Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062883.t1 | XP_013446016.1 | 96.7 | 333 | 6 | 1 | 1 | 333 | 1 | 328 | 1.50E-182 | 648.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062883.t1 | Q8GYN9 | 76.4 | 339 | 72 | 4 | 1 | 333 | 1 | 337 | 9.7e-146 | 517.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062883.t1 | A0A072TT65 | 96.7 | 333 | 6 | 1 | 1 | 333 | 1 | 328 | 1.1e-182 | 648.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene062883 | 0.806784 | 6.95E-50 | -1.69E-46 |
| MS.gene049151 | MS.gene062883 | 0.80445 | 2.15E-49 | -1.69E-46 |
| MS.gene049153 | MS.gene062883 | 0.801913 | 7.19E-49 | -1.69E-46 |
| MS.gene049260 | MS.gene062883 | 0.85245 | 4.58E-61 | -1.69E-46 |
| MS.gene049284 | MS.gene062883 | 0.821561 | 3.78E-53 | -1.69E-46 |
| MS.gene049346 | MS.gene062883 | 0.839933 | 1.18E-57 | -1.69E-46 |
| MS.gene049351 | MS.gene062883 | 0.836054 | 1.17E-56 | -1.69E-46 |
| MS.gene049389 | MS.gene062883 | 0.841551 | 4.44E-58 | -1.69E-46 |
| MS.gene049491 | MS.gene062883 | 0.849094 | 4.03E-60 | -1.69E-46 |
| MS.gene049599 | MS.gene062883 | -0.81688 | 4.40E-52 | -1.69E-46 |
| MS.gene049661 | MS.gene062883 | 0.828002 | 1.15E-54 | -1.69E-46 |
| MS.gene049662 | MS.gene062883 | 0.8333 | 5.77E-56 | -1.69E-46 |
| MS.gene049758 | MS.gene062883 | 0.906133 | 2.05E-80 | -1.69E-46 |
| MS.gene049910 | MS.gene062883 | 0.827828 | 1.26E-54 | -1.69E-46 |
| MS.gene049915 | MS.gene062883 | 0.802833 | 4.65E-49 | -1.69E-46 |
| MS.gene050076 | MS.gene062883 | 0.859766 | 3.29E-63 | -1.69E-46 |
| MS.gene050099 | MS.gene062883 | 0.861721 | 8.41E-64 | -1.69E-46 |
| MS.gene050128 | MS.gene062883 | 0.869156 | 3.82E-66 | -1.69E-46 |
| MS.gene050301 | MS.gene062883 | 0.929248 | 9.12E-93 | -1.69E-46 |
| MS.gene050330 | MS.gene062883 | -0.800356 | 1.50E-48 | -1.69E-46 |
| MS.gene050397 | MS.gene062883 | 0.842535 | 2.44E-58 | -1.69E-46 |
| MS.gene050404 | MS.gene062883 | 0.83478 | 2.46E-56 | -1.69E-46 |
| MS.gene050406 | MS.gene062883 | 0.846887 | 1.64E-59 | -1.69E-46 |
| MS.gene050432 | MS.gene062883 | 0.853711 | 1.99E-61 | -1.69E-46 |
| MS.gene050464 | MS.gene062883 | 0.837009 | 6.69E-57 | -1.69E-46 |
| MS.gene050529 | MS.gene062883 | 0.860726 | 1.69E-63 | -1.69E-46 |
| MS.gene05053 | MS.gene062883 | 0.801591 | 8.38E-49 | -1.69E-46 |
| MS.gene050558 | MS.gene062883 | 0.82786 | 1.24E-54 | -1.69E-46 |
| MS.gene050767 | MS.gene062883 | 0.836236 | 1.05E-56 | -1.69E-46 |
| MS.gene050770 | MS.gene062883 | 0.8371 | 6.34E-57 | -1.69E-46 |
| MS.gene050783 | MS.gene062883 | 0.824746 | 6.83E-54 | -1.69E-46 |
| MS.gene050812 | MS.gene062883 | 0.810314 | 1.23E-50 | -1.69E-46 |
| MS.gene05101 | MS.gene062883 | 0.9028 | 6.69E-79 | -1.69E-46 |
| MS.gene05119 | MS.gene062883 | -0.808244 | 3.41E-50 | -1.69E-46 |
| MS.gene051240 | MS.gene062883 | 0.807052 | 6.10E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene062883 | 0.881891 | 1.65E-70 | -1.69E-46 |
| MS.gene051582 | MS.gene062883 | 0.835021 | 2.14E-56 | -1.69E-46 |
| MS.gene051662 | MS.gene062883 | 0.841015 | 6.14E-58 | -1.69E-46 |
| MS.gene051663 | MS.gene062883 | 0.86541 | 6.03E-65 | -1.69E-46 |
| MS.gene051860 | MS.gene062883 | 0.849408 | 3.30E-60 | -1.69E-46 |
| MS.gene051877 | MS.gene062883 | 0.804405 | 2.19E-49 | -1.69E-46 |
| MS.gene052078 | MS.gene062883 | 0.90056 | 6.49E-78 | -1.69E-46 |
| MS.gene052178 | MS.gene062883 | 0.897097 | 1.96E-76 | -1.69E-46 |
| MS.gene052188 | MS.gene062883 | 0.852012 | 6.10E-61 | -1.69E-46 |
| MS.gene052207 | MS.gene062883 | 0.843876 | 1.07E-58 | -1.69E-46 |
| MS.gene052253 | MS.gene062883 | 0.833964 | 3.94E-56 | -1.69E-46 |
| MS.gene052287 | MS.gene062883 | 0.848001 | 8.09E-60 | -1.69E-46 |
| MS.gene052290 | MS.gene062883 | 0.802462 | 5.55E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene062883 | 0.856804 | 2.51E-62 | -1.69E-46 |
| MS.gene052326 | MS.gene062883 | 0.884716 | 1.51E-71 | -1.69E-46 |
| MS.gene052340 | MS.gene062883 | 0.864819 | 9.24E-65 | -1.69E-46 |
| MS.gene052344 | MS.gene062883 | -0.814034 | 1.89E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene062883 | 0.830258 | 3.25E-55 | -1.69E-46 |
| MS.gene052917 | MS.gene062883 | -0.819866 | 9.28E-53 | -1.69E-46 |
| MS.gene053073 | MS.gene062883 | 0.831194 | 1.92E-55 | -1.69E-46 |
| MS.gene053103 | MS.gene062883 | 0.800109 | 1.68E-48 | -1.69E-46 |
| MS.gene053209 | MS.gene062883 | 0.864241 | 1.40E-64 | -1.69E-46 |
| MS.gene053322 | MS.gene062883 | 0.803304 | 3.72E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene062883 | 0.873003 | 2.06E-67 | -1.69E-46 |
| MS.gene053836 | MS.gene062883 | 0.898499 | 5.00E-77 | -1.69E-46 |
| MS.gene053907 | MS.gene062883 | 0.817289 | 3.56E-52 | -1.69E-46 |
| MS.gene053928 | MS.gene062883 | 0.832495 | 9.15E-56 | -1.69E-46 |
| MS.gene053971 | MS.gene062883 | 0.836932 | 7.00E-57 | -1.69E-46 |
| MS.gene054010 | MS.gene062883 | 0.808404 | 3.15E-50 | -1.69E-46 |
| MS.gene054011 | MS.gene062883 | 0.827711 | 1.35E-54 | -1.69E-46 |
| MS.gene054012 | MS.gene062883 | 0.81594 | 7.14E-52 | -1.69E-46 |
| MS.gene054013 | MS.gene062883 | 0.815811 | 7.64E-52 | -1.69E-46 |
| MS.gene054123 | MS.gene062883 | 0.841761 | 3.90E-58 | -1.69E-46 |
| MS.gene054184 | MS.gene062883 | 0.804025 | 2.63E-49 | -1.69E-46 |
| MS.gene054185 | MS.gene062883 | 0.806784 | 6.95E-50 | -1.69E-46 |
| MS.gene054214 | MS.gene062883 | 0.838794 | 2.33E-57 | -1.69E-46 |
| MS.gene054376 | MS.gene062883 | 0.856656 | 2.78E-62 | -1.69E-46 |
| MS.gene054473 | MS.gene062883 | 0.851165 | 1.06E-60 | -1.69E-46 |
| MS.gene05455 | MS.gene062883 | 0.87618 | 1.71E-68 | -1.69E-46 |
| MS.gene054618 | MS.gene062883 | 0.825275 | 5.12E-54 | -1.69E-46 |
| MS.gene054802 | MS.gene062883 | 0.81306 | 3.10E-51 | -1.69E-46 |
| MS.gene054803 | MS.gene062883 | 0.812522 | 4.06E-51 | -1.69E-46 |
| MS.gene054804 | MS.gene062883 | 0.814764 | 1.30E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene062883 | 0.807626 | 4.61E-50 | -1.69E-46 |
| MS.gene054983 | MS.gene062883 | 0.814496 | 1.50E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene062883 | 0.853514 | 2.27E-61 | -1.69E-46 |
| MS.gene055254 | MS.gene062883 | 0.818021 | 2.44E-52 | -1.69E-46 |
| MS.gene055277 | MS.gene062883 | 0.901946 | 1.60E-78 | -1.69E-46 |
| MS.gene055303 | MS.gene062883 | 0.845896 | 3.05E-59 | -1.69E-46 |
| MS.gene055390 | MS.gene062883 | 0.883588 | 3.95E-71 | -1.69E-46 |
| MS.gene055412 | MS.gene062883 | 0.800827 | 1.20E-48 | -1.69E-46 |
| MS.gene055422 | MS.gene062883 | 0.903555 | 3.07E-79 | -1.69E-46 |
| MS.gene055428 | MS.gene062883 | 0.905192 | 5.57E-80 | -1.69E-46 |
| MS.gene05553 | MS.gene062883 | 0.806473 | 8.09E-50 | -1.69E-46 |
| MS.gene055604 | MS.gene062883 | 0.865619 | 5.18E-65 | -1.69E-46 |
| MS.gene055712 | MS.gene062883 | 0.858328 | 8.88E-63 | -1.69E-46 |
| MS.gene055896 | MS.gene062883 | 0.805856 | 1.09E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene062883 | 0.856054 | 4.17E-62 | -1.69E-46 |
| MS.gene056314 | MS.gene062883 | 0.820526 | 6.55E-53 | -1.69E-46 |
| MS.gene056407 | MS.gene062883 | 0.858209 | 9.64E-63 | -1.69E-46 |
| MS.gene056410 | MS.gene062883 | 0.842373 | 2.69E-58 | -1.69E-46 |
| MS.gene056451 | MS.gene062883 | 0.808783 | 2.61E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene062883 | 0.826611 | 2.47E-54 | -1.69E-46 |
| MS.gene056612 | MS.gene062883 | 0.896328 | 4.10E-76 | -1.69E-46 |
| MS.gene056772 | MS.gene062883 | 0.808696 | 2.73E-50 | -1.69E-46 |
| MS.gene056796 | MS.gene062883 | 0.817268 | 3.60E-52 | -1.69E-46 |
| MS.gene056902 | MS.gene062883 | 0.822797 | 1.95E-53 | -1.69E-46 |
| MS.gene056931 | MS.gene062883 | 0.812843 | 3.46E-51 | -1.69E-46 |
| MS.gene056933 | MS.gene062883 | 0.814694 | 1.35E-51 | -1.69E-46 |
| MS.gene056935 | MS.gene062883 | 0.801752 | 7.76E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene062883 | 0.885051 | 1.13E-71 | -1.69E-46 |
| MS.gene057121 | MS.gene062883 | 0.869279 | 3.49E-66 | -1.69E-46 |
| MS.gene057245 | MS.gene062883 | 0.846814 | 1.71E-59 | -1.69E-46 |
| MS.gene057260 | MS.gene062883 | 0.812124 | 4.96E-51 | -1.69E-46 |
| MS.gene057295 | MS.gene062883 | 0.834566 | 2.78E-56 | -1.69E-46 |
| MS.gene05733 | MS.gene062883 | 0.845153 | 4.85E-59 | -1.69E-46 |
| MS.gene057439 | MS.gene062883 | 0.865014 | 8.02E-65 | -1.69E-46 |
| MS.gene057448 | MS.gene062883 | 0.81999 | 8.69E-53 | -1.69E-46 |
| MS.gene057449 | MS.gene062883 | 0.810237 | 1.27E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene062883 | 0.832107 | 1.14E-55 | -1.69E-46 |
| MS.gene057469 | MS.gene062883 | 0.803724 | 3.04E-49 | -1.69E-46 |
| MS.gene057754 | MS.gene062883 | 0.810413 | 1.17E-50 | -1.69E-46 |
| MS.gene057779 | MS.gene062883 | 0.805339 | 1.40E-49 | -1.69E-46 |
| MS.gene057796 | MS.gene062883 | 0.804963 | 1.68E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene062883 | 0.89232 | 1.77E-74 | -1.69E-46 |
| MS.gene058082 | MS.gene062883 | 0.843119 | 1.70E-58 | -1.69E-46 |
| MS.gene05811 | MS.gene062883 | 0.891073 | 5.54E-74 | -1.69E-46 |
| MS.gene058142 | MS.gene062883 | 0.851263 | 9.95E-61 | -1.69E-46 |
| MS.gene058233 | MS.gene062883 | 0.839589 | 1.45E-57 | -1.69E-46 |
| MS.gene058236 | MS.gene062883 | 0.803539 | 3.32E-49 | -1.69E-46 |
| MS.gene058276 | MS.gene062883 | 0.848537 | 5.75E-60 | -1.69E-46 |
| MS.gene058293 | MS.gene062883 | 0.878754 | 2.17E-69 | -1.69E-46 |
| MS.gene058365 | MS.gene062883 | 0.836759 | 7.75E-57 | -1.69E-46 |
| MS.gene058660 | MS.gene062883 | 0.877565 | 5.68E-69 | -1.69E-46 |
| MS.gene058749 | MS.gene062883 | 0.83655 | 8.76E-57 | -1.69E-46 |
| MS.gene058787 | MS.gene062883 | 0.84446 | 7.46E-59 | -1.69E-46 |
| MS.gene058833 | MS.gene062883 | 0.80878 | 2.62E-50 | -1.69E-46 |
| MS.gene058845 | MS.gene062883 | 0.860553 | 1.91E-63 | -1.69E-46 |
| MS.gene058928 | MS.gene062883 | 0.802954 | 4.39E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene062883 | 0.874545 | 6.21E-68 | -1.69E-46 |
| MS.gene059228 | MS.gene062883 | 0.830499 | 2.84E-55 | -1.69E-46 |
| MS.gene059294 | MS.gene062883 | 0.820957 | 5.21E-53 | -1.69E-46 |
| MS.gene059326 | MS.gene062883 | 0.821741 | 3.44E-53 | -1.69E-46 |
| MS.gene059342 | MS.gene062883 | 0.832167 | 1.10E-55 | -1.69E-46 |
| MS.gene059518 | MS.gene062883 | 0.903602 | 2.93E-79 | -1.69E-46 |
| MS.gene059597 | MS.gene062883 | 0.887876 | 9.70E-73 | -1.69E-46 |
| MS.gene05959 | MS.gene062883 | 0.814067 | 1.86E-51 | -1.69E-46 |
| MS.gene059676 | MS.gene062883 | 0.844809 | 6.01E-59 | -1.69E-46 |
| MS.gene059688 | MS.gene062883 | 0.850258 | 1.91E-60 | -1.69E-46 |
| MS.gene059692 | MS.gene062883 | 0.872688 | 2.62E-67 | -1.69E-46 |
| MS.gene059695 | MS.gene062883 | 0.876416 | 1.42E-68 | -1.69E-46 |
| MS.gene059708 | MS.gene062883 | 0.827836 | 1.26E-54 | -1.69E-46 |
| MS.gene05984 | MS.gene062883 | 0.864078 | 1.57E-64 | -1.69E-46 |
| MS.gene059894 | MS.gene062883 | 0.898834 | 3.60E-77 | -1.69E-46 |
| MS.gene059899 | MS.gene062883 | 0.832009 | 1.21E-55 | -1.69E-46 |
| MS.gene059960 | MS.gene062883 | 0.815733 | 7.95E-52 | -1.69E-46 |
| MS.gene059974 | MS.gene062883 | 0.839334 | 1.69E-57 | -1.69E-46 |
| MS.gene060005 | MS.gene062883 | 0.825873 | 3.70E-54 | -1.69E-46 |
| MS.gene06037 | MS.gene062883 | 0.894073 | 3.47E-75 | -1.69E-46 |
| MS.gene060407 | MS.gene062883 | 0.849085 | 4.05E-60 | -1.69E-46 |
| MS.gene060476 | MS.gene062883 | 0.866914 | 2.01E-65 | -1.69E-46 |
| MS.gene060495 | MS.gene062883 | 0.810526 | 1.10E-50 | -1.69E-46 |
| MS.gene060559 | MS.gene062883 | 0.824088 | 9.76E-54 | -1.69E-46 |
| MS.gene06090 | MS.gene062883 | 0.818968 | 1.49E-52 | -1.69E-46 |
| MS.gene061049 | MS.gene062883 | 0.912385 | 2.07E-83 | -1.69E-46 |
| MS.gene061051 | MS.gene062883 | -0.847676 | 9.94E-60 | -1.69E-46 |
| MS.gene061112 | MS.gene062883 | 0.835742 | 1.41E-56 | -1.69E-46 |
| MS.gene061265 | MS.gene062883 | 0.837172 | 6.08E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene050322 | MS.gene062883 | PPI |
| MS.gene007227 | MS.gene062883 | PPI |
| MS.gene35396 | MS.gene062883 | PPI |
| MS.gene062883 | MS.gene84339 | PPI |
| MS.gene034468 | MS.gene062883 | PPI |
| MS.gene66767 | MS.gene062883 | PPI |
| MS.gene43051 | MS.gene062883 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062883.t1 | MTR_8g064990 | 96.697 | 333 | 6 | 1 | 1 | 333 | 1 | 328 | 0.0 | 667 |
| MS.gene062883.t1 | MTR_8g064990 | 98.810 | 252 | 3 | 0 | 82 | 333 | 3 | 254 | 0.0 | 520 |
| MS.gene062883.t1 | MTR_4g122220 | 34.928 | 209 | 123 | 3 | 81 | 285 | 14 | 213 | 1.83e-26 | 105 |
| MS.gene062883.t1 | MTR_8g062585 | 85.417 | 48 | 7 | 0 | 160 | 207 | 30 | 77 | 5.75e-24 | 94.0 |
| MS.gene062883.t1 | MTR_4g100350 | 25.424 | 295 | 210 | 4 | 37 | 327 | 10 | 298 | 3.75e-21 | 92.0 |
| MS.gene062883.t1 | MTR_8g062580 | 91.304 | 46 | 4 | 0 | 250 | 295 | 8 | 53 | 4.95e-21 | 90.9 |
| MS.gene062883.t1 | MTR_3g085700 | 28.826 | 281 | 173 | 10 | 66 | 329 | 2 | 272 | 5.71e-20 | 88.6 |
| MS.gene062883.t1 | MTR_2027s0010 | 29.944 | 177 | 111 | 5 | 81 | 252 | 8 | 176 | 1.71e-12 | 66.6 |
| MS.gene062883.t1 | MTR_8g010580 | 27.972 | 143 | 97 | 3 | 86 | 224 | 23 | 163 | 6.65e-11 | 63.2 |
| MS.gene062883.t1 | MTR_8g010580 | 27.972 | 143 | 97 | 3 | 86 | 224 | 23 | 163 | 9.56e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062883.t1 | AT1G60550 | 76.401 | 339 | 72 | 4 | 1 | 333 | 1 | 337 | 0.0 | 533 |
| MS.gene062883.t1 | AT4G16210 | 34.043 | 235 | 131 | 6 | 69 | 292 | 5 | 226 | 3.65e-28 | 110 |
| MS.gene062883.t1 | AT4G16800 | 29.435 | 248 | 171 | 3 | 82 | 327 | 54 | 299 | 2.66e-26 | 106 |
| MS.gene062883.t1 | AT5G43280 | 26.277 | 274 | 178 | 10 | 74 | 329 | 11 | 278 | 5.73e-13 | 68.6 |
| MS.gene062883.t1 | AT5G65940 | 29.439 | 214 | 126 | 7 | 73 | 275 | 12 | 211 | 3.54e-11 | 63.9 |
| MS.gene062883.t1 | AT5G65940 | 29.439 | 214 | 126 | 7 | 73 | 275 | 12 | 211 | 4.36e-11 | 63.9 |
| MS.gene062883.t1 | AT5G65940 | 29.439 | 214 | 126 | 7 | 73 | 275 | 12 | 211 | 4.36e-11 | 63.9 |
| MS.gene062883.t1 | AT5G65940 | 29.439 | 214 | 126 | 7 | 73 | 275 | 12 | 211 | 4.79e-11 | 63.5 |
Find 80 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCATTGCAATTACTGGTTT+TGG | 0.240337 | 8.2:-36839348 | None:intergenic |
| GGCTGTTGAAGCAGAGAAAA+TGG | 0.259099 | 8.2:+36839867 | MS.gene062883:CDS |
| CCTTAATGTGTTAGACTTGC+AGG | 0.280510 | 8.2:+36838784 | MS.gene062883:CDS |
| GATAGTACCATTGCAATTAC+TGG | 0.296354 | 8.2:-36839354 | None:intergenic |
| GCAGCAGATAATGCTATCTT+TGG | 0.320415 | 8.2:+36839513 | MS.gene062883:CDS |
| TTCCTTCTCATGATGTTGTT+TGG | 0.337790 | 8.2:+36837672 | MS.gene062883:CDS |
| TCAAGTTACCAACGTGTTCA+TGG | 0.366573 | 8.2:+36837644 | MS.gene062883:CDS |
| TGACGGGCACGCTGGACTTC+AGG | 0.368255 | 8.2:+36840344 | MS.gene062883:CDS |
| AATGCTATCTTTGGCCAAAC+TGG | 0.368332 | 8.2:+36839522 | MS.gene062883:CDS |
| CCTGCAAGTCTAACACATTA+AGG | 0.368951 | 8.2:-36838784 | None:intergenic |
| GCAGGGTATGCTGTTGGAGG+AGG | 0.377182 | 8.2:+36839456 | MS.gene062883:CDS |
| AAATAGCCCAACCGCAATTC+GGG | 0.383989 | 8.2:+36840293 | MS.gene062883:CDS |
| GGGAGCTTTGATGCTGGTTA+TGG | 0.384393 | 8.2:+36839681 | MS.gene062883:CDS |
| TTATGTCAATTATAGGAAAT+GGG | 0.391046 | 8.2:+36840491 | MS.gene062883:intron |
| GTTTCTCACAAGGTTCTATA+CGG | 0.403885 | 8.2:+36839846 | MS.gene062883:CDS |
| CTAACATTAACACAGGTTGC+AGG | 0.410643 | 8.2:+36839438 | MS.gene062883:intron |
| TATTCTGATCATGAAAATAT+CGG | 0.418618 | 8.2:+36838758 | MS.gene062883:CDS |
| GAAATAGCCCAACCGCAATT+CGG | 0.424489 | 8.2:+36840292 | MS.gene062883:CDS |
| GAAGCACCTTAGGACCAGTT+TGG | 0.426368 | 8.2:-36839536 | None:intergenic |
| AGGAGGGCATATATTGCATA+TGG | 0.429416 | 8.2:+36839473 | MS.gene062883:CDS |
| TTCTCATGATGTTGTTTGGA+AGG | 0.432166 | 8.2:+36837676 | MS.gene062883:CDS |
| ATGTCTTTGTTGTTTGCCAT+TGG | 0.466222 | 8.2:-36837521 | None:intergenic |
| TTGAGAACCCGAATTGCGGT+TGG | 0.473250 | 8.2:-36840300 | None:intergenic |
| CGAAAAGCATTCCTTCTCTC+AGG | 0.474072 | 8.2:-36837995 | None:intergenic |
| CTATTAATGCAGTGGATGAC+GGG | 0.487601 | 8.2:+36840328 | MS.gene062883:CDS |
| AAGTTCTATCATGTCACGTT+TGG | 0.491658 | 8.2:+36839704 | MS.gene062883:CDS |
| CTGGTACAACAGTATTGATA+AGG | 0.497909 | 8.2:-36839891 | None:intergenic |
| GCTATTAATGCAGTGGATGA+CGG | 0.498064 | 8.2:+36840327 | MS.gene062883:CDS |
| TGAGAACCCGAATTGCGGTT+GGG | 0.503855 | 8.2:-36840299 | None:intergenic |
| AAGAAACAATCAAATGGTGT+AGG | 0.506674 | 8.2:+36840259 | MS.gene062883:CDS |
| TCATGATCAGAATAACCATC+TGG | 0.512939 | 8.2:-36838749 | None:intergenic |
| CTTTGGCCAAACTGGTCCTA+AGG | 0.517904 | 8.2:+36839530 | MS.gene062883:CDS |
| TTGATGTTGGAGAGGAAACA+AGG | 0.525526 | 8.2:-36837583 | None:intergenic |
| CTTGGCAATTCCTTCACCAA+CGG | 0.525754 | 8.2:-36837756 | None:intergenic |
| GCTGTTGAAGCAGAGAAAAT+GGG | 0.526704 | 8.2:+36839868 | MS.gene062883:CDS |
| TTCAGATGATGATGAAGGAA+AGG | 0.527599 | 8.2:+36837706 | MS.gene062883:CDS |
| GTTGGTGTCATCATTCTCAC+TGG | 0.529021 | 8.2:+36838076 | MS.gene062883:CDS |
| ATTCCTTCAGATGATGATGA+AGG | 0.536133 | 8.2:+36837701 | MS.gene062883:CDS |
| TGGAGAGGAAACAAGGTGGT+TGG | 0.539271 | 8.2:-36837576 | None:intergenic |
| GGTGGTGGTGATATTGATGT+TGG | 0.539487 | 8.2:-36837596 | None:intergenic |
| AACCGCAATTCGGGTTCTCA+AGG | 0.543466 | 8.2:+36840302 | MS.gene062883:CDS |
| AGAAACAATCAAATGGTGTA+GGG | 0.550444 | 8.2:+36840260 | MS.gene062883:CDS |
| TTTCCTTCATCATCATCTGA+AGG | 0.551061 | 8.2:-36837704 | None:intergenic |
| AAGGTTGGGAGCTTTGATGC+TGG | 0.551127 | 8.2:+36839675 | MS.gene062883:intron |
| CAGGTTGCAGGGTATGCTGT+TGG | 0.551508 | 8.2:+36839450 | MS.gene062883:intron |
| CAGGGTATGCTGTTGGAGGA+GGG | 0.554607 | 8.2:+36839457 | MS.gene062883:CDS |
| GGCACTGAAGAAGCAAATGA+AGG | 0.554741 | 8.2:+36840539 | MS.gene062883:CDS |
| CATCTGGAGTCCTCAAGGCT+TGG | 0.556853 | 8.2:-36838733 | None:intergenic |
| GATAGCATTATCTGCTGCAA+TGG | 0.558797 | 8.2:-36839508 | None:intergenic |
| TATGAGAAATCCGTTGGTGA+AGG | 0.569437 | 8.2:+36837746 | MS.gene062883:CDS |
| TAACATTAACACAGGTTGCA+GGG | 0.569695 | 8.2:+36839439 | MS.gene062883:intron |
| GTTGCAGGGTATGCTGTTGG+AGG | 0.577134 | 8.2:+36839453 | MS.gene062883:CDS |
| GCTAGAGATGATCCCTCTGT+TGG | 0.578549 | 8.2:+36838058 | MS.gene062883:CDS |
| ATAACCATCTGGAGTCCTCA+AGG | 0.585989 | 8.2:-36838738 | None:intergenic |
| AAGGAAATAAGTTGAGGTGG+TGG | 0.591859 | 8.2:-36837611 | None:intergenic |
| GTGAAATGTGGTTTCTCACA+AGG | 0.596317 | 8.2:+36839836 | MS.gene062883:CDS |
| GGAACAGATGCGTTCTGTAG+TGG | 0.596532 | 8.2:+36838704 | MS.gene062883:CDS |
| CGTTGGTGAAGGAATTGCCA+AGG | 0.597323 | 8.2:+36837757 | MS.gene062883:CDS |
| CAAGGCAGCTATTAATGCAG+TGG | 0.600034 | 8.2:+36840320 | MS.gene062883:CDS |
| TGTCATCATTCTCACTGGAA+AGG | 0.600797 | 8.2:+36838081 | MS.gene062883:CDS |
| TTCCAAACAACATCATGAGA+AGG | 0.606798 | 8.2:-36837674 | None:intergenic |
| TGCCTTGAGAACCCGAATTG+CGG | 0.609132 | 8.2:-36840304 | None:intergenic |
| GCAGTGGATGACGGGCACGC+TGG | 0.611049 | 8.2:+36840336 | MS.gene062883:CDS |
| TGTCAATTATAGGAAATGGG+TGG | 0.612210 | 8.2:+36840494 | MS.gene062883:intron |
| CACAAGGAAATAAGTTGAGG+TGG | 0.624126 | 8.2:-36837614 | None:intergenic |
| AGAATGATGACACCAACAGA+GGG | 0.629795 | 8.2:-36838070 | None:intergenic |
| CAAGCCTTGAGGACTCCAGA+TGG | 0.630119 | 8.2:+36838734 | MS.gene062883:CDS |
| TCCAAAACCAGTAATTGCAA+TGG | 0.632257 | 8.2:+36839347 | MS.gene062883:CDS |
| GAGAATGATGACACCAACAG+AGG | 0.638786 | 8.2:-36838071 | None:intergenic |
| ATCAGCTCCTTAATCGTGTG+AGG | 0.645905 | 8.2:-36838019 | None:intergenic |
| GTATTAATAGGCCTGAGAGA+AGG | 0.646223 | 8.2:+36837984 | MS.gene062883:CDS |
| TGACACAAGGAAATAAGTTG+AGG | 0.649038 | 8.2:-36837617 | None:intergenic |
| ATTGTCTATGAGAAATCCGT+TGG | 0.649414 | 8.2:+36837740 | MS.gene062883:CDS |
| ACAGATGCGTTCTGTAGTGG+TGG | 0.672100 | 8.2:+36838707 | MS.gene062883:CDS |
| TGGTGATATTGATGTTGGAG+AGG | 0.678621 | 8.2:-36837591 | None:intergenic |
| GCGTCTTCGCTCCATATATG+CGG | 0.682881 | 8.2:-36840567 | None:intergenic |
| GTAACTTGAAGTGTGACACA+AGG | 0.684211 | 8.2:-36837630 | None:intergenic |
| GAACATCACCATGAACACGT+TGG | 0.725959 | 8.2:-36837652 | None:intergenic |
| ATGTTGGAGAGGAAACAAGG+TGG | 0.769684 | 8.2:-36837580 | None:intergenic |
| GTGGTGGTGACCAAGCCTTG+AGG | 0.785466 | 8.2:+36838723 | MS.gene062883:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATAAATAACTTCAAATA+TGG | - | chr8.2:36837892-36837911 | None:intergenic | 10.0% |
| !!! | ATATATTGTCTTTAAAATTA+TGG | + | chr8.2:36839059-36839078 | MS.gene062883:intron | 10.0% |
| !! | TACAAATGTTAAAATGAAAA+TGG | - | chr8.2:36839571-36839590 | None:intergenic | 15.0% |
| !! | TATTAAACTTAGAAAAATCT+GGG | - | chr8.2:36840592-36840611 | None:intergenic | 15.0% |
| !! | TTACAAAACAATAAAGTAAA+TGG | - | chr8.2:36838126-36838145 | None:intergenic | 15.0% |
| !!! | AATTCAACATTGATATTTTA+TGG | + | chr8.2:36840518-36840537 | MS.gene062883:CDS | 15.0% |
| !! | CTATTAAACTTAGAAAAATC+TGG | - | chr8.2:36840593-36840612 | None:intergenic | 20.0% |
| !! | TAGAAAAAGAAACAATCAAA+TGG | + | chr8.2:36840253-36840272 | MS.gene062883:CDS | 20.0% |
| !! | TATTCTGATCATGAAAATAT+CGG | + | chr8.2:36838758-36838777 | MS.gene062883:CDS | 20.0% |
| !! | TTATGTCAATTATAGGAAAT+GGG | + | chr8.2:36840491-36840510 | MS.gene062883:intron | 20.0% |
| !! | TTTATGTCAATTATAGGAAA+TGG | + | chr8.2:36840490-36840509 | MS.gene062883:intron | 20.0% |
| !!! | AAGCACATTTTTTTATCTTT+TGG | - | chr8.2:36839787-36839806 | None:intergenic | 20.0% |
| !!! | AATGATATATTGATGATGTA+GGG | + | chr8.2:36838683-36838702 | MS.gene062883:intron | 20.0% |
| !!! | ACAATATATCAGTTTTTCAT+TGG | - | chr8.2:36839048-36839067 | None:intergenic | 20.0% |
| !!! | ATTTTTCTCATTACAAATCA+TGG | - | chr8.2:36839229-36839248 | None:intergenic | 20.0% |
| !!! | CATTATTAAACTTGTTTTAG+TGG | + | chr8.2:36840372-36840391 | MS.gene062883:intron | 20.0% |
| !!! | GTTGTTTTTATGTCAATTAT+AGG | + | chr8.2:36840484-36840503 | MS.gene062883:intron | 20.0% |
| !!! | TAATGATATATTGATGATGT+AGG | + | chr8.2:36838682-36838701 | MS.gene062883:intron | 20.0% |
| !!! | TAATTTTAGTTTCTCCTTTA+AGG | + | chr8.2:36839954-36839973 | MS.gene062883:intron | 20.0% |
| !!! | TAGAAAAATCTGGAATAAAT+CGG | - | chr8.2:36838816-36838835 | None:intergenic | 20.0% |
| !!! | TTTTGCAGATTAGTATTAAT+AGG | + | chr8.2:36837972-36837991 | MS.gene062883:intron | 20.0% |
| ! | AAGCAAAAAGAAAATGAGAA+AGG | - | chr8.2:36837794-36837813 | None:intergenic | 25.0% |
| ! | AATTCCAAACATAACCTTAA+AGG | - | chr8.2:36839971-36839990 | None:intergenic | 25.0% |
| ! | AATTTGAGGACTAAATTAAC+CGG | - | chr8.2:36838987-36839006 | None:intergenic | 25.0% |
| ! | ATAATGATTGGATTAACAAG+TGG | - | chr8.2:36838193-36838212 | None:intergenic | 25.0% |
| ! | GAGACTGTTTGTATAATTTA+GGG | + | chr8.2:36837925-36837944 | MS.gene062883:intron | 25.0% |
| ! | TCAAATATGGCAATTCAAAA+TGG | - | chr8.2:36837879-36837898 | None:intergenic | 25.0% |
| ! | TCTACTAAATTAGAGAACAT+TGG | - | chr8.2:36839114-36839133 | None:intergenic | 25.0% |
| ! | TGAGACTGTTTGTATAATTT+AGG | + | chr8.2:36837924-36837943 | MS.gene062883:intron | 25.0% |
| ! | TGCTGATAAAATAAAACCAA+TGG | - | chr8.2:36838306-36838325 | None:intergenic | 25.0% |
| ! | TTCACACAAATAGAAAAATC+TGG | - | chr8.2:36838826-36838845 | None:intergenic | 25.0% |
| ! | TTCATTATCATTGTATTGCA+TGG | + | chr8.2:36840133-36840152 | MS.gene062883:intron | 25.0% |
| ! | TTTCTCAAACAACATTATAC+TGG | - | chr8.2:36838932-36838951 | None:intergenic | 25.0% |
| !! | ACTAGTTGTATGATAATGAT+TGG | - | chr8.2:36838205-36838224 | None:intergenic | 25.0% |
| !! | TTATTTGCTAACATTAACAC+AGG | + | chr8.2:36839431-36839450 | MS.gene062883:intron | 25.0% |
| !!! | ATTGTTATTTCTCCAATTTG+AGG | + | chr8.2:36839138-36839157 | MS.gene062883:intron | 25.0% |
| !!! | GTATCTCTTTGTTATTTTTG+AGG | + | chr8.2:36838870-36838889 | MS.gene062883:intron | 25.0% |
| !!! | GTTAATGCAATGTTTTGATT+TGG | + | chr8.2:36840215-36840234 | MS.gene062883:intron | 25.0% |
| !!! | TTGTTATTTCTCCAATTTGA+GGG | + | chr8.2:36839139-36839158 | MS.gene062883:intron | 25.0% |
| AAAAATGTGCTTCTCAATAC+AGG | + | chr8.2:36839795-36839814 | MS.gene062883:intron | 30.0% | |
| AAAATTATGGTGCTTGATTC+TGG | + | chr8.2:36839072-36839091 | MS.gene062883:intron | 30.0% | |
| AAAGAGATACCTTGAGTAAT+GGG | - | chr8.2:36838860-36838879 | None:intergenic | 30.0% | |
| AACCATTCAATTCTGCATTA+AGG | - | chr8.2:36838661-36838680 | None:intergenic | 30.0% | |
| AAGAAACAATCAAATGGTGT+AGG | + | chr8.2:36840259-36840278 | MS.gene062883:CDS | 30.0% | |
| AGAAACAATCAAATGGTGTA+GGG | + | chr8.2:36840260-36840279 | MS.gene062883:CDS | 30.0% | |
| AGATGTTACAAAAGACGAAA+AGG | - | chr8.2:36839639-36839658 | None:intergenic | 30.0% | |
| AGGAGAAACTAAAATTACAG+TGG | - | chr8.2:36839951-36839970 | None:intergenic | 30.0% | |
| ATATGCATACATATGCTCTA+AGG | - | chr8.2:36840459-36840478 | None:intergenic | 30.0% | |
| ATCATATGATGCTTTCAGTA+CGG | + | chr8.2:36838408-36838427 | MS.gene062883:intron | 30.0% | |
| ATCCTTAATGCAGAATTGAA+TGG | + | chr8.2:36838656-36838675 | MS.gene062883:intron | 30.0% | |
| ATGTTACAAAAGACGAAAAG+GGG | - | chr8.2:36839637-36839656 | None:intergenic | 30.0% | |
| CAAAAAGAAAATGAGAAAGG+TGG | - | chr8.2:36837791-36837810 | None:intergenic | 30.0% | |
| GATGTTACAAAAGACGAAAA+GGG | - | chr8.2:36839638-36839657 | None:intergenic | 30.0% | |
| TAAGTCACATGACAAGTTAA+TGG | - | chr8.2:36838231-36838250 | None:intergenic | 30.0% | |
| TATGCATACATATGCTCTAA+GGG | - | chr8.2:36840458-36840477 | None:intergenic | 30.0% | |
| TCATGAAATGATCAACTTGA+TGG | + | chr8.2:36838362-36838381 | MS.gene062883:intron | 30.0% | |
| ! | ATTGGTTTCAACTGATGTTA+GGG | - | chr8.2:36839030-36839049 | None:intergenic | 30.0% |
| ! | GTCTAAGTTGAAGAAATGTT+GGG | + | chr8.2:36837947-36837966 | MS.gene062883:intron | 30.0% |
| ! | GTTTTCAAAACCAAACCATA+CGG | + | chr8.2:36838443-36838462 | MS.gene062883:intron | 30.0% |
| ! | TCATTCTTTTCTCCTATTAC+AGG | + | chr8.2:36839308-36839327 | MS.gene062883:intron | 30.0% |
| ! | TCTTGTCTTTGTATCGATAA+AGG | + | chr8.2:36839656-36839675 | MS.gene062883:intron | 30.0% |
| ! | TCTTTGTATCGATAAAGGTT+GGG | + | chr8.2:36839661-36839680 | MS.gene062883:intron | 30.0% |
| ! | TTTTGTCCGTCAAATTGTAA+GGG | + | chr8.2:36838961-36838980 | MS.gene062883:intron | 30.0% |
| ! | TTTTTGTCCGTCAAATTGTA+AGG | + | chr8.2:36838960-36838979 | MS.gene062883:intron | 30.0% |
| !! | TTATTTTATAGGGCATGTTG+AGG | + | chr8.2:36838149-36838168 | MS.gene062883:intron | 30.0% |
| !! | TTCTCCTTTAAGGTTATGTT+TGG | + | chr8.2:36839964-36839983 | MS.gene062883:intron | 30.0% |
| !! | TTGTTTTGTTCAAGTGACTT+TGG | + | chr8.2:36838275-36838294 | MS.gene062883:intron | 30.0% |
| !!! | TTTTGAGGCATTCATTTCAA+TGG | + | chr8.2:36838885-36838904 | MS.gene062883:intron | 30.0% |
| AAAGTGATTCCCATTACTCA+AGG | + | chr8.2:36838848-36838867 | MS.gene062883:intron | 35.0% | |
| AAGAAAATGAGAAAGGTGGA+AGG | - | chr8.2:36837787-36837806 | None:intergenic | 35.0% | |
| AAGTTCTATCATGTCACGTT+TGG | + | chr8.2:36839704-36839723 | MS.gene062883:CDS | 35.0% | |
| ACTATTACTCTCTCTTAGCT+AGG | + | chr8.2:36837852-36837871 | MS.gene062883:intron | 35.0% | |
| AGTGACTTTGGATATTCCAT+TGG | + | chr8.2:36838287-36838306 | MS.gene062883:intron | 35.0% | |
| ATTGTCTATGAGAAATCCGT+TGG | + | chr8.2:36837740-36837759 | MS.gene062883:CDS | 35.0% | |
| CAAAGAGATACCTTGAGTAA+TGG | - | chr8.2:36838861-36838880 | None:intergenic | 35.0% | |
| GATAGTACCATTGCAATTAC+TGG | - | chr8.2:36839357-36839376 | None:intergenic | 35.0% | |
| GTCTTAAGTGACAAACTACA+TGG | - | chr8.2:36838629-36838648 | None:intergenic | 35.0% | |
| GTGCACAAAAAAGTGAGATT+TGG | - | chr8.2:36839390-36839409 | None:intergenic | 35.0% | |
| GTTTCTCACAAGGTTCTATA+CGG | + | chr8.2:36839846-36839865 | MS.gene062883:CDS | 35.0% | |
| TAACATTAACACAGGTTGCA+GGG | + | chr8.2:36839439-36839458 | MS.gene062883:intron | 35.0% | |
| TAGTCCTCAAATTCACGAAA+TGG | + | chr8.2:36838994-36839013 | MS.gene062883:intron | 35.0% | |
| TCATGATCAGAATAACCATC+TGG | - | chr8.2:36838752-36838771 | None:intergenic | 35.0% | |
| TCCAAAACCAGTAATTGCAA+TGG | + | chr8.2:36839347-36839366 | MS.gene062883:CDS | 35.0% | |
| TGAAGGAAAAACCGCATATA+TGG | + | chr8.2:36840556-36840575 | MS.gene062883:CDS | 35.0% | |
| TGACACAAGGAAATAAGTTG+AGG | - | chr8.2:36837620-36837639 | None:intergenic | 35.0% | |
| TGAGTGTTCTATGAATGGAA+TGG | - | chr8.2:36839928-36839947 | None:intergenic | 35.0% | |
| TGTCAATTATAGGAAATGGG+TGG | + | chr8.2:36840494-36840513 | MS.gene062883:intron | 35.0% | |
| TTCCAAACAACATCATGAGA+AGG | - | chr8.2:36837677-36837696 | None:intergenic | 35.0% | |
| TTCCTTCTCATGATGTTGTT+TGG | + | chr8.2:36837672-36837691 | MS.gene062883:CDS | 35.0% | |
| TTGGTTTCAACTGATGTTAG+GGG | - | chr8.2:36839029-36839048 | None:intergenic | 35.0% | |
| TTTCATGACAAGTGACAACA+TGG | - | chr8.2:36838350-36838369 | None:intergenic | 35.0% | |
| TTTCCTTCATCATCATCTGA+AGG | - | chr8.2:36837707-36837726 | None:intergenic | 35.0% | |
| ! | AAATAATTTGCAGCTGCAGA+AGG | - | chr8.2:36839417-36839436 | None:intergenic | 35.0% |
| ! | ATTCCTTCAGATGATGATGA+AGG | + | chr8.2:36837701-36837720 | MS.gene062883:CDS | 35.0% |
| ! | ATTGCCATTTCGTGAATTTG+AGG | - | chr8.2:36839001-36839020 | None:intergenic | 35.0% |
| ! | CTAAAAAAGCACGTGAAATG+TGG | + | chr8.2:36839824-36839843 | MS.gene062883:CDS | 35.0% |
| ! | GCAAATTATTGAAGCACCTT+AGG | - | chr8.2:36839549-36839568 | None:intergenic | 35.0% |
| ! | GGTCTAAGTTGAAGAAATGT+TGG | + | chr8.2:36837946-36837965 | MS.gene062883:intron | 35.0% |
| ! | GTCTTTGTATCGATAAAGGT+TGG | + | chr8.2:36839660-36839679 | MS.gene062883:intron | 35.0% |
| ! | TTCAGATGATGATGAAGGAA+AGG | + | chr8.2:36837706-36837725 | MS.gene062883:CDS | 35.0% |
| ! | TTCTCATGATGTTGTTTGGA+AGG | + | chr8.2:36837676-36837695 | MS.gene062883:CDS | 35.0% |
| !! | CATTGGTTTCAACTGATGTT+AGG | - | chr8.2:36839031-36839050 | None:intergenic | 35.0% |
| !! | CTGGTACAACAGTATTGATA+AGG | - | chr8.2:36839894-36839913 | None:intergenic | 35.0% |
| !!! | ACCATTGCAATTACTGGTTT+TGG | - | chr8.2:36839351-36839370 | None:intergenic | 35.0% |
| !!! | CACATTTCACGTGCTTTTTT+AGG | - | chr8.2:36839826-36839845 | None:intergenic | 35.0% |
| !!! | TTGCAATTACTGGTTTTGGA+AGG | - | chr8.2:36839347-36839366 | None:intergenic | 35.0% |
| AATGCTATCTTTGGCCAAAC+TGG | + | chr8.2:36839522-36839541 | MS.gene062883:CDS | 40.0% | |
| AGAATGATGACACCAACAGA+GGG | - | chr8.2:36838073-36838092 | None:intergenic | 40.0% | |
| AGTGGTGAGTGTTCTATGAA+TGG | - | chr8.2:36839933-36839952 | None:intergenic | 40.0% | |
| ATGTGCTTCTCAATACAGGT+AGG | + | chr8.2:36839799-36839818 | MS.gene062883:intron | 40.0% | |
| CCTGCAAGTCTAACACATTA+AGG | - | chr8.2:36838787-36838806 | None:intergenic | 40.0% | |
| CCTTAATGTGTTAGACTTGC+AGG | + | chr8.2:36838784-36838803 | MS.gene062883:CDS | 40.0% | |
| CCTTGAACTAGACTTTACTG+CGG | + | chr8.2:36838480-36838499 | MS.gene062883:intron | 40.0% | |
| CTAACATTAACACAGGTTGC+AGG | + | chr8.2:36839438-36839457 | MS.gene062883:intron | 40.0% | |
| CTATTAATGCAGTGGATGAC+GGG | + | chr8.2:36840328-36840347 | MS.gene062883:CDS | 40.0% | |
| GATAGCATTATCTGCTGCAA+TGG | - | chr8.2:36839511-36839530 | None:intergenic | 40.0% | |
| GCAGCAGATAATGCTATCTT+TGG | + | chr8.2:36839513-36839532 | MS.gene062883:CDS | 40.0% | |
| GCTATTAATGCAGTGGATGA+CGG | + | chr8.2:36840327-36840346 | MS.gene062883:CDS | 40.0% | |
| GCTGTTGAAGCAGAGAAAAT+GGG | + | chr8.2:36839868-36839887 | MS.gene062883:CDS | 40.0% | |
| GGATTTGAACTGCTTGAACT+TGG | - | chr8.2:36838523-36838542 | None:intergenic | 40.0% | |
| GGCAATTTAGTCCCTCAAAT+TGG | - | chr8.2:36839153-36839172 | None:intergenic | 40.0% | |
| GTAAATGGCAGTAGCAGAAA+AGG | - | chr8.2:36838111-36838130 | None:intergenic | 40.0% | |
| GTAACTTGAAGTGTGACACA+AGG | - | chr8.2:36837633-36837652 | None:intergenic | 40.0% | |
| GTATTAATAGGCCTGAGAGA+AGG | + | chr8.2:36837984-36838003 | MS.gene062883:CDS | 40.0% | |
| GTGAAATGTGGTTTCTCACA+AGG | + | chr8.2:36839836-36839855 | MS.gene062883:CDS | 40.0% | |
| TACAAAAGACGAAAAGGGGA+TGG | - | chr8.2:36839633-36839652 | None:intergenic | 40.0% | |
| TCAAGTTACCAACGTGTTCA+TGG | + | chr8.2:36837644-36837663 | MS.gene062883:CDS | 40.0% | |
| TGGAATGGAAAGAAGCTTAC+TGG | - | chr8.2:36839913-36839932 | None:intergenic | 40.0% | |
| TGGTGATATTGATGTTGGAG+AGG | - | chr8.2:36837594-36837613 | None:intergenic | 40.0% | |
| TGTCATCATTCTCACTGGAA+AGG | + | chr8.2:36838081-36838100 | MS.gene062883:CDS | 40.0% | |
| TTGATGTTGGAGAGGAAACA+AGG | - | chr8.2:36837586-36837605 | None:intergenic | 40.0% | |
| ! | AAGGAAATAAGTTGAGGTGG+TGG | - | chr8.2:36837614-36837633 | None:intergenic | 40.0% |
| ! | AGGAGGGCATATATTGCATA+TGG | + | chr8.2:36839473-36839492 | MS.gene062883:CDS | 40.0% |
| ! | AGTCTAGTTCAAGGTTCAAC+CGG | - | chr8.2:36838474-36838493 | None:intergenic | 40.0% |
| ! | CACAAGGAAATAAGTTGAGG+TGG | - | chr8.2:36837617-36837636 | None:intergenic | 40.0% |
| ! | TATGAGAAATCCGTTGGTGA+AGG | + | chr8.2:36837746-36837765 | MS.gene062883:CDS | 40.0% |
| ! | TTTTCGACCTCACACGATTA+AGG | + | chr8.2:36838012-36838031 | MS.gene062883:CDS | 40.0% |
| !! | CATACATATGCTCTAAGGGA+AGG | - | chr8.2:36840454-36840473 | None:intergenic | 40.0% |
| !! | CCTTTGACTTGAGACTTGTT+GGG | - | chr8.2:36839174-36839193 | None:intergenic | 40.0% |
| !! | TCCTTTGACTTGAGACTTGT+TGG | - | chr8.2:36839175-36839194 | None:intergenic | 40.0% |
| !!! | CAATTACTGGTTTTGGAAGG+CGG | - | chr8.2:36839344-36839363 | None:intergenic | 40.0% |
| AAATAGCCCAACCGCAATTC+GGG | + | chr8.2:36840293-36840312 | MS.gene062883:CDS | 45.0% | |
| AACCGGCCCTTACAATTTGA+CGG | - | chr8.2:36838970-36838989 | None:intergenic | 45.0% | |
| ACCAAACCATACGGTTCAAC+CGG | + | chr8.2:36838452-36838471 | MS.gene062883:intron | 45.0% | |
| AGACATTCGAACGCGAGAAA+TGG | - | chr8.2:36840005-36840024 | None:intergenic | 45.0% | |
| ATCAGCTCCTTAATCGTGTG+AGG | - | chr8.2:36838022-36838041 | None:intergenic | 45.0% | |
| ATGTTGGAGAGGAAACAAGG+TGG | - | chr8.2:36837583-36837602 | None:intergenic | 45.0% | |
| ATTCGAACGCGAGAAATGGA+AGG | - | chr8.2:36840001-36840020 | None:intergenic | 45.0% | |
| CAAGGCAGCTATTAATGCAG+TGG | + | chr8.2:36840320-36840339 | MS.gene062883:CDS | 45.0% | |
| CCCAACAAGTCTCAAGTCAA+AGG | + | chr8.2:36839171-36839190 | MS.gene062883:intron | 45.0% | |
| CTTGGCAATTCCTTCACCAA+CGG | - | chr8.2:36837759-36837778 | None:intergenic | 45.0% | |
| GAAATAGCCCAACCGCAATT+CGG | + | chr8.2:36840292-36840311 | MS.gene062883:CDS | 45.0% | |
| GAACATCACCATGAACACGT+TGG | - | chr8.2:36837655-36837674 | None:intergenic | 45.0% | |
| GAGAATGATGACACCAACAG+AGG | - | chr8.2:36838074-36838093 | None:intergenic | 45.0% | |
| GCTTGAACTTGGACGAAACT+GGG | - | chr8.2:36838512-36838531 | None:intergenic | 45.0% | |
| GGCTGTTGAAGCAGAGAAAA+TGG | + | chr8.2:36839867-36839886 | MS.gene062883:CDS | 45.0% | |
| TGCTTGAACTTGGACGAAAC+TGG | - | chr8.2:36838513-36838532 | None:intergenic | 45.0% | |
| ! | ATAACCATCTGGAGTCCTCA+AGG | - | chr8.2:36838741-36838760 | None:intergenic | 45.0% |
| ! | CCGCAGTAAAGTCTAGTTCA+AGG | - | chr8.2:36838483-36838502 | None:intergenic | 45.0% |
| ! | CTATCATGTCACGTTTGGTG+AGG | + | chr8.2:36839709-36839728 | MS.gene062883:intron | 45.0% |
| ! | GGCACTGAAGAAGCAAATGA+AGG | + | chr8.2:36840539-36840558 | MS.gene062883:CDS | 45.0% |
| ! | GGTGGTGGTGATATTGATGT+TGG | - | chr8.2:36837599-36837618 | None:intergenic | 45.0% |
| !! | CGAAAAGCATTCCTTCTCTC+AGG | - | chr8.2:36837998-36838017 | None:intergenic | 45.0% |
| !! | GTTGGTGTCATCATTCTCAC+TGG | + | chr8.2:36838076-36838095 | MS.gene062883:CDS | 45.0% |
| !!! | TTTGTAAAATTTATTTTATA+GGG | + | chr8.2:36838139-36838158 | MS.gene062883:intron | 5.0% |
| !!! | TTTTGTAAAATTTATTTTAT+AGG | + | chr8.2:36838138-36838157 | MS.gene062883:intron | 5.0% |
| AATCCGTTGACGTGACTCAG+AGG | + | chr8.2:36838538-36838557 | MS.gene062883:intron | 50.0% | |
| ACAGATGCGTTCTGTAGTGG+TGG | + | chr8.2:36838707-36838726 | MS.gene062883:CDS | 50.0% | |
| ACCGGTTGAACCGTATGGTT+TGG | - | chr8.2:36838456-36838475 | None:intergenic | 50.0% | |
| AGACCTCTGAGTCACGTCAA+CGG | - | chr8.2:36838544-36838563 | None:intergenic | 50.0% | |
| CTTTGGCCAAACTGGTCCTA+AGG | + | chr8.2:36839530-36839549 | MS.gene062883:CDS | 50.0% | |
| GAAAGGTGGAAGGACAACCT+TGG | - | chr8.2:36837777-36837796 | None:intergenic | 50.0% | |
| GCGTCTTCGCTCCATATATG+CGG | - | chr8.2:36840570-36840589 | None:intergenic | 50.0% | |
| GCTAGAGATGATCCCTCTGT+TGG | + | chr8.2:36838058-36838077 | MS.gene062883:CDS | 50.0% | |
| GGAACAGATGCGTTCTGTAG+TGG | + | chr8.2:36838704-36838723 | MS.gene062883:CDS | 50.0% | |
| GGCGAATCTGCACCTGTAAT+AGG | - | chr8.2:36839323-36839342 | None:intergenic | 50.0% | |
| GGGCATGTTGAGGCAAGAAA+TGG | + | chr8.2:36838159-36838178 | MS.gene062883:intron | 50.0% | |
| GTCCGTCAAATTGTAAGGGC+CGG | + | chr8.2:36838965-36838984 | MS.gene062883:intron | 50.0% | |
| GTTCAACCGGTTGAACCGTA+TGG | - | chr8.2:36838461-36838480 | None:intergenic | 50.0% | |
| TGAGAACCCGAATTGCGGTT+GGG | - | chr8.2:36840302-36840321 | None:intergenic | 50.0% | |
| TGCCTTGAGAACCCGAATTG+CGG | - | chr8.2:36840307-36840326 | None:intergenic | 50.0% | |
| TGGAGAGGAAACAAGGTGGT+TGG | - | chr8.2:36837579-36837598 | None:intergenic | 50.0% | |
| TTGAGAACCCGAATTGCGGT+TGG | - | chr8.2:36840303-36840322 | None:intergenic | 50.0% | |
| ! | AACCGCAATTCGGGTTCTCA+AGG | + | chr8.2:36840302-36840321 | MS.gene062883:CDS | 50.0% |
| ! | AAGGTTGGGAGCTTTGATGC+TGG | + | chr8.2:36839675-36839694 | MS.gene062883:intron | 50.0% |
| ! | CGTTGGTGAAGGAATTGCCA+AGG | + | chr8.2:36837757-36837776 | MS.gene062883:CDS | 50.0% |
| ! | GAAGCACCTTAGGACCAGTT+TGG | - | chr8.2:36839539-36839558 | None:intergenic | 50.0% |
| ! | GGGAGCTTTGATGCTGGTTA+TGG | + | chr8.2:36839681-36839700 | MS.gene062883:CDS | 50.0% |
| CAAGCCTTGAGGACTCCAGA+TGG | + | chr8.2:36838734-36838753 | MS.gene062883:CDS | 55.0% | |
| CAGGGTATGCTGTTGGAGGA+GGG | + | chr8.2:36839457-36839476 | MS.gene062883:CDS | 55.0% | |
| CAGGTTGCAGGGTATGCTGT+TGG | + | chr8.2:36839450-36839469 | MS.gene062883:intron | 55.0% | |
| GTTGCAGGGTATGCTGTTGG+AGG | + | chr8.2:36839453-36839472 | MS.gene062883:CDS | 55.0% | |
| ! | CATCTGGAGTCCTCAAGGCT+TGG | - | chr8.2:36838736-36838755 | None:intergenic | 55.0% |
| GCAGGGTATGCTGTTGGAGG+AGG | + | chr8.2:36839456-36839475 | MS.gene062883:CDS | 60.0% | |
| ! | GTGGTGGTGACCAAGCCTTG+AGG | + | chr8.2:36838723-36838742 | MS.gene062883:CDS | 60.0% |
| ! | TGACGGGCACGCTGGACTTC+AGG | + | chr8.2:36840344-36840363 | MS.gene062883:CDS | 65.0% |
| !! | GCAGTGGATGACGGGCACGC+TGG | + | chr8.2:36840336-36840355 | MS.gene062883:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 36837524 | 36840622 | 36837524 | ID=MS.gene062883 |
| chr8.2 | mRNA | 36837524 | 36840622 | 36837524 | ID=MS.gene062883.t1;Parent=MS.gene062883 |
| chr8.2 | exon | 36837524 | 36837778 | 36837524 | ID=MS.gene062883.t1.exon1;Parent=MS.gene062883.t1 |
| chr8.2 | CDS | 36837524 | 36837778 | 36837524 | ID=cds.MS.gene062883.t1;Parent=MS.gene062883.t1 |
| chr8.2 | exon | 36837980 | 36838102 | 36837980 | ID=MS.gene062883.t1.exon2;Parent=MS.gene062883.t1 |
| chr8.2 | CDS | 36837980 | 36838102 | 36837980 | ID=cds.MS.gene062883.t1;Parent=MS.gene062883.t1 |
| chr8.2 | exon | 36838704 | 36838805 | 36838704 | ID=MS.gene062883.t1.exon3;Parent=MS.gene062883.t1 |
| chr8.2 | CDS | 36838704 | 36838805 | 36838704 | ID=cds.MS.gene062883.t1;Parent=MS.gene062883.t1 |
| chr8.2 | exon | 36839330 | 36839368 | 36839330 | ID=MS.gene062883.t1.exon4;Parent=MS.gene062883.t1 |
| chr8.2 | CDS | 36839330 | 36839368 | 36839330 | ID=cds.MS.gene062883.t1;Parent=MS.gene062883.t1 |
| chr8.2 | exon | 36839453 | 36839551 | 36839453 | ID=MS.gene062883.t1.exon5;Parent=MS.gene062883.t1 |
| chr8.2 | CDS | 36839453 | 36839551 | 36839453 | ID=cds.MS.gene062883.t1;Parent=MS.gene062883.t1 |
| chr8.2 | exon | 36839678 | 36839725 | 36839678 | ID=MS.gene062883.t1.exon6;Parent=MS.gene062883.t1 |
| chr8.2 | CDS | 36839678 | 36839725 | 36839678 | ID=cds.MS.gene062883.t1;Parent=MS.gene062883.t1 |
| chr8.2 | exon | 36839817 | 36839912 | 36839817 | ID=MS.gene062883.t1.exon7;Parent=MS.gene062883.t1 |
| chr8.2 | CDS | 36839817 | 36839912 | 36839817 | ID=cds.MS.gene062883.t1;Parent=MS.gene062883.t1 |
| chr8.2 | exon | 36840243 | 36840365 | 36840243 | ID=MS.gene062883.t1.exon8;Parent=MS.gene062883.t1 |
| chr8.2 | CDS | 36840243 | 36840365 | 36840243 | ID=cds.MS.gene062883.t1;Parent=MS.gene062883.t1 |
| chr8.2 | exon | 36840506 | 36840622 | 36840506 | ID=MS.gene062883.t1.exon9;Parent=MS.gene062883.t1 |
| chr8.2 | CDS | 36840506 | 36840622 | 36840506 | ID=cds.MS.gene062883.t1;Parent=MS.gene062883.t1 |
| Gene Sequence |
| Protein sequence |
