 | 0.824326 | 8.58E-54 | -1.69E-46 |
| MS.gene055116 | MS.gene79342 | 0.824633 | 7.26E-54 | -1.69E-46 |
| MS.gene055254 | MS.gene79342 | 0.826265 | 2.98E-54 | -1.69E-46 |
| MS.gene055277 | MS.gene79342 | 0.918152 | 2.22E-86 | -1.69E-46 |
| MS.gene055390 | MS.gene79342 | 0.900562 | 6.47E-78 | -1.69E-46 |
| MS.gene055397 | MS.gene79342 | 0.827488 | 1.52E-54 | -1.69E-46 |
| MS.gene055412 | MS.gene79342 | 0.833199 | 6.12E-56 | -1.69E-46 |
| MS.gene055422 | MS.gene79342 | 0.905438 | 4.29E-80 | -1.69E-46 |
| MS.gene055428 | MS.gene79342 | 0.873213 | 1.75E-67 | -1.69E-46 |
| MS.gene055499 | MS.gene79342 | 0.817014 | 4.11E-52 | -1.69E-46 |
| MS.gene05553 | MS.gene79342 | 0.814077 | 1.85E-51 | -1.69E-46 |
| MS.gene055604 | MS.gene79342 | 0.810409 | 1.17E-50 | -1.69E-46 |
| MS.gene055647 | MS.gene79342 | 0.813973 | 1.95E-51 | -1.69E-46 |
| MS.gene055712 | MS.gene79342 | 0.818138 | 2.29E-52 | -1.69E-46 |
| MS.gene055859 | MS.gene79342 | 0.816701 | 4.83E-52 | -1.69E-46 |
| MS.gene055896 | MS.gene79342 | 0.843103 | 1.72E-58 | -1.69E-46 |
| MS.gene05592 | MS.gene79342 | 0.843175 | 1.65E-58 | -1.69E-46 |
| MS.gene055930 | MS.gene79342 | 0.813083 | 3.06E-51 | -1.69E-46 |
| MS.gene056191 | MS.gene79342 | 0.835468 | 1.65E-56 | -1.69E-46 |
| MS.gene056314 | MS.gene79342 | 0.829174 | 5.97E-55 | -1.69E-46 |
| MS.gene056407 | MS.gene79342 | 0.871315 | 7.51E-67 | -1.69E-46 |
| MS.gene056410 | MS.gene79342 | 0.889276 | 2.80E-73 | -1.69E-46 |
| MS.gene056609 | MS.gene79342 | 0.859584 | 3.74E-63 | -1.69E-46 |
| MS.gene056612 | MS.gene79342 | 0.890364 | 1.05E-73 | -1.69E-46 |
| MS.gene056796 | MS.gene79342 | 0.859049 | 5.41E-63 | -1.69E-46 |
| MS.gene056897 | MS.gene79342 | 0.814196 | 1.74E-51 | -1.69E-46 |
| MS.gene056902 | MS.gene79342 | 0.812516 | 4.08E-51 | -1.69E-46 |
| MS.gene056931 | MS.gene79342 | 0.808574 | 2.90E-50 | -1.69E-46 |
| MS.gene056933 | MS.gene79342 | 0.804075 | 2.57E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene79342 | 0.866899 | 2.03E-65 | -1.69E-46 |
| MS.gene05702 | MS.gene79342 | 0.829539 | 4.87E-55 | -1.69E-46 |
| MS.gene057121 | MS.gene79342 | 0.843957 | 1.02E-58 | -1.69E-46 |
| MS.gene057123 | MS.gene79342 | 0.835921 | 1.27E-56 | -1.69E-46 |
| MS.gene057129 | MS.gene79342 | 0.833067 | 6.60E-56 | -1.69E-46 |
| MS.gene057146 | MS.gene79342 | 0.826465 | 2.67E-54 | -1.69E-46 |
| MS.gene057245 | MS.gene79342 | 0.812486 | 4.14E-51 | -1.69E-46 |
| MS.gene057295 | MS.gene79342 | 0.824966 | 6.06E-54 | -1.69E-46 |
| MS.gene05733 | MS.gene79342 | 0.821559 | 3.79E-53 | -1.69E-46 |
| MS.gene05735 | MS.gene79342 | 0.807372 | 5.22E-50 | -1.69E-46 |
| MS.gene057439 | MS.gene79342 | 0.834749 | 2.50E-56 | -1.69E-46 |
| MS.gene057448 | MS.gene79342 | 0.85067 | 1.46E-60 | -1.69E-46 |
| MS.gene057449 | MS.gene79342 | 0.851229 | 1.02E-60 | -1.69E-46 |
| MS.gene057450 | MS.gene79342 | 0.868658 | 5.55E-66 | -1.69E-46 |
| MS.gene057927 | MS.gene79342 | 0.806217 | 9.16E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene79342 | 0.865524 | 5.55E-65 | -1.69E-46 |
| MS.gene058006 | MS.gene79342 | 0.801413 | 9.11E-49 | -1.69E-46 |
| MS.gene058082 | MS.gene79342 | 0.858028 | 1.09E-62 | -1.69E-46 |
| MS.gene05811 | MS.gene79342 | 0.91012 | 2.67E-82 | -1.69E-46 |
| MS.gene058233 | MS.gene79342 | 0.850172 | 2.02E-60 | -1.69E-46 |
| MS.gene058276 | MS.gene79342 | 0.838056 | 3.61E-57 | -1.69E-46 |
| MS.gene058293 | MS.gene79342 | 0.906825 | 9.81E-81 | -1.69E-46 |
| MS.gene058323 | MS.gene79342 | 0.823059 | 1.70E-53 | -1.69E-46 |
| MS.gene058365 | MS.gene79342 | 0.847689 | 9.87E-60 | -1.69E-46 |
| MS.gene05842 | MS.gene79342 | 0.823314 | 1.48E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene79342 | 0.912226 | 2.48E-83 | -1.69E-46 |
| MS.gene058787 | MS.gene79342 | 0.834113 | 3.62E-56 | -1.69E-46 |
| MS.gene058845 | MS.gene79342 | 0.834735 | 2.52E-56 | -1.69E-46 |
| MS.gene058993 | MS.gene79342 | 0.819432 | 1.17E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene79342 | 0.894528 | 2.26E-75 | -1.69E-46 |
| MS.gene059294 | MS.gene79342 | 0.814513 | 1.48E-51 | -1.69E-46 |
| MS.gene059326 | MS.gene79342 | 0.879465 | 1.22E-69 | -1.69E-46 |
| MS.gene059342 | MS.gene79342 | 0.843163 | 1.66E-58 | -1.69E-46 |
| MS.gene059518 | MS.gene79342 | 0.884489 | 1.84E-71 | -1.69E-46 |
| MS.gene059536 | MS.gene79342 | 0.842983 | 1.85E-58 | -1.69E-46 |
| MS.gene059597 | MS.gene79342 | 0.870023 | 2.00E-66 | -1.69E-46 |
| MS.gene05959 | MS.gene79342 | 0.869379 | 3.24E-66 | -1.69E-46 |
| MS.gene059676 | MS.gene79342 | 0.905445 | 4.26E-80 | -1.69E-46 |
| MS.gene059688 | MS.gene79342 | 0.867682 | 1.14E-65 | -1.69E-46 |
| MS.gene059692 | MS.gene79342 | 0.884774 | 1.44E-71 | -1.69E-46 |
| MS.gene059695 | MS.gene79342 | 0.883023 | 6.37E-71 | -1.69E-46 |
| MS.gene059708 | MS.gene79342 | 0.854435 | 1.23E-61 | -1.69E-46 |
| MS.gene05984 | MS.gene79342 | 0.874604 | 5.93E-68 | -1.69E-46 |
| MS.gene059894 | MS.gene79342 | 0.895394 | 9.99E-76 | -1.69E-46 |
| MS.gene059899 | MS.gene79342 | 0.814337 | 1.62E-51 | -1.69E-46 |
| MS.gene059960 | MS.gene79342 | 0.879054 | 1.70E-69 | -1.69E-46 |
| MS.gene059974 | MS.gene79342 | 0.830603 | 2.68E-55 | -1.69E-46 |
| MS.gene060005 | MS.gene79342 | 0.854889 | 9.11E-62 | -1.69E-46 |
| MS.gene060193 | MS.gene79342 | 0.807325 | 5.34E-50 | -1.69E-46 |
| MS.gene06037 | MS.gene79342 | 0.852222 | 5.32E-61 | -1.69E-46 |
| MS.gene060403 | MS.gene79342 | 0.803 | 4.29E-49 | -1.69E-46 |
| MS.gene060407 | MS.gene79342 | 0.824784 | 6.69E-54 | -1.69E-46 |
| MS.gene060476 | MS.gene79342 | 0.800876 | 1.17E-48 | -1.69E-46 |
| MS.gene060559 | MS.gene79342 | 0.81599 | 6.97E-52 | -1.69E-46 |
| MS.gene060804 | MS.gene79342 | 0.855476 | 6.15E-62 | -1.69E-46 |
| MS.gene060818 | MS.gene79342 | 0.837212 | 5.94E-57 | -1.69E-46 |
| MS.gene060837 | MS.gene79342 | 0.805532 | 1.28E-49 | -1.69E-46 |
| MS.gene06090 | MS.gene79342 | 0.854849 | 9.36E-62 | -1.69E-46 |
| MS.gene061041 | MS.gene79342 | 0.806408 | 8.35E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene79342 | 0.865911 | 4.19E-65 | -1.69E-46 |
| MS.gene061051 | MS.gene79342 | -0.887901 | 9.49E-73 | -1.69E-46 |
| MS.gene061154 | MS.gene79342 | 0.815178 | 1.06E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene79342 | 0.863583 | 2.24E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79342.t1 | MTR_3g027140 | 94.068 | 236 | 10 | 2 | 1 | 233 | 1 | 235 | 1.26e-158 | 439 |
| MS.gene79342.t1 | MTR_1g056520 | 42.614 | 176 | 101 | 0 | 58 | 233 | 108 | 283 | 6.20e-45 | 152 |
| MS.gene79342.t1 | MTR_7g106440 | 40.526 | 190 | 109 | 1 | 48 | 233 | 99 | 288 | 6.60e-43 | 147 |
| MS.gene79342.t1 | MTR_1g045510 | 39.429 | 175 | 98 | 1 | 59 | 233 | 114 | 280 | 3.30e-40 | 139 |
| MS.gene79342.t1 | MTR_3g075500 | 40.212 | 189 | 109 | 2 | 46 | 233 | 97 | 282 | 2.11e-34 | 124 |
| MS.gene79342.t1 | MTR_3g075500 | 39.241 | 79 | 48 | 0 | 57 | 135 | 205 | 283 | 8.85e-13 | 66.6 |
| MS.gene79342.t1 | MTR_1g064230 | 35.000 | 260 | 131 | 5 | 4 | 233 | 21 | 272 | 2.35e-34 | 124 |
| MS.gene79342.t1 | MTR_3g075500 | 40.110 | 182 | 100 | 3 | 46 | 226 | 97 | 270 | 1.33e-30 | 114 |
| MS.gene79342.t1 | MTR_4g104470 | 38.286 | 175 | 103 | 2 | 59 | 233 | 123 | 292 | 1.37e-30 | 115 |
| MS.gene79342.t1 | MTR_4g104470 | 44.872 | 78 | 43 | 0 | 59 | 136 | 217 | 294 | 1.30e-16 | 77.4 |
| MS.gene79342.t1 | MTR_4g124940 | 29.381 | 194 | 111 | 3 | 60 | 231 | 133 | 322 | 3.16e-17 | 80.1 |
| MS.gene79342.t1 | MTR_4g124940 | 31.492 | 181 | 110 | 4 | 53 | 233 | 41 | 207 | 9.26e-17 | 78.6 |
| MS.gene79342.t1 | MTR_8g022050 | 29.834 | 181 | 113 | 4 | 53 | 233 | 57 | 223 | 2.41e-15 | 74.7 |
| MS.gene79342.t1 | MTR_8g022050 | 28.218 | 202 | 118 | 5 | 53 | 231 | 142 | 339 | 6.17e-13 | 67.8 |
| MS.gene79342.t1 | MTR_6g040070 | 27.619 | 210 | 127 | 5 | 32 | 227 | 79 | 277 | 2.44e-15 | 75.1 |
| MS.gene79342.t1 | MTR_4g085540 | 28.070 | 171 | 111 | 2 | 60 | 230 | 36 | 194 | 4.29e-15 | 74.3 |
| MS.gene79342.t1 | MTR_4g085540 | 31.414 | 191 | 122 | 5 | 49 | 233 | 204 | 391 | 7.77e-14 | 70.5 |
| MS.gene79342.t1 | MTR_3g109090 | 28.649 | 185 | 110 | 3 | 53 | 233 | 55 | 221 | 9.41e-15 | 73.2 |
| MS.gene79342.t1 | MTR_3g109090 | 25.258 | 194 | 118 | 3 | 60 | 230 | 147 | 336 | 3.73e-12 | 65.5 |
| MS.gene79342.t1 | MTR_3g109090 | 28.649 | 185 | 110 | 3 | 53 | 233 | 39 | 205 | 9.45e-15 | 73.2 |
| MS.gene79342.t1 | MTR_3g109090 | 25.258 | 194 | 118 | 3 | 60 | 230 | 131 | 320 | 3.72e-12 | 65.5 |
| MS.gene79342.t1 | MTR_3g082650 | 25.000 | 184 | 121 | 3 | 53 | 233 | 13 | 182 | 1.12e-14 | 72.4 |
| MS.gene79342.t1 | MTR_1g061870 | 30.303 | 198 | 124 | 6 | 43 | 233 | 178 | 368 | 2.51e-14 | 72.0 |
| MS.gene79342.t1 | MTR_1g061870 | 26.455 | 189 | 127 | 2 | 44 | 232 | 1 | 177 | 1.39e-13 | 69.7 |
| MS.gene79342.t1 | MTR_6g004810 | 25.258 | 194 | 120 | 4 | 47 | 233 | 34 | 209 | 2.67e-14 | 71.6 |
| MS.gene79342.t1 | MTR_3g065190 | 27.586 | 174 | 113 | 2 | 61 | 233 | 28 | 189 | 7.19e-14 | 70.5 |
| MS.gene79342.t1 | MTR_1g019150 | 28.986 | 207 | 136 | 6 | 32 | 230 | 184 | 387 | 1.01e-13 | 70.1 |
| MS.gene79342.t1 | MTR_1g019150 | 24.561 | 171 | 117 | 2 | 60 | 230 | 34 | 192 | 4.06e-12 | 65.5 |
| MS.gene79342.t1 | MTR_3g099590 | 25.455 | 220 | 148 | 6 | 20 | 230 | 44 | 256 | 2.59e-13 | 68.2 |
| MS.gene79342.t1 | MTR_5g030020 | 31.429 | 175 | 113 | 5 | 58 | 230 | 96 | 265 | 6.21e-13 | 67.4 |
| MS.gene79342.t1 | MTR_1g097440 | 30.102 | 196 | 112 | 5 | 43 | 223 | 193 | 378 | 6.56e-13 | 67.8 |
| MS.gene79342.t1 | MTR_7g102730 | 30.556 | 180 | 116 | 4 | 60 | 233 | 191 | 367 | 1.00e-12 | 67.4 |
| MS.gene79342.t1 | MTR_7g102730 | 27.746 | 173 | 113 | 3 | 60 | 232 | 12 | 172 | 7.47e-12 | 64.7 |
| MS.gene79342.t1 | MTR_7g102730 | 27.624 | 181 | 116 | 5 | 56 | 233 | 96 | 264 | 8.84e-11 | 61.6 |
| MS.gene79342.t1 | MTR_7g118230 | 30.137 | 146 | 94 | 2 | 24 | 164 | 4 | 146 | 2.87e-12 | 65.5 |
| MS.gene79342.t1 | MTR_3g102040 | 24.561 | 171 | 117 | 2 | 60 | 230 | 26 | 184 | 5.94e-12 | 65.1 |
| MS.gene79342.t1 | MTR_3g102040 | 32.240 | 183 | 109 | 7 | 60 | 233 | 205 | 381 | 1.60e-11 | 63.9 |
| MS.gene79342.t1 | MTR_2g097960 | 24.719 | 178 | 127 | 2 | 57 | 233 | 14 | 185 | 9.31e-12 | 64.3 |
| MS.gene79342.t1 | MTR_6g040190 | 25.581 | 172 | 114 | 4 | 60 | 230 | 27 | 185 | 3.52e-11 | 62.8 |
| MS.gene79342.t1 | MTR_5g017280 | 26.554 | 177 | 115 | 4 | 58 | 233 | 4 | 166 | 4.28e-11 | 62.0 |
| MS.gene79342.t1 | MTR_5g017280 | 26.554 | 177 | 115 | 4 | 58 | 233 | 4 | 166 | 5.80e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79342.t1 | AT3G52150 | 68.812 | 202 | 57 | 4 | 38 | 233 | 52 | 253 | 1.35e-92 | 272 |
| MS.gene79342.t1 | AT3G52150 | 68.812 | 202 | 57 | 4 | 38 | 233 | 52 | 253 | 1.35e-92 | 272 |
| MS.gene79342.t1 | AT3G52380 | 41.885 | 191 | 103 | 2 | 49 | 233 | 107 | 295 | 3.16e-45 | 154 |
| MS.gene79342.t1 | AT1G60000 | 36.735 | 245 | 130 | 4 | 7 | 233 | 16 | 253 | 4.34e-39 | 136 |
| MS.gene79342.t1 | AT2G37220 | 36.548 | 197 | 95 | 2 | 59 | 233 | 92 | 280 | 8.88e-35 | 125 |
| MS.gene79342.t1 | AT5G50250 | 38.122 | 181 | 107 | 2 | 53 | 233 | 108 | 283 | 1.87e-34 | 125 |
| MS.gene79342.t1 | AT5G50250 | 40.741 | 81 | 48 | 0 | 56 | 136 | 205 | 285 | 1.23e-13 | 68.9 |
| MS.gene79342.t1 | AT4G24770 | 38.830 | 188 | 109 | 3 | 47 | 233 | 138 | 320 | 3.06e-31 | 117 |
| MS.gene79342.t1 | AT4G24770 | 46.341 | 82 | 43 | 1 | 55 | 136 | 242 | 322 | 3.48e-17 | 79.3 |
| MS.gene79342.t1 | AT4G24770 | 38.830 | 188 | 109 | 3 | 47 | 233 | 138 | 320 | 3.06e-31 | 117 |
| MS.gene79342.t1 | AT4G24770 | 46.341 | 82 | 43 | 1 | 55 | 136 | 242 | 322 | 3.48e-17 | 79.3 |
| MS.gene79342.t1 | AT1G01080 | 33.505 | 194 | 123 | 3 | 45 | 233 | 95 | 287 | 8.40e-23 | 94.4 |
| MS.gene79342.t1 | AT2G35410 | 33.871 | 186 | 112 | 4 | 49 | 228 | 86 | 266 | 1.45e-22 | 94.0 |
| MS.gene79342.t1 | AT1G01080 | 33.333 | 195 | 123 | 4 | 45 | 233 | 95 | 288 | 1.58e-21 | 90.9 |
| MS.gene79342.t1 | AT1G01080 | 33.333 | 183 | 116 | 3 | 45 | 222 | 95 | 276 | 1.67e-20 | 87.8 |
| MS.gene79342.t1 | AT1G22760 | 33.846 | 195 | 115 | 6 | 39 | 223 | 207 | 397 | 2.05e-18 | 84.0 |
| MS.gene79342.t1 | AT1G71770 | 33.333 | 195 | 116 | 6 | 39 | 223 | 217 | 407 | 3.32e-17 | 80.5 |
| MS.gene79342.t1 | AT1G71770 | 28.070 | 171 | 110 | 3 | 60 | 230 | 61 | 218 | 4.23e-12 | 65.5 |
| MS.gene79342.t1 | AT1G71770 | 33.333 | 195 | 116 | 6 | 39 | 223 | 217 | 407 | 3.32e-17 | 80.5 |
| MS.gene79342.t1 | AT1G71770 | 28.070 | 171 | 110 | 3 | 60 | 230 | 61 | 218 | 4.23e-12 | 65.5 |
| MS.gene79342.t1 | AT3G13224 | 29.189 | 185 | 108 | 6 | 56 | 233 | 8 | 176 | 6.01e-17 | 79.0 |
| MS.gene79342.t1 | AT3G14100 | 32.044 | 181 | 109 | 4 | 53 | 233 | 54 | 220 | 6.63e-17 | 79.3 |
| MS.gene79342.t1 | AT3G14100 | 28.571 | 182 | 104 | 3 | 60 | 219 | 146 | 323 | 6.12e-14 | 70.9 |
| MS.gene79342.t1 | AT3G16380 | 31.280 | 211 | 132 | 5 | 31 | 233 | 174 | 379 | 1.60e-16 | 78.6 |
| MS.gene79342.t1 | AT3G16380 | 29.213 | 178 | 108 | 5 | 60 | 233 | 114 | 277 | 3.09e-12 | 65.9 |
| MS.gene79342.t1 | AT3G13224 | 29.885 | 174 | 99 | 6 | 53 | 219 | 14 | 171 | 2.97e-16 | 75.5 |
| MS.gene79342.t1 | AT3G13224 | 28.723 | 188 | 111 | 6 | 53 | 233 | 14 | 185 | 1.41e-15 | 75.1 |
| MS.gene79342.t1 | AT1G54080 | 30.387 | 181 | 112 | 4 | 53 | 233 | 58 | 224 | 1.61e-15 | 75.5 |
| MS.gene79342.t1 | AT1G54080 | 27.320 | 194 | 114 | 4 | 60 | 230 | 150 | 339 | 9.68e-13 | 67.4 |
| MS.gene79342.t1 | AT1G49760 | 28.736 | 174 | 108 | 3 | 60 | 231 | 47 | 206 | 1.92e-15 | 75.5 |
| MS.gene79342.t1 | AT1G49760 | 31.361 | 169 | 109 | 3 | 60 | 223 | 226 | 392 | 2.90e-13 | 68.9 |
| MS.gene79342.t1 | AT1G49760 | 28.191 | 188 | 121 | 5 | 51 | 233 | 121 | 299 | 5.96e-12 | 65.1 |
| MS.gene79342.t1 | AT1G49760 | 28.736 | 174 | 108 | 3 | 60 | 231 | 47 | 206 | 1.92e-15 | 75.5 |
| MS.gene79342.t1 | AT1G49760 | 31.361 | 169 | 109 | 3 | 60 | 223 | 226 | 392 | 2.90e-13 | 68.9 |
| MS.gene79342.t1 | AT1G49760 | 28.191 | 188 | 121 | 5 | 51 | 233 | 121 | 299 | 5.96e-12 | 65.1 |
| MS.gene79342.t1 | AT2G36660 | 30.114 | 176 | 116 | 3 | 60 | 230 | 203 | 376 | 5.11e-15 | 73.9 |
| MS.gene79342.t1 | AT2G36660 | 28.652 | 178 | 115 | 3 | 55 | 232 | 21 | 186 | 9.28e-13 | 67.4 |
| MS.gene79342.t1 | AT4G09040 | 26.263 | 198 | 132 | 5 | 40 | 233 | 19 | 206 | 8.05e-15 | 71.6 |
| MS.gene79342.t1 | AT4G09040 | 24.561 | 228 | 147 | 6 | 24 | 233 | 46 | 266 | 8.99e-15 | 72.4 |
| MS.gene79342.t1 | AT1G17370 | 30.387 | 181 | 112 | 4 | 53 | 233 | 49 | 215 | 1.07e-14 | 72.8 |
| MS.gene79342.t1 | AT1G17370 | 27.083 | 192 | 116 | 4 | 60 | 231 | 141 | 328 | 1.22e-13 | 69.7 |
| MS.gene79342.t1 | AT1G17370 | 30.387 | 181 | 112 | 4 | 53 | 233 | 49 | 215 | 1.14e-14 | 72.8 |
| MS.gene79342.t1 | AT1G17370 | 26.154 | 195 | 117 | 4 | 60 | 231 | 141 | 331 | 4.98e-14 | 70.9 |
| MS.gene79342.t1 | AT2G23350 | 32.768 | 177 | 110 | 4 | 60 | 230 | 227 | 400 | 1.53e-14 | 72.8 |
| MS.gene79342.t1 | AT2G23350 | 32.402 | 179 | 110 | 5 | 56 | 233 | 132 | 300 | 5.57e-13 | 68.2 |
| MS.gene79342.t1 | AT1G54080 | 30.270 | 185 | 111 | 5 | 53 | 233 | 58 | 228 | 1.97e-14 | 72.0 |
| MS.gene79342.t1 | AT1G54080 | 29.341 | 167 | 91 | 4 | 87 | 230 | 181 | 343 | 2.39e-11 | 63.2 |
| MS.gene79342.t1 | AT4G34110 | 32.768 | 177 | 110 | 5 | 60 | 230 | 217 | 390 | 4.04e-14 | 71.6 |
| MS.gene79342.t1 | AT4G34110 | 30.270 | 185 | 113 | 6 | 55 | 233 | 116 | 290 | 2.35e-13 | 69.3 |
| MS.gene79342.t1 | AT4G34110 | 25.581 | 172 | 116 | 2 | 60 | 231 | 38 | 197 | 1.28e-12 | 67.0 |
| MS.gene79342.t1 | AT2G18510 | 27.429 | 175 | 114 | 2 | 60 | 233 | 27 | 189 | 3.35e-13 | 68.2 |
| MS.gene79342.t1 | AT1G34140 | 32.222 | 180 | 114 | 5 | 60 | 233 | 121 | 298 | 5.93e-13 | 67.8 |
| MS.gene79342.t1 | AT3G53460 | 43.421 | 76 | 43 | 0 | 158 | 233 | 279 | 354 | 6.29e-13 | 67.4 |
| MS.gene79342.t1 | AT3G53460 | 38.961 | 77 | 47 | 0 | 59 | 135 | 279 | 355 | 1.64e-11 | 63.5 |
| MS.gene79342.t1 | AT3G53460 | 43.421 | 76 | 43 | 0 | 158 | 233 | 258 | 333 | 7.55e-13 | 67.4 |
| MS.gene79342.t1 | AT3G53460 | 44.304 | 79 | 44 | 0 | 59 | 137 | 100 | 178 | 2.34e-12 | 65.9 |
| MS.gene79342.t1 | AT3G53460 | 38.961 | 77 | 47 | 0 | 59 | 135 | 258 | 334 | 1.75e-11 | 63.2 |
| MS.gene79342.t1 | AT3G53460 | 43.421 | 76 | 43 | 0 | 158 | 233 | 258 | 333 | 7.55e-13 | 67.4 |
| MS.gene79342.t1 | AT3G53460 | 44.304 | 79 | 44 | 0 | 59 | 137 | 100 | 178 | 2.34e-12 | 65.9 |
| MS.gene79342.t1 | AT3G53460 | 38.961 | 77 | 47 | 0 | 59 | 135 | 258 | 334 | 1.75e-11 | 63.2 |
| MS.gene79342.t1 | AT3G53460 | 43.421 | 76 | 43 | 0 | 158 | 233 | 258 | 333 | 7.55e-13 | 67.4 |
| MS.gene79342.t1 | AT3G53460 | 44.304 | 79 | 44 | 0 | 59 | 137 | 100 | 178 | 2.34e-12 | 65.9 |
| MS.gene79342.t1 | AT3G53460 | 38.961 | 77 | 47 | 0 | 59 | 135 | 258 | 334 | 1.75e-11 | 63.2 |
| MS.gene79342.t1 | AT4G13860 | 43.836 | 73 | 41 | 0 | 158 | 230 | 4 | 76 | 8.41e-13 | 62.8 |
| MS.gene79342.t1 | AT4G13860 | 37.333 | 75 | 47 | 0 | 59 | 133 | 4 | 78 | 2.64e-11 | 58.5 |
| MS.gene79342.t1 | AT5G40490 | 25.275 | 182 | 111 | 4 | 59 | 233 | 43 | 206 | 1.47e-12 | 66.6 |
| MS.gene79342.t1 | AT5G19350 | 23.034 | 178 | 129 | 2 | 57 | 233 | 23 | 193 | 7.00e-11 | 61.6 |
| MS.gene79342.t1 | AT5G19350 | 23.034 | 178 | 129 | 2 | 57 | 233 | 23 | 193 | 7.44e-11 | 61.6 |
Find 44 sgRNAs with CRISPR-Local
Find 340 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAAACCTCCTGTTGTTAA+AGG | 0.202407 | 3.1:+18205297 | None:intergenic |
| TTAAGTTTGTGTTGTGAGTT+AGG | 0.248696 | 3.1:+18209358 | None:intergenic |
| AGAAGGTGTTGTTGTCGTTT+TGG | 0.261003 | 3.1:+18209326 | None:intergenic |
| TTTATCTCATGACAGCAAAT+TGG | 0.319543 | 3.1:-18205354 | MS.gene79342:intron |
| TGTTAACTGCAGTTGTTAGA+AGG | 0.327875 | 3.1:-18204191 | MS.gene79342:intron |
| TGTATGACAAATACTCTAAA+AGG | 0.332650 | 3.1:-18205547 | MS.gene79342:CDS |
| GCCAAGGTTTCACGGGTTCC+TGG | 0.336172 | 3.1:-18205150 | MS.gene79342:CDS |
| ACCTCAAAATCCAGTGGTTT+CGG | 0.344689 | 3.1:-18205126 | MS.gene79342:CDS |
| GCAGAAAATCCGAGTGAATA+AGG | 0.353968 | 3.1:-18204168 | MS.gene79342:CDS |
| CAAGGTATATGTGGGAAATC+TGG | 0.373394 | 3.1:-18205235 | MS.gene79342:CDS |
| TTTCCCACATATACCTTGTA+AGG | 0.379798 | 3.1:+18205240 | None:intergenic |
| ACCATGTTCTTGAACAATCT+TGG | 0.384608 | 3.1:+18209170 | None:intergenic |
| TAAGTTTGTGTTGTGAGTTA+GGG | 0.405651 | 3.1:+18209359 | None:intergenic |
| TTGTGTTGTGAGTTAGGGAG+AGG | 0.417788 | 3.1:+18209364 | None:intergenic |
| GCGGATTCCTCGGCCTGGAC+TGG | 0.418312 | 3.1:+18205276 | None:intergenic |
| CTCTTAGTGCCAAGGTTTCA+CGG | 0.433896 | 3.1:-18205158 | MS.gene79342:CDS |
| CCAAGGTTTCACGGGTTCCT+GGG | 0.476496 | 3.1:-18205149 | MS.gene79342:CDS |
| CAGTCCTTACAAGGTATATG+TGG | 0.476562 | 3.1:-18205244 | MS.gene79342:CDS |
| GTCTACAAATGCGGATTCCT+CGG | 0.478263 | 3.1:+18205266 | None:intergenic |
| AACAGGAGGTTTGCCAGTCC+AGG | 0.484987 | 3.1:-18205289 | MS.gene79342:CDS |
| GCTGTTAGAAAACTTTATGT+TGG | 0.495068 | 3.1:-18209228 | MS.gene79342:CDS |
| ATTTGTAGACAGTCCTTACA+AGG | 0.497965 | 3.1:-18205253 | MS.gene79342:CDS |
| CCCAGGAACCCGTGAAACCT+TGG | 0.513301 | 3.1:+18205149 | None:intergenic |
| ATCTCATGACAGCAAATTGG+AGG | 0.517324 | 3.1:-18205351 | MS.gene79342:intron |
| GTCGTAACGACAAGGGAAGA+AGG | 0.535775 | 3.1:+18209309 | None:intergenic |
| AGTAACAAAGCCGAAACCAC+TGG | 0.538663 | 3.1:+18205116 | None:intergenic |
| TCTTAGTGCCAAGGTTTCAC+GGG | 0.544466 | 3.1:-18205157 | MS.gene79342:CDS |
| AGCAAATGCTCTTAGTGCCA+AGG | 0.546104 | 3.1:-18205166 | MS.gene79342:CDS |
| TGCTGCGTTTGCATCCTCAA+CGG | 0.548877 | 3.1:+18205493 | None:intergenic |
| GCCAAGATTGTTCAAGAACA+TGG | 0.550336 | 3.1:-18209171 | MS.gene79342:CDS |
| GTTAACTGCAGTTGTTAGAA+GGG | 0.555240 | 3.1:-18204190 | MS.gene79342:intron |
| CAAATGCGGATTCCTCGGCC+TGG | 0.555822 | 3.1:+18205271 | None:intergenic |
| TGTTTCTTCTGAACAAGCCA+CGG | 0.601130 | 3.1:-18209262 | MS.gene79342:CDS |
| GCAGCAGCTGAGAAACTCAA+TGG | 0.608545 | 3.1:-18205476 | MS.gene79342:CDS |
| TGTTACAATGAAAACCGTTG+AGG | 0.611936 | 3.1:-18205507 | MS.gene79342:CDS |
| AGGTTTGCCAGTCCAGGCCG+AGG | 0.614335 | 3.1:-18205283 | MS.gene79342:CDS |
| TCTCATGACAGCAAATTGGA+GGG | 0.637188 | 3.1:-18205350 | MS.gene79342:intron |
| AACGACGTGTCGTAACGACA+AGG | 0.638429 | 3.1:+18209301 | None:intergenic |
| CCTGGGACCTCAAAATCCAG+TGG | 0.638570 | 3.1:-18205132 | MS.gene79342:CDS |
| AGTCCTTACAAGGTATATGT+GGG | 0.639932 | 3.1:-18205243 | MS.gene79342:CDS |
| ACGACGTGTCGTAACGACAA+GGG | 0.641069 | 3.1:+18209302 | None:intergenic |
| GTAAGGACTGTCTACAAATG+CGG | 0.643041 | 3.1:+18205257 | None:intergenic |
| TCATCATTACTAACAGTACG+AGG | 0.729772 | 3.1:+18209198 | None:intergenic |
| AACAGCAGGAGAATCAACCG+TGG | 0.770845 | 3.1:+18209245 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATGTTGAAAAATAAAA+AGG | + | chr3.1:18208809-18208828 | None:intergenic | 10.0% |
| !! | TACAAATTAAAAATGATAAA+AGG | + | chr3.1:18206929-18206948 | None:intergenic | 10.0% |
| !! | TATATGTTGAAAAATAAAAA+GGG | + | chr3.1:18208808-18208827 | None:intergenic | 10.0% |
| !!! | AAAAACAAAAAAAACTTTTA+AGG | - | chr3.1:18205275-18205294 | MS.gene79342:CDS | 10.0% |
| !!! | TTTAAAAATGATTTTTGTTT+TGG | + | chr3.1:18205604-18205623 | None:intergenic | 10.0% |
| !! | AATACAAAAGAAAATCATAT+GGG | + | chr3.1:18206749-18206768 | None:intergenic | 15.0% |
| !! | AATGTAGTATAATAGATTTA+AGG | - | chr3.1:18205817-18205836 | MS.gene79342:intron | 15.0% |
| !! | ACTAAAAATTAAGATACATA+TGG | + | chr3.1:18206150-18206169 | None:intergenic | 15.0% |
| !! | TTATAATAATCTGTAACAAA+CGG | + | chr3.1:18205501-18205520 | None:intergenic | 15.0% |
| !!! | AAATTAATTTTGGTTGAAAT+GGG | - | chr3.1:18204512-18204531 | MS.gene79342:intron | 15.0% |
| !!! | ATAATAGATTTAAGGTAAAA+TGG | - | chr3.1:18205825-18205844 | MS.gene79342:intron | 15.0% |
| !!! | ATGAATTTTACTCATTTATA+AGG | - | chr3.1:18207754-18207773 | MS.gene79342:intron | 15.0% |
| !!! | ATTAACAATTTTCAATTTCA+GGG | + | chr3.1:18208872-18208891 | None:intergenic | 15.0% |
| !!! | TAAAGAAGTATATTTCAAAA+TGG | - | chr3.1:18206775-18206794 | MS.gene79342:intron | 15.0% |
| !!! | TGATTTTGTGAAATTAATTT+TGG | - | chr3.1:18204502-18204521 | MS.gene79342:intron | 15.0% |
| !!! | TTTTAACTATTGTAATTTGT+AGG | - | chr3.1:18206344-18206363 | MS.gene79342:intron | 15.0% |
| !!! | TTTTATTATGATTGATTCAT+AGG | - | chr3.1:18207983-18208002 | MS.gene79342:intron | 15.0% |
| !!! | TTTTGATATTAATAGAAGTT+GGG | + | chr3.1:18206511-18206530 | None:intergenic | 15.0% |
| !!! | TTTTTTTGAACAAATCAAAA+TGG | + | chr3.1:18205259-18205278 | None:intergenic | 15.0% |
| !! | AAAACAAAACAAATCAAAGA+AGG | - | chr3.1:18206547-18206566 | MS.gene79342:intron | 20.0% |
| !! | AAATGAAACCAAATAGATAA+AGG | + | chr3.1:18206185-18206204 | None:intergenic | 20.0% |
| !! | AGAATATGTTGTAAAAAACA+AGG | - | chr3.1:18205787-18205806 | MS.gene79342:intron | 20.0% |
| !! | ATCAATCCTACATATATTAA+TGG | - | chr3.1:18208925-18208944 | MS.gene79342:intron | 20.0% |
| !! | ATGAAAAATATCAAAACTTG+AGG | + | chr3.1:18209176-18209195 | None:intergenic | 20.0% |
| !! | CAATACAAAAGAAAATCATA+TGG | + | chr3.1:18206750-18206769 | None:intergenic | 20.0% |
| !! | GAAATCAAAATTCTGTTAAA+GGG | + | chr3.1:18207604-18207623 | None:intergenic | 20.0% |
| !! | GAAATTGAAAATTGTTAATC+TGG | - | chr3.1:18208873-18208892 | MS.gene79342:intron | 20.0% |
| !! | GAATTGAAGTTTGTAAAATT+AGG | - | chr3.1:18204907-18204926 | MS.gene79342:intron | 20.0% |
| !! | GGTTACACTAATATTAAAAT+AGG | - | chr3.1:18207368-18207387 | MS.gene79342:intron | 20.0% |
| !! | TAAATGAGTAAAATTCATTG+AGG | + | chr3.1:18207752-18207771 | None:intergenic | 20.0% |
| !! | TAATGTTCATTCAACAATTT+AGG | - | chr3.1:18208150-18208169 | MS.gene79342:intron | 20.0% |
| !! | TAATTTCATTTAACAAGAGA+AGG | - | chr3.1:18206090-18206109 | MS.gene79342:intron | 20.0% |
| !! | TACAATTTCTATCATGATTT+GGG | - | chr3.1:18209241-18209260 | MS.gene79342:CDS | 20.0% |
| !! | TGAAATCAAAATTCTGTTAA+AGG | + | chr3.1:18207605-18207624 | None:intergenic | 20.0% |
| !! | TTACAATTTCTATCATGATT+TGG | - | chr3.1:18209240-18209259 | MS.gene79342:CDS | 20.0% |
| !! | TTATATGTTATTAGTTGTGT+CGG | + | chr3.1:18204732-18204751 | None:intergenic | 20.0% |
| !!! | AACAGAATTTTGATTTCATA+AGG | - | chr3.1:18207607-18207626 | MS.gene79342:intron | 20.0% |
| !!! | ATGAAGAAATGTATGATTTT+AGG | - | chr3.1:18205473-18205492 | MS.gene79342:CDS | 20.0% |
| !!! | CATTTTTAATTTGTAGAAGT+TGG | - | chr3.1:18206934-18206953 | MS.gene79342:intron | 20.0% |
| !!! | CTTCATTTTGAAAAATTAAC+TGG | - | chr3.1:18204940-18204959 | MS.gene79342:intron | 20.0% |
| !!! | GAAAAATAAAAAGGGTATTT+CGG | + | chr3.1:18208800-18208819 | None:intergenic | 20.0% |
| !!! | GAAATTAATTTTGGTTGAAA+TGG | - | chr3.1:18204511-18204530 | MS.gene79342:intron | 20.0% |
| !!! | GATTAACAATTTTCAATTTC+AGG | + | chr3.1:18208873-18208892 | None:intergenic | 20.0% |
| !!! | GATTTTCTGTTTTAAGTTTA+TGG | - | chr3.1:18207096-18207115 | MS.gene79342:intron | 20.0% |
| !!! | GTTTTGATATTAATAGAAGT+TGG | + | chr3.1:18206512-18206531 | None:intergenic | 20.0% |
| !!! | TGAAGAAATGTATGATTTTA+GGG | - | chr3.1:18205474-18205493 | MS.gene79342:CDS | 20.0% |
| ! | AAAACATACAAAGAAAGTTG+AGG | + | chr3.1:18207915-18207934 | None:intergenic | 25.0% |
| ! | AAAGAAAATCATATGGGTTT+AGG | + | chr3.1:18206743-18206762 | None:intergenic | 25.0% |
| ! | AAGAAAATCATATGGGTTTA+GGG | + | chr3.1:18206742-18206761 | None:intergenic | 25.0% |
| ! | AATCCTACATATATTAATGG+AGG | - | chr3.1:18208928-18208947 | MS.gene79342:intron | 25.0% |
| ! | ACAATTTCTATCATGATTTG+GGG | - | chr3.1:18209242-18209261 | MS.gene79342:CDS | 25.0% |
| ! | ACAATTTGAGGAACTAAATT+AGG | - | chr3.1:18209032-18209051 | MS.gene79342:intron | 25.0% |
| ! | AGATGAAAAACAATCTACAA+AGG | - | chr3.1:18208700-18208719 | MS.gene79342:intron | 25.0% |
| ! | AGGATTTATCATATAACCTA+AGG | - | chr3.1:18207839-18207858 | MS.gene79342:intron | 25.0% |
| ! | ATCATACATTTCTTCATAAG+AGG | + | chr3.1:18205470-18205489 | None:intergenic | 25.0% |
| ! | ATCCTACATATATTAATGGA+GGG | - | chr3.1:18208929-18208948 | MS.gene79342:intron | 25.0% |
| ! | ATGTACGTTTAAAGAAAACT+TGG | - | chr3.1:18205921-18205940 | MS.gene79342:intron | 25.0% |
| ! | ATGTTAACATATTTGGAGAT+GGG | + | chr3.1:18209217-18209236 | None:intergenic | 25.0% |
| ! | ATTGAAAAGCAACATAGAAA+TGG | - | chr3.1:18206987-18207006 | MS.gene79342:intron | 25.0% |
| ! | CACTAAACATAATTTAGCTA+TGG | - | chr3.1:18205963-18205982 | MS.gene79342:intron | 25.0% |
| ! | GAAGAATGAAAAAGTAATAG+CGG | - | chr3.1:18205875-18205894 | MS.gene79342:intron | 25.0% |
| ! | GATGAAAAACAATCTACAAA+GGG | - | chr3.1:18208701-18208720 | MS.gene79342:intron | 25.0% |
| ! | GATTTGATAAGAAATCCAAA+CGG | + | chr3.1:18208908-18208927 | None:intergenic | 25.0% |
| ! | GGTAAATGAAACATTTCATA+CGG | - | chr3.1:18205846-18205865 | MS.gene79342:intron | 25.0% |
| ! | GTAAGTCATGTTAACATATT+TGG | + | chr3.1:18209224-18209243 | None:intergenic | 25.0% |
| ! | GTTATATGATAAATCCTACA+TGG | + | chr3.1:18207836-18207855 | None:intergenic | 25.0% |
| ! | GTTTAACTCCTTTATCTATT+TGG | - | chr3.1:18206174-18206193 | MS.gene79342:intron | 25.0% |
| ! | TAGGAGAATTTAGATTTCAA+TGG | - | chr3.1:18207387-18207406 | MS.gene79342:intron | 25.0% |
| ! | TGTATGACAAATACTCTAAA+AGG | - | chr3.1:18208009-18208028 | MS.gene79342:intron | 25.0% |
| ! | TTATTAGCTGAAACTCATAT+GGG | + | chr3.1:18205373-18205392 | None:intergenic | 25.0% |
| ! | TTCAGTATAATTACATGTGT+TGG | - | chr3.1:18204752-18204771 | MS.gene79342:intron | 25.0% |
| ! | TTGAAAAGCAACATAGAAAT+GGG | - | chr3.1:18206988-18207007 | MS.gene79342:intron | 25.0% |
| !! | AATTTAGTTCCTCAAATTGT+AGG | + | chr3.1:18209032-18209051 | None:intergenic | 25.0% |
| !! | AGAAGTATATTTCAAAATGG+CGG | - | chr3.1:18206778-18206797 | MS.gene79342:intron | 25.0% |
| !! | AGTTTAGAATATTGATCATG+TGG | - | chr3.1:18208987-18209006 | MS.gene79342:intron | 25.0% |
| !! | CAACAATTTAGGTTTCTTAA+AGG | - | chr3.1:18208161-18208180 | MS.gene79342:intron | 25.0% |
| !! | CACCTTAATTTGGTTAAAAT+GGG | - | chr3.1:18205106-18205125 | MS.gene79342:CDS | 25.0% |
| !! | CTTAACATTCACTCTTTTAT+TGG | + | chr3.1:18205415-18205434 | None:intergenic | 25.0% |
| !! | GAAATGTAGAATTTAGTTCA+TGG | - | chr3.1:18207696-18207715 | MS.gene79342:intron | 25.0% |
| !! | TAATTTGGTTAAAATGGGTT+TGG | - | chr3.1:18205111-18205130 | MS.gene79342:CDS | 25.0% |
| !! | TAGCCTTAAAAATTTCTTCT+CGG | - | chr3.1:18208363-18208382 | MS.gene79342:intron | 25.0% |
| !! | TCACCTTAATTTGGTTAAAA+TGG | - | chr3.1:18205105-18205124 | MS.gene79342:CDS | 25.0% |
| !! | TTAAGGTACCTAGTTAAAAT+GGG | - | chr3.1:18205292-18205311 | MS.gene79342:CDS | 25.0% |
| !! | TTTAAGGTACCTAGTTAAAA+TGG | - | chr3.1:18205291-18205310 | MS.gene79342:CDS | 25.0% |
| !! | TTTCCGAGAAGAAATTTTTA+AGG | + | chr3.1:18208369-18208388 | None:intergenic | 25.0% |
| !!! | AACCCATTTTAACCAAATTA+AGG | + | chr3.1:18205111-18205130 | None:intergenic | 25.0% |
| !!! | AATGGGATAATGTTTTTAGT+TGG | - | chr3.1:18207005-18207024 | MS.gene79342:intron | 25.0% |
| !!! | TGTTTGTTTTAGAAGGATTT+GGG | - | chr3.1:18206810-18206829 | MS.gene79342:intron | 25.0% |
| !!! | TTGTTTGTTTTAGAAGGATT+TGG | - | chr3.1:18206809-18206828 | MS.gene79342:intron | 25.0% |
| !!! | TTTCAGTTGTTTGTTTTAGA+AGG | - | chr3.1:18206803-18206822 | MS.gene79342:intron | 25.0% |
| AAGCTATTCTTGATAGACTA+AGG | + | chr3.1:18207666-18207685 | None:intergenic | 30.0% | |
| AAGGATTAATGTAGTAGTGA+TGG | - | chr3.1:18207626-18207645 | MS.gene79342:intron | 30.0% | |
| AATTTAGATTTCAATGGTGG+TGG | - | chr3.1:18207393-18207412 | MS.gene79342:intron | 30.0% | |
| ACATCAACAAAGAGACAAAA+AGG | + | chr3.1:18209139-18209158 | None:intergenic | 30.0% | |
| AGTTAACATACAGCAAATCA+AGG | + | chr3.1:18209353-18209372 | None:intergenic | 30.0% | |
| ATCCCTCCATTAATATATGT+AGG | + | chr3.1:18208934-18208953 | None:intergenic | 30.0% | |
| CATCAACAAAGAGACAAAAA+GGG | + | chr3.1:18209138-18209157 | None:intergenic | 30.0% | |
| CATGTTAACATATTTGGAGA+TGG | + | chr3.1:18209218-18209237 | None:intergenic | 30.0% | |
| CCTTTAGCAAAAAAAGTTGA+GGG | + | chr3.1:18206413-18206432 | None:intergenic | 30.0% | |
| CGTTTAAAGAAAACTTGGTT+TGG | - | chr3.1:18205926-18205945 | MS.gene79342:intron | 30.0% | |
| CTTATTAGCTGAAACTCATA+TGG | + | chr3.1:18205374-18205393 | None:intergenic | 30.0% | |
| GAGAATTTAGATTTCAATGG+TGG | - | chr3.1:18207390-18207409 | MS.gene79342:intron | 30.0% | |
| GCTGTTAGAAAACTTTATGT+TGG | - | chr3.1:18204328-18204347 | MS.gene79342:intron | 30.0% | |
| GGAACACATTTCTTAATTGT+GGG | + | chr3.1:18205334-18205353 | None:intergenic | 30.0% | |
| GTCTATCAAGAATAGCTTAA+AGG | - | chr3.1:18207668-18207687 | MS.gene79342:intron | 30.0% | |
| TAAGTTTGTGTTGTGAGTTA+GGG | + | chr3.1:18204200-18204219 | None:intergenic | 30.0% | |
| TATTCTTGATAGACTAAGGT+AGG | + | chr3.1:18207662-18207681 | None:intergenic | 30.0% | |
| TCAAAAAAACACAAGTCGTT+GGG | - | chr3.1:18205570-18205589 | MS.gene79342:intron | 30.0% | |
| TGATATAGTCCTACAATTTG+AGG | - | chr3.1:18209020-18209039 | MS.gene79342:intron | 30.0% | |
| TGGAACACATTTCTTAATTG+TGG | + | chr3.1:18205335-18205354 | None:intergenic | 30.0% | |
| TTAAGTTTGTGTTGTGAGTT+AGG | + | chr3.1:18204201-18204220 | None:intergenic | 30.0% | |
| TTATATGTCGCAAAACAGAA+CGG | + | chr3.1:18208843-18208862 | None:intergenic | 30.0% | |
| TTCAAAAAAACACAAGTCGT+TGG | - | chr3.1:18205569-18205588 | MS.gene79342:intron | 30.0% | |
| TTGCTTATTTAGTCTGTTTG+AGG | + | chr3.1:18206320-18206339 | None:intergenic | 30.0% | |
| TTTATCTCATGACAGCAAAT+TGG | - | chr3.1:18208202-18208221 | MS.gene79342:intron | 30.0% | |
| TTTCAGCATGCAAAATAAAC+AGG | + | chr3.1:18208537-18208556 | None:intergenic | 30.0% | |
| ! | AAAATGGGTTTGTTCAATGT+GGG | - | chr3.1:18205307-18205326 | MS.gene79342:CDS | 30.0% |
| ! | AAAGGTTCTAGCATCAAAAT+CGG | + | chr3.1:18206911-18206930 | None:intergenic | 30.0% |
| ! | ACATAAAGTTTTCTAACAGC+AGG | + | chr3.1:18204328-18204347 | None:intergenic | 30.0% |
| ! | ACTATTGTAATTTGTAGGTG+TGG | - | chr3.1:18206349-18206368 | MS.gene79342:intron | 30.0% |
| ! | ACTGTCTCTTAACTTGAATT+CGG | - | chr3.1:18206671-18206690 | MS.gene79342:intron | 30.0% |
| ! | ATAATGAGAGAAGCTTTTAG+TGG | - | chr3.1:18206455-18206474 | MS.gene79342:intron | 30.0% |
| ! | TAAAATGGGTTTGTTCAATG+TGG | - | chr3.1:18205306-18205325 | MS.gene79342:CDS | 30.0% |
| ! | TAATGAGAGAAGCTTTTAGT+GGG | - | chr3.1:18206456-18206475 | MS.gene79342:intron | 30.0% |
| ! | TCCTGTTGTTAAAGGTTTTT+CGG | + | chr3.1:18208254-18208273 | None:intergenic | 30.0% |
| ! | TCTGATTTTCCCATAGAATT+CGG | + | chr3.1:18206487-18206506 | None:intergenic | 30.0% |
| ! | TTAGCACTGAAGTATTTGAA+TGG | - | chr3.1:18206837-18206856 | MS.gene79342:intron | 30.0% |
| !! | AAACTTGGTTTGGTTAATGT+AGG | - | chr3.1:18205936-18205955 | MS.gene79342:intron | 30.0% |
| !! | AACAGTAAACTTGTTGTCAT+TGG | - | chr3.1:18207446-18207465 | MS.gene79342:intron | 30.0% |
| !! | ATTTGCTTATTTCTGTTAGG+GGG | - | chr3.1:18206860-18206879 | MS.gene79342:intron | 30.0% |
| !! | GATTTGCTTATTTCTGTTAG+GGG | - | chr3.1:18206859-18206878 | MS.gene79342:intron | 30.0% |
| !! | GGATTTGCTTATTTCTGTTA+GGG | - | chr3.1:18206858-18206877 | MS.gene79342:intron | 30.0% |
| !! | TGGATTTGCTTATTTCTGTT+AGG | - | chr3.1:18206857-18206876 | MS.gene79342:intron | 30.0% |
| !!! | TGAACAAACCCATTTTAACT+AGG | + | chr3.1:18205303-18205322 | None:intergenic | 30.0% |
| AACTGATTGGATGTTGGATT+GGG | - | chr3.1:18205045-18205064 | MS.gene79342:intron | 35.0% | |
| AAGATTGGCAAAATGTTAGC+AGG | - | chr3.1:18208729-18208748 | MS.gene79342:intron | 35.0% | |
| ACCATGTTCTTGAACAATCT+TGG | + | chr3.1:18204389-18204408 | None:intergenic | 35.0% | |
| ACCGAAAAACCTTTAACAAC+AGG | - | chr3.1:18208250-18208269 | MS.gene79342:intron | 35.0% | |
| AGCATGCAAAATAAACAGGA+AGG | + | chr3.1:18208533-18208552 | None:intergenic | 35.0% | |
| AGTCCTTACAAGGTATATGT+GGG | - | chr3.1:18208313-18208332 | MS.gene79342:intron | 35.0% | |
| ATATTAGTGTAACCTTTGCC+AGG | + | chr3.1:18207362-18207381 | None:intergenic | 35.0% | |
| ATGTACTTCTTACCAAAGCA+AGG | + | chr3.1:18207073-18207092 | None:intergenic | 35.0% | |
| ATTTGGGGACTCTATTCAAT+GGG | - | chr3.1:18209257-18209276 | MS.gene79342:CDS | 35.0% | |
| ATTTGTAGACAGTCCTTACA+AGG | - | chr3.1:18208303-18208322 | MS.gene79342:intron | 35.0% | |
| CACAAATGTGATGTTTATGC+GGG | + | chr3.1:18209090-18209109 | None:intergenic | 35.0% | |
| CCACAAATGTGATGTTTATG+CGG | + | chr3.1:18209091-18209110 | None:intergenic | 35.0% | |
| CCATGTACTTGAAGTATATC+AGG | + | chr3.1:18208563-18208582 | None:intergenic | 35.0% | |
| CCTGATATACTTCAAGTACA+TGG | - | chr3.1:18208560-18208579 | MS.gene79342:intron | 35.0% | |
| CTATCACCAACAAAACTCTT+GGG | - | chr3.1:18205071-18205090 | MS.gene79342:CDS | 35.0% | |
| CTCTTTGTAAATGATCACAC+AGG | + | chr3.1:18206245-18206264 | None:intergenic | 35.0% | |
| CTGTGTGATCATTTACAAAG+AGG | - | chr3.1:18206243-18206262 | MS.gene79342:intron | 35.0% | |
| GAAAAACCTTTAACAACAGG+AGG | - | chr3.1:18208253-18208272 | MS.gene79342:intron | 35.0% | |
| GAAATGTGTTCCACATAAAG+TGG | - | chr3.1:18205342-18205361 | MS.gene79342:CDS | 35.0% | |
| GCATGCAAAATAAACAGGAA+GGG | + | chr3.1:18208532-18208551 | None:intergenic | 35.0% | |
| GCCTTTAGCAAAAAAAGTTG+AGG | + | chr3.1:18206414-18206433 | None:intergenic | 35.0% | |
| GTAAACTGATGACAACTGAT+TGG | - | chr3.1:18205032-18205051 | MS.gene79342:intron | 35.0% | |
| GTCTTGAATTAGAACCTTAC+AGG | - | chr3.1:18206281-18206300 | MS.gene79342:intron | 35.0% | |
| GTTAACTGCAGTTGTTAGAA+GGG | - | chr3.1:18209366-18209385 | MS.gene79342:CDS | 35.0% | |
| GTTTGGAGAAGTAACTCTAA+CGG | + | chr3.1:18208588-18208607 | None:intergenic | 35.0% | |
| TAAGAGACAGTAAGAGAAAG+AGG | + | chr3.1:18206662-18206681 | None:intergenic | 35.0% | |
| TATAAGGTGAAACTGTTCAG+TGG | - | chr3.1:18207770-18207789 | MS.gene79342:intron | 35.0% | |
| TATATGTCGCAAAACAGAAC+GGG | + | chr3.1:18208842-18208861 | None:intergenic | 35.0% | |
| TATTAGTGTAACCTTTGCCA+GGG | + | chr3.1:18207361-18207380 | None:intergenic | 35.0% | |
| TCATCATTACTAACAGTACG+AGG | + | chr3.1:18204361-18204380 | None:intergenic | 35.0% | |
| TCTTGTCAACTCATATCCTT+AGG | + | chr3.1:18207858-18207877 | None:intergenic | 35.0% | |
| TGATAAGAAATCCAAACGGA+GGG | + | chr3.1:18208904-18208923 | None:intergenic | 35.0% | |
| TGCTAAAGGCAGAAAGAAAT+GGG | - | chr3.1:18206424-18206443 | MS.gene79342:intron | 35.0% | |
| TGTTAACTGCAGTTGTTAGA+AGG | - | chr3.1:18209365-18209384 | MS.gene79342:CDS | 35.0% | |
| TGTTACAATGAAAACCGTTG+AGG | - | chr3.1:18208049-18208068 | MS.gene79342:intron | 35.0% | |
| TGTTCAGTACATGTCATCAA+TGG | + | chr3.1:18207810-18207829 | None:intergenic | 35.0% | |
| TTCATGATCATCATCAAGCA+AGG | + | chr3.1:18208610-18208629 | None:intergenic | 35.0% | |
| TTGATAAGAAATCCAAACGG+AGG | + | chr3.1:18208905-18208924 | None:intergenic | 35.0% | |
| TTGCTAAAGGCAGAAAGAAA+TGG | - | chr3.1:18206423-18206442 | MS.gene79342:intron | 35.0% | |
| TTTCCCACATATACCTTGTA+AGG | + | chr3.1:18208319-18208338 | None:intergenic | 35.0% | |
| ! | ATGAGAGCAGCTATTTCATT+TGG | + | chr3.1:18209115-18209134 | None:intergenic | 35.0% |
| ! | ATTGTAATTTGTAGGTGTGG+TGG | - | chr3.1:18206352-18206371 | MS.gene79342:intron | 35.0% |
| ! | CTGTCTCTTAACTTGAATTC+GGG | - | chr3.1:18206672-18206691 | MS.gene79342:intron | 35.0% |
| ! | TTATGGCTGTTTATCCCTTT+TGG | - | chr3.1:18207113-18207132 | MS.gene79342:intron | 35.0% |
| ! | TTGAATTCGGGTATTTTCCA+CGG | - | chr3.1:18206684-18206703 | MS.gene79342:intron | 35.0% |
| !! | AAAGCTGAGGTACTTTTTGT+TGG | - | chr3.1:18204418-18204437 | MS.gene79342:intron | 35.0% |
| !! | GTATTATGCTGCTACTTTCA+TGG | - | chr3.1:18207043-18207062 | MS.gene79342:intron | 35.0% |
| !!! | AGTTTTGTTAGATCTCTCGA+GGG | - | chr3.1:18204670-18204689 | MS.gene79342:intron | 35.0% |
| !!! | CCCTCAACTTTTTTTGCTAA+AGG | - | chr3.1:18206410-18206429 | MS.gene79342:intron | 35.0% |
| !!! | TAGTTTTGTTAGATCTCTCG+AGG | - | chr3.1:18204669-18204688 | MS.gene79342:intron | 35.0% |
| !!! | TGTTGTCGTTTTGGGTTTTA+AGG | + | chr3.1:18204224-18204243 | None:intergenic | 35.0% |
| AAAAGTAATAGCGGCTTTGC+AGG | - | chr3.1:18205884-18205903 | MS.gene79342:intron | 40.0% | |
| AATTGAAAGATCTCTCACCG+TGG | + | chr3.1:18206704-18206723 | None:intergenic | 40.0% | |
| ACACGACACATATTTGACAC+CGG | - | chr3.1:18204792-18204811 | MS.gene79342:intron | 40.0% | |
| ACAGTAAGAGAAAGAGGAAG+AGG | + | chr3.1:18206656-18206675 | None:intergenic | 40.0% | |
| ACCTCAAAATCCAGTGGTTT+CGG | - | chr3.1:18208430-18208449 | MS.gene79342:intron | 40.0% | |
| AGCAAAAAAAGTTGAGGGAG+AGG | + | chr3.1:18206408-18206427 | None:intergenic | 40.0% | |
| ATCTCATGACAGCAAATTGG+AGG | - | chr3.1:18208205-18208224 | MS.gene79342:intron | 40.0% | |
| ATCTTGTCTTGCAGACCAAA+AGG | + | chr3.1:18207131-18207150 | None:intergenic | 40.0% | |
| ATGGGTTTGACCACTTTATG+TGG | + | chr3.1:18205355-18205374 | None:intergenic | 40.0% | |
| CAACTGATTGGATGTTGGAT+TGG | - | chr3.1:18205044-18205063 | MS.gene79342:intron | 40.0% | |
| CAAGGTATATGTGGGAAATC+TGG | - | chr3.1:18208321-18208340 | MS.gene79342:intron | 40.0% | |
| CAGTCCTTACAAGGTATATG+TGG | - | chr3.1:18208312-18208331 | MS.gene79342:intron | 40.0% | |
| CATAGACTAATCTCTCATGC+TGG | + | chr3.1:18204870-18204889 | None:intergenic | 40.0% | |
| CCATTAATGTGCGATGCAAA+TGG | + | chr3.1:18207229-18207248 | None:intergenic | 40.0% | |
| CCATTTGCATCGCACATTAA+TGG | - | chr3.1:18207226-18207245 | MS.gene79342:intron | 40.0% | |
| CCGCATAAACATCACATTTG+TGG | - | chr3.1:18209088-18209107 | MS.gene79342:intron | 40.0% | |
| CCTATCACCAACAAAACTCT+TGG | - | chr3.1:18205070-18205089 | MS.gene79342:CDS | 40.0% | |
| CTACCATAAACCCTTCTAGT+AGG | + | chr3.1:18208758-18208777 | None:intergenic | 40.0% | |
| CTTCCTACTAGAAGGGTTTA+TGG | - | chr3.1:18208752-18208771 | MS.gene79342:intron | 40.0% | |
| CTTGATGCACTCGATATTTG+TGG | + | chr3.1:18207951-18207970 | None:intergenic | 40.0% | |
| GATCATCATCAAGCAAGGTT+TGG | + | chr3.1:18208605-18208624 | None:intergenic | 40.0% | |
| GATGACAACTGATTGGATGT+TGG | - | chr3.1:18205039-18205058 | MS.gene79342:intron | 40.0% | |
| GATTTGGGGACTCTATTCAA+TGG | - | chr3.1:18209256-18209275 | MS.gene79342:CDS | 40.0% | |
| GCAAAAAAAGTTGAGGGAGA+GGG | + | chr3.1:18206407-18206426 | None:intergenic | 40.0% | |
| GCAGAAAATCCGAGTGAATA+AGG | - | chr3.1:18209388-18209407 | MS.gene79342:CDS | 40.0% | |
| GCAGTTTCAAGAACTTGAAC+CGG | + | chr3.1:18207484-18207503 | None:intergenic | 40.0% | |
| GCCAAGATTGTTCAAGAACA+TGG | - | chr3.1:18204385-18204404 | MS.gene79342:intron | 40.0% | |
| GTAAGGACTGTCTACAAATG+CGG | + | chr3.1:18208302-18208321 | None:intergenic | 40.0% | |
| TCTCATGACAGCAAATTGGA+GGG | - | chr3.1:18208206-18208225 | MS.gene79342:intron | 40.0% | |
| TCTTGTCTTGCAGACCAAAA+GGG | + | chr3.1:18207130-18207149 | None:intergenic | 40.0% | |
| TGGTCTGCAAGACAAGATTA+AGG | - | chr3.1:18207133-18207152 | MS.gene79342:intron | 40.0% | |
| TGTACTGAACAATGCCATGT+AGG | - | chr3.1:18207819-18207838 | MS.gene79342:intron | 40.0% | |
| TGTTGTTCTCATTCTCAGAG+TGG | - | chr3.1:18206055-18206074 | MS.gene79342:intron | 40.0% | |
| TGTTTCTTCTGAACAAGCCA+CGG | - | chr3.1:18204294-18204313 | MS.gene79342:intron | 40.0% | |
| TTAACCGGAGATTCTGGATT+CGG | - | chr3.1:18204630-18204649 | MS.gene79342:intron | 40.0% | |
| TTTCATGGAGAACCTTGCTT+TGG | - | chr3.1:18207058-18207077 | MS.gene79342:intron | 40.0% | |
| ! | CTTGTTGTCATTGGACTGAA+AGG | - | chr3.1:18207455-18207474 | MS.gene79342:intron | 40.0% |
| ! | GTGGAGTGTTCACCTTAATT+TGG | - | chr3.1:18205096-18205115 | MS.gene79342:CDS | 40.0% |
| ! | TTACCCTGTGTTTTACACAG+AGG | + | chr3.1:18207506-18207525 | None:intergenic | 40.0% |
| !! | GCATGAGAGATTAGTCTATG+TGG | - | chr3.1:18204870-18204889 | MS.gene79342:intron | 40.0% |
| !! | GTTTTGTTAGATCTCTCGAG+GGG | - | chr3.1:18204671-18204690 | MS.gene79342:intron | 40.0% |
| !! | TGGGAAGTACCGAATTCTAT+GGG | - | chr3.1:18206475-18206494 | MS.gene79342:intron | 40.0% |
| !! | TTAGATTTCAATGGTGGTGG+TGG | - | chr3.1:18207396-18207415 | MS.gene79342:intron | 40.0% |
| !!! | AGAAGGTGTTGTTGTCGTTT+TGG | + | chr3.1:18204233-18204252 | None:intergenic | 40.0% |
| !!! | CCAAGAGTTTTGTTGGTGAT+AGG | + | chr3.1:18205073-18205092 | None:intergenic | 40.0% |
| !!! | GAAGGTGTTGTTGTCGTTTT+GGG | + | chr3.1:18204232-18204251 | None:intergenic | 40.0% |
| AACACACCTTATCTGAGGAG+TGG | - | chr3.1:18204815-18204834 | MS.gene79342:intron | 45.0% | |
| AAGAAATCCAAACGGAGGGA+CGG | + | chr3.1:18208900-18208919 | None:intergenic | 45.0% | |
| AAGATGATTCACCTCGCACA+AGG | + | chr3.1:18205218-18205237 | None:intergenic | 45.0% | |
| AATCTCCGGTTAAGCTGGAA+CGG | + | chr3.1:18204623-18204642 | None:intergenic | 45.0% | |
| AATTCTGTTAAAGGGCAGCC+CGG | + | chr3.1:18207596-18207615 | None:intergenic | 45.0% | |
| ACACAACCACTCCTCAGATA+AGG | + | chr3.1:18204824-18204843 | None:intergenic | 45.0% | |
| ACTGCCTCTGTGTAAAACAC+AGG | - | chr3.1:18207499-18207518 | MS.gene79342:intron | 45.0% | |
| ACTGCTCACAATGCACCAAA+TGG | - | chr3.1:18207527-18207546 | MS.gene79342:intron | 45.0% | |
| AGCAAATGCTCTTAGTGCCA+AGG | - | chr3.1:18208390-18208409 | MS.gene79342:intron | 45.0% | |
| AGTAACAAAGCCGAAACCAC+TGG | + | chr3.1:18208443-18208462 | None:intergenic | 45.0% | |
| ATACCAAAGCCAAACCCCTT+TGG | + | chr3.1:18206606-18206625 | None:intergenic | 45.0% | |
| CCAACAAAACTCTTGGGTAG+TGG | - | chr3.1:18205077-18205096 | MS.gene79342:CDS | 45.0% | |
| CTCTTAGTGCCAAGGTTTCA+CGG | - | chr3.1:18208398-18208417 | MS.gene79342:intron | 45.0% | |
| CTGCCTCTGTGTAAAACACA+GGG | - | chr3.1:18207500-18207519 | MS.gene79342:intron | 45.0% | |
| GAATCCGAATCCAGAATCTC+CGG | + | chr3.1:18204637-18204656 | None:intergenic | 45.0% | |
| GCTTTCTAATGCAGCCTGTA+AGG | + | chr3.1:18206298-18206317 | None:intergenic | 45.0% | |
| GGCAAACCTCCTGTTGTTAA+AGG | + | chr3.1:18208262-18208281 | None:intergenic | 45.0% | |
| GTCTACAAATGCGGATTCCT+CGG | + | chr3.1:18208293-18208312 | None:intergenic | 45.0% | |
| TAGCAGGCTTCCTACTAGAA+GGG | - | chr3.1:18208745-18208764 | MS.gene79342:intron | 45.0% | |
| TATGCGGGAACTTGTGATGA+TGG | + | chr3.1:18209075-18209094 | None:intergenic | 45.0% | |
| TCATTGGACTGAAAGGTCAC+CGG | - | chr3.1:18207462-18207481 | MS.gene79342:intron | 45.0% | |
| TCCTCAGATAAGGTGTGTTC+CGG | + | chr3.1:18204814-18204833 | None:intergenic | 45.0% | |
| TCTTAGTGCCAAGGTTTCAC+GGG | - | chr3.1:18208399-18208418 | MS.gene79342:intron | 45.0% | |
| TTAGCAGGCTTCCTACTAGA+AGG | - | chr3.1:18208744-18208763 | MS.gene79342:intron | 45.0% | |
| TTGTGTTGTGAGTTAGGGAG+AGG | + | chr3.1:18204195-18204214 | None:intergenic | 45.0% | |
| ! | ATTTGTTTGACCAAGAGCGC+TGG | - | chr3.1:18204595-18204614 | MS.gene79342:intron | 45.0% |
| ! | CCACACTCTTTTCACCAAAG+GGG | - | chr3.1:18206589-18206608 | MS.gene79342:intron | 45.0% |
| ! | CTCTTTTCACCAAAGGGGTT+TGG | - | chr3.1:18206594-18206613 | MS.gene79342:intron | 45.0% |
| ! | CTTTGGTGAAAAGAGTGTGG+CGG | + | chr3.1:18206589-18206608 | None:intergenic | 45.0% |
| ! | GCCACACTCTTTTCACCAAA+GGG | - | chr3.1:18206588-18206607 | MS.gene79342:intron | 45.0% |
| ! | TGTAGTAGTGATGGTGAGTC+AGG | - | chr3.1:18207635-18207654 | MS.gene79342:intron | 45.0% |
| !! | CCACTACCCAAGAGTTTTGT+TGG | + | chr3.1:18205080-18205099 | None:intergenic | 45.0% |
| !! | CTACAAAGGGCGTCTAAGAT+TGG | - | chr3.1:18208714-18208733 | MS.gene79342:intron | 45.0% |
| !! | GCTTATTTCTGTTAGGGGGA+GGG | - | chr3.1:18206864-18206883 | MS.gene79342:intron | 45.0% |
| !! | GTGGGAAGTACCGAATTCTA+TGG | - | chr3.1:18206474-18206493 | MS.gene79342:intron | 45.0% |
| !! | GTTTTGTTGCAGGAAGAGAG+TGG | - | chr3.1:18207266-18207285 | MS.gene79342:intron | 45.0% |
| !! | TGCTTATTTCTGTTAGGGGG+AGG | - | chr3.1:18206863-18206882 | MS.gene79342:intron | 45.0% |
| !! | TGGTGCTGTTGAAAAAGCTG+AGG | - | chr3.1:18204405-18204424 | MS.gene79342:intron | 45.0% |
| AACAGCAGGAGAATCAACCG+TGG | + | chr3.1:18204314-18204333 | None:intergenic | 50.0% | |
| AACGACGTGTCGTAACGACA+AGG | + | chr3.1:18204258-18204277 | None:intergenic | 50.0% | |
| ACCGGAACACACCTTATCTG+AGG | - | chr3.1:18204810-18204829 | MS.gene79342:intron | 50.0% | |
| ACGACGTGTCGTAACGACAA+GGG | + | chr3.1:18204257-18204276 | None:intergenic | 50.0% | |
| CCCCTTTGGTGAAAAGAGTG+TGG | + | chr3.1:18206592-18206611 | None:intergenic | 50.0% | |
| CTCACAATGCACCAAATGGC+GGG | - | chr3.1:18207531-18207550 | MS.gene79342:intron | 50.0% | |
| CTTTGCCAGGGAGAGAAAAC+AGG | + | chr3.1:18207349-18207368 | None:intergenic | 50.0% | |
| GCAGCAGCTGAGAAACTCAA+TGG | - | chr3.1:18208080-18208099 | MS.gene79342:intron | 50.0% | |
| GCATCGCACATTAATGGTGC+TGG | - | chr3.1:18207232-18207251 | MS.gene79342:intron | 50.0% | |
| GCTCACAATGCACCAAATGG+CGG | - | chr3.1:18207530-18207549 | MS.gene79342:intron | 50.0% | |
| GTCAGTGTCCGTGCTTCATT+GGG | + | chr3.1:18204706-18204725 | None:intergenic | 50.0% | |
| GTCGTAACGACAAGGGAAGA+AGG | + | chr3.1:18204250-18204269 | None:intergenic | 50.0% | |
| TCCAGAATCTCCGGTTAAGC+TGG | + | chr3.1:18204628-18204647 | None:intergenic | 50.0% | |
| TCCAGCTTAACCGGAGATTC+TGG | - | chr3.1:18204624-18204643 | MS.gene79342:intron | 50.0% | |
| TCTGGCAGTGAAACAGTAGC+TGG | - | chr3.1:18207190-18207209 | MS.gene79342:intron | 50.0% | |
| TGCTGCGTTTGCATCCTCAA+CGG | + | chr3.1:18208066-18208085 | None:intergenic | 50.0% | |
| TGGTTCCGTTCCAGCTTAAC+CGG | - | chr3.1:18204615-18204634 | MS.gene79342:intron | 50.0% | |
| TGTCAGTGTCCGTGCTTCAT+TGG | + | chr3.1:18204707-18204726 | None:intergenic | 50.0% | |
| ! | CGCCACACTCTTTTCACCAA+AGG | - | chr3.1:18206587-18206606 | MS.gene79342:intron | 50.0% |
| ! | CTGTTTTCTCTCCCTGGCAA+AGG | - | chr3.1:18207347-18207366 | MS.gene79342:intron | 50.0% |
| ! | CTTTTAGCACACCTTGTGCG+AGG | - | chr3.1:18205204-18205223 | MS.gene79342:CDS | 50.0% |
| ! | GCCGAAACCACTGGATTTTG+AGG | + | chr3.1:18208434-18208453 | None:intergenic | 50.0% |
| ! | TCACCAAAGGGGTTTGGCTT+TGG | - | chr3.1:18206600-18206619 | MS.gene79342:intron | 50.0% |
| !! | CAAAAGTGCCATTCGCACCA+CGG | - | chr3.1:18207160-18207179 | MS.gene79342:intron | 50.0% |
| !! | GATTTCAATGGTGGTGGTGG+TGG | - | chr3.1:18207399-18207418 | MS.gene79342:intron | 50.0% |
| !! | TGTTGGTGTCGTGTCAGTGT+TGG | - | chr3.1:18204769-18204788 | MS.gene79342:intron | 50.0% |
| AACAGGAGGTTTGCCAGTCC+AGG | - | chr3.1:18208267-18208286 | MS.gene79342:intron | 55.0% | |
| ACAAAGCTCCCGCCTATGCA+GGG | + | chr3.1:18207570-18207589 | None:intergenic | 55.0% | |
| AGATACGACCGTGGTGCGAA+TGG | + | chr3.1:18207171-18207190 | None:intergenic | 55.0% | |
| AGTGTCCGTGCTTCATTGGG+CGG | + | chr3.1:18204703-18204722 | None:intergenic | 55.0% | |
| CAGTAGCTGGTCGTCAGTTG+AGG | - | chr3.1:18207203-18207222 | MS.gene79342:intron | 55.0% | |
| CCAAGGTTTCACGGGTTCCT+GGG | - | chr3.1:18208407-18208426 | MS.gene79342:intron | 55.0% | |
| CCTGGGACCTCAAAATCCAG+TGG | - | chr3.1:18208424-18208443 | MS.gene79342:intron | 55.0% | |
| GTTTGCCGCCCAATGAAGCA+CGG | - | chr3.1:18204695-18204714 | MS.gene79342:intron | 55.0% | |
| ! | CACGTCCTGTTTTCTCTCCC+TGG | - | chr3.1:18207341-18207360 | MS.gene79342:intron | 55.0% |
| !! | AATGGTGCTGGTGCAGCACT+GGG | - | chr3.1:18207244-18207263 | MS.gene79342:intron | 55.0% |
| !! | TAATGGTGCTGGTGCAGCAC+TGG | - | chr3.1:18207243-18207262 | MS.gene79342:intron | 55.0% |
| !! | TTCAATGGTGGTGGTGGTGG+TGG | - | chr3.1:18207402-18207421 | MS.gene79342:intron | 55.0% |
| !!! | CCACTGGATTTTGAGGTCCC+AGG | + | chr3.1:18208427-18208446 | None:intergenic | 55.0% |
| !!! | GCAGCACTGGGTTTTGTTGC+AGG | - | chr3.1:18207256-18207275 | MS.gene79342:intron | 55.0% |
| ATCTGGTCCGTCCCTCCGTT+TGG | - | chr3.1:18208890-18208909 | MS.gene79342:intron | 60.0% | |
| CAAATGCGGATTCCTCGGCC+TGG | + | chr3.1:18208288-18208307 | None:intergenic | 60.0% | |
| CACAAAGCTCCCGCCTATGC+AGG | + | chr3.1:18207571-18207590 | None:intergenic | 60.0% | |
| CACTGCCAGAGATACGACCG+TGG | + | chr3.1:18207180-18207199 | None:intergenic | 60.0% | |
| CCCAGGAACCCGTGAAACCT+TGG | + | chr3.1:18208410-18208429 | None:intergenic | 60.0% | |
| CCTATGCAGGGTCTGGGAAG+GGG | + | chr3.1:18207558-18207577 | None:intergenic | 60.0% | |
| CTTCCCAGACCCTGCATAGG+CGG | - | chr3.1:18207558-18207577 | MS.gene79342:intron | 60.0% | |
| GCCAAGGTTTCACGGGTTCC+TGG | - | chr3.1:18208406-18208425 | MS.gene79342:intron | 60.0% | |
| GCCTATGCAGGGTCTGGGAA+GGG | + | chr3.1:18207559-18207578 | None:intergenic | 60.0% | |
| TCGCACCACGGTCGTATCTC+TGG | - | chr3.1:18207172-18207191 | MS.gene79342:intron | 60.0% | |
| TGGAACGGAACCAGCGCTCT+TGG | + | chr3.1:18204608-18204627 | None:intergenic | 60.0% | |
| TTCCCAGACCCTGCATAGGC+GGG | - | chr3.1:18207559-18207578 | MS.gene79342:intron | 60.0% | |
| ! | TAGGCGGGAGCTTTGTGCAC+CGG | - | chr3.1:18207574-18207593 | MS.gene79342:intron | 60.0% |
| !! | AATGGTGGTGGTGGTGGTGG+TGG | - | chr3.1:18207405-18207424 | MS.gene79342:intron | 60.0% |
| !! | ATGGTGGTGGTGGTGGTGGT+GGG | - | chr3.1:18207406-18207425 | MS.gene79342:intron | 60.0% |
| AGGTTTGCCAGTCCAGGCCG+AGG | - | chr3.1:18208273-18208292 | MS.gene79342:intron | 65.0% | |
| CCCCTTCCCAGACCCTGCAT+AGG | - | chr3.1:18207555-18207574 | MS.gene79342:intron | 65.0% | |
| CGCCTATGCAGGGTCTGGGA+AGG | + | chr3.1:18207560-18207579 | None:intergenic | 65.0% | |
| CTCCCGCCTATGCAGGGTCT+GGG | + | chr3.1:18207564-18207583 | None:intergenic | 65.0% | |
| TGGGAAGGGGTCCCGCCATT+TGG | + | chr3.1:18207545-18207564 | None:intergenic | 65.0% | |
| ! | AGGCGGGAGCTTTGTGCACC+GGG | - | chr3.1:18207575-18207594 | MS.gene79342:intron | 65.0% |
| !! | TGGTGGTGGTGGTGGTGGGT+GGG | - | chr3.1:18207410-18207429 | MS.gene79342:intron | 65.0% |
| GCGGATTCCTCGGCCTGGAC+TGG | + | chr3.1:18208283-18208302 | None:intergenic | 70.0% | |
| GCTCCCGCCTATGCAGGGTC+TGG | + | chr3.1:18207565-18207584 | None:intergenic | 70.0% | |
| !! | GGTGGTGGTGGTGGTGGGTG+GGG | - | chr3.1:18207411-18207430 | MS.gene79342:intron | 70.0% |
| !! | GTGGTGGTGGTGGTGGGTGG+GGG | - | chr3.1:18207412-18207431 | MS.gene79342:intron | 70.0% |
| !! | GTGGTGGTGGTGGTGGTGGG+TGG | - | chr3.1:18207409-18207428 | MS.gene79342:intron | 70.0% |
| !! | TGGTGGTGGTGGTGGGTGGG+GGG | - | chr3.1:18207413-18207432 | MS.gene79342:intron | 70.0% |
| !! | GGTGGTGGGTGGGGGGGGAT+TGG | - | chr3.1:18207420-18207439 | MS.gene79342:intron | 75.0% |
| !! | GGTGGTGGTGGTGGGTGGGG+GGG | - | chr3.1:18207414-18207433 | MS.gene79342:intron | 75.0% |
| !! | GTGGTGGTGGTGGGTGGGGG+GGG | - | chr3.1:18207415-18207434 | MS.gene79342:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 18204163 | 18209415 | 18204163 | ID=MS.gene79342 |
| chr3.1 | mRNA | 18204163 | 18209415 | 18204163 | ID=MS.gene79342.t1;Parent=MS.gene79342 |
| chr3.1 | exon | 18209152 | 18209415 | 18209152 | ID=MS.gene79342.t1.exon1;Parent=MS.gene79342.t1 |
| chr3.1 | CDS | 18209152 | 18209415 | 18209152 | ID=cds.MS.gene79342.t1;Parent=MS.gene79342.t1 |
| chr3.1 | exon | 18205472 | 18205573 | 18205472 | ID=MS.gene79342.t1.exon2;Parent=MS.gene79342.t1 |
| chr3.1 | CDS | 18205472 | 18205573 | 18205472 | ID=cds.MS.gene79342.t1;Parent=MS.gene79342.t1 |
| chr3.1 | exon | 18205065 | 18205361 | 18205065 | ID=MS.gene79342.t1.exon3;Parent=MS.gene79342.t1 |
| chr3.1 | CDS | 18205065 | 18205361 | 18205065 | ID=cds.MS.gene79342.t1;Parent=MS.gene79342.t1 |
| chr3.1 | exon | 18204163 | 18204201 | 18204163 | ID=MS.gene79342.t1.exon4;Parent=MS.gene79342.t1 |
| chr3.1 | CDS | 18204163 | 18204201 | 18204163 | ID=cds.MS.gene79342.t1;Parent=MS.gene79342.t1 |
| Gene Sequence |
| Protein sequence |
