AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065138


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065138.t1 MTR_1g110750 94.419 215 12 0 2 216 43 257 8.68e-145 404
MS.gene065138.t1 MTR_4g118060 32.639 144 88 5 37 177 74 211 1.47e-11 62.8
MS.gene065138.t1 MTR_1g085490 32.639 144 88 5 37 177 74 211 1.53e-11 62.8
MS.gene065138.t1 MTR_1g031890 32.639 144 88 5 37 177 74 211 1.55e-11 62.4
MS.gene065138.t1 MTR_1g031890 32.639 144 88 5 37 177 74 211 1.69e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065138.t1 AT3G25920 77.612 201 43 1 2 202 60 258 1.47e-108 313

Find 57 sgRNAs with CRISPR-Local

Find 390 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGGTTTCGGTTGGACAATT+TGG 0.209684 1.2:+81989314 MS.gene065138:CDS
CAAGGAGCGAGTTGTGGTTT+TGG 0.247810 1.2:+81989396 MS.gene065138:CDS
TCCTGCAATTCCTCTAAGTT+TGG 0.258498 1.2:-81989502 None:intergenic
CGGTTTCGGTTGGACAATTT+GGG 0.284648 1.2:+81989315 MS.gene065138:CDS
AGCAGCTGCTTCTCGCTTCT+TGG 0.291577 1.2:-81994129 None:intergenic
TTGCATATTTAAACAGAATC+TGG 0.313222 1.2:-81994158 None:intergenic
CGACGATTGCCCAAACTTAG+AGG 0.316218 1.2:+81989492 MS.gene065138:CDS
AGATTGATGTGGACATATTT+CGG 0.336463 1.2:-81990530 None:intergenic
CTCTTTCTTGAACCTGGTTG+TGG 0.358662 1.2:-81989339 None:intergenic
TGTTCCATCACTGTGATTCC+TGG 0.369456 1.2:+81994044 MS.gene065138:CDS
CCCAAACTTAGAGGAATTGC+AGG 0.376415 1.2:+81989501 MS.gene065138:CDS
TGATTCCTGGCCGTAAGAAA+TGG 0.380224 1.2:+81994057 MS.gene065138:CDS
CCTGCAATTCCTCTAAGTTT+GGG 0.397805 1.2:-81989501 None:intergenic
CTCCTTCGCTGATGTGGAAA+AGG 0.406202 1.2:-81994003 None:intergenic
TTTGCTCTCTTTCTTGAACC+TGG 0.419614 1.2:-81989345 None:intergenic
TAATAAGGCTGCTTCTGCTT+CGG 0.436199 1.2:+81989269 MS.gene065138:CDS
AAGAAAGAGAGCAAAGAGAA+AGG 0.443452 1.2:+81989353 MS.gene065138:CDS
ATGGCTTAACCCATTTCTTA+CGG 0.452810 1.2:-81994067 None:intergenic
AACCAGCAGGTGAAAATGTT+CGG 0.456863 1.2:+81989295 MS.gene065138:CDS
AGAAGGGGAAGAGGTGTCTC+TGG 0.461261 1.2:+81990580 MS.gene065138:CDS
CAGGTGAAAATGTTCGGTTT+CGG 0.473561 1.2:+81989301 MS.gene065138:CDS
GACAATTTGGGTCCACAACC+AGG 0.479320 1.2:+81989327 MS.gene065138:CDS
AGAAAGAGAGCAAAGAGAAA+GGG 0.484644 1.2:+81989354 MS.gene065138:CDS
TGAAAATGTTCGGTTTCGGT+TGG 0.487169 1.2:+81989305 MS.gene065138:CDS
AAGTTTCTCCTTCGCTGATG+TGG 0.489671 1.2:-81994009 None:intergenic
TTAACCCATTTCTTACGGCC+AGG 0.492636 1.2:-81994062 None:intergenic
GAAATATGTCCACATCAATC+TGG 0.495258 1.2:+81990532 MS.gene065138:CDS
GGAACGGAAACTTCTATTGA+AGG 0.496485 1.2:+81990643 MS.gene065138:CDS
AGTTTCCGTTCCCTTCCTGA+TGG 0.497026 1.2:-81990632 None:intergenic
ACATAATAAGGTATGCATGC+TGG 0.501018 1.2:+81990503 MS.gene065138:intron
TCTGCTTCGGTGAAACCAGC+AGG 0.507750 1.2:+81989282 MS.gene065138:CDS
AGAGCAAAGAGAAAGGGAAG+AGG 0.509714 1.2:+81989360 MS.gene065138:CDS
GATTCCTGGCCGTAAGAAAT+GGG 0.511756 1.2:+81994058 MS.gene065138:CDS
GAAGATGCTGGATTTCAAGA+AGG 0.525528 1.2:+81990563 MS.gene065138:CDS
AAGGAGAAACTTGAGTCTGC+TGG 0.526406 1.2:+81994020 MS.gene065138:CDS
CTGGTAGACATAGAAGATGC+TGG 0.527862 1.2:+81990551 MS.gene065138:CDS
AAACGTGTGATTAACCCATC+AGG 0.531753 1.2:+81990617 MS.gene065138:CDS
AAGATGCTGGATTTCAAGAA+GGG 0.537870 1.2:+81990564 MS.gene065138:CDS
GTTTCCGTTCCCTTCCTGAT+GGG 0.539207 1.2:-81990631 None:intergenic
AGAGGTATTGCCGCAGGACA+AGG 0.557884 1.2:+81989378 MS.gene065138:CDS
TTGGGCAATCGTCGATAAAG+TGG 0.564517 1.2:-81989483 None:intergenic
AAGAAGTTGACAATAAAAGC+TGG 0.573815 1.2:+81993978 MS.gene065138:CDS
GCAGGACAAGGAGCGAGTTG+TGG 0.577933 1.2:+81989390 MS.gene065138:CDS
TGGATTTCAAGAAGGGGAAG+AGG 0.578835 1.2:+81990571 MS.gene065138:CDS
AAGGGAAGAGGTATTGCCGC+AGG 0.588347 1.2:+81989372 MS.gene065138:CDS
GGTGTCTCTGGAGACACTGA+CGG 0.598433 1.2:+81990592 MS.gene065138:CDS
GTGTGATTAACCCATCAGGA+AGG 0.611754 1.2:+81990621 MS.gene065138:CDS
CTTCTTGGCGAAGTATTCGT+CGG 0.627986 1.2:-81994114 None:intergenic
ACGGCCAGGAATCACAGTGA+TGG 0.630385 1.2:-81994048 None:intergenic
TGTGATTAACCCATCAGGAA+GGG 0.634878 1.2:+81990622 MS.gene065138:CDS
TCTGGACCTGGTATCATGAG+AGG 0.634957 1.2:+81989441 MS.gene065138:CDS
TCAAAACCTCTCATGATACC+AGG 0.646172 1.2:-81989447 None:intergenic
CTATGTCTACCAGATTGATG+TGG 0.650882 1.2:-81990541 None:intergenic
TTAACCCATCAGGAAGGGAA+CGG 0.658603 1.2:+81990627 MS.gene065138:CDS
AGATGCTGGATTTCAAGAAG+GGG 0.662527 1.2:+81990565 MS.gene065138:CDS
ACAACTCGCTCCTTGTCCTG+CGG 0.686055 1.2:-81989388 None:intergenic
AAACTTAGAGGAATTGCAGG+AGG 0.696930 1.2:+81989504 MS.gene065138:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATTAAATGTACATTTA+GGG - chr1.2:81991395-81991414 None:intergenic 10.0%
!!! TACACAATATATTTTTAAAA+AGG + chr1.2:81993893-81993912 MS.gene065138:intron 10.0%
!!! TTTTAATTAAATGTACATTT+AGG - chr1.2:81991396-81991415 None:intergenic 10.0%
!! AATTTCAACAATAAAACAAT+AGG - chr1.2:81989561-81989580 None:intergenic 15.0%
!! GAATTATATTAGGATAATTT+AGG + chr1.2:81989946-81989965 MS.gene065138:intron 15.0%
!!! AAAAGCAATTATTTTATGAA+AGG + chr1.2:81990371-81990390 MS.gene065138:intron 15.0%
!!! GATTATTTTAGATTAACTAT+AGG - chr1.2:81991188-81991207 None:intergenic 15.0%
!!! TATTAATCTTTTTCACTTTA+AGG + chr1.2:81992797-81992816 MS.gene065138:intron 15.0%
!!! TCTAATATCATTTAGAATTT+TGG + chr1.2:81993262-81993281 MS.gene065138:intron 15.0%
!! AAAGAGTTAAAGTTAGTTAA+TGG + chr1.2:81991045-81991064 MS.gene065138:intron 20.0%
!! AAATATCAATTTCTGTCTAT+TGG + chr1.2:81991413-81991432 MS.gene065138:intron 20.0%
!! AACAAAACATCGTAAAAAAA+GGG - chr1.2:81989874-81989893 None:intergenic 20.0%
!! ACCAGATAGAATATTTAAAA+GGG + chr1.2:81991834-81991853 MS.gene065138:intron 20.0%
!! GAGAATTCAAGAATATAAAA+TGG + chr1.2:81991981-81992000 MS.gene065138:intron 20.0%
!! TAACAAAACATCGTAAAAAA+AGG - chr1.2:81989875-81989894 None:intergenic 20.0%
!! TACCAGATAGAATATTTAAA+AGG + chr1.2:81991833-81991852 MS.gene065138:intron 20.0%
!! TTTCATATTATGCCTTTAAT+CGG + chr1.2:81990887-81990906 MS.gene065138:intron 20.0%
!!! ATTTCTAAAGTGATATTTAG+CGG + chr1.2:81993534-81993553 MS.gene065138:intron 20.0%
!!! CTTTGAAAATCTACATATTA+GGG - chr1.2:81990160-81990179 None:intergenic 20.0%
!!! GAAAATAATGTTTTCAACTA+TGG + chr1.2:81989598-81989617 MS.gene065138:intron 20.0%
!!! GGATTTTGTTGAATTATATT+AGG + chr1.2:81989936-81989955 MS.gene065138:intron 20.0%
!!! TATTTTCAACAAGAGAAATA+AGG + chr1.2:81991224-81991243 MS.gene065138:intron 20.0%
!!! TCTTTGAAAATCTACATATT+AGG - chr1.2:81990161-81990180 None:intergenic 20.0%
!!! TTCACTTTTAAAAACAAATG+AGG + chr1.2:81990773-81990792 MS.gene065138:intron 20.0%
! AAAAGGAAAAGATGTCTTTA+TGG + chr1.2:81992161-81992180 MS.gene065138:intron 25.0%
! AAAGGAAAAGATGTCTTTAT+GGG + chr1.2:81992162-81992181 MS.gene065138:intron 25.0%
! AATAAAAAAGATTACCGAAC+AGG + chr1.2:81992086-81992105 MS.gene065138:intron 25.0%
! AGAAGTCTTTCTTGATATAT+GGG - chr1.2:81990819-81990838 None:intergenic 25.0%
! ATAAAAAAGATTACCGAACA+GGG + chr1.2:81992087-81992106 MS.gene065138:intron 25.0%
! CAATTTCAAACAACTTATAC+AGG + chr1.2:81993776-81993795 MS.gene065138:intron 25.0%
! CATTTCAAGATGTCAATAAA+GGG - chr1.2:81990198-81990217 None:intergenic 25.0%
! CTCTTGTTGAAAATATGTTT+AGG - chr1.2:81991219-81991238 None:intergenic 25.0%
! GTATATCATTGAAGATTATG+TGG + chr1.2:81991463-81991482 MS.gene065138:intron 25.0%
! GTTGTCTATAAATAAGAAGA+GGG + chr1.2:81991250-81991269 MS.gene065138:intron 25.0%
! TAGTCTATATACTACCAAAT+GGG + chr1.2:81989737-81989756 MS.gene065138:intron 25.0%
! TCATTAGTAGGAAAAAACAA+TGG + chr1.2:81990013-81990032 MS.gene065138:intron 25.0%
! TGATGTGTCATAATGTTATT+AGG + chr1.2:81991693-81991712 MS.gene065138:intron 25.0%
! TGTAAAAGTTGGAATATAAG+AGG + chr1.2:81991011-81991030 MS.gene065138:intron 25.0%
! TGTCAGATTCTAAACATATT+TGG - chr1.2:81992393-81992412 None:intergenic 25.0%
! TGTTGTCTATAAATAAGAAG+AGG + chr1.2:81991249-81991268 MS.gene065138:intron 25.0%
! TTAGTCTATATACTACCAAA+TGG + chr1.2:81989736-81989755 MS.gene065138:intron 25.0%
! TTATTAACAACAAAAACACG+AGG - chr1.2:81989255-81989274 None:intergenic 25.0%
! TTGACATTGTAATTCAATGA+TGG + chr1.2:81989634-81989653 MS.gene065138:intron 25.0%
! TTTCATATGAAATAGGTGTT+GGG + chr1.2:81991588-81991607 MS.gene065138:intron 25.0%
!! AAAGTTAGTTAATGGATGTT+GGG + chr1.2:81991053-81991072 MS.gene065138:intron 25.0%
!! AATAATGTTTTCAACTATGG+TGG + chr1.2:81989601-81989620 MS.gene065138:intron 25.0%
!! AATATTTTCCTGAGTTTATG+AGG - chr1.2:81993739-81993758 None:intergenic 25.0%
!! ACCCTTTTAAATATTCTATC+TGG - chr1.2:81991838-81991857 None:intergenic 25.0%
!! GAATTTGAAACTGTAAAAGT+TGG + chr1.2:81991000-81991019 MS.gene065138:intron 25.0%
!! TAAAGTTAGTTAATGGATGT+TGG + chr1.2:81991052-81991071 MS.gene065138:intron 25.0%
!! TAAGTTCAAACGCAATATTT+TGG + chr1.2:81990959-81990978 MS.gene065138:intron 25.0%
!! TTAAAAGGGTTTTTCTTGAA+AGG + chr1.2:81991848-81991867 MS.gene065138:intron 25.0%
!! TTCGTAGATATGAAAAGTAT+TGG - chr1.2:81993502-81993521 None:intergenic 25.0%
!! TTTTCATATGAAATAGGTGT+TGG + chr1.2:81991587-81991606 MS.gene065138:intron 25.0%
!!! AATTCTATTTCTAAGTTGGT+TGG - chr1.2:81993016-81993035 None:intergenic 25.0%
!!! CTTGTATTTTTAATAGAGCT+GGG + chr1.2:81992962-81992981 MS.gene065138:intron 25.0%
!!! CTTTTAAAAACAAATGAGGA+TGG + chr1.2:81990777-81990796 MS.gene065138:intron 25.0%
!!! GAGGTATTTTCATATGAAAT+AGG + chr1.2:81991581-81991600 MS.gene065138:intron 25.0%
!!! TCGTGTTTTTGTTGTTAATA+AGG + chr1.2:81989254-81989273 MS.gene065138:CDS 25.0%
!!! TCTTGTATTTTTAATAGAGC+TGG + chr1.2:81992961-81992980 MS.gene065138:intron 25.0%
!!! TCTTGTCATTTTAGTATAGT+CGG + chr1.2:81991296-81991315 MS.gene065138:intron 25.0%
!!! TCTTTTTCACTTTAAGGATA+AGG + chr1.2:81992803-81992822 MS.gene065138:intron 25.0%
!!! TTGCTTTTGAAATGAAATCA+TGG - chr1.2:81990359-81990378 None:intergenic 25.0%
!!! TTTTGAAATGAAATCATGGA+AGG - chr1.2:81990355-81990374 None:intergenic 25.0%
AAATGAGTGAAGAAAAGAGT+CGG + chr1.2:81991936-81991955 MS.gene065138:intron 30.0%
AAATGGAGAAGTAAGAAGAA+AGG + chr1.2:81991998-81992017 MS.gene065138:intron 30.0%
AACATGTAAGACAACAACTA+AGG - chr1.2:81990709-81990728 None:intergenic 30.0%
AACCAAAATTCTCCGATTAA+AGG - chr1.2:81990902-81990921 None:intergenic 30.0%
AACTACTACATCAAGCTAAA+AGG + chr1.2:81992716-81992735 MS.gene065138:intron 30.0%
AACTTTATTCACGATAGACA+AGG - chr1.2:81990853-81990872 None:intergenic 30.0%
AAGAAGAAAGGTGAAAGAAA+TGG + chr1.2:81992010-81992029 MS.gene065138:intron 30.0%
AAGAAGTTGACAATAAAAGC+TGG + chr1.2:81993978-81993997 MS.gene065138:CDS 30.0%
AAGACTTCCTTTATAAGAAG+AGG + chr1.2:81992577-81992596 MS.gene065138:intron 30.0%
AATGAAATCATGGAAGGATA+TGG - chr1.2:81990349-81990368 None:intergenic 30.0%
ACATGTAAGACAACAACTAA+GGG - chr1.2:81990708-81990727 None:intergenic 30.0%
ACTACTACATCAAGCTAAAA+GGG + chr1.2:81992717-81992736 MS.gene065138:intron 30.0%
ACTTCTAATTAGTCATGCAT+TGG + chr1.2:81993820-81993839 MS.gene065138:intron 30.0%
ACTTTAACTCTTTCAACCAA+CGG - chr1.2:81991038-81991057 None:intergenic 30.0%
ACTTTATTCACGATAGACAA+GGG - chr1.2:81990852-81990871 None:intergenic 30.0%
AGAAGAGCTCTTTCAAATAA+TGG - chr1.2:81993711-81993730 None:intergenic 30.0%
AGATTGATGTGGACATATTT+CGG - chr1.2:81990533-81990552 None:intergenic 30.0%
AGGAAGAGAAATTTAGGTAT+TGG - chr1.2:81990270-81990289 None:intergenic 30.0%
ATACCCAACAAAATACCAAA+TGG - chr1.2:81991746-81991765 None:intergenic 30.0%
ATGACTTTCAAATGTGATGT+AGG - chr1.2:81990094-81990113 None:intergenic 30.0%
ATTATTTGAAAGAGCTCTTC+TGG + chr1.2:81993710-81993729 MS.gene065138:intron 30.0%
ATTTCTGTCTATTGGTATCA+AGG + chr1.2:81991421-81991440 MS.gene065138:intron 30.0%
CAAACATGCATAAACTTCTA+GGG + chr1.2:81993165-81993184 MS.gene065138:intron 30.0%
CAGAAGTCTTTCTTGATATA+TGG - chr1.2:81990820-81990839 None:intergenic 30.0%
CAGAGTTTCACAATTTGTAA+TGG - chr1.2:81992285-81992304 None:intergenic 30.0%
CCATTTCAAGATGTCAATAA+AGG - chr1.2:81990199-81990218 None:intergenic 30.0%
CCTTTATTGACATCTTGAAA+TGG + chr1.2:81990196-81990215 MS.gene065138:intron 30.0%
CTTCTAATTAGTCATGCATT+GGG + chr1.2:81993821-81993840 MS.gene065138:intron 30.0%
GAAGTCTTTCTTGATATATG+GGG - chr1.2:81990818-81990837 None:intergenic 30.0%
GATATATACAACAGCATATC+CGG - chr1.2:81990138-81990157 None:intergenic 30.0%
GTATCTACCTCTTCTTATAA+AGG - chr1.2:81992587-81992606 None:intergenic 30.0%
TAAAAAAGATTACCGAACAG+GGG + chr1.2:81992088-81992107 MS.gene065138:intron 30.0%
TACCCAACAAAATACCAAAT+GGG - chr1.2:81991745-81991764 None:intergenic 30.0%
TATAAATAAGAAGAGGGCTT+AGG + chr1.2:81991256-81991275 MS.gene065138:intron 30.0%
TATATATAAGAAGAGGCTGA+AGG + chr1.2:81992931-81992950 MS.gene065138:intron 30.0%
TGCTCTACATGAATAATACT+TGG - chr1.2:81992619-81992638 None:intergenic 30.0%
TGCTGTCTATATATAAGAAG+AGG + chr1.2:81992924-81992943 MS.gene065138:intron 30.0%
TGTTGGATTGTATTTCAAAG+AGG + chr1.2:81992509-81992528 MS.gene065138:intron 30.0%
TTAGGGAAAATTTCCTTGTA+TGG - chr1.2:81991378-81991397 None:intergenic 30.0%
TTATTGTCTGAAGAGAATCA+TGG + chr1.2:81990222-81990241 MS.gene065138:intron 30.0%
TTTCTTTCATTCTTTGTCGT+AGG + chr1.2:81990396-81990415 MS.gene065138:intron 30.0%
TTTCTTTGAGCCTTACAAAA+CGG - chr1.2:81991124-81991143 None:intergenic 30.0%
! AACCCATTTGGTATTTTGTT+GGG + chr1.2:81991740-81991759 MS.gene065138:intron 30.0%
! AATAAGAATAAAGGCACACA+TGG + chr1.2:81991490-81991509 MS.gene065138:intron 30.0%
! AATATAATTTGCCCGCTAAT+AGG + chr1.2:81989845-81989864 MS.gene065138:intron 30.0%
! AATTTAGGATCCTACTGTTA+GGG + chr1.2:81989961-81989980 MS.gene065138:intron 30.0%
! ATTGTTTTCATGATGTCTAG+AGG + chr1.2:81990739-81990758 MS.gene065138:intron 30.0%
! TAACCCATTTGGTATTTTGT+TGG + chr1.2:81991739-81991758 MS.gene065138:intron 30.0%
! TAATTTAGGATCCTACTGTT+AGG + chr1.2:81989960-81989979 MS.gene065138:intron 30.0%
! TCTAGCATCATGAATTTTGT+TGG + chr1.2:81993600-81993619 MS.gene065138:intron 30.0%
!! AAATTTAGGTATTGGAAGCT+TGG - chr1.2:81990262-81990281 None:intergenic 30.0%
!! AATAATAGTTTGTTGTGCTC+TGG + chr1.2:81993925-81993944 MS.gene065138:intron 30.0%
!! ACACATTACTTGTTGGTTTA+TGG + chr1.2:81990667-81990686 MS.gene065138:intron 30.0%
!! GAGCAATTCTATTTCTAAGT+TGG - chr1.2:81993020-81993039 None:intergenic 30.0%
!! TAAACATGAAGATGGATTGT+TGG + chr1.2:81992492-81992511 MS.gene065138:intron 30.0%
!!! CTTGTCATTTTAGTATAGTC+GGG + chr1.2:81991297-81991316 MS.gene065138:intron 30.0%
!!! TTGTCATTTTAGTATAGTCG+GGG + chr1.2:81991298-81991317 MS.gene065138:intron 30.0%
AAAAAAGGGCAACCTATTAG+CGG - chr1.2:81989860-81989879 None:intergenic 35.0%
AAAGAAACTGTAGCATGTTC+TGG + chr1.2:81993560-81993579 MS.gene065138:intron 35.0%
AAGAAAGAGAGCAAAGAGAA+AGG + chr1.2:81989353-81989372 MS.gene065138:CDS 35.0%
AAGATGCTGGATTTCAAGAA+GGG + chr1.2:81990564-81990583 MS.gene065138:CDS 35.0%
AATCTGACAACTTCAACCTT+TGG + chr1.2:81992404-81992423 MS.gene065138:intron 35.0%
ACATAATAAGGTATGCATGC+TGG + chr1.2:81990503-81990522 MS.gene065138:intron 35.0%
ACATATAATACGCTACCAAG+TGG + chr1.2:81993652-81993671 MS.gene065138:intron 35.0%
ACTATTGGAGGAGATGAATT+TGG + chr1.2:81991903-81991922 MS.gene065138:intron 35.0%
AGAAAGAGAGCAAAGAGAAA+GGG + chr1.2:81989354-81989373 MS.gene065138:CDS 35.0%
ATCAATTTGACATACAGGTC+AGG + chr1.2:81991797-81991816 MS.gene065138:intron 35.0%
ATCTCTTCTTACACAACACT+TGG + chr1.2:81989528-81989547 MS.gene065138:intron 35.0%
ATCTGACAACTTCAACCTTT+GGG + chr1.2:81992405-81992424 MS.gene065138:intron 35.0%
ATGGCTTAACCCATTTCTTA+CGG - chr1.2:81994070-81994089 None:intergenic 35.0%
ATTGATGAGAGGCAGATTAA+TGG + chr1.2:81992552-81992571 MS.gene065138:intron 35.0%
CAAGAAAGACTTCTGATATG+AGG + chr1.2:81990825-81990844 MS.gene065138:intron 35.0%
CAAGGATCAATTTGACATAC+AGG + chr1.2:81991792-81991811 MS.gene065138:intron 35.0%
CATATAATACGCTACCAAGT+GGG + chr1.2:81993653-81993672 MS.gene065138:intron 35.0%
CTAACAGAAGTGGAATGAAA+AGG + chr1.2:81992144-81992163 MS.gene065138:intron 35.0%
CTACATGTAGCATCATTAGT+AGG + chr1.2:81990001-81990020 MS.gene065138:intron 35.0%
GAAATATGTCCACATCAATC+TGG + chr1.2:81990532-81990551 MS.gene065138:CDS 35.0%
GAAATGGAGTGAAATGACTA+TGG + chr1.2:81992026-81992045 MS.gene065138:intron 35.0%
GAACTGAGGAAGAGAAATTT+AGG - chr1.2:81990276-81990295 None:intergenic 35.0%
GAAGGATATGGAAGAATAAG+GGG - chr1.2:81990337-81990356 None:intergenic 35.0%
GCAAACATGCATAAACTTCT+AGG + chr1.2:81993164-81993183 MS.gene065138:intron 35.0%
GCATTCTTTACCTTACAAAC+TGG - chr1.2:81993307-81993326 None:intergenic 35.0%
GGAAAACTACAGAACTTCAA+AGG - chr1.2:81991357-81991376 None:intergenic 35.0%
GGAAGGATATGGAAGAATAA+GGG - chr1.2:81990338-81990357 None:intergenic 35.0%
GTATATGCATAAATCTCGCT+TGG + chr1.2:81990438-81990457 MS.gene065138:intron 35.0%
GTCAAGCATAATAAGAACTG+AGG - chr1.2:81990290-81990309 None:intergenic 35.0%
GTGAAGGAAAATAACATGCT+CGG + chr1.2:81993107-81993126 MS.gene065138:intron 35.0%
GTGAGGAAGTAATTTCAGTT+GGG + chr1.2:81991525-81991544 MS.gene065138:intron 35.0%
TACATAATCAATCTGCAACC+AGG - chr1.2:81990058-81990077 None:intergenic 35.0%
TAGATGAGAATTGTGATTCC+TGG + chr1.2:81990037-81990056 MS.gene065138:intron 35.0%
TAGCATCATAATGCTTCACA+TGG + chr1.2:81989904-81989923 MS.gene065138:intron 35.0%
TCATGAAGTATGCCTATTAC+AGG + chr1.2:81990110-81990129 MS.gene065138:intron 35.0%
TCTCTTCTTACACAACACTT+GGG + chr1.2:81989529-81989548 MS.gene065138:intron 35.0%
TGAAGAGAATCATGGCATTA+TGG + chr1.2:81990230-81990249 MS.gene065138:intron 35.0%
TGAGGAAGTAATTTCAGTTG+GGG + chr1.2:81991526-81991545 MS.gene065138:intron 35.0%
TGAGTTAAGCTTGTAGTTTG+TGG + chr1.2:81992873-81992892 MS.gene065138:intron 35.0%
TGCTTCACATGGAGTTTAAA+TGG + chr1.2:81989915-81989934 MS.gene065138:intron 35.0%
TGGAAGGATATGGAAGAATA+AGG - chr1.2:81990339-81990358 None:intergenic 35.0%
TGTCACATCATTGTTGAATG+CGG + chr1.2:81992220-81992239 MS.gene065138:intron 35.0%
TGTGGCGTGAATAAGAATAA+AGG + chr1.2:81991481-81991500 MS.gene065138:intron 35.0%
TTCATGTTTAGCAACAGCAT+AGG - chr1.2:81992482-81992501 None:intergenic 35.0%
TTGATACACCTGTTAGTTGA+AGG + chr1.2:81992846-81992865 MS.gene065138:intron 35.0%
! AAAAGTGTGCTCTTGTACAA+AGG + chr1.2:81992251-81992270 MS.gene065138:intron 35.0%
! AAGGGTTTTTCTTGAAAGGA+CGG + chr1.2:81991852-81991871 MS.gene065138:intron 35.0%
! ATAATCGAGTCCGTTTTGTA+AGG + chr1.2:81991111-81991130 MS.gene065138:intron 35.0%
! CTTTTCATTCCACTTCTGTT+AGG - chr1.2:81992146-81992165 None:intergenic 35.0%
! GAGTTAAGCTTGTAGTTTGT+GGG + chr1.2:81992874-81992893 MS.gene065138:intron 35.0%
! GTTCTGTAGTTTTCCATACA+AGG + chr1.2:81991362-81991381 MS.gene065138:intron 35.0%
! TGAAGGTACACATTACTTGT+TGG + chr1.2:81990660-81990679 MS.gene065138:intron 35.0%
! TGCCTTTAATCGGAGAATTT+TGG + chr1.2:81990897-81990916 MS.gene065138:intron 35.0%
! TGTGAAGCATTATGATGCTA+CGG - chr1.2:81989904-81989923 None:intergenic 35.0%
! TTCTTGATATATGGGGTACT+AGG - chr1.2:81990811-81990830 None:intergenic 35.0%
! TTTTCCTTCACAAGGCTTAT+AGG - chr1.2:81993098-81993117 None:intergenic 35.0%
!! ATTTCTAAGTTGGTTGGAAG+AGG - chr1.2:81993010-81993029 None:intergenic 35.0%
!! GTTCAAACGCAATATTTTGG+TGG + chr1.2:81990962-81990981 MS.gene065138:intron 35.0%
!! TTTCTAAGTTGGTTGGAAGA+GGG - chr1.2:81993009-81993028 None:intergenic 35.0%
!! TTTGTACAAGAGCACACTTT+TGG - chr1.2:81992252-81992271 None:intergenic 35.0%
!!! GCATGTTATTTTCCTTCACA+AGG - chr1.2:81993106-81993125 None:intergenic 35.0%
!!! TGTCATTTTAGTATAGTCGG+GGG + chr1.2:81991299-81991318 MS.gene065138:intron 35.0%
AAAAAGGGCAACCTATTAGC+GGG - chr1.2:81989859-81989878 None:intergenic 40.0%
AAACAAAGCTTGTCCTTCCA+TGG - chr1.2:81991643-81991662 None:intergenic 40.0%
AAACGTGTGATTAACCCATC+AGG + chr1.2:81990617-81990636 MS.gene065138:CDS 40.0%
AAACTTAGAGGAATTGCAGG+AGG + chr1.2:81989504-81989523 MS.gene065138:CDS 40.0%
AAAGAGTTCTTTGGCATGAC+TGG + chr1.2:81992671-81992690 MS.gene065138:intron 40.0%
AAATGACTATGGCATGGAAG+TGG + chr1.2:81992037-81992056 MS.gene065138:intron 40.0%
AACCAGCAGGTGAAAATGTT+CGG + chr1.2:81989295-81989314 MS.gene065138:CDS 40.0%
AAGAATGCCCAAGCTCTATT+TGG + chr1.2:81993319-81993338 MS.gene065138:intron 40.0%
AAGAGTTCTTTGGCATGACT+GGG + chr1.2:81992672-81992691 MS.gene065138:intron 40.0%
AGAATGCCCAAGCTCTATTT+GGG + chr1.2:81993320-81993339 MS.gene065138:intron 40.0%
AGAGCAACACAAAGTTTGAG+AGG + chr1.2:81992633-81992652 MS.gene065138:intron 40.0%
AGAGGTCAAAAATCTCGATC+TGG + chr1.2:81989423-81989442 MS.gene065138:CDS 40.0%
AGATGCTGGATTTCAAGAAG+GGG + chr1.2:81990565-81990584 MS.gene065138:CDS 40.0%
AGCTTGAAGATGAAGTTGTG+GGG + chr1.2:81992436-81992455 MS.gene065138:intron 40.0%
AGGATAAGGTGAAACTTGAG+AGG + chr1.2:81992817-81992836 MS.gene065138:intron 40.0%
AGTAGCCAAGGTGATATCAA+AGG + chr1.2:81992356-81992375 MS.gene065138:intron 40.0%
ATAAGTCATCTGTGTAGCCA+TGG + chr1.2:81991623-81991642 MS.gene065138:intron 40.0%
ATACGAGATTCGTTGTTCGA+TGG - chr1.2:81992336-81992355 None:intergenic 40.0%
ATATACTCCCAACTCCTTGA+TGG - chr1.2:81991449-81991468 None:intergenic 40.0%
CAAAAAACCTTACCGGAAGA+TGG + chr1.2:81993069-81993088 MS.gene065138:intron 40.0%
CACACTCAGGACTGAATATT+TGG - chr1.2:81993367-81993386 None:intergenic 40.0%
CAGGTGAAAATGTTCGGTTT+CGG + chr1.2:81989301-81989320 MS.gene065138:CDS 40.0%
CATTAGGTCTTCATGCATGT+AGG - chr1.2:81992309-81992328 None:intergenic 40.0%
CCTGCAATTCCTCTAAGTTT+GGG - chr1.2:81989504-81989523 None:intergenic 40.0%
CTATGTCTACCAGATTGATG+TGG - chr1.2:81990544-81990563 None:intergenic 40.0%
CTCAAACTCCTTCAACTAAC+AGG - chr1.2:81992857-81992876 None:intergenic 40.0%
CTTTGCCTTTGATATCACCT+TGG - chr1.2:81992364-81992383 None:intergenic 40.0%
GAAAATAACATGCTCGGCAA+CGG + chr1.2:81993113-81993132 MS.gene065138:intron 40.0%
GAACCAATGAAGAACAAAGC+TGG + chr1.2:81992187-81992206 MS.gene065138:intron 40.0%
GAAGATGCTGGATTTCAAGA+AGG + chr1.2:81990563-81990582 MS.gene065138:CDS 40.0%
GAGCTTGAAGATGAAGTTGT+GGG + chr1.2:81992435-81992454 MS.gene065138:intron 40.0%
GATTATGCGGTTGAGAAACA+CGG - chr1.2:81991097-81991116 None:intergenic 40.0%
GCTGTTGCTAAACATGAAGA+TGG + chr1.2:81992484-81992503 MS.gene065138:intron 40.0%
GGAAAAGATGTCTTTATGGG+TGG + chr1.2:81992165-81992184 MS.gene065138:intron 40.0%
GGAACGGAAACTTCTATTGA+AGG + chr1.2:81990643-81990662 MS.gene065138:CDS 40.0%
GGTGAGGAAGTAATTTCAGT+TGG + chr1.2:81991524-81991543 MS.gene065138:intron 40.0%
GTTGGATCAACAAGTTTGAG+AGG + chr1.2:81991562-81991581 MS.gene065138:intron 40.0%
GTTTCGGCAAAAAACCTTAC+CGG + chr1.2:81993062-81993081 MS.gene065138:intron 40.0%
TAATAAGGCTGCTTCTGCTT+CGG + chr1.2:81989269-81989288 MS.gene065138:CDS 40.0%
TCAAAACCTCTCATGATACC+AGG - chr1.2:81989450-81989469 None:intergenic 40.0%
TCCATGATTCGTAACCCATT+TGG + chr1.2:81991728-81991747 MS.gene065138:intron 40.0%
TCCTGCAATTCCTCTAAGTT+TGG - chr1.2:81989505-81989524 None:intergenic 40.0%
TGAAAATGTTCGGTTTCGGT+TGG + chr1.2:81989305-81989324 MS.gene065138:CDS 40.0%
TGAGCTTGAAGATGAAGTTG+TGG + chr1.2:81992434-81992453 MS.gene065138:intron 40.0%
TGTGATTAACCCATCAGGAA+GGG + chr1.2:81990622-81990641 MS.gene065138:CDS 40.0%
TTATGACACATCACCCAAGT+CGG - chr1.2:81991686-81991705 None:intergenic 40.0%
TTGGAATATAAGAGGTCCGT+TGG + chr1.2:81991019-81991038 MS.gene065138:intron 40.0%
TTGTTGGGTATGAAGCAAGA+GGG + chr1.2:81991755-81991774 MS.gene065138:intron 40.0%
TTTGCTCTCTTTCTTGAACC+TGG - chr1.2:81989348-81989367 None:intergenic 40.0%
TTTGTTGGGTATGAAGCAAG+AGG + chr1.2:81991754-81991773 MS.gene065138:intron 40.0%
! ACAAAACGGACTCGATTATG+CGG - chr1.2:81991110-81991129 None:intergenic 40.0%
! AGGACTGAATATTTGGAGTG+AGG - chr1.2:81993360-81993379 None:intergenic 40.0%
! TCTGGTTTCCTCATAAACTC+AGG + chr1.2:81993728-81993747 MS.gene065138:intron 40.0%
! TTTTTATTCTCCTCTGCCCT+AGG - chr1.2:81992074-81992093 None:intergenic 40.0%
!! AATGGGTTACGAATCATGGA+TGG - chr1.2:81991728-81991747 None:intergenic 40.0%
!! ACCAAATGGGTTACGAATCA+TGG - chr1.2:81991732-81991751 None:intergenic 40.0%
!! ACCTTACAAACTGGTCTTGT+CGG - chr1.2:81993298-81993317 None:intergenic 40.0%
!! CATATGAAATAGGTGTTGGG+AGG + chr1.2:81991591-81991610 MS.gene065138:intron 40.0%
!! CTTCCAGCTTTGTTCTTCAT+TGG - chr1.2:81992193-81992212 None:intergenic 40.0%
!! GGTATCATGAGAGGTTTTGA+AGG + chr1.2:81989450-81989469 MS.gene065138:CDS 40.0%
!! GTTCTGGATCCAGGTTTTTA+GGG - chr1.2:81993211-81993230 None:intergenic 40.0%
!!! AGTTGTGGTTTTGGAATGAG+AGG + chr1.2:81989405-81989424 MS.gene065138:CDS 40.0%
!!! ATCATGAGAGGTTTTGAAGG+TGG + chr1.2:81989453-81989472 MS.gene065138:CDS 40.0%
!!! GCAAGATTTTTGGCAACTGA+TGG - chr1.2:81994089-81994108 None:intergenic 40.0%
AAGAAAAGAGTCGGTCGGTT+TGG + chr1.2:81991945-81991964 MS.gene065138:intron 45.0%
AAGAGGGCTTAGGTTTGAGA+GGG + chr1.2:81991266-81991285 MS.gene065138:intron 45.0%
AAGGAGAAACTTGAGTCTGC+TGG + chr1.2:81994020-81994039 MS.gene065138:CDS 45.0%
AAGGCTTCCCAAATAGAGCT+TGG - chr1.2:81993330-81993349 None:intergenic 45.0%
AAGTTTCTCCTTCGCTGATG+TGG - chr1.2:81994012-81994031 None:intergenic 45.0%
AATGCTCCAAAACCCGACTT+GGG + chr1.2:81991670-81991689 MS.gene065138:intron 45.0%
ACCGACAAGACCAGTTTGTA+AGG + chr1.2:81993294-81993313 MS.gene065138:intron 45.0%
ACCTGGTAACCTAACAGAAG+TGG + chr1.2:81992134-81992153 MS.gene065138:intron 45.0%
ACTGGGAGTCAAACTGTCAA+AGG + chr1.2:81992689-81992708 MS.gene065138:intron 45.0%
ACTTCTGTTAGGTTACCAGG+TGG - chr1.2:81992135-81992154 None:intergenic 45.0%
AGAGCAAAGAGAAAGGGAAG+AGG + chr1.2:81989360-81989379 MS.gene065138:CDS 45.0%
AGATTGAAGCTACCCTTGGA+CGG + chr1.2:81991877-81991896 MS.gene065138:intron 45.0%
AGGCTTCCCAAATAGAGCTT+GGG - chr1.2:81993329-81993348 None:intergenic 45.0%
AGTATGCCTATTACAGGAGC+CGG + chr1.2:81990116-81990135 MS.gene065138:intron 45.0%
ATACGCTACCAAGTGGGAAA+AGG + chr1.2:81993659-81993678 MS.gene065138:intron 45.0%
ATCCATTGTGACGAAAAGCG+TGG - chr1.2:81993863-81993882 None:intergenic 45.0%
ATTCAGTCCTGAGTGTGTGA+GGG + chr1.2:81993370-81993389 MS.gene065138:intron 45.0%
ATTGCGCAAAAGCTCCCATT+TGG - chr1.2:81989754-81989773 None:intergenic 45.0%
CAAAAATCTCGATCTGGACC+TGG + chr1.2:81989429-81989448 MS.gene065138:CDS 45.0%
CAACACAAAGTTTGAGAGGC+GGG + chr1.2:81992637-81992656 MS.gene065138:intron 45.0%
CACATCATTGTTGAATGCGG+AGG + chr1.2:81992223-81992242 MS.gene065138:intron 45.0%
CATCAATGCATGAGCCTATG+CGG - chr1.2:81992539-81992558 None:intergenic 45.0%
CCCAAACTTAGAGGAATTGC+AGG + chr1.2:81989501-81989520 MS.gene065138:CDS 45.0%
CCTCCTGTATGGTTCAGTTT+CGG + chr1.2:81993046-81993065 MS.gene065138:intron 45.0%
CGAATCTCGTATAGTAGCCA+AGG + chr1.2:81992344-81992363 MS.gene065138:intron 45.0%
CGGTTTCGGTTGGACAATTT+GGG + chr1.2:81989315-81989334 MS.gene065138:CDS 45.0%
CTCTTTCTTGAACCTGGTTG+TGG - chr1.2:81989342-81989361 None:intergenic 45.0%
CTGGGAGTCAAACTGTCAAA+GGG + chr1.2:81992690-81992709 MS.gene065138:intron 45.0%
CTGGTAGACATAGAAGATGC+TGG + chr1.2:81990551-81990570 MS.gene065138:CDS 45.0%
CTTCTCTACTCCCTATACCA+AGG - chr1.2:81991326-81991345 None:intergenic 45.0%
CTTGATCACTCCCTAACAGT+AGG - chr1.2:81989974-81989993 None:intergenic 45.0%
GAGTGAAGAAAAGAGTCGGT+CGG + chr1.2:81991940-81991959 MS.gene065138:intron 45.0%
GATTCCTGGCCGTAAGAAAT+GGG + chr1.2:81994058-81994077 MS.gene065138:CDS 45.0%
GCAACACAAAGTTTGAGAGG+CGG + chr1.2:81992636-81992655 MS.gene065138:intron 45.0%
GCTTATAGGAAGCCATCTTC+CGG - chr1.2:81993084-81993103 None:intergenic 45.0%
GGAGTGAAATGACTATGGCA+TGG + chr1.2:81992031-81992050 MS.gene065138:intron 45.0%
GTCTTGCTGCAGCTAGAATA+AGG - chr1.2:81992767-81992786 None:intergenic 45.0%
GTGTGATTAACCCATCAGGA+AGG + chr1.2:81990621-81990640 MS.gene065138:CDS 45.0%
GTGTGCTCTTGTACAAAGGA+TGG + chr1.2:81992255-81992274 MS.gene065138:intron 45.0%
TATGACACATCACCCAAGTC+GGG - chr1.2:81991685-81991704 None:intergenic 45.0%
TATTCAGTCCTGAGTGTGTG+AGG + chr1.2:81993369-81993388 MS.gene065138:intron 45.0%
TCCACTTCTGTTAGGTTACC+AGG - chr1.2:81992138-81992157 None:intergenic 45.0%
TCGGTTTCGGTTGGACAATT+TGG + chr1.2:81989314-81989333 MS.gene065138:CDS 45.0%
TGACAACTTCAACCTTTGGG+TGG + chr1.2:81992408-81992427 MS.gene065138:intron 45.0%
TGATTCCTGGCCGTAAGAAA+TGG + chr1.2:81994057-81994076 MS.gene065138:CDS 45.0%
TGGATTTCAAGAAGGGGAAG+AGG + chr1.2:81990571-81990590 MS.gene065138:CDS 45.0%
TGTTCCATCACTGTGATTCC+TGG + chr1.2:81994044-81994063 MS.gene065138:CDS 45.0%
TTAACCCATCAGGAAGGGAA+CGG + chr1.2:81990627-81990646 MS.gene065138:CDS 45.0%
TTAACCCATTTCTTACGGCC+AGG - chr1.2:81994065-81994084 None:intergenic 45.0%
TTGCCGAAACTGAACCATAC+AGG - chr1.2:81993052-81993071 None:intergenic 45.0%
TTGGGCAATCGTCGATAAAG+TGG - chr1.2:81989486-81989505 None:intergenic 45.0%
TTGGTATCAAGGCTCCATCA+AGG + chr1.2:81991432-81991451 MS.gene065138:intron 45.0%
! AAAGGCACACATGGATGTCA+TGG + chr1.2:81991499-81991518 MS.gene065138:intron 45.0%
! AACCGAACATTTTCACCTGC+TGG - chr1.2:81989300-81989319 None:intergenic 45.0%
! CTTCTTGGCGAAGTATTCGT+CGG - chr1.2:81994117-81994136 None:intergenic 45.0%
! GCATGGAAGTGGAAGTTGAT+CGG + chr1.2:81992048-81992067 MS.gene065138:intron 45.0%
! GCTTCCTATAAGCCTTGTGA+AGG + chr1.2:81993091-81993110 MS.gene065138:intron 45.0%
! TAGCTGCAGCAAGACTGTTT+TGG + chr1.2:81992772-81992791 MS.gene065138:intron 45.0%
! TAGGCTCATGCATTGATGAG+AGG + chr1.2:81992541-81992560 MS.gene065138:intron 45.0%
! TTCCACGCTTTTCGTCACAA+TGG + chr1.2:81993858-81993877 MS.gene065138:intron 45.0%
! TTTGGAGTGAGGACAAACGA+AGG - chr1.2:81993349-81993368 None:intergenic 45.0%
!! GTACAAGAGCACACTTTTGG+TGG - chr1.2:81992249-81992268 None:intergenic 45.0%
!! GTTGTTCGATGGTGGACATT+AGG - chr1.2:81992325-81992344 None:intergenic 45.0%
!! GTTTGTTGTGCTCTGGTTTC+AGG + chr1.2:81993932-81993951 MS.gene065138:intron 45.0%
!!! GGTTCTGGATCCAGGTTTTT+AGG - chr1.2:81993212-81993231 None:intergenic 45.0%
!!! GTGCTCTGGTTTCAGGTTTT+GGG + chr1.2:81993939-81993958 MS.gene065138:intron 45.0%
!!! TGGATCCAGGTTTTTAGGGT+TGG - chr1.2:81993207-81993226 None:intergenic 45.0%
!!! TGGTTTCAGGTTTTGGGTGA+AGG + chr1.2:81993945-81993964 MS.gene065138:intron 45.0%
!!! TGTGCTCTGGTTTCAGGTTT+TGG + chr1.2:81993938-81993957 MS.gene065138:intron 45.0%
!!! TTTTATAAAAAAACATAATA+AGG + chr1.2:81990491-81990510 MS.gene065138:intron 5.0%
!!! TTTTATAAAAATAAAAGAAA+AGG - chr1.2:81990481-81990500 None:intergenic 5.0%
AGGGCTTGTGCATGAATGCA+AGG + chr1.2:81991774-81991793 MS.gene065138:intron 50.0%
AGTTTCCGTTCCCTTCCTGA+TGG - chr1.2:81990635-81990654 None:intergenic 50.0%
ATTACCGAACAGGGGACAGT+AGG + chr1.2:81992096-81992115 MS.gene065138:intron 50.0%
CAAGGCTCCATCAAGGAGTT+GGG + chr1.2:81991439-81991458 MS.gene065138:intron 50.0%
CAATCCTACTGTCCCCTGTT+CGG - chr1.2:81992103-81992122 None:intergenic 50.0%
CAATGCTCCAAAACCCGACT+TGG + chr1.2:81991669-81991688 MS.gene065138:intron 50.0%
CATGGATGTCATGGATGGTG+AGG + chr1.2:81991508-81991527 MS.gene065138:intron 50.0%
CCGAAACTGAACCATACAGG+AGG - chr1.2:81993049-81993068 None:intergenic 50.0%
CGACGATTGCCCAAACTTAG+AGG + chr1.2:81989492-81989511 MS.gene065138:CDS 50.0%
CGAGATTCGTTGTTCGATGG+TGG - chr1.2:81992333-81992352 None:intergenic 50.0%
CTACCAAGTGGGAAAAGGCA+TGG + chr1.2:81993664-81993683 MS.gene065138:intron 50.0%
CTCCTTCGCTGATGTGGAAA+AGG - chr1.2:81994006-81994025 None:intergenic 50.0%
GAAGAGGGCTTAGGTTTGAG+AGG + chr1.2:81991265-81991284 MS.gene065138:intron 50.0%
GACAATTTGGGTCCACAACC+AGG + chr1.2:81989327-81989346 MS.gene065138:CDS 50.0%
GATTGAAGCTACCCTTGGAC+GGG + chr1.2:81991878-81991897 MS.gene065138:intron 50.0%
GCACACATGGATGTCATGGA+TGG + chr1.2:81991503-81991522 MS.gene065138:intron 50.0%
GCAGGCGTCAAAGAGTTCTT+TGG + chr1.2:81992662-81992681 MS.gene065138:intron 50.0%
GCATATCCGGCTCCTGTAAT+AGG - chr1.2:81990125-81990144 None:intergenic 50.0%
GGCAAGATTGAAGCTACCCT+TGG + chr1.2:81991873-81991892 MS.gene065138:intron 50.0%
GGCCAACTGAAGACTCATCA+GGG - chr1.2:81992988-81993007 None:intergenic 50.0%
GGTTACGAATCATGGATGGC+TGG - chr1.2:81991724-81991743 None:intergenic 50.0%
GTCATCTGTGTAGCCATGGA+AGG + chr1.2:81991627-81991646 MS.gene065138:intron 50.0%
GTTTCCGTTCCCTTCCTGAT+GGG - chr1.2:81990634-81990653 None:intergenic 50.0%
TAGGAAGCCATCTTCCGGTA+AGG - chr1.2:81993079-81993098 None:intergenic 50.0%
TCAAGCTCAATGCCACCCAA+AGG - chr1.2:81992423-81992442 None:intergenic 50.0%
TCAAGGCTCCATCAAGGAGT+TGG + chr1.2:81991438-81991457 MS.gene065138:intron 50.0%
TCCAATAGTGACCCGTCCAA+GGG - chr1.2:81991892-81991911 None:intergenic 50.0%
TCTGGACCTGGTATCATGAG+AGG + chr1.2:81989441-81989460 MS.gene065138:CDS 50.0%
TGCTCTTTGAGCCTCCTGTA+TGG + chr1.2:81993035-81993054 MS.gene065138:intron 50.0%
TGGGGAAGATGCATCTGTGT+TGG + chr1.2:81991544-81991563 MS.gene065138:intron 50.0%
TTAGTATAGTCGGGGGTCCT+TGG + chr1.2:81991306-81991325 MS.gene065138:intron 50.0%
TTCAAAGAGGCTGACCGCAT+AGG + chr1.2:81992522-81992541 MS.gene065138:intron 50.0%
TTCAGTCCTGAGTGTGTGAG+GGG + chr1.2:81993371-81993390 MS.gene065138:intron 50.0%
! AAGTGGAAGTTGATCGGCCT+AGG + chr1.2:81992054-81992073 MS.gene065138:intron 50.0%
! ACATCACCCAAGTCGGGTTT+TGG - chr1.2:81991679-81991698 None:intergenic 50.0%
! AGTGGAAGTTGATCGGCCTA+GGG + chr1.2:81992055-81992074 MS.gene065138:intron 50.0%
! CAAGGAGCGAGTTGTGGTTT+TGG + chr1.2:81989396-81989415 MS.gene065138:CDS 50.0%
! GCTTGTAGTTTGTGGGAGCT+AGG + chr1.2:81992881-81992900 MS.gene065138:intron 50.0%
! GTCGGCACGTGCAAGATTTT+TGG - chr1.2:81994099-81994118 None:intergenic 50.0%
! TGCCTTTTCCACATCAGCGA+AGG + chr1.2:81994001-81994020 MS.gene065138:CDS 50.0%
!! CTGGTCTTGTCGGTTCAGTT+AGG - chr1.2:81993288-81993307 None:intergenic 50.0%
!! TCTAGGGTTAGCCTTGACGA+CGG + chr1.2:81993181-81993200 MS.gene065138:intron 50.0%
AAGTTTGAGAGGCGGGATGC+AGG + chr1.2:81992644-81992663 MS.gene065138:intron 55.0%
ACAACTCGCTCCTTGTCCTG+CGG - chr1.2:81989391-81989410 None:intergenic 55.0%
ACCCTTGGACGGGTCACTAT+TGG + chr1.2:81991888-81991907 MS.gene065138:intron 55.0%
ACGGCCAGGAATCACAGTGA+TGG - chr1.2:81994051-81994070 None:intergenic 55.0%
AGCAGCTGCTTCTCGCTTCT+TGG - chr1.2:81994132-81994151 None:intergenic 55.0%
AGTCGGGGGTCCTTGGTATA+GGG + chr1.2:81991313-81991332 MS.gene065138:intron 55.0%
CAGGGGACAGTAGGATTGCA+AGG + chr1.2:81992105-81992124 MS.gene065138:intron 55.0%
CTCCAATAGTGACCCGTCCA+AGG - chr1.2:81991893-81991912 None:intergenic 55.0%
CTTGGACGGGTCACTATTGG+AGG + chr1.2:81991891-81991910 MS.gene065138:intron 55.0%
GACGGCCAACCCTAAAAACC+TGG + chr1.2:81993199-81993218 MS.gene065138:intron 55.0%
GGATTGCAAGGTCAACCACC+TGG + chr1.2:81992117-81992136 MS.gene065138:intron 55.0%
GGCCCTGATGAGTCTTCAGT+TGG + chr1.2:81992983-81993002 MS.gene065138:intron 55.0%
GGGCCAACTGAAGACTCATC+AGG - chr1.2:81992989-81993008 None:intergenic 55.0%
TAGTCGGGGGTCCTTGGTAT+AGG + chr1.2:81991312-81991331 MS.gene065138:intron 55.0%
TCTGCTTCGGTGAAACCAGC+AGG + chr1.2:81989282-81989301 MS.gene065138:CDS 55.0%
! AGTGGGAAAAGGCATGGTGG+TGG + chr1.2:81993670-81993689 MS.gene065138:intron 55.0%
! CCAAGTGGGAAAAGGCATGG+TGG + chr1.2:81993667-81993686 MS.gene065138:intron 55.0%
! CCACCATGCCTTTTCCCACT+TGG - chr1.2:81993670-81993689 None:intergenic 55.0%
! GGTGTCTCTGGAGACACTGA+CGG + chr1.2:81990592-81990611 MS.gene065138:CDS 55.0%
!! AAGGGAAGAGGTATTGCCGC+AGG + chr1.2:81989372-81989391 MS.gene065138:CDS 55.0%
!! AGAAGGGGAAGAGGTGTCTC+TGG + chr1.2:81990580-81990599 MS.gene065138:CDS 55.0%
!! AGAGGTATTGCCGCAGGACA+AGG + chr1.2:81989378-81989397 MS.gene065138:CDS 55.0%
!! TTTAGGGTTGGCCGTCGTCA+AGG - chr1.2:81993195-81993214 None:intergenic 55.0%
ACACCTCCCCTCACACACTC+AGG - chr1.2:81993380-81993399 None:intergenic 60.0%
AGTCCTGAGTGTGTGAGGGG+AGG + chr1.2:81993374-81993393 MS.gene065138:intron 60.0%
AGTTGATCGGCCTAGGGCAG+AGG + chr1.2:81992061-81992080 MS.gene065138:intron 60.0%
CCTGGATCCAGAACCTGCTC+TGG + chr1.2:81993217-81993236 MS.gene065138:intron 60.0%
GCAGGACAAGGAGCGAGTTG+TGG + chr1.2:81989390-81989409 MS.gene065138:CDS 60.0%
!! CCAGAGCAGGTTCTGGATCC+AGG - chr1.2:81993220-81993239 None:intergenic 60.0%
CATGCTCGGCAACGGCAGTG+CGG + chr1.2:81993121-81993140 MS.gene065138:intron 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 81989246 81994172 81989246 ID=MS.gene065138
chr1.2 mRNA 81989246 81994172 81989246 ID=MS.gene065138.t1;Parent=MS.gene065138
chr1.2 exon 81989246 81989525 81989246 ID=MS.gene065138.t1.exon1;Parent=MS.gene065138.t1
chr1.2 CDS 81989246 81989525 81989246 ID=cds.MS.gene065138.t1;Parent=MS.gene065138.t1
chr1.2 exon 81990513 81990664 81990513 ID=MS.gene065138.t1.exon2;Parent=MS.gene065138.t1
chr1.2 CDS 81990513 81990664 81990513 ID=cds.MS.gene065138.t1;Parent=MS.gene065138.t1
chr1.2 exon 81993954 81994172 81993954 ID=MS.gene065138.t1.exon3;Parent=MS.gene065138.t1
chr1.2 CDS 81993954 81994172 81993954 ID=cds.MS.gene065138.t1;Parent=MS.gene065138.t1
Gene Sequence

>MS.gene065138

ATGAAACCTCGTGTTTTTGTTGTTAATAAGGCTGCTTCTGCTTCGGTGAAACCAGCAGGTGAAAATGTTCGGTTTCGGTTGGACAATTTGGGTCCACAACCAGGTTCAAGAAAGAGAGCAAAGAGAAAGGGAAGAGGTATTGCCGCAGGACAAGGAGCGAGTTGTGGTTTTGGAATGAGAGGTCAAAAATCTCGATCTGGACCTGGTATCATGAGAGGTTTTGAAGGTGGTCAGATGCCACTTTATCGACGATTGCCCAAACTTAGAGGAATTGCAGGAGGTATCTCTTCTTACACAACACTTGGGAATTTACCTATTGTTTTATTGTTGAAATTTGTTGTTTACGAATTTTGAAAATAATGTTTTCAACTATGGTGGTTATGATTGATTGACATTGTAATTCAATGATGGTATATACGAATTAAATTCTTACATAATACGAAGTGATGTTCAAACTTGTGTATTATACATTTTGTTAATAAGTTAATTTTTAGTCTATATACTACCAAATGGGAGCTTTTGCGCAATTGTTAGAGATGCAATTTGAGTTGAAAGTCAGATATTCATGAAATTTGCAGTATCTTAGAAATACAAGATTGAATATAATTTGCCCGCTAATAGGTTGCCCTTTTTTTACGATGTTTTGTTAAATTGTCCGTAGCATCATAATGCTTCACATGGAGTTTAAATGGATTTTGTTGAATTATATTAGGATAATTTAGGATCCTACTGTTAGGGAGTGATCAAGAAAGATGCTACATGTAGCATCATTAGTAGGAAAAAACAATGGTTAGATGAGAATTGTGATTCCTGGTTGCAGATTGATTATGTATACTTGTTGCGTGCCTACATCACATTTGAAAGTCATGAAGTATGCCTATTACAGGAGCCGGATATGCTGTTGTATATATCCCTAATATGTAGATTTTCAAAGAAATTATAGTAGATTCCCTTTATTGACATCTTGAAATGGTGATTATTGTCTGAAGAGAATCATGGCATTATGGATTATACCAAGCTTCCAATACCTAAATTTCTCTTCCTCAGTTCTTATTATGCTTGACATCTTTACTTATTCTATATTTTTTCCCCTTATTCTTCCATATCCTTCCATGATTTCATTTCAAAAGCAATTATTTTATGAAAGGTTTTTCTTTCATTCTTTGTCGTAGGATCTCTCTTAATTTATTTAGTATATGCATAAATCTCGCTTGGAATCATGTTTTAATGTTCCTTTTCTTTTATTTTTATAAAAAAACATAATAAGGTATGCATGCTGGATTGCCGAAATATGTCCACATCAATCTGGTAGACATAGAAGATGCTGGATTTCAAGAAGGGGAAGAGGTGTCTCTGGAGACACTGACGGAGAAACGTGTGATTAACCCATCAGGAAGGGAACGGAAACTTCTATTGAAGGTACACATTACTTGTTGGTTTATGGCTATCTAAGTTTTTTCCCTTAGTTGTTGTCTTACATGTTCATTTCTGTGATTGTTTTCATGATGTCTAGAGGTATTACGATGTTTCACTTTTAAAAACAAATGAGGATGGTTAATTTTCCTAGTACCCCATATATCAAGAAAGACTTCTGATATGAGGTCCCTTGTCTATCGTGAATAAAGTTACTTTCTTTAAAATTTTCATATTATGCCTTTAATCGGAGAATTTTGGTTGTGCTTAGACATATGTTGTTTGTTTATGATATGTATGTAAGTTCAAACGCAATATTTTGGTGGCTGTGTTTGTGTTTTGAATTTGAAACTGTAAAAGTTGGAATATAAGAGGTCCGTTGGTTGAAAGAGTTAAAGTTAGTTAATGGATGTTGGGATATTAGAGATGTTGAAACCGTGTTTCTCAACCGCATAATCGAGTCCGTTTTGTAAGGCTCAAAGAAATAATTACAATATAAATACAATCGATTTTATTCTTATTTATGCCTATAGTTAATCTAAAATAATCACAAAGATCCTAAACATATTTTCAACAAGAGAAATAAGGCATGTTGTCTATAAATAAGAAGAGGGCTTAGGTTTGAGAGGGAGAGATATCTTGTCATTTTAGTATAGTCGGGGGTCCTTGGTATAGGGAGTAGAGAAGATTGCAGACCTTTGAAGTTCTGTAGTTTTCCATACAAGGAAATTTTCCCTAAATGTACATTTAATTAAAATATCAATTTCTGTCTATTGGTATCAAGGCTCCATCAAGGAGTTGGGAGTATATCATTGAAGATTATGTGGCGTGAATAAGAATAAAGGCACACATGGATGTCATGGATGGTGAGGAAGTAATTTCAGTTGGGGAAGATGCATCTGTGTTGGATCAACAAGTTTGAGAGGTATTTTCATATGAAATAGGTGTTGGGAGGAGAAAGATTATAAGTCATCTGTGTAGCCATGGAAGGACAAGCTTTGTTTTTGTTTCAATGCTCCAAAACCCGACTTGGGTGATGTGTCATAATGTTATTAGGTGTTTCCAGCCATCCATGATTCGTAACCCATTTGGTATTTTGTTGGGTATGAAGCAAGAGGGCTTGTGCATGAATGCAAGGATCAATTTGACATACAGGTCAGGTTGTTGCATCTGCTACCAGATAGAATATTTAAAAGGGTTTTTCTTGAAAGGACGGCAAGATTGAAGCTACCCTTGGACGGGTCACTATTGGAGGAGATGAATTTGGAAGAAACTATAAATGAGTGAAGAAAAGAGTCGGTCGGTTTGGAAATGAGCAAAGAGAGAATTCAAGAATATAAAATGGAGAAGTAAGAAGAAAGGTGAAAGAAATGGAGTGAAATGACTATGGCATGGAAGTGGAAGTTGATCGGCCTAGGGCAGAGGAGAATAAAAAAGATTACCGAACAGGGGACAGTAGGATTGCAAGGTCAACCACCTGGTAACCTAACAGAAGTGGAATGAAAAGGAAAAGATGTCTTTATGGGTGGAACCAATGAAGAACAAAGCTGGAAGAAACATGTGTCACATCATTGTTGAATGCGGAGGCCACCAAAAGTGTGCTCTTGTACAAAGGATGGTAGACCATTACAAATTGTGAAACTCTGACCTACATGCATGAAGACCTAATGTCCACCATCGAACAACGAATCTCGTATAGTAGCCAAGGTGATATCAAAGGCAAAGATGAAGCCAAATATGTTTAGAATCTGACAACTTCAACCTTTGGGTGGCATTGAGCTTGAAGATGAAGTTGTGGGGAAACATCGTTCAAATTCTGACCTATGCTGTTGCTAAACATGAAGATGGATTGTTGGATTGTATTTCAAAGAGGCTGACCGCATAGGCTCATGCATTGATGAGAGGCAGATTAATGGACAAGACTTCCTTTATAAGAAGAGGTAGATACTGAACATTGCCAAGTATTATTCATGTAGAGCAACACAAAGTTTGAGAGGCGGGATGCAGGCGTCAAAGAGTTCTTTGGCATGACTGGGAGTCAAACTGTCAAAGGGACGAACTACTACATCAAGCTAAAAGGGACTCAGCTTTTCAACAAATTGATACCTTATTCTAGCTGCAGCAAGACTGTTTTGGTTTATTAATCTTTTTCACTTTAAGGATAAGGTGAAACTTGAGAGGAGAGTATTGATACACCTGTTAGTTGAAGGAGTTTGAGTTAAGCTTGTAGTTTGTGGGAGCTAGGATTATTAGAGAAATAATGTGTGCTGTCTATATATAAGAAGAGGCTGAAGGAGAGATATCTTGTATTTTTAATAGAGCTGGGCCCTGATGAGTCTTCAGTTGGCCCTCTTCCAACCAACTTAGAAATAGAATTGCTCTTTGAGCCTCCTGTATGGTTCAGTTTCGGCAAAAAACCTTACCGGAAGATGGCTTCCTATAAGCCTTGTGAAGGAAAATAACATGCTCGGCAACGGCAGTGCGGTCACTATTTCGAAATAGACAGCAAACATGCATAAACTTCTAGGGTTAGCCTTGACGACGGCCAACCCTAAAAACCTGGATCCAGAACCTGCTCTGGTAACAGCGTATTTAGAGTATACTCTAATATCATTTAGAATTTTGGCCTAACTGAACCGACAAGACCAGTTTGTAAGGTAAAGAATGCCCAAGCTCTATTTGGGAAGCCTTCGTTTGTCCTCACTCCAAATATTCAGTCCTGAGTGTGTGAGGGGAGGTGTTGAGATTTTACACTAACTAGAGAGTGAGTGTTAAAAGATAAGAAATTAATCATATGAGATGCTTCAAGATACTGTAACATACACAATATTACAACTTTACCAATACTTTTCATATCTACGAATACTAGTAATTCATTTCTAAAGTGATATTTAGCGGTTGAAAGAAACTGTAGCATGTTCTGGAAAATTACTGCACTACTTCTAGCATCATGAATTTTGTTGGTTCAGTTTTATCGTATTCGTTATCTGTAAACATATAATACGCTACCAAGTGGGAAAAGGCATGGTGGTGGTTGTTGCTACAATTGCCATTATTTGAAAGAGCTCTTCTGGTTTCCTCATAAACTCAGGAAAATATTTGCAAAAAACATAGTTTCAATTTCAAACAACTTATACAGGCTAGCATTTAGCAAGTTGTATACTTCTAATTAGTCATGCATTGGGCACTGAACACAAAGTTCCACGCTTTTCGTCACAATGGATCAAGTACACATACACAATATATTTTTAAAAAGGAAATATAAAAATAATAGTTTGTTGTGCTCTGGTTTCAGGTTTTGGGTGAAGGAGAACTAAGCAAGAAGTTGACAATAAAAGCTGGTGCCTTTTCCACATCAGCGAAGGAGAAACTTGAGTCTGCTGGTTGTTCCATCACTGTGATTCCTGGCCGTAAGAAATGGGTTAAGCCATCAGTTGCCAAAAATCTTGCACGTGCCGACGAATACTTCGCCAAGAAGCGAGAAGCAGCTGCTTCTGAACCAGATTCTGTTTAA

Protein sequence

>MS.gene065138.t1

MKPRVFVVNKAASASVKPAGENVRFRLDNLGPQPGSRKRAKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRLPKLRGIAGGMHAGLPKYVHINLVDIEDAGFQEGEEVSLETLTEKRVINPSGRERKLLLKVLGEGELSKKLTIKAGAFSTSAKEKLESAGCSITVIPGRKKWVKPSVAKNLARADEYFAKKREAAASEPDSV