Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65665.t1 | XP_003614593.1 | 98 | 440 | 9 | 0 | 1 | 440 | 103 | 542 | 4.50E-243 | 850.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65665.t1 | Q9FV81 | 81.4 | 440 | 82 | 0 | 1 | 440 | 109 | 548 | 1.1e-213 | 743.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65665.t1 | G7K0I2 | 98.0 | 440 | 9 | 0 | 1 | 440 | 103 | 542 | 3.3e-243 | 850.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049134 | MS.gene65665 | -0.808713 | 2.71E-50 | -1.69E-46 |
| MS.gene049150 | MS.gene65665 | 0.845731 | 3.38E-59 | -1.69E-46 |
| MS.gene049151 | MS.gene65665 | 0.828432 | 9.02E-55 | -1.69E-46 |
| MS.gene049153 | MS.gene65665 | 0.848716 | 5.13E-60 | -1.69E-46 |
| MS.gene049195 | MS.gene65665 | 0.839305 | 1.72E-57 | -1.69E-46 |
| MS.gene049260 | MS.gene65665 | 0.841462 | 4.68E-58 | -1.69E-46 |
| MS.gene049284 | MS.gene65665 | 0.810307 | 1.23E-50 | -1.69E-46 |
| MS.gene049297 | MS.gene65665 | 0.864663 | 1.03E-64 | -1.69E-46 |
| MS.gene04933 | MS.gene65665 | 0.838914 | 2.17E-57 | -1.69E-46 |
| MS.gene049346 | MS.gene65665 | 0.852471 | 4.52E-61 | -1.69E-46 |
| MS.gene049351 | MS.gene65665 | 0.859162 | 5.01E-63 | -1.69E-46 |
| MS.gene049378 | MS.gene65665 | 0.825044 | 5.81E-54 | -1.69E-46 |
| MS.gene049389 | MS.gene65665 | 0.831145 | 1.97E-55 | -1.69E-46 |
| MS.gene049426 | MS.gene65665 | 0.821154 | 4.69E-53 | -1.69E-46 |
| MS.gene049491 | MS.gene65665 | 0.845782 | 3.28E-59 | -1.69E-46 |
| MS.gene049599 | MS.gene65665 | -0.836368 | 9.75E-57 | -1.69E-46 |
| MS.gene049661 | MS.gene65665 | 0.820458 | 6.79E-53 | -1.69E-46 |
| MS.gene049662 | MS.gene65665 | 0.826386 | 2.79E-54 | -1.69E-46 |
| MS.gene049681 | MS.gene65665 | 0.811155 | 8.06E-51 | -1.69E-46 |
| MS.gene049758 | MS.gene65665 | 0.9234 | 2.79E-89 | -1.69E-46 |
| MS.gene049910 | MS.gene65665 | 0.876074 | 1.86E-68 | -1.69E-46 |
| MS.gene049915 | MS.gene65665 | 0.836322 | 1.00E-56 | -1.69E-46 |
| MS.gene050076 | MS.gene65665 | 0.84133 | 5.07E-58 | -1.69E-46 |
| MS.gene050099 | MS.gene65665 | 0.853375 | 2.49E-61 | -1.69E-46 |
| MS.gene050128 | MS.gene65665 | 0.841426 | 4.79E-58 | -1.69E-46 |
| MS.gene050168 | MS.gene65665 | 0.824687 | 7.05E-54 | -1.69E-46 |
| MS.gene050226 | MS.gene65665 | 0.851407 | 9.06E-61 | -1.69E-46 |
| MS.gene050227 | MS.gene65665 | 0.857073 | 2.09E-62 | -1.69E-46 |
| MS.gene050228 | MS.gene65665 | 0.845084 | 5.06E-59 | -1.69E-46 |
| MS.gene050231 | MS.gene65665 | 0.808216 | 3.45E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene65665 | 0.927092 | 1.90E-91 | -1.69E-46 |
| MS.gene050319 | MS.gene65665 | -0.833613 | 4.82E-56 | -1.69E-46 |
| MS.gene050330 | MS.gene65665 | -0.86043 | 2.08E-63 | -1.69E-46 |
| MS.gene050397 | MS.gene65665 | 0.873664 | 1.23E-67 | -1.69E-46 |
| MS.gene050406 | MS.gene65665 | 0.808158 | 3.55E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene65665 | 0.821139 | 4.73E-53 | -1.69E-46 |
| MS.gene050438 | MS.gene65665 | 0.821482 | 3.94E-53 | -1.69E-46 |
| MS.gene050464 | MS.gene65665 | 0.860244 | 2.36E-63 | -1.69E-46 |
| MS.gene050516 | MS.gene65665 | 0.819935 | 8.94E-53 | -1.69E-46 |
| MS.gene050529 | MS.gene65665 | 0.853276 | 2.66E-61 | -1.69E-46 |
| MS.gene050558 | MS.gene65665 | 0.88288 | 7.19E-71 | -1.69E-46 |
| MS.gene050560 | MS.gene65665 | 0.834933 | 2.25E-56 | -1.69E-46 |
| MS.gene050623 | MS.gene65665 | -0.847816 | 9.10E-60 | -1.69E-46 |
| MS.gene050642 | MS.gene65665 | 0.856559 | 2.96E-62 | -1.69E-46 |
| MS.gene050650 | MS.gene65665 | 0.846406 | 2.22E-59 | -1.69E-46 |
| MS.gene050670 | MS.gene65665 | 0.849718 | 2.70E-60 | -1.69E-46 |
| MS.gene050762 | MS.gene65665 | 0.804169 | 2.46E-49 | -1.69E-46 |
| MS.gene050763 | MS.gene65665 | 0.80674 | 7.10E-50 | -1.69E-46 |
| MS.gene050787 | MS.gene65665 | 0.832894 | 7.29E-56 | -1.69E-46 |
| MS.gene050820 | MS.gene65665 | 0.835644 | 1.49E-56 | -1.69E-46 |
| MS.gene05101 | MS.gene65665 | 0.876194 | 1.69E-68 | -1.69E-46 |
| MS.gene05119 | MS.gene65665 | -0.867601 | 1.21E-65 | -1.69E-46 |
| MS.gene051257 | MS.gene65665 | 0.814663 | 1.37E-51 | -1.69E-46 |
| MS.gene051471 | MS.gene65665 | 0.863487 | 2.40E-64 | -1.69E-46 |
| MS.gene051525 | MS.gene65665 | 0.818142 | 2.29E-52 | -1.69E-46 |
| MS.gene051582 | MS.gene65665 | 0.878916 | 1.91E-69 | -1.69E-46 |
| MS.gene051662 | MS.gene65665 | 0.866941 | 1.97E-65 | -1.69E-46 |
| MS.gene051663 | MS.gene65665 | 0.899537 | 1.80E-77 | -1.69E-46 |
| MS.gene051860 | MS.gene65665 | 0.910934 | 1.07E-82 | -1.69E-46 |
| MS.gene051877 | MS.gene65665 | 0.816416 | 5.59E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene65665 | 0.865494 | 5.67E-65 | -1.69E-46 |
| MS.gene052011 | MS.gene65665 | -0.84039 | 8.95E-58 | -1.69E-46 |
| MS.gene052025 | MS.gene65665 | 0.809936 | 1.48E-50 | -1.69E-46 |
| MS.gene052077 | MS.gene65665 | 0.857082 | 2.08E-62 | -1.69E-46 |
| MS.gene052078 | MS.gene65665 | 0.869737 | 2.47E-66 | -1.69E-46 |
| MS.gene052176 | MS.gene65665 | 0.811212 | 7.84E-51 | -1.69E-46 |
| MS.gene052178 | MS.gene65665 | 0.856657 | 2.77E-62 | -1.69E-46 |
| MS.gene052188 | MS.gene65665 | 0.870938 | 9.99E-67 | -1.69E-46 |
| MS.gene052207 | MS.gene65665 | 0.877611 | 5.47E-69 | -1.69E-46 |
| MS.gene052253 | MS.gene65665 | 0.879665 | 1.03E-69 | -1.69E-46 |
| MS.gene052255 | MS.gene65665 | 0.829618 | 4.65E-55 | -1.69E-46 |
| MS.gene052309 | MS.gene65665 | -0.821425 | 4.06E-53 | -1.69E-46 |
| MS.gene052310 | MS.gene65665 | 0.857929 | 1.17E-62 | -1.69E-46 |
| MS.gene052326 | MS.gene65665 | 0.851883 | 6.64E-61 | -1.69E-46 |
| MS.gene052340 | MS.gene65665 | 0.870101 | 1.88E-66 | -1.69E-46 |
| MS.gene052344 | MS.gene65665 | -0.80426 | 2.35E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene65665 | 0.803363 | 3.61E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene65665 | 0.841273 | 5.25E-58 | -1.69E-46 |
| MS.gene052600 | MS.gene65665 | 0.81783 | 2.69E-52 | -1.69E-46 |
| MS.gene05316 | MS.gene65665 | 0.810052 | 1.40E-50 | -1.69E-46 |
| MS.gene053184 | MS.gene65665 | 0.822858 | 1.89E-53 | -1.69E-46 |
| MS.gene053209 | MS.gene65665 | 0.837491 | 5.04E-57 | -1.69E-46 |
| MS.gene053557 | MS.gene65665 | 0.855107 | 7.87E-62 | -1.69E-46 |
| MS.gene053559 | MS.gene65665 | 0.825406 | 4.77E-54 | -1.69E-46 |
| MS.gene053577 | MS.gene65665 | 0.804242 | 2.37E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene65665 | 0.961445 | 1.04E-119 | -1.69E-46 |
| MS.gene053907 | MS.gene65665 | 0.86059 | 1.86E-63 | -1.69E-46 |
| MS.gene053928 | MS.gene65665 | 0.828627 | 8.09E-55 | -1.69E-46 |
| MS.gene053971 | MS.gene65665 | 0.82152 | 3.86E-53 | -1.69E-46 |
| MS.gene054010 | MS.gene65665 | 0.832568 | 8.78E-56 | -1.69E-46 |
| MS.gene054011 | MS.gene65665 | 0.851029 | 1.16E-60 | -1.69E-46 |
| MS.gene054012 | MS.gene65665 | 0.837636 | 4.63E-57 | -1.69E-46 |
| MS.gene054013 | MS.gene65665 | 0.831979 | 1.23E-55 | -1.69E-46 |
| MS.gene054123 | MS.gene65665 | 0.849771 | 2.61E-60 | -1.69E-46 |
| MS.gene054183 | MS.gene65665 | 0.83669 | 8.07E-57 | -1.69E-46 |
| MS.gene054184 | MS.gene65665 | 0.8067 | 7.24E-50 | -1.69E-46 |
| MS.gene054185 | MS.gene65665 | 0.813286 | 2.76E-51 | -1.69E-46 |
| MS.gene054349 | MS.gene65665 | 0.809592 | 1.75E-50 | -1.69E-46 |
| MS.gene054379 | MS.gene65665 | 0.813749 | 2.19E-51 | -1.69E-46 |
| MS.gene054473 | MS.gene65665 | 0.90201 | 1.50E-78 | -1.69E-46 |
| MS.gene054542 | MS.gene65665 | 0.832692 | 8.17E-56 | -1.69E-46 |
| MS.gene05455 | MS.gene65665 | 0.862592 | 4.54E-64 | -1.69E-46 |
| MS.gene054667 | MS.gene65665 | 0.838303 | 3.12E-57 | -1.69E-46 |
| MS.gene054719 | MS.gene65665 | 0.800779 | 1.23E-48 | -1.69E-46 |
| MS.gene054918 | MS.gene65665 | 0.826583 | 2.51E-54 | -1.69E-46 |
| MS.gene054930 | MS.gene65665 | 0.881871 | 1.67E-70 | -1.69E-46 |
| MS.gene054942 | MS.gene65665 | 0.883661 | 3.71E-71 | -1.69E-46 |
| MS.gene054983 | MS.gene65665 | 0.885466 | 7.94E-72 | -1.69E-46 |
| MS.gene055116 | MS.gene65665 | 0.853699 | 2.01E-61 | -1.69E-46 |
| MS.gene055277 | MS.gene65665 | 0.896621 | 3.09E-76 | -1.69E-46 |
| MS.gene055303 | MS.gene65665 | 0.83181 | 1.35E-55 | -1.69E-46 |
| MS.gene055358 | MS.gene65665 | 0.817303 | 3.54E-52 | -1.69E-46 |
| MS.gene055390 | MS.gene65665 | 0.888573 | 5.24E-73 | -1.69E-46 |
| MS.gene055422 | MS.gene65665 | 0.929171 | 1.02E-92 | -1.69E-46 |
| MS.gene055428 | MS.gene65665 | 0.910441 | 1.87E-82 | -1.69E-46 |
| MS.gene05553 | MS.gene65665 | 0.856416 | 3.27E-62 | -1.69E-46 |
| MS.gene055564 | MS.gene65665 | 0.818624 | 1.78E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene65665 | 0.865556 | 5.42E-65 | -1.69E-46 |
| MS.gene055712 | MS.gene65665 | 0.879207 | 1.50E-69 | -1.69E-46 |
| MS.gene055859 | MS.gene65665 | 0.846471 | 2.13E-59 | -1.69E-46 |
| MS.gene056069 | MS.gene65665 | -0.833971 | 3.93E-56 | -1.69E-46 |
| MS.gene056191 | MS.gene65665 | 0.849329 | 3.47E-60 | -1.69E-46 |
| MS.gene056314 | MS.gene65665 | 0.81863 | 1.77E-52 | -1.69E-46 |
| MS.gene056407 | MS.gene65665 | 0.870943 | 9.95E-67 | -1.69E-46 |
| MS.gene056410 | MS.gene65665 | 0.822923 | 1.83E-53 | -1.69E-46 |
| MS.gene056451 | MS.gene65665 | 0.830787 | 2.41E-55 | -1.69E-46 |
| MS.gene056612 | MS.gene65665 | 0.887155 | 1.83E-72 | -1.69E-46 |
| MS.gene056659 | MS.gene65665 | 0.821176 | 4.64E-53 | -1.69E-46 |
| MS.gene056723 | MS.gene65665 | 0.832621 | 8.52E-56 | -1.69E-46 |
| MS.gene056796 | MS.gene65665 | 0.80237 | 5.79E-49 | -1.69E-46 |
| MS.gene056846 | MS.gene65665 | 0.816185 | 6.30E-52 | -1.69E-46 |
| MS.gene056875 | MS.gene65665 | 0.847192 | 1.35E-59 | -1.69E-46 |
| MS.gene056899 | MS.gene65665 | -0.825211 | 5.31E-54 | -1.69E-46 |
| MS.gene056902 | MS.gene65665 | 0.82246 | 2.34E-53 | -1.69E-46 |
| MS.gene056931 | MS.gene65665 | 0.810658 | 1.03E-50 | -1.69E-46 |
| MS.gene056933 | MS.gene65665 | 0.808111 | 3.64E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene65665 | 0.86465 | 1.04E-64 | -1.69E-46 |
| MS.gene05702 | MS.gene65665 | 0.876039 | 1.92E-68 | -1.69E-46 |
| MS.gene057121 | MS.gene65665 | 0.917227 | 6.87E-86 | -1.69E-46 |
| MS.gene057245 | MS.gene65665 | 0.892053 | 2.26E-74 | -1.69E-46 |
| MS.gene057260 | MS.gene65665 | 0.825621 | 4.24E-54 | -1.69E-46 |
| MS.gene05733 | MS.gene65665 | 0.822451 | 2.35E-53 | -1.69E-46 |
| MS.gene057439 | MS.gene65665 | 0.87282 | 2.37E-67 | -1.69E-46 |
| MS.gene057448 | MS.gene65665 | 0.861117 | 1.29E-63 | -1.69E-46 |
| MS.gene057449 | MS.gene65665 | 0.845682 | 3.49E-59 | -1.69E-46 |
| MS.gene057450 | MS.gene65665 | 0.864634 | 1.06E-64 | -1.69E-46 |
| MS.gene057469 | MS.gene65665 | 0.880003 | 7.85E-70 | -1.69E-46 |
| MS.gene057749 | MS.gene65665 | 0.819039 | 1.43E-52 | -1.69E-46 |
| MS.gene057750 | MS.gene65665 | 0.813158 | 2.95E-51 | -1.69E-46 |
| MS.gene057754 | MS.gene65665 | 0.818672 | 1.73E-52 | -1.69E-46 |
| MS.gene057782 | MS.gene65665 | 0.80614 | 9.51E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene65665 | 0.807099 | 5.96E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene65665 | 0.924647 | 5.33E-90 | -1.69E-46 |
| MS.gene058082 | MS.gene65665 | 0.820455 | 6.80E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene65665 | 0.922213 | 1.32E-88 | -1.69E-46 |
| MS.gene058142 | MS.gene65665 | 0.880901 | 3.75E-70 | -1.69E-46 |
| MS.gene058233 | MS.gene65665 | 0.841154 | 5.64E-58 | -1.69E-46 |
| MS.gene058236 | MS.gene65665 | 0.808065 | 3.72E-50 | -1.69E-46 |
| MS.gene058276 | MS.gene65665 | 0.841158 | 5.63E-58 | -1.69E-46 |
| MS.gene058293 | MS.gene65665 | 0.842811 | 2.06E-58 | -1.69E-46 |
| MS.gene058365 | MS.gene65665 | 0.815426 | 9.30E-52 | -1.69E-46 |
| MS.gene05842 | MS.gene65665 | 0.830542 | 2.77E-55 | -1.69E-46 |
| MS.gene058660 | MS.gene65665 | 0.888867 | 4.03E-73 | -1.69E-46 |
| MS.gene058710 | MS.gene65665 | 0.848156 | 7.33E-60 | -1.69E-46 |
| MS.gene058739 | MS.gene65665 | 0.802724 | 4.90E-49 | -1.69E-46 |
| MS.gene058749 | MS.gene65665 | 0.849486 | 3.14E-60 | -1.69E-46 |
| MS.gene058787 | MS.gene65665 | 0.811581 | 6.52E-51 | -1.69E-46 |
| MS.gene058833 | MS.gene65665 | 0.831804 | 1.36E-55 | -1.69E-46 |
| MS.gene058845 | MS.gene65665 | 0.871249 | 7.89E-67 | -1.69E-46 |
| MS.gene05886 | MS.gene65665 | 0.867598 | 1.22E-65 | -1.69E-46 |
| MS.gene058949 | MS.gene65665 | 0.809947 | 1.47E-50 | -1.69E-46 |
| MS.gene059033 | MS.gene65665 | -0.82424 | 8.99E-54 | -1.69E-46 |
| MS.gene05907 | MS.gene65665 | 0.931243 | 5.04E-94 | -1.69E-46 |
| MS.gene059124 | MS.gene65665 | 0.810058 | 1.39E-50 | -1.69E-46 |
| MS.gene059128 | MS.gene65665 | 0.806858 | 6.71E-50 | -1.69E-46 |
| MS.gene059228 | MS.gene65665 | 0.81148 | 6.86E-51 | -1.69E-46 |
| MS.gene059247 | MS.gene65665 | 0.805797 | 1.12E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene65665 | 0.830441 | 2.93E-55 | -1.69E-46 |
| MS.gene059294 | MS.gene65665 | 0.832485 | 9.20E-56 | -1.69E-46 |
| MS.gene059326 | MS.gene65665 | 0.800913 | 1.15E-48 | -1.69E-46 |
| MS.gene059342 | MS.gene65665 | 0.811587 | 6.50E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene65665 | 0.833215 | 6.06E-56 | -1.69E-46 |
| MS.gene059462 | MS.gene65665 | 0.801798 | 7.60E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene65665 | 0.897716 | 1.07E-76 | -1.69E-46 |
| MS.gene059597 | MS.gene65665 | 0.884728 | 1.50E-71 | -1.69E-46 |
| MS.gene05959 | MS.gene65665 | 0.82058 | 6.36E-53 | -1.69E-46 |
| MS.gene059676 | MS.gene65665 | 0.859158 | 5.02E-63 | -1.69E-46 |
| MS.gene059688 | MS.gene65665 | 0.863014 | 3.37E-64 | -1.69E-46 |
| MS.gene059692 | MS.gene65665 | 0.87627 | 1.60E-68 | -1.69E-46 |
| MS.gene059695 | MS.gene65665 | 0.87004 | 1.97E-66 | -1.69E-46 |
| MS.gene059708 | MS.gene65665 | 0.812558 | 3.99E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene65665 | 0.919276 | 5.51E-87 | -1.69E-46 |
| MS.gene059894 | MS.gene65665 | 0.891995 | 2.39E-74 | -1.69E-46 |
| MS.gene059899 | MS.gene65665 | 0.85572 | 5.22E-62 | -1.69E-46 |
| MS.gene060137 | MS.gene65665 | -0.809336 | 1.99E-50 | -1.69E-46 |
| MS.gene06037 | MS.gene65665 | 0.876035 | 1.92E-68 | -1.69E-46 |
| MS.gene060403 | MS.gene65665 | 0.824071 | 9.84E-54 | -1.69E-46 |
| MS.gene060404 | MS.gene65665 | 0.803833 | 2.89E-49 | -1.69E-46 |
| MS.gene060407 | MS.gene65665 | 0.830638 | 2.62E-55 | -1.69E-46 |
| MS.gene060476 | MS.gene65665 | 0.83472 | 2.55E-56 | -1.69E-46 |
| MS.gene060480 | MS.gene65665 | 0.819989 | 8.69E-53 | -1.69E-46 |
| MS.gene060495 | MS.gene65665 | 0.822072 | 2.88E-53 | -1.69E-46 |
| MS.gene060559 | MS.gene65665 | 0.833845 | 4.22E-56 | -1.69E-46 |
| MS.gene06090 | MS.gene65665 | 0.818179 | 2.24E-52 | -1.69E-46 |
| MS.gene060986 | MS.gene65665 | 0.807222 | 5.62E-50 | -1.69E-46 |
| MS.gene060994 | MS.gene65665 | 0.809851 | 1.54E-50 | -1.69E-46 |
| MS.gene061000 | MS.gene65665 | 0.804897 | 1.73E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene65665 | 0.918082 | 2.41E-86 | -1.69E-46 |
| MS.gene061051 | MS.gene65665 | -0.842378 | 2.68E-58 | -1.69E-46 |
| MS.gene061071 | MS.gene65665 | 0.820848 | 5.52E-53 | -1.69E-46 |
| MS.gene061112 | MS.gene65665 | 0.816551 | 5.22E-52 | -1.69E-46 |
| MS.gene061114 | MS.gene65665 | -0.827774 | 1.30E-54 | -1.69E-46 |
| MS.gene061154 | MS.gene65665 | 0.811129 | 8.17E-51 | -1.69E-46 |
| MS.gene061159 | MS.gene65665 | 0.827818 | 1.27E-54 | -1.69E-46 |
| MS.gene061265 | MS.gene65665 | 0.81789 | 2.61E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65665.t1 | MTR_5g055940 | 97.955 | 440 | 9 | 0 | 1 | 440 | 103 | 542 | 0.0 | 883 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65665.t1 | AT1G48520 | 81.364 | 440 | 82 | 0 | 1 | 440 | 109 | 548 | 0.0 | 775 |
| MS.gene65665.t1 | AT1G48520 | 81.432 | 377 | 70 | 0 | 1 | 377 | 109 | 485 | 0.0 | 670 |
| MS.gene65665.t1 | AT1G48520 | 81.408 | 355 | 66 | 0 | 1 | 355 | 109 | 463 | 0.0 | 638 |
Find 102 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGAGGTTGGTTAGGTATT+TGG | 0.068090 | 5.2:-48089341 | MS.gene65665:CDS |
| CAGAGGTTGGTTAGGTATTT+GGG | 0.156189 | 5.2:-48089340 | MS.gene65665:CDS |
| ATTGAGTTTGCTGTTAAATT+AGG | 0.201148 | 5.2:-48091326 | MS.gene65665:CDS |
| ACTGATGGTTCCATCTTTAA+TGG | 0.209889 | 5.2:+48085126 | None:intergenic |
| TGTAAGCTTTACGTCATTTA+TGG | 0.214602 | 5.2:+48085177 | None:intergenic |
| GATGTTCCGATTGCGAGTTC+TGG | 0.238658 | 5.2:-48091206 | MS.gene65665:CDS |
| AAGTTATTGCATACTGAAAA+TGG | 0.256084 | 5.2:-48091095 | MS.gene65665:CDS |
| CCCATTGGGCAGTCAAAGTT+TGG | 0.260516 | 5.2:-48089256 | MS.gene65665:CDS |
| CGGTATTGCTCAACCTGTTT+CGG | 0.296397 | 5.2:+48083716 | None:intergenic |
| TAGTACAGGAAACTCGATTC+TGG | 0.297778 | 5.2:-48089022 | MS.gene65665:CDS |
| TTTCACAGGTTGATCTAAAC+AGG | 0.303878 | 5.2:-48089444 | MS.gene65665:intron |
| GTTGATATTCCTTTGGAGTA+TGG | 0.319525 | 5.2:-48091173 | MS.gene65665:CDS |
| ATCAACTCAGCCAACTCTTC+AGG | 0.348581 | 5.2:+48085154 | None:intergenic |
| CGTTTGATTCTAAGTTTGAT+AGG | 0.356371 | 5.2:-48091280 | MS.gene65665:CDS |
| TTCCTTGACACTTCCACCCT+TGG | 0.364393 | 5.2:+48084540 | None:intergenic |
| TGGTATTCAAAATTCTTTAC+CGG | 0.373277 | 5.2:-48088776 | MS.gene65665:CDS |
| ATGTTCCGATTGCGAGTTCT+GGG | 0.375435 | 5.2:-48091205 | MS.gene65665:CDS |
| TCTTGATGTTGATATTCCTT+TGG | 0.376577 | 5.2:-48091180 | MS.gene65665:CDS |
| AGAAAAGAAGGACTTGGTTC+AGG | 0.386903 | 5.2:-48084512 | MS.gene65665:intron |
| CCAGTTTGTATGGGGTTACC+AGG | 0.393004 | 5.2:-48091377 | None:intergenic |
| CAGAATTACAGAGGTTGGTT+AGG | 0.400205 | 5.2:-48089348 | MS.gene65665:CDS |
| TGATAGCCTTTAGGCAAATC+AGG | 0.403892 | 5.2:+48091242 | None:intergenic |
| TGCGAAATCTGATAGCCTTT+AGG | 0.408338 | 5.2:+48091233 | None:intergenic |
| TGGGATTACTAGGGTTCATA+TGG | 0.413274 | 5.2:-48091132 | MS.gene65665:CDS |
| TTGATTGCTTCCATTAAAGA+TGG | 0.413858 | 5.2:-48085136 | MS.gene65665:CDS |
| GGTGGTGGGCATAAGAGGTT+TGG | 0.415987 | 5.2:-48091152 | MS.gene65665:CDS |
| CTTCCCGATCTTGCCACTGA+TGG | 0.416937 | 5.2:+48085111 | None:intergenic |
| AGTATGGTGGTGGGCATAAG+AGG | 0.418164 | 5.2:-48091157 | MS.gene65665:CDS |
| ATAAGAGGTTTGGGATTACT+AGG | 0.423820 | 5.2:-48091142 | MS.gene65665:CDS |
| ACTGATGGAAGGTCTGGTTC+TGG | 0.424146 | 5.2:+48088823 | None:intergenic |
| AGATATGAAAAGATGGGATT+AGG | 0.425555 | 5.2:-48088730 | MS.gene65665:CDS |
| TCAATACCATTTCTCATGTC+AGG | 0.427491 | 5.2:+48089388 | None:intergenic |
| ATAACCTTACTGTTTAAAAC+AGG | 0.429595 | 5.2:+48091347 | None:intergenic |
| GTGGTGGGCATAAGAGGTTT+GGG | 0.440851 | 5.2:-48091151 | MS.gene65665:CDS |
| TCTACTTAACAAGATTCTCT+TGG | 0.443250 | 5.2:-48083529 | MS.gene65665:CDS |
| GGAACCATCAGTGGCAAGAT+CGG | 0.455897 | 5.2:-48085115 | MS.gene65665:CDS |
| GTTCATATGGAAGAGGATGC+TGG | 0.459070 | 5.2:-48091119 | MS.gene65665:CDS |
| TGGATAATGAGTGACATTGC+TGG | 0.466407 | 5.2:-48085223 | MS.gene65665:CDS |
| CCATTGGGCAGTCAAAGTTT+GGG | 0.467411 | 5.2:-48089255 | MS.gene65665:CDS |
| ATGCAAAGCTAGTTGCCAAC+TGG | 0.470558 | 5.2:-48085243 | MS.gene65665:CDS |
| GATCGCAGATAATCCGAAAC+AGG | 0.471768 | 5.2:-48083729 | MS.gene65665:CDS |
| AGGATTACTGATGGAAGGTC+TGG | 0.472816 | 5.2:+48088817 | None:intergenic |
| CCAAACTTTGACTGCCCAAT+GGG | 0.474365 | 5.2:+48089256 | None:intergenic |
| ACGTAGAAGATATGAAAAGA+TGG | 0.477653 | 5.2:-48088737 | MS.gene65665:CDS |
| CTTTCGCAAGAATATGTAGA+TGG | 0.478868 | 5.2:-48088796 | MS.gene65665:CDS |
| TGCAGCAGAATTACAGAGGT+TGG | 0.481825 | 5.2:-48089353 | MS.gene65665:CDS |
| TCTGAGCCTGACATGAGAAA+TGG | 0.487908 | 5.2:-48089394 | MS.gene65665:CDS |
| GAACCATCAGTGGCAAGATC+GGG | 0.490650 | 5.2:-48085114 | MS.gene65665:CDS |
| ATTCCTTTGGAGTATGGTGG+TGG | 0.491117 | 5.2:-48091167 | MS.gene65665:CDS |
| TCAAGCAGATCAGATAGTAC+AGG | 0.494685 | 5.2:-48089036 | MS.gene65665:CDS |
| TGTCCAAATGCAGGTAATGA+AGG | 0.496036 | 5.2:-48083577 | MS.gene65665:intron |
| CAAGGAAATCATAGAAAAGA+AGG | 0.496302 | 5.2:-48084524 | MS.gene65665:CDS |
| CGTAGAAGATATGAAAAGAT+GGG | 0.500188 | 5.2:-48088736 | MS.gene65665:CDS |
| AGTACAGGAAACTCGATTCT+GGG | 0.507212 | 5.2:-48089021 | MS.gene65665:CDS |
| CAGGTTGATCTAAACAGGGC+AGG | 0.508766 | 5.2:-48089439 | MS.gene65665:CDS |
| AATGTATCAGTACGACCCAT+TGG | 0.509398 | 5.2:-48089271 | MS.gene65665:CDS |
| ATTCTGGGAAGAAGGCTCTC+AGG | 0.511392 | 5.2:-48089006 | MS.gene65665:intron |
| CCCAAACTTTGACTGCCCAA+TGG | 0.522022 | 5.2:+48089255 | None:intergenic |
| TTTGATGCTACTCTTGCAAA+GGG | 0.524915 | 5.2:-48085271 | MS.gene65665:CDS |
| CTATCTGATCTGCTTGACCT+TGG | 0.525882 | 5.2:+48089042 | None:intergenic |
| TGAAAATGGAAATTATTCTC+AGG | 0.527515 | 5.2:-48091081 | MS.gene65665:intron |
| ATGTATCAGTACGACCCATT+GGG | 0.527958 | 5.2:-48089270 | MS.gene65665:CDS |
| AGAGGTTGGTTAGGTATTTG+GGG | 0.528284 | 5.2:-48089339 | MS.gene65665:CDS |
| CAGGTAATGAAGGCATCTAA+AGG | 0.530365 | 5.2:-48083567 | MS.gene65665:CDS |
| GAAACTCGATTCTGGGAAGA+AGG | 0.530670 | 5.2:-48089014 | MS.gene65665:CDS |
| AGAATCTTGTTAAGTAGACC+TGG | 0.533378 | 5.2:+48083534 | None:intergenic |
| AGAAACCCAGAACTCGCAAT+CGG | 0.541427 | 5.2:+48091200 | None:intergenic |
| GCAGTCAAAGTTTGGGACAA+AGG | 0.544671 | 5.2:-48089248 | MS.gene65665:intron |
| TTCATATGGAAGAGGATGCT+GGG | 0.547037 | 5.2:-48091118 | MS.gene65665:CDS |
| TACTAGGGTTCATATGGAAG+AGG | 0.547980 | 5.2:-48091126 | MS.gene65665:CDS |
| TTCCTTTGGAGTATGGTGGT+GGG | 0.550417 | 5.2:-48091166 | MS.gene65665:CDS |
| AGGTTGATCTAAACAGGGCA+GGG | 0.554153 | 5.2:-48089438 | MS.gene65665:CDS |
| ACTATTTGAGCTGTTAGCCA+AGG | 0.556875 | 5.2:-48084557 | MS.gene65665:CDS |
| TCTTGCGAAAGGATTACTGA+TGG | 0.558499 | 5.2:+48088808 | None:intergenic |
| CATCTACATATTCTTGCGAA+AGG | 0.562299 | 5.2:+48088797 | None:intergenic |
| AAAGCTTACACCTGAAGAGT+TGG | 0.568134 | 5.2:-48085164 | MS.gene65665:CDS |
| AATCATAGAAAAGAAGGACT+TGG | 0.570914 | 5.2:-48084518 | MS.gene65665:CDS |
| TAAGAGGTTTGGGATTACTA+GGG | 0.574696 | 5.2:-48091141 | MS.gene65665:CDS |
| GATATTCCTTTGGAGTATGG+TGG | 0.580260 | 5.2:-48091170 | MS.gene65665:CDS |
| TTTGAGCTGTTAGCCAAGGG+TGG | 0.582248 | 5.2:-48084553 | MS.gene65665:CDS |
| GCGAAAGGATTACTGATGGA+AGG | 0.592489 | 5.2:+48088812 | None:intergenic |
| AATGTCACTCATTATCCAGT+TGG | 0.593782 | 5.2:+48085228 | None:intergenic |
| GAATCTTGTTAAGTAGACCT+GGG | 0.597544 | 5.2:+48083535 | None:intergenic |
| AGCCAAGGGTGGAAGTGTCA+AGG | 0.597653 | 5.2:-48084542 | MS.gene65665:CDS |
| ATTAAAGATGGAACCATCAG+TGG | 0.598421 | 5.2:-48085124 | MS.gene65665:CDS |
| CTATTTGAGCTGTTAGCCAA+GGG | 0.599372 | 5.2:-48084556 | MS.gene65665:CDS |
| AGCAATGGAAATATGCAAGA+AGG | 0.611497 | 5.2:-48089313 | MS.gene65665:CDS |
| CAGTGGCAAGATCGGGAAGG+AGG | 0.617613 | 5.2:-48085107 | MS.gene65665:intron |
| AATGAAGGCATCTAAAGGCA+AGG | 0.623180 | 5.2:-48083562 | MS.gene65665:CDS |
| GGAGGCAAAACTAAACTCCA+AGG | 0.626684 | 5.2:-48083692 | MS.gene65665:CDS |
| TCTAAAGGCAAGGCAAACCC+AGG | 0.631689 | 5.2:-48083552 | MS.gene65665:CDS |
| GGTTGATCTAAACAGGGCAG+GGG | 0.633434 | 5.2:-48089437 | MS.gene65665:CDS |
| TTTAAAACAGGTAAAGCACC+TGG | 0.639484 | 5.2:+48091359 | None:intergenic |
| CAGGTGCAACTTCATAGCCA+AGG | 0.640916 | 5.2:-48089059 | MS.gene65665:CDS |
| TCAGAAACTATCTCTAGCAA+AGG | 0.645875 | 5.2:+48089412 | None:intergenic |
| GAGGTTGGTTAGGTATTTGG+GGG | 0.650243 | 5.2:-48089338 | MS.gene65665:CDS |
| TTCACAGGTTGATCTAAACA+GGG | 0.650833 | 5.2:-48089443 | MS.gene65665:intron |
| TGCCCACCACCATACTCCAA+AGG | 0.652919 | 5.2:+48091164 | None:intergenic |
| CATCAGTGGCAAGATCGGGA+AGG | 0.654102 | 5.2:-48085110 | MS.gene65665:CDS |
| CAGGTTGAGCAATACCGAGG+AGG | 0.701313 | 5.2:-48083710 | MS.gene65665:CDS |
| AATATGCAGCAGAATTACAG+AGG | 0.709133 | 5.2:-48089357 | MS.gene65665:CDS |
| AAACAGGTTGAGCAATACCG+AGG | 0.723621 | 5.2:-48083713 | MS.gene65665:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 48083512 | 48091390 | 48083512 | ID=MS.gene65665 |
| chr5.2 | mRNA | 48083512 | 48091390 | 48083512 | ID=MS.gene65665.t1;Parent=MS.gene65665 |
| chr5.2 | exon | 48091082 | 48091390 | 48091082 | ID=MS.gene65665.t1.exon1;Parent=MS.gene65665.t1 |
| chr5.2 | CDS | 48091082 | 48091390 | 48091082 | ID=cds.MS.gene65665.t1;Parent=MS.gene65665.t1 |
| chr5.2 | exon | 48089249 | 48089458 | 48089249 | ID=MS.gene65665.t1.exon2;Parent=MS.gene65665.t1 |
| chr5.2 | CDS | 48089249 | 48089458 | 48089249 | ID=cds.MS.gene65665.t1;Parent=MS.gene65665.t1 |
| chr5.2 | exon | 48089007 | 48089147 | 48089007 | ID=MS.gene65665.t1.exon3;Parent=MS.gene65665.t1 |
| chr5.2 | CDS | 48089007 | 48089147 | 48089007 | ID=cds.MS.gene65665.t1;Parent=MS.gene65665.t1 |
| chr5.2 | exon | 48088693 | 48088896 | 48088693 | ID=MS.gene65665.t1.exon4;Parent=MS.gene65665.t1 |
| chr5.2 | CDS | 48088693 | 48088896 | 48088693 | ID=cds.MS.gene65665.t1;Parent=MS.gene65665.t1 |
| chr5.2 | exon | 48085108 | 48085305 | 48085108 | ID=MS.gene65665.t1.exon5;Parent=MS.gene65665.t1 |
| chr5.2 | CDS | 48085108 | 48085305 | 48085108 | ID=cds.MS.gene65665.t1;Parent=MS.gene65665.t1 |
| chr5.2 | exon | 48084513 | 48084581 | 48084513 | ID=MS.gene65665.t1.exon6;Parent=MS.gene65665.t1 |
| chr5.2 | CDS | 48084513 | 48084581 | 48084513 | ID=cds.MS.gene65665.t1;Parent=MS.gene65665.t1 |
| chr5.2 | exon | 48083676 | 48083792 | 48083676 | ID=MS.gene65665.t1.exon7;Parent=MS.gene65665.t1 |
| chr5.2 | CDS | 48083676 | 48083792 | 48083676 | ID=cds.MS.gene65665.t1;Parent=MS.gene65665.t1 |
| chr5.2 | exon | 48083512 | 48083586 | 48083512 | ID=MS.gene65665.t1.exon8;Parent=MS.gene65665.t1 |
| chr5.2 | CDS | 48083512 | 48083586 | 48083512 | ID=cds.MS.gene65665.t1;Parent=MS.gene65665.t1 |
| Gene Sequence |
| Protein sequence |
