Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69174.t1 | XP_013455454.1 | 97.2 | 108 | 2 | 1 | 1 | 107 | 1 | 108 | 5.00E-47 | 196.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69174.t1 | P31336 | 55.7 | 106 | 45 | 2 | 1 | 106 | 1 | 104 | 2.0e-20 | 99.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69174.t1 | I3T741 | 97.2 | 108 | 2 | 1 | 1 | 107 | 1 | 108 | 3.6e-47 | 196.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene69174 | 0.823492 | 1.35E-53 | -1.69E-46 |
| MS.gene049346 | MS.gene69174 | 0.839713 | 1.34E-57 | -1.69E-46 |
| MS.gene049351 | MS.gene69174 | 0.812388 | 4.35E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene69174 | 0.804384 | 2.22E-49 | -1.69E-46 |
| MS.gene049491 | MS.gene69174 | 0.85343 | 2.40E-61 | -1.69E-46 |
| MS.gene049599 | MS.gene69174 | -0.803258 | 3.80E-49 | -1.69E-46 |
| MS.gene049661 | MS.gene69174 | 0.866012 | 3.89E-65 | -1.69E-46 |
| MS.gene049662 | MS.gene69174 | 0.857478 | 1.59E-62 | -1.69E-46 |
| MS.gene049758 | MS.gene69174 | 0.869596 | 2.75E-66 | -1.69E-46 |
| MS.gene049910 | MS.gene69174 | 0.801134 | 1.04E-48 | -1.69E-46 |
| MS.gene050076 | MS.gene69174 | 0.858859 | 6.17E-63 | -1.69E-46 |
| MS.gene050099 | MS.gene69174 | 0.807759 | 4.32E-50 | -1.69E-46 |
| MS.gene050128 | MS.gene69174 | 0.842406 | 2.64E-58 | -1.69E-46 |
| MS.gene050301 | MS.gene69174 | 0.862387 | 5.25E-64 | -1.69E-46 |
| MS.gene050397 | MS.gene69174 | 0.861099 | 1.30E-63 | -1.69E-46 |
| MS.gene050404 | MS.gene69174 | 0.831845 | 1.33E-55 | -1.69E-46 |
| MS.gene050406 | MS.gene69174 | 0.82764 | 1.40E-54 | -1.69E-46 |
| MS.gene050432 | MS.gene69174 | 0.862765 | 4.02E-64 | -1.69E-46 |
| MS.gene050464 | MS.gene69174 | 0.828899 | 6.96E-55 | -1.69E-46 |
| MS.gene050529 | MS.gene69174 | 0.83649 | 9.08E-57 | -1.69E-46 |
| MS.gene050767 | MS.gene69174 | 0.824301 | 8.69E-54 | -1.69E-46 |
| MS.gene050770 | MS.gene69174 | 0.825371 | 4.86E-54 | -1.69E-46 |
| MS.gene05101 | MS.gene69174 | 0.878538 | 2.59E-69 | -1.69E-46 |
| MS.gene051471 | MS.gene69174 | 0.84947 | 3.17E-60 | -1.69E-46 |
| MS.gene051582 | MS.gene69174 | 0.822527 | 2.26E-53 | -1.69E-46 |
| MS.gene051663 | MS.gene69174 | 0.808905 | 2.46E-50 | -1.69E-46 |
| MS.gene051692 | MS.gene69174 | 0.84297 | 1.87E-58 | -1.69E-46 |
| MS.gene051860 | MS.gene69174 | 0.803408 | 3.54E-49 | -1.69E-46 |
| MS.gene051877 | MS.gene69174 | 0.803092 | 4.11E-49 | -1.69E-46 |
| MS.gene052078 | MS.gene69174 | 0.880315 | 6.07E-70 | -1.69E-46 |
| MS.gene052178 | MS.gene69174 | 0.863129 | 3.10E-64 | -1.69E-46 |
| MS.gene052188 | MS.gene69174 | 0.840961 | 6.34E-58 | -1.69E-46 |
| MS.gene052253 | MS.gene69174 | 0.831122 | 2.00E-55 | -1.69E-46 |
| MS.gene052287 | MS.gene69174 | 0.830926 | 2.23E-55 | -1.69E-46 |
| MS.gene052290 | MS.gene69174 | 0.809736 | 1.63E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene69174 | 0.857898 | 1.19E-62 | -1.69E-46 |
| MS.gene052322 | MS.gene69174 | 0.845355 | 4.28E-59 | -1.69E-46 |
| MS.gene052326 | MS.gene69174 | 0.838893 | 2.19E-57 | -1.69E-46 |
| MS.gene052340 | MS.gene69174 | 0.870619 | 1.27E-66 | -1.69E-46 |
| MS.gene052344 | MS.gene69174 | -0.802504 | 5.44E-49 | -1.69E-46 |
| MS.gene052481 | MS.gene69174 | 0.828725 | 7.66E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene69174 | 0.820604 | 6.28E-53 | -1.69E-46 |
| MS.gene052485 | MS.gene69174 | 0.834282 | 3.28E-56 | -1.69E-46 |
| MS.gene053103 | MS.gene69174 | 0.815013 | 1.15E-51 | -1.69E-46 |
| MS.gene053181 | MS.gene69174 | 0.821533 | 3.84E-53 | -1.69E-46 |
| MS.gene053209 | MS.gene69174 | 0.882378 | 1.10E-70 | -1.69E-46 |
| MS.gene053322 | MS.gene69174 | 0.81346 | 2.53E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene69174 | 0.845136 | 4.90E-59 | -1.69E-46 |
| MS.gene053836 | MS.gene69174 | 0.864131 | 1.52E-64 | -1.69E-46 |
| MS.gene053928 | MS.gene69174 | 0.817531 | 3.14E-52 | -1.69E-46 |
| MS.gene054011 | MS.gene69174 | 0.814371 | 1.59E-51 | -1.69E-46 |
| MS.gene054012 | MS.gene69174 | 0.803754 | 3.00E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene69174 | 0.828696 | 7.79E-55 | -1.69E-46 |
| MS.gene054214 | MS.gene69174 | 0.810498 | 1.12E-50 | -1.69E-46 |
| MS.gene054376 | MS.gene69174 | 0.848928 | 4.48E-60 | -1.69E-46 |
| MS.gene054473 | MS.gene69174 | 0.823328 | 1.47E-53 | -1.69E-46 |
| MS.gene05455 | MS.gene69174 | 0.805368 | 1.38E-49 | -1.69E-46 |
| MS.gene054802 | MS.gene69174 | 0.803646 | 3.16E-49 | -1.69E-46 |
| MS.gene054803 | MS.gene69174 | 0.805253 | 1.46E-49 | -1.69E-46 |
| MS.gene054804 | MS.gene69174 | 0.80768 | 4.49E-50 | -1.69E-46 |
| MS.gene054983 | MS.gene69174 | 0.802411 | 5.68E-49 | -1.69E-46 |
| MS.gene055116 | MS.gene69174 | 0.861418 | 1.04E-63 | -1.69E-46 |
| MS.gene055254 | MS.gene69174 | 0.834995 | 2.17E-56 | -1.69E-46 |
| MS.gene055277 | MS.gene69174 | 0.892723 | 1.22E-74 | -1.69E-46 |
| MS.gene055390 | MS.gene69174 | 0.840132 | 1.05E-57 | -1.69E-46 |
| MS.gene055422 | MS.gene69174 | 0.865648 | 5.07E-65 | -1.69E-46 |
| MS.gene055428 | MS.gene69174 | 0.881092 | 3.20E-70 | -1.69E-46 |
| MS.gene055499 | MS.gene69174 | 0.802213 | 6.24E-49 | -1.69E-46 |
| MS.gene05553 | MS.gene69174 | 0.816914 | 4.33E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene69174 | 0.821311 | 4.32E-53 | -1.69E-46 |
| MS.gene055712 | MS.gene69174 | 0.849255 | 3.64E-60 | -1.69E-46 |
| MS.gene056191 | MS.gene69174 | 0.869531 | 2.89E-66 | -1.69E-46 |
| MS.gene056407 | MS.gene69174 | 0.811378 | 7.22E-51 | -1.69E-46 |
| MS.gene056410 | MS.gene69174 | 0.823886 | 1.09E-53 | -1.69E-46 |
| MS.gene056609 | MS.gene69174 | 0.855837 | 4.83E-62 | -1.69E-46 |
| MS.gene056612 | MS.gene69174 | 0.848247 | 6.92E-60 | -1.69E-46 |
| MS.gene056772 | MS.gene69174 | 0.807953 | 3.93E-50 | -1.69E-46 |
| MS.gene056796 | MS.gene69174 | 0.809263 | 2.06E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene69174 | 0.887444 | 1.42E-72 | -1.69E-46 |
| MS.gene057121 | MS.gene69174 | 0.801762 | 7.73E-49 | -1.69E-46 |
| MS.gene057123 | MS.gene69174 | 0.800774 | 1.23E-48 | -1.69E-46 |
| MS.gene057124 | MS.gene69174 | 0.828536 | 8.51E-55 | -1.69E-46 |
| MS.gene057129 | MS.gene69174 | 0.820958 | 5.21E-53 | -1.69E-46 |
| MS.gene057295 | MS.gene69174 | 0.886 | 5.00E-72 | -1.69E-46 |
| MS.gene05733 | MS.gene69174 | 0.871939 | 4.66E-67 | -1.69E-46 |
| MS.gene057439 | MS.gene69174 | 0.82892 | 6.87E-55 | -1.69E-46 |
| MS.gene057448 | MS.gene69174 | 0.831527 | 1.59E-55 | -1.69E-46 |
| MS.gene057449 | MS.gene69174 | 0.831495 | 1.62E-55 | -1.69E-46 |
| MS.gene057450 | MS.gene69174 | 0.836459 | 9.24E-57 | -1.69E-46 |
| MS.gene057749 | MS.gene69174 | 0.822331 | 2.51E-53 | -1.69E-46 |
| MS.gene057782 | MS.gene69174 | 0.822518 | 2.27E-53 | -1.69E-46 |
| MS.gene057794 | MS.gene69174 | 0.807168 | 5.77E-50 | -1.69E-46 |
| MS.gene057796 | MS.gene69174 | 0.829987 | 3.79E-55 | -1.69E-46 |
| MS.gene057823 | MS.gene69174 | 0.804889 | 1.74E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene69174 | 0.881722 | 1.89E-70 | -1.69E-46 |
| MS.gene058082 | MS.gene69174 | 0.823236 | 1.54E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene69174 | 0.862257 | 5.76E-64 | -1.69E-46 |
| MS.gene058233 | MS.gene69174 | 0.858072 | 1.06E-62 | -1.69E-46 |
| MS.gene058276 | MS.gene69174 | 0.811301 | 7.50E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene69174 | 0.846451 | 2.15E-59 | -1.69E-46 |
| MS.gene058365 | MS.gene69174 | 0.819302 | 1.25E-52 | -1.69E-46 |
| MS.gene058537 | MS.gene69174 | -0.814583 | 1.43E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene69174 | 0.865077 | 7.67E-65 | -1.69E-46 |
| MS.gene058749 | MS.gene69174 | 0.807724 | 4.40E-50 | -1.69E-46 |
| MS.gene058787 | MS.gene69174 | 0.846103 | 2.68E-59 | -1.69E-46 |
| MS.gene058845 | MS.gene69174 | 0.819366 | 1.21E-52 | -1.69E-46 |
| MS.gene058928 | MS.gene69174 | 0.842073 | 3.23E-58 | -1.69E-46 |
| MS.gene05907 | MS.gene69174 | 0.861366 | 1.08E-63 | -1.69E-46 |
| MS.gene059294 | MS.gene69174 | 0.82509 | 5.67E-54 | -1.69E-46 |
| MS.gene059326 | MS.gene69174 | 0.807906 | 4.02E-50 | -1.69E-46 |
| MS.gene059518 | MS.gene69174 | 0.85931 | 4.52E-63 | -1.69E-46 |
| MS.gene059536 | MS.gene69174 | 0.800738 | 1.25E-48 | -1.69E-46 |
| MS.gene059597 | MS.gene69174 | 0.864246 | 1.40E-64 | -1.69E-46 |
| MS.gene059676 | MS.gene69174 | 0.837016 | 6.67E-57 | -1.69E-46 |
| MS.gene059688 | MS.gene69174 | 0.859816 | 3.18E-63 | -1.69E-46 |
| MS.gene059692 | MS.gene69174 | 0.888179 | 7.43E-73 | -1.69E-46 |
| MS.gene059695 | MS.gene69174 | 0.879647 | 1.05E-69 | -1.69E-46 |
| MS.gene059708 | MS.gene69174 | 0.829665 | 4.53E-55 | -1.69E-46 |
| MS.gene05984 | MS.gene69174 | 0.842186 | 3.02E-58 | -1.69E-46 |
| MS.gene059894 | MS.gene69174 | 0.901132 | 3.65E-78 | -1.69E-46 |
| MS.gene059899 | MS.gene69174 | 0.800298 | 1.54E-48 | -1.69E-46 |
| MS.gene059974 | MS.gene69174 | 0.828651 | 7.99E-55 | -1.69E-46 |
| MS.gene060005 | MS.gene69174 | 0.823394 | 1.42E-53 | -1.69E-46 |
| MS.gene06037 | MS.gene69174 | 0.884725 | 1.50E-71 | -1.69E-46 |
| MS.gene060403 | MS.gene69174 | 0.829244 | 5.74E-55 | -1.69E-46 |
| MS.gene060407 | MS.gene69174 | 0.81542 | 9.33E-52 | -1.69E-46 |
| MS.gene060476 | MS.gene69174 | 0.829451 | 5.11E-55 | -1.69E-46 |
| MS.gene060804 | MS.gene69174 | 0.806889 | 6.61E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene69174 | 0.913232 | 7.81E-84 | -1.69E-46 |
| MS.gene061051 | MS.gene69174 | -0.842501 | 2.49E-58 | -1.69E-46 |
| MS.gene061112 | MS.gene69174 | 0.813105 | 3.03E-51 | -1.69E-46 |
| MS.gene061265 | MS.gene69174 | 0.806175 | 9.34E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69174.t1 | MTR_4g037505 | 97.222 | 108 | 2 | 1 | 1 | 107 | 1 | 108 | 5.56e-71 | 207 |
| MS.gene69174.t1 | MTR_3g030850 | 69.159 | 107 | 30 | 3 | 1 | 106 | 1 | 105 | 2.39e-41 | 132 |
| MS.gene69174.t1 | MTR_3g030860 | 68.519 | 108 | 30 | 4 | 1 | 107 | 1 | 105 | 3.22e-33 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69174.t1 | AT1G51400 | 49.541 | 109 | 48 | 3 | 1 | 106 | 1 | 105 | 1.46e-23 | 87.4 |
| MS.gene69174.t1 | AT3G21055 | 50.909 | 110 | 44 | 4 | 1 | 107 | 1 | 103 | 1.31e-22 | 84.7 |
| MS.gene69174.t1 | AT3G21055 | 50.909 | 110 | 44 | 4 | 1 | 107 | 41 | 143 | 2.43e-22 | 85.1 |
Find 34 sgRNAs with CRISPR-Local
Find 34 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGTTGCTGGAATGGCTT+TGG | 0.303558 | 4.2:+65970423 | MS.gene69174:CDS |
| GCAGCTGTTTGTTCTGTTGC+TGG | 0.330654 | 4.2:+65970412 | MS.gene69174:CDS |
| GCTTCAGGTGAACCACGTTT+TGG | 0.335997 | 4.2:-65970454 | None:intergenic |
| TTCAACTGCTTTGCCAGCAT+TGG | 0.361259 | 4.2:-65970308 | None:intergenic |
| GCATAGGCTTTCTTAGCTTC+AGG | 0.364633 | 4.2:-65970469 | None:intergenic |
| TGTTTGTTCTGTTGCTGGAA+TGG | 0.390336 | 4.2:+65970417 | MS.gene69174:CDS |
| GGTGGCAACTCAGAGGAAAC+TGG | 0.431564 | 4.2:+65970279 | MS.gene69174:CDS |
| GTTGGCATGGTGACACAAAC+AGG | 0.454036 | 4.2:-65970493 | None:intergenic |
| GAAGCTCAGCCATCGCGAAC+CGG | 0.486000 | 4.2:+65970251 | MS.gene69174:CDS |
| AGCCATCGCGAACCGGTCTC+CGG | 0.486104 | 4.2:+65970258 | MS.gene69174:CDS |
| TCTGAGTTGCCACCGGAGAC+CGG | 0.487218 | 4.2:-65970270 | None:intergenic |
| ACCATGACAGCAGCATTCTT+CGG | 0.487676 | 4.2:+65970226 | MS.gene69174:CDS |
| AAACTGGTGGTGGCCAATGC+TGG | 0.497236 | 4.2:+65970295 | MS.gene69174:CDS |
| CATGATGTTCCTCCTTCCAT+TGG | 0.502517 | 4.2:-65970374 | None:intergenic |
| GGTGAGTTATGACAATGAAA+AGG | 0.503070 | 4.2:+65970345 | MS.gene69174:CDS |
| TAGCGACAAATTCTAGCTGT+TGG | 0.507947 | 4.2:-65970511 | None:intergenic |
| AATGCTGGCAAAGCAGTTGA+AGG | 0.545817 | 4.2:+65970310 | MS.gene69174:CDS |
| CACCGGAGACCGGTTCGCGA+TGG | 0.568043 | 4.2:-65970260 | None:intergenic |
| GCCGAAGAATGCTGCTGTCA+TGG | 0.580952 | 4.2:-65970227 | None:intergenic |
| AGTTTCCTCTGAGTTGCCAC+CGG | 0.580967 | 4.2:-65970277 | None:intergenic |
| AACTCAGAGGAAACTGGTGG+TGG | 0.588596 | 4.2:+65970285 | MS.gene69174:CDS |
| GGTGACACAAACAGGAGCAT+AGG | 0.599674 | 4.2:-65970485 | None:intergenic |
| AATGAAAAGGAAGAGACCAA+TGG | 0.609364 | 4.2:+65970358 | MS.gene69174:CDS |
| AGTTGAAGGAGGGAAAATGA+AGG | 0.612928 | 4.2:+65970324 | MS.gene69174:CDS |
| CATCGCGAACCGGTCTCCGG+TGG | 0.615926 | 4.2:+65970261 | MS.gene69174:CDS |
| ACAAATTCTAGCTGTTGGCA+TGG | 0.617400 | 4.2:-65970506 | None:intergenic |
| GCTGGCAAAGCAGTTGAAGG+AGG | 0.624856 | 4.2:+65970313 | MS.gene69174:CDS |
| CTGGCAAAGCAGTTGAAGGA+GGG | 0.628956 | 4.2:+65970314 | MS.gene69174:CDS |
| AGGAAGAGACCAATGGAAGG+AGG | 0.639763 | 4.2:+65970365 | MS.gene69174:CDS |
| AAAAGGAAGAGACCAATGGA+AGG | 0.647549 | 4.2:+65970362 | MS.gene69174:CDS |
| TTGGCTGATGAGCCAAAACG+TGG | 0.652108 | 4.2:+65970442 | MS.gene69174:CDS |
| GGTCTCCGGTGGCAACTCAG+AGG | 0.684571 | 4.2:+65970272 | MS.gene69174:CDS |
| ATGACAGCAGCATTCTTCGG+CGG | 0.688662 | 4.2:+65970229 | MS.gene69174:CDS |
| GGCAACTCAGAGGAAACTGG+TGG | 0.709130 | 4.2:+65970282 | MS.gene69174:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AATGAAAAGGAAGAGACCAA+TGG | + | chr4.2:65970358-65970377 | MS.gene69174:CDS | 35.0% | |
| GGTGAGTTATGACAATGAAA+AGG | + | chr4.2:65970345-65970364 | MS.gene69174:CDS | 35.0% | |
| AAAAGGAAGAGACCAATGGA+AGG | + | chr4.2:65970362-65970381 | MS.gene69174:CDS | 40.0% | |
| AGTTGAAGGAGGGAAAATGA+AGG | + | chr4.2:65970324-65970343 | MS.gene69174:CDS | 40.0% | |
| TGTTTGTTCTGTTGCTGGAA+TGG | + | chr4.2:65970417-65970436 | MS.gene69174:CDS | 40.0% | |
| ! | ACAAATTCTAGCTGTTGGCA+TGG | - | chr4.2:65970509-65970528 | None:intergenic | 40.0% |
| ! | TAGCGACAAATTCTAGCTGT+TGG | - | chr4.2:65970514-65970533 | None:intergenic | 40.0% |
| AATGCTGGCAAAGCAGTTGA+AGG | + | chr4.2:65970310-65970329 | MS.gene69174:CDS | 45.0% | |
| ACCATGACAGCAGCATTCTT+CGG | + | chr4.2:65970226-65970245 | MS.gene69174:CDS | 45.0% | |
| CATGATGTTCCTCCTTCCAT+TGG | - | chr4.2:65970377-65970396 | None:intergenic | 45.0% | |
| GCATAGGCTTTCTTAGCTTC+AGG | - | chr4.2:65970472-65970491 | None:intergenic | 45.0% | |
| TTCAACTGCTTTGCCAGCAT+TGG | - | chr4.2:65970311-65970330 | None:intergenic | 45.0% | |
| TTCTGTTGCTGGAATGGCTT+TGG | + | chr4.2:65970423-65970442 | MS.gene69174:CDS | 45.0% | |
| AACTCAGAGGAAACTGGTGG+TGG | + | chr4.2:65970285-65970304 | MS.gene69174:CDS | 50.0% | |
| AGGAAGAGACCAATGGAAGG+AGG | + | chr4.2:65970365-65970384 | MS.gene69174:CDS | 50.0% | |
| AGTTTCCTCTGAGTTGCCAC+CGG | - | chr4.2:65970280-65970299 | None:intergenic | 50.0% | |
| ATGACAGCAGCATTCTTCGG+CGG | + | chr4.2:65970229-65970248 | MS.gene69174:CDS | 50.0% | |
| CTGGCAAAGCAGTTGAAGGA+GGG | + | chr4.2:65970314-65970333 | MS.gene69174:CDS | 50.0% | |
| GCAGCTGTTTGTTCTGTTGC+TGG | + | chr4.2:65970412-65970431 | MS.gene69174:CDS | 50.0% | |
| GTTGGCATGGTGACACAAAC+AGG | - | chr4.2:65970496-65970515 | None:intergenic | 50.0% | |
| TTGGCTGATGAGCCAAAACG+TGG | + | chr4.2:65970442-65970461 | MS.gene69174:CDS | 50.0% | |
| ! | GCTTCAGGTGAACCACGTTT+TGG | - | chr4.2:65970457-65970476 | None:intergenic | 50.0% |
| ! | GGTGACACAAACAGGAGCAT+AGG | - | chr4.2:65970488-65970507 | None:intergenic | 50.0% |
| GCCGAAGAATGCTGCTGTCA+TGG | - | chr4.2:65970230-65970249 | None:intergenic | 55.0% | |
| GCTGGCAAAGCAGTTGAAGG+AGG | + | chr4.2:65970313-65970332 | MS.gene69174:CDS | 55.0% | |
| GGCAACTCAGAGGAAACTGG+TGG | + | chr4.2:65970282-65970301 | MS.gene69174:CDS | 55.0% | |
| GGTGGCAACTCAGAGGAAAC+TGG | + | chr4.2:65970279-65970298 | MS.gene69174:CDS | 55.0% | |
| !! | AAACTGGTGGTGGCCAATGC+TGG | + | chr4.2:65970295-65970314 | MS.gene69174:CDS | 55.0% |
| GAAGCTCAGCCATCGCGAAC+CGG | + | chr4.2:65970251-65970270 | MS.gene69174:CDS | 60.0% | |
| TCTGAGTTGCCACCGGAGAC+CGG | - | chr4.2:65970273-65970292 | None:intergenic | 60.0% | |
| AGCCATCGCGAACCGGTCTC+CGG | + | chr4.2:65970258-65970277 | MS.gene69174:CDS | 65.0% | |
| GGTCTCCGGTGGCAACTCAG+AGG | + | chr4.2:65970272-65970291 | MS.gene69174:CDS | 65.0% | |
| CATCGCGAACCGGTCTCCGG+TGG | + | chr4.2:65970261-65970280 | MS.gene69174:CDS | 70.0% | |
| !! | CACCGGAGACCGGTTCGCGA+TGG | - | chr4.2:65970263-65970282 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 65970214 | 65970537 | 65970214 | ID=MS.gene69174 |
| chr4.2 | mRNA | 65970214 | 65970537 | 65970214 | ID=MS.gene69174.t1;Parent=MS.gene69174 |
| chr4.2 | exon | 65970214 | 65970537 | 65970214 | ID=MS.gene69174.t1.exon1;Parent=MS.gene69174.t1 |
| chr4.2 | CDS | 65970214 | 65970537 | 65970214 | ID=cds.MS.gene69174.t1;Parent=MS.gene69174.t1 |
| Gene Sequence |
| Protein sequence |
