Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24628.t1 | RHN48623.1 | 99.7 | 289 | 1 | 0 | 1 | 289 | 1 | 289 | 1.60E-124 | 455.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24628.t1 | Q6V9I6 | 51.0 | 290 | 117 | 8 | 1 | 288 | 1 | 267 | 6.0e-35 | 149.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24628.t1 | A0A396H772 | 99.7 | 289 | 1 | 0 | 1 | 289 | 1 | 289 | 1.2e-124 | 455.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene24628.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene24628 | 0.819487 | 1.13E-52 | -1.69E-46 |
| MS.gene049255 | MS.gene24628 | 0.817522 | 3.16E-52 | -1.69E-46 |
| MS.gene049343 | MS.gene24628 | 0.832029 | 1.19E-55 | -1.69E-46 |
| MS.gene049350 | MS.gene24628 | 0.800254 | 1.57E-48 | -1.69E-46 |
| MS.gene049631 | MS.gene24628 | 0.800352 | 1.50E-48 | -1.69E-46 |
| MS.gene049672 | MS.gene24628 | 0.826488 | 2.64E-54 | -1.69E-46 |
| MS.gene049821 | MS.gene24628 | 0.812462 | 4.19E-51 | -1.69E-46 |
| MS.gene049824 | MS.gene24628 | 0.800666 | 1.30E-48 | -1.69E-46 |
| MS.gene049825 | MS.gene24628 | 0.818617 | 1.78E-52 | -1.69E-46 |
| MS.gene049850 | MS.gene24628 | 0.83317 | 6.22E-56 | -1.69E-46 |
| MS.gene049873 | MS.gene24628 | 0.839809 | 1.27E-57 | -1.69E-46 |
| MS.gene050355 | MS.gene24628 | 0.806523 | 7.89E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene24628 | 0.826938 | 2.06E-54 | -1.69E-46 |
| MS.gene050561 | MS.gene24628 | 0.814558 | 1.45E-51 | -1.69E-46 |
| MS.gene050689 | MS.gene24628 | 0.803866 | 2.84E-49 | -1.69E-46 |
| MS.gene050799 | MS.gene24628 | 0.828274 | 9.85E-55 | -1.69E-46 |
| MS.gene050905 | MS.gene24628 | -0.805419 | 1.35E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene24628 | 0.802646 | 5.08E-49 | -1.69E-46 |
| MS.gene05134 | MS.gene24628 | 0.83733 | 5.54E-57 | -1.69E-46 |
| MS.gene051363 | MS.gene24628 | 0.801496 | 8.76E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene24628 | 0.810872 | 9.29E-51 | -1.69E-46 |
| MS.gene051720 | MS.gene24628 | 0.813668 | 2.28E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene24628 | 0.843732 | 1.17E-58 | -1.69E-46 |
| MS.gene051957 | MS.gene24628 | 0.832446 | 9.41E-56 | -1.69E-46 |
| MS.gene051975 | MS.gene24628 | 0.809554 | 1.79E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene24628 | 0.85628 | 3.58E-62 | -1.69E-46 |
| MS.gene052582 | MS.gene24628 | 0.824836 | 6.50E-54 | -1.69E-46 |
| MS.gene052584 | MS.gene24628 | 0.839715 | 1.34E-57 | -1.69E-46 |
| MS.gene052611 | MS.gene24628 | 0.815526 | 8.84E-52 | -1.69E-46 |
| MS.gene052773 | MS.gene24628 | 0.805601 | 1.23E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene24628 | 0.829199 | 5.88E-55 | -1.69E-46 |
| MS.gene052879 | MS.gene24628 | 0.800567 | 1.36E-48 | -1.69E-46 |
| MS.gene053006 | MS.gene24628 | 0.810875 | 9.27E-51 | -1.69E-46 |
| MS.gene053008 | MS.gene24628 | 0.810287 | 1.24E-50 | -1.69E-46 |
| MS.gene053122 | MS.gene24628 | 0.820783 | 5.71E-53 | -1.69E-46 |
| MS.gene053146 | MS.gene24628 | 0.812444 | 4.23E-51 | -1.69E-46 |
| MS.gene053195 | MS.gene24628 | 0.819148 | 1.35E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene24628 | 0.870207 | 1.74E-66 | -1.69E-46 |
| MS.gene053272 | MS.gene24628 | -0.806039 | 9.98E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene24628 | 0.851101 | 1.10E-60 | -1.69E-46 |
| MS.gene053900 | MS.gene24628 | 0.837356 | 5.45E-57 | -1.69E-46 |
| MS.gene053931 | MS.gene24628 | 0.826729 | 2.31E-54 | -1.69E-46 |
| MS.gene054142 | MS.gene24628 | 0.808556 | 2.92E-50 | -1.69E-46 |
| MS.gene054582 | MS.gene24628 | 0.815624 | 8.40E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene24628 | 0.847444 | 1.15E-59 | -1.69E-46 |
| MS.gene054657 | MS.gene24628 | 0.803593 | 3.24E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene24628 | 0.803245 | 3.82E-49 | -1.69E-46 |
| MS.gene055374 | MS.gene24628 | 0.828553 | 8.43E-55 | -1.69E-46 |
| MS.gene055466 | MS.gene24628 | 0.802575 | 5.26E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene24628 | 0.80775 | 4.34E-50 | -1.69E-46 |
| MS.gene055512 | MS.gene24628 | 0.802356 | 5.83E-49 | -1.69E-46 |
| MS.gene055555 | MS.gene24628 | 0.83074 | 2.48E-55 | -1.69E-46 |
| MS.gene055586 | MS.gene24628 | 0.823836 | 1.12E-53 | -1.69E-46 |
| MS.gene055589 | MS.gene24628 | 0.813433 | 2.57E-51 | -1.69E-46 |
| MS.gene055694 | MS.gene24628 | 0.827479 | 1.53E-54 | -1.69E-46 |
| MS.gene055778 | MS.gene24628 | 0.819998 | 8.65E-53 | -1.69E-46 |
| MS.gene055808 | MS.gene24628 | 0.816442 | 5.52E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene24628 | 0.839598 | 1.44E-57 | -1.69E-46 |
| MS.gene055841 | MS.gene24628 | 0.834535 | 2.83E-56 | -1.69E-46 |
| MS.gene056215 | MS.gene24628 | 0.838538 | 2.71E-57 | -1.69E-46 |
| MS.gene056366 | MS.gene24628 | 0.813882 | 2.04E-51 | -1.69E-46 |
| MS.gene056595 | MS.gene24628 | 0.818985 | 1.47E-52 | -1.69E-46 |
| MS.gene056642 | MS.gene24628 | 0.813585 | 2.38E-51 | -1.69E-46 |
| MS.gene05690 | MS.gene24628 | 0.805002 | 1.65E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene24628 | 0.839236 | 1.79E-57 | -1.69E-46 |
| MS.gene057102 | MS.gene24628 | 0.825658 | 4.16E-54 | -1.69E-46 |
| MS.gene057208 | MS.gene24628 | 0.846888 | 1.64E-59 | -1.69E-46 |
| MS.gene057598 | MS.gene24628 | 0.840748 | 7.21E-58 | -1.69E-46 |
| MS.gene057693 | MS.gene24628 | 0.839561 | 1.47E-57 | -1.69E-46 |
| MS.gene057694 | MS.gene24628 | 0.827607 | 1.43E-54 | -1.69E-46 |
| MS.gene057705 | MS.gene24628 | 0.837569 | 4.81E-57 | -1.69E-46 |
| MS.gene057855 | MS.gene24628 | 0.813666 | 2.28E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene24628 | 0.811408 | 7.11E-51 | -1.69E-46 |
| MS.gene058008 | MS.gene24628 | 0.810467 | 1.14E-50 | -1.69E-46 |
| MS.gene058009 | MS.gene24628 | 0.823782 | 1.15E-53 | -1.69E-46 |
| MS.gene058037 | MS.gene24628 | 0.820919 | 5.32E-53 | -1.69E-46 |
| MS.gene058088 | MS.gene24628 | 0.819235 | 1.29E-52 | -1.69E-46 |
| MS.gene058216 | MS.gene24628 | 0.803272 | 3.77E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene24628 | 0.845101 | 5.01E-59 | -1.69E-46 |
| MS.gene058783 | MS.gene24628 | 0.840593 | 7.92E-58 | -1.69E-46 |
| MS.gene058979 | MS.gene24628 | 0.81483 | 1.26E-51 | -1.69E-46 |
| MS.gene059151 | MS.gene24628 | 0.807536 | 4.82E-50 | -1.69E-46 |
| MS.gene05954 | MS.gene24628 | 0.831587 | 1.53E-55 | -1.69E-46 |
| MS.gene059625 | MS.gene24628 | 0.815439 | 9.24E-52 | -1.69E-46 |
| MS.gene059842 | MS.gene24628 | 0.802885 | 4.54E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene24628 | -0.835996 | 1.21E-56 | -1.69E-46 |
| MS.gene059935 | MS.gene24628 | 0.835964 | 1.23E-56 | -1.69E-46 |
| MS.gene060365 | MS.gene24628 | 0.817614 | 3.01E-52 | -1.69E-46 |
| MS.gene060429 | MS.gene24628 | 0.863951 | 1.72E-64 | -1.69E-46 |
| MS.gene060521 | MS.gene24628 | 0.828657 | 7.96E-55 | -1.69E-46 |
| MS.gene060572 | MS.gene24628 | 0.802102 | 6.58E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene24628 | 0.803981 | 2.69E-49 | -1.69E-46 |
| MS.gene060917 | MS.gene24628 | 0.820328 | 7.27E-53 | -1.69E-46 |
| MS.gene060935 | MS.gene24628 | 0.828325 | 9.57E-55 | -1.69E-46 |
| MS.gene060937 | MS.gene24628 | 0.801222 | 9.97E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24628.t1 | MTR_2g084815 | 43.087 | 311 | 146 | 7 | 1 | 289 | 1 | 302 | 3.07e-52 | 173 |
| MS.gene24628.t1 | MTR_2g084815 | 40.193 | 311 | 132 | 7 | 1 | 289 | 1 | 279 | 1.36e-44 | 152 |
| MS.gene24628.t1 | MTR_2g084815 | 43.725 | 247 | 113 | 6 | 1 | 225 | 1 | 243 | 1.63e-33 | 123 |
| MS.gene24628.t1 | MTR_4g055440 | 39.200 | 250 | 133 | 6 | 1 | 247 | 5 | 238 | 5.60e-33 | 122 |
| MS.gene24628.t1 | MTR_2g084815 | 50.376 | 133 | 58 | 3 | 1 | 129 | 1 | 129 | 1.30e-30 | 115 |
| MS.gene24628.t1 | MTR_4g055450 | 44.211 | 95 | 39 | 2 | 2 | 94 | 6 | 88 | 5.84e-17 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24628.t1 | AT5G03740 | 44.040 | 302 | 145 | 10 | 1 | 288 | 1 | 292 | 1.51e-47 | 160 |
| MS.gene24628.t1 | AT3G44750 | 55.319 | 94 | 41 | 1 | 1 | 94 | 1 | 93 | 1.69e-27 | 107 |
| MS.gene24628.t1 | AT3G44750 | 55.319 | 94 | 41 | 1 | 1 | 94 | 1 | 93 | 1.81e-27 | 107 |
| MS.gene24628.t1 | AT5G22650 | 36.054 | 294 | 152 | 9 | 1 | 269 | 1 | 283 | 7.45e-25 | 101 |
| MS.gene24628.t1 | AT5G22650 | 36.120 | 299 | 146 | 11 | 1 | 269 | 1 | 284 | 2.08e-23 | 97.8 |
| MS.gene24628.t1 | AT2G27840 | 42.708 | 96 | 51 | 3 | 1 | 94 | 1 | 94 | 4.71e-17 | 77.0 |
| MS.gene24628.t1 | AT2G27840 | 42.708 | 96 | 51 | 3 | 1 | 94 | 1 | 94 | 6.74e-17 | 77.8 |
| MS.gene24628.t1 | AT2G27840 | 42.708 | 96 | 51 | 3 | 1 | 94 | 1 | 94 | 2.34e-16 | 74.7 |
Find 66 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTGCAGTCATGGAGTTT+TGG | 0.186768 | 7.3:+10367353 | None:intergenic |
| CGCTCCCATATTTCCAGTTA+TGG | 0.260338 | 7.3:-10368987 | None:intergenic |
| CTATCCCATAACTGGAAATA+TGG | 0.264248 | 7.3:+10368982 | MS.gene24628:CDS |
| CTTTATATGACAGGCATGTT+TGG | 0.291541 | 7.3:+10368819 | MS.gene24628:intron |
| TTTGGAGTCTCCTGCTTCTC+TGG | 0.303491 | 7.3:-10371238 | None:intergenic |
| TTTATATGACAGGCATGTTT+GGG | 0.313274 | 7.3:+10368820 | MS.gene24628:intron |
| TGCCTTAGGTTCTCATAATA+AGG | 0.315168 | 7.3:+10371405 | MS.gene24628:CDS |
| CAACTCCAATCACCTGTTAC+AGG | 0.322194 | 7.3:-10371287 | None:intergenic |
| CAATATAAAATAGTATTAAA+AGG | 0.325816 | 7.3:-10369060 | None:intergenic |
| CCTTCACTTGGCACTGTGCT+TGG | 0.346567 | 7.3:-10371428 | None:intergenic |
| GGGGAGGTCAGCAAGGATAA+AGG | 0.362925 | 7.3:+10368841 | MS.gene24628:CDS |
| AATTTGAGCTATCCCATAAC+TGG | 0.378730 | 7.3:+10368974 | MS.gene24628:CDS |
| GCAGATTTACCAGCCTGCTT+AGG | 0.386812 | 7.3:-10371199 | None:intergenic |
| GCTCCCATATTTCCAGTTAT+GGG | 0.386902 | 7.3:-10368986 | None:intergenic |
| TGATGCATTTACAACGGGTT+TGG | 0.397107 | 7.3:-10369460 | None:intergenic |
| TAGTCTCCAGTTACCTTCTT+CGG | 0.410069 | 7.3:-10370417 | None:intergenic |
| AAAGGATATGAATCATGTTC+CGG | 0.414891 | 7.3:-10369042 | None:intergenic |
| TTTGCCTTCTTCACAGGTAC+AGG | 0.429781 | 7.3:-10370539 | None:intergenic |
| TTTAAGACTGAAGATGCCTT+AGG | 0.434410 | 7.3:+10371391 | MS.gene24628:CDS |
| CAGATTTACCAGCCTGCTTA+GGG | 0.438934 | 7.3:-10371198 | None:intergenic |
| ACAGCTGCAAGCCCTGTAAC+AGG | 0.439457 | 7.3:+10371275 | MS.gene24628:CDS |
| CACAGGTACAGGTGTTTCCT+TGG | 0.451744 | 7.3:-10370528 | None:intergenic |
| ATTCCACTTAATGCTGCTAA+TGG | 0.460106 | 7.3:+10369324 | MS.gene24628:CDS |
| GACCATCAAACTTCACATAC+AGG | 0.460737 | 7.3:-10368879 | None:intergenic |
| AACTTCACATACAGGGATAC+CGG | 0.463337 | 7.3:-10368871 | None:intergenic |
| TAATAAGCAGCCAGAGAAGC+AGG | 0.473969 | 7.3:+10371228 | MS.gene24628:CDS |
| GGGAGGTCAGCAAGGATAAA+GGG | 0.482905 | 7.3:+10368842 | MS.gene24628:CDS |
| ATTTAGAATCGAATGCGAAC+CGG | 0.485135 | 7.3:+10369023 | MS.gene24628:CDS |
| TCCCTGTATGTGAAGTTTGA+TGG | 0.494576 | 7.3:+10368877 | MS.gene24628:CDS |
| TATCCCATAACTGGAAATAT+GGG | 0.497848 | 7.3:+10368983 | MS.gene24628:CDS |
| TTACCATTAGCAGCATTAAG+TGG | 0.498727 | 7.3:-10369327 | None:intergenic |
| TTAGGTGTTGAGGTAAAACT+TGG | 0.502777 | 7.3:+10368659 | MS.gene24628:intron |
| CTGTAATCTCCACTAGACTT+TGG | 0.505848 | 7.3:-10371256 | None:intergenic |
| TTACCAGCCTGCTTAGGGTA+AGG | 0.510729 | 7.3:-10371193 | None:intergenic |
| GATGGTCAGAAGCTTCAACT+TGG | 0.513400 | 7.3:+10368895 | MS.gene24628:CDS |
| GGCCTTATTATGAGAACCTA+AGG | 0.516695 | 7.3:-10371407 | None:intergenic |
| AACACCTGTACCTGTGAAGA+AGG | 0.532518 | 7.3:+10370535 | MS.gene24628:CDS |
| GCACCATTCACCTCCAACAC+AGG | 0.534916 | 7.3:-10369438 | None:intergenic |
| TGATACTCCTTACCCTAAGC+AGG | 0.550019 | 7.3:+10371186 | MS.gene24628:CDS |
| CCAAGCACAGTGCCAAGTGA+AGG | 0.555760 | 7.3:+10371428 | MS.gene24628:CDS |
| TTTGTCACTCCAGAGAAGAC+TGG | 0.556582 | 7.3:+10370563 | MS.gene24628:CDS |
| CGAGCTTATCCACATTTCAT+CGG | 0.569171 | 7.3:+10368712 | MS.gene24628:CDS |
| TTTAGATACTGATTCTGAAG+AGG | 0.569513 | 7.3:+10369296 | MS.gene24628:intron |
| CAGTTCAGATTCATCTGATG+AGG | 0.575058 | 7.3:+10369521 | MS.gene24628:CDS |
| TGTAGGGAAACCTGTGTTGG+AGG | 0.575298 | 7.3:+10369428 | MS.gene24628:intron |
| ACTCCTTACCCTAAGCAGGC+TGG | 0.582053 | 7.3:+10371190 | MS.gene24628:CDS |
| AAACCTGTGTTGGAGGTGAA+TGG | 0.584764 | 7.3:+10369435 | MS.gene24628:CDS |
| TTATGTAGGGAAACCTGTGT+TGG | 0.588328 | 7.3:+10369425 | MS.gene24628:intron |
| GTCGTTTAGCTCATGGCGAA+TGG | 0.589514 | 7.3:+10370339 | MS.gene24628:intron |
| AACTCCAATCACCTGTTACA+GGG | 0.600270 | 7.3:-10371286 | None:intergenic |
| CAGGAGACTCCAAAGTCTAG+TGG | 0.603055 | 7.3:+10371247 | MS.gene24628:CDS |
| GAGGGTTGCTGAATCTTCCA+AGG | 0.606410 | 7.3:+10370511 | MS.gene24628:CDS |
| AGACTGAAGGGAGCAACAAG+AGG | 0.612717 | 7.3:+10370492 | MS.gene24628:intron |
| TGAGGATTCTAGTGAAGATG+AGG | 0.614205 | 7.3:+10369539 | MS.gene24628:CDS |
| AAGCATATACCGATGAAATG+TGG | 0.617686 | 7.3:-10368721 | None:intergenic |
| AAAACTTGGTGAATCACTCA+AGG | 0.619144 | 7.3:+10368673 | MS.gene24628:CDS |
| TGATGAGGAGACACCGAAGA+AGG | 0.620434 | 7.3:+10370404 | MS.gene24628:CDS |
| ACTTCACATACAGGGATACC+GGG | 0.620641 | 7.3:-10368870 | None:intergenic |
| GACTGAAGGGAGCAACAAGA+GGG | 0.623418 | 7.3:+10370493 | MS.gene24628:intron |
| ACCATCAAACTTCACATACA+GGG | 0.624265 | 7.3:-10368878 | None:intergenic |
| AAGCGATGAAGATTCTGATG+AGG | 0.625838 | 7.3:+10370389 | MS.gene24628:CDS |
| TATATGACAGGCATGTTTGG+GGG | 0.631765 | 7.3:+10368822 | MS.gene24628:intron |
| TTATATGACAGGCATGTTTG+GGG | 0.632570 | 7.3:+10368821 | MS.gene24628:intron |
| CAAGGATAAAGGGAGTGACC+CGG | 0.634157 | 7.3:+10368852 | MS.gene24628:CDS |
| ACCAAATCAAAAGATGTCTG+AGG | 0.650289 | 7.3:-10368940 | None:intergenic |
| TAGGGTAAGGAGTATCAACG+TGG | 0.788217 | 7.3:-10371180 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATTTAAAATATTTAAT+TGG | - | chr7.3:10370174-10370193 | None:intergenic | 0.0% |
| !! | CAATATAAAATAGTATTAAA+AGG | - | chr7.3:10369063-10369082 | None:intergenic | 10.0% |
| !!! | TATTTTGTTAAATAATAACA+TGG | + | chr7.3:10368504-10368523 | MS.gene24628:intron | 10.0% |
| !! | ATATTTGTACCAAAAATTAA+TGG | + | chr7.3:10369818-10369837 | MS.gene24628:intron | 15.0% |
| !! | CTCAAAATTAAATTCAAATT+CGG | - | chr7.3:10370463-10370482 | None:intergenic | 15.0% |
| !! | TCAATAAAAAATTCAGTAAT+CGG | - | chr7.3:10370275-10370294 | None:intergenic | 15.0% |
| !! | TTAATTTAATGATTGAATCA+GGG | + | chr7.3:10370197-10370216 | MS.gene24628:intron | 15.0% |
| !!! | ATATCTTATTTTATCAATGT+TGG | - | chr7.3:10370715-10370734 | None:intergenic | 15.0% |
| !!! | ATTACTGAATTTTTTATTGA+AGG | + | chr7.3:10370275-10370294 | MS.gene24628:intron | 15.0% |
| !!! | ATTCATATTTTAGTTTGTTT+TGG | + | chr7.3:10370310-10370329 | MS.gene24628:intron | 15.0% |
| !!! | CATATATAACCATTAATTTT+TGG | - | chr7.3:10369830-10369849 | None:intergenic | 15.0% |
| !!! | TGATTTTGTTTTTTTCAAAA+AGG | - | chr7.3:10367463-10367482 | None:intergenic | 15.0% |
| !!! | TGTTTTCTAAAGAAATTTTT+TGG | - | chr7.3:10369799-10369818 | None:intergenic | 15.0% |
| !!! | TTTCAATATATAATGGATAT+TGG | + | chr7.3:10369586-10369605 | MS.gene24628:intron | 15.0% |
| !! | AAAAATGTAAAGTGATAGAA+AGG | - | chr7.3:10367398-10367417 | None:intergenic | 20.0% |
| !! | AAGATAAAAGAATGTAGTTA+AGG | - | chr7.3:10369153-10369172 | None:intergenic | 20.0% |
| !! | AGATAAAAAAAATCCAAAGA+AGG | - | chr7.3:10368591-10368610 | None:intergenic | 20.0% |
| !! | ATACATGCTTAAACAAAATT+AGG | - | chr7.3:10367765-10367784 | None:intergenic | 20.0% |
| !! | ATGAAAAACTGAATAACAAA+TGG | - | chr7.3:10368356-10368375 | None:intergenic | 20.0% |
| !! | GTTAATTTAATGATTGAATC+AGG | + | chr7.3:10370196-10370215 | MS.gene24628:intron | 20.0% |
| !! | TAATTTAATGATTGAATCAG+GGG | + | chr7.3:10370198-10370217 | MS.gene24628:intron | 20.0% |
| !! | TCTTGTTGCTAAATTAATAT+TGG | + | chr7.3:10368608-10368627 | MS.gene24628:intron | 20.0% |
| !! | TTGAATTAAATGAAATGCTA+CGG | + | chr7.3:10369698-10369717 | MS.gene24628:intron | 20.0% |
| !! | TTTCATGTATAAATATCGTT+AGG | + | chr7.3:10367560-10367579 | MS.gene24628:intron | 20.0% |
| !!! | AAGTGGATTTCAATATATAA+TGG | + | chr7.3:10369579-10369598 | MS.gene24628:intron | 20.0% |
| !!! | AATAACATGGTTTTTAAGAT+GGG | + | chr7.3:10368517-10368536 | MS.gene24628:intron | 20.0% |
| !!! | ATAAACTATTCTCAGTTTTA+TGG | - | chr7.3:10368035-10368054 | None:intergenic | 20.0% |
| !!! | ATTGTTCTAAACATTTATGT+AGG | + | chr7.3:10369411-10369430 | MS.gene24628:intron | 20.0% |
| !!! | CGTTAATGTTTTTGTATAAA+TGG | + | chr7.3:10368788-10368807 | MS.gene24628:intron | 20.0% |
| !!! | TAATAACATGGTTTTTAAGA+TGG | + | chr7.3:10368516-10368535 | MS.gene24628:intron | 20.0% |
| !!! | TTGTTATTCAGTTTTTCATT+TGG | + | chr7.3:10368357-10368376 | MS.gene24628:intron | 20.0% |
| !!! | TTGTTCTAAACATTTATGTA+GGG | + | chr7.3:10369412-10369431 | MS.gene24628:intron | 20.0% |
| !!! | TTTGTTTTCTAATTGTACTT+CGG | - | chr7.3:10371038-10371057 | None:intergenic | 20.0% |
| ! | AAAACAGAAAAAGAATCAGA+AGG | + | chr7.3:10369482-10369501 | MS.gene24628:CDS | 25.0% |
| ! | AAAACTAACAAACAAAGTAC+TGG | - | chr7.3:10370601-10370620 | None:intergenic | 25.0% |
| ! | AAAACTGAATAACAAATGGT+AGG | - | chr7.3:10368352-10368371 | None:intergenic | 25.0% |
| ! | AAACTGAATAACAAATGGTA+GGG | - | chr7.3:10368351-10368370 | None:intergenic | 25.0% |
| ! | AATCCACTTTCTAGATTATA+CGG | - | chr7.3:10369568-10369587 | None:intergenic | 25.0% |
| ! | AATTTAATGATTGAATCAGG+GGG | + | chr7.3:10370199-10370218 | MS.gene24628:intron | 25.0% |
| ! | ATATAAAACTCCTTTCATGA+GGG | - | chr7.3:10368473-10368492 | None:intergenic | 25.0% |
| ! | ATTAACAAAGTAGAACTGAA+AGG | + | chr7.3:10371114-10371133 | MS.gene24628:intron | 25.0% |
| ! | CAAAAACATTAACGATTCAA+TGG | - | chr7.3:10368782-10368801 | None:intergenic | 25.0% |
| ! | CAATGTAATAGAAACTAAAG+AGG | - | chr7.3:10368447-10368466 | None:intergenic | 25.0% |
| ! | CTAAAAACTCATTCACATAA+AGG | - | chr7.3:10370025-10370044 | None:intergenic | 25.0% |
| ! | GACAATAGAAATGCATAAAA+TGG | - | chr7.3:10369367-10369386 | None:intergenic | 25.0% |
| ! | GCAATATCAAATTATTTCAG+CGG | + | chr7.3:10368546-10368565 | MS.gene24628:intron | 25.0% |
| ! | TAAAGGAAGTCAAAACAATT+TGG | - | chr7.3:10370008-10370027 | None:intergenic | 25.0% |
| ! | TAATATTGTGTTTCCTTCTT+TGG | + | chr7.3:10368575-10368594 | MS.gene24628:intron | 25.0% |
| ! | TAATGTCATCTAGATGTATA+AGG | + | chr7.3:10370738-10370757 | MS.gene24628:intron | 25.0% |
| ! | TACAGAATATTGTCAAATAG+CGG | - | chr7.3:10367879-10367898 | None:intergenic | 25.0% |
| ! | TACGGAAAAATACAAATGTA+GGG | + | chr7.3:10369716-10369735 | MS.gene24628:intron | 25.0% |
| ! | TTTAATATACGATGTAGACT+TGG | + | chr7.3:10370244-10370263 | MS.gene24628:intron | 25.0% |
| !! | AAACTAACAAACAAAGTACT+GGG | - | chr7.3:10370600-10370619 | None:intergenic | 25.0% |
| !! | ACGAGAATTATGATATTTTC+AGG | + | chr7.3:10371142-10371161 | MS.gene24628:intron | 25.0% |
| !! | TTAGTGACAATTTTGTCTTT+TGG | + | chr7.3:10370977-10370996 | MS.gene24628:intron | 25.0% |
| !!! | ACATCTTTTGATTTGGTTTT+TGG | + | chr7.3:10368946-10368965 | MS.gene24628:CDS | 25.0% |
| !!! | AGAATTATGATATTTTCAGG+TGG | + | chr7.3:10371145-10371164 | MS.gene24628:intron | 25.0% |
| !!! | CATCTTTTGATTTGGTTTTT+GGG | + | chr7.3:10368947-10368966 | MS.gene24628:CDS | 25.0% |
| !!! | TACACAACATTGATTTAAAC+AGG | - | chr7.3:10367797-10367816 | None:intergenic | 25.0% |
| !!! | TGAGAGTTTTATTACACTTT+CGG | + | chr7.3:10368114-10368133 | MS.gene24628:intron | 25.0% |
| !!! | TTGCAGTTTTTGGATAAAAA+TGG | + | chr7.3:10367585-10367604 | MS.gene24628:intron | 25.0% |
| AAAACATTCCTGTGATGATT+CGG | + | chr7.3:10369866-10369885 | MS.gene24628:intron | 30.0% | |
| AAAGGATATGAATCATGTTC+CGG | - | chr7.3:10369045-10369064 | None:intergenic | 30.0% | |
| AACTGAATAACAAATGGTAG+GGG | - | chr7.3:10368350-10368369 | None:intergenic | 30.0% | |
| AATACTAATTGGGTAGAAGA+AGG | + | chr7.3:10369746-10369765 | MS.gene24628:intron | 30.0% | |
| AATGTAAAGTGATAGAAAGG+AGG | - | chr7.3:10367395-10367414 | None:intergenic | 30.0% | |
| ACATTCCTACTTAAAAGTGA+AGG | + | chr7.3:10369962-10369981 | MS.gene24628:intron | 30.0% | |
| ACTTACAAAATAGATGAAGC+TGG | + | chr7.3:10369898-10369917 | MS.gene24628:intron | 30.0% | |
| ATATTAGAACGCATTGTTGT+TGG | - | chr7.3:10369110-10369129 | None:intergenic | 30.0% | |
| CTACGGAAAAATACAAATGT+AGG | + | chr7.3:10369715-10369734 | MS.gene24628:intron | 30.0% | |
| GATATAAAACTCCTTTCATG+AGG | - | chr7.3:10368474-10368493 | None:intergenic | 30.0% | |
| GTCAGAAAATATTTAACACG+TGG | - | chr7.3:10370942-10370961 | None:intergenic | 30.0% | |
| GTCTCAAATCTTTATATGAC+AGG | + | chr7.3:10368810-10368829 | MS.gene24628:intron | 30.0% | |
| TAACCGTATAATCTAGAAAG+TGG | + | chr7.3:10369562-10369581 | MS.gene24628:intron | 30.0% | |
| TATAAAACTCCTTTCATGAG+GGG | - | chr7.3:10368472-10368491 | None:intergenic | 30.0% | |
| TATCCCATAACTGGAAATAT+GGG | + | chr7.3:10368983-10369002 | MS.gene24628:CDS | 30.0% | |
| TGCATAAAATTGCATTGTTG+TGG | + | chr7.3:10370798-10370817 | MS.gene24628:intron | 30.0% | |
| TTATGCAATAACAGTGCAAA+GGG | - | chr7.3:10370785-10370804 | None:intergenic | 30.0% | |
| TTCGACACTAATGTTGTATA+CGG | + | chr7.3:10370663-10370682 | MS.gene24628:intron | 30.0% | |
| TTGTTAAATTGCAACTACAG+CGG | - | chr7.3:10367960-10367979 | None:intergenic | 30.0% | |
| TTTAATTCAATAACTGCAGC+TGG | - | chr7.3:10369688-10369707 | None:intergenic | 30.0% | |
| TTTATATGACAGGCATGTTT+GGG | + | chr7.3:10368820-10368839 | MS.gene24628:intron | 30.0% | |
| TTTATGCAATAACAGTGCAA+AGG | - | chr7.3:10370786-10370805 | None:intergenic | 30.0% | |
| ! | TAAAAATGGTGGAAATGTGA+TGG | + | chr7.3:10367599-10367618 | MS.gene24628:intron | 30.0% |
| ! | TACAACATTAGTGTCGAATA+AGG | - | chr7.3:10370661-10370680 | None:intergenic | 30.0% |
| ! | TCACAAATCACTATCCTTTT+AGG | + | chr7.3:10368641-10368660 | MS.gene24628:intron | 30.0% |
| ! | TGTTTAGAACAATATGACAC+AGG | - | chr7.3:10369404-10369423 | None:intergenic | 30.0% |
| !! | AAACACCTTCACTTTTAAGT+AGG | - | chr7.3:10369970-10369989 | None:intergenic | 30.0% |
| !! | AACTAACAAACAAAGTACTG+GGG | - | chr7.3:10370599-10370618 | None:intergenic | 30.0% |
| !! | CAGTTTTTGGATAAAAATGG+TGG | + | chr7.3:10367588-10367607 | MS.gene24628:intron | 30.0% |
| !! | GAAAGGAGTTTTATATCACT+GGG | + | chr7.3:10368477-10368496 | MS.gene24628:intron | 30.0% |
| !! | TGAAAGGAGTTTTATATCAC+TGG | + | chr7.3:10368476-10368495 | MS.gene24628:intron | 30.0% |
| !! | TTTAGATACTGATTCTGAAG+AGG | + | chr7.3:10369296-10369315 | MS.gene24628:intron | 30.0% |
| !!! | AGAGTTTTATTACACTTTCG+GGG | + | chr7.3:10368116-10368135 | MS.gene24628:intron | 30.0% |
| !!! | CACAATTTTATTTTGACTGC+AGG | + | chr7.3:10371365-10371384 | MS.gene24628:intron | 30.0% |
| !!! | CTGTTTTGATGCATTTACAA+CGG | - | chr7.3:10369469-10369488 | None:intergenic | 30.0% |
| !!! | GAGAGTTTTATTACACTTTC+GGG | + | chr7.3:10368115-10368134 | MS.gene24628:intron | 30.0% |
| !!! | GAGTTTTGTTTTAGACTGAA+GGG | + | chr7.3:10370480-10370499 | MS.gene24628:intron | 30.0% |
| !!! | TGAGTTTTGTTTTAGACTGA+AGG | + | chr7.3:10370479-10370498 | MS.gene24628:intron | 30.0% |
| !!! | TGTTTTGATGCATTTACAAC+GGG | - | chr7.3:10369468-10369487 | None:intergenic | 30.0% |
| AAAAACTAACCAGTCTTCTC+TGG | - | chr7.3:10370575-10370594 | None:intergenic | 35.0% | |
| AAAATACAAATGTAGGGCAC+TGG | + | chr7.3:10369722-10369741 | MS.gene24628:intron | 35.0% | |
| AAACATTCCTGTGATGATTC+GGG | + | chr7.3:10369867-10369886 | MS.gene24628:intron | 35.0% | |
| AACTACTTTGTGACTTATGC+TGG | + | chr7.3:10370891-10370910 | MS.gene24628:intron | 35.0% | |
| AAGCATATACCGATGAAATG+TGG | - | chr7.3:10368724-10368743 | None:intergenic | 35.0% | |
| AATTTGAGCTATCCCATAAC+TGG | + | chr7.3:10368974-10368993 | MS.gene24628:CDS | 35.0% | |
| ACAAAATAGATGAAGCTGGT+CGG | + | chr7.3:10369902-10369921 | MS.gene24628:intron | 35.0% | |
| ACAGGATTATGAGGACAATT+TGG | - | chr7.3:10370105-10370124 | None:intergenic | 35.0% | |
| ACCAAATCAAAAGATGTCTG+AGG | - | chr7.3:10368943-10368962 | None:intergenic | 35.0% | |
| ACCATCAAACTTCACATACA+GGG | - | chr7.3:10368881-10368900 | None:intergenic | 35.0% | |
| ACCATGAAAACAGGATTATG+AGG | - | chr7.3:10370114-10370133 | None:intergenic | 35.0% | |
| AGATGTATAAGGTTTGACAG+TGG | + | chr7.3:10370749-10370768 | MS.gene24628:intron | 35.0% | |
| AGTTCCTAGAATCATCTTGA+AGG | + | chr7.3:10368084-10368103 | MS.gene24628:intron | 35.0% | |
| ATTCCACTTAATGCTGCTAA+TGG | + | chr7.3:10369324-10369343 | MS.gene24628:CDS | 35.0% | |
| CATCGAACAACTTTGTGTAT+CGG | - | chr7.3:10369654-10369673 | None:intergenic | 35.0% | |
| CGTGAGGATGATGATAATTA+GGG | - | chr7.3:10367658-10367677 | None:intergenic | 35.0% | |
| CTAAAGCACAAAATGTTCTG+TGG | - | chr7.3:10367687-10367706 | None:intergenic | 35.0% | |
| CTATCCCATAACTGGAAATA+TGG | + | chr7.3:10368982-10369001 | MS.gene24628:CDS | 35.0% | |
| CTTTATATGACAGGCATGTT+TGG | + | chr7.3:10368819-10368838 | MS.gene24628:intron | 35.0% | |
| GATAAGAGTTATCAACTCTG+TGG | + | chr7.3:10370147-10370166 | MS.gene24628:intron | 35.0% | |
| GTTCCTAGAATCATCTTGAA+GGG | + | chr7.3:10368085-10368104 | MS.gene24628:intron | 35.0% | |
| TAAGTGTGTATAGAACGATG+AGG | - | chr7.3:10371337-10371356 | None:intergenic | 35.0% | |
| TAGAAGAAGGTAGGAATACT+TGG | + | chr7.3:10369759-10369778 | MS.gene24628:intron | 35.0% | |
| TCGTGAGGATGATGATAATT+AGG | - | chr7.3:10367659-10367678 | None:intergenic | 35.0% | |
| TGATAGAAAGGAGGAAGAAA+CGG | - | chr7.3:10367386-10367405 | None:intergenic | 35.0% | |
| TGCCTTAGGTTCTCATAATA+AGG | + | chr7.3:10371405-10371424 | MS.gene24628:CDS | 35.0% | |
| TGGATTGTTAAAATTCCGCT+AGG | + | chr7.3:10367828-10367847 | MS.gene24628:intron | 35.0% | |
| TGTTGTGTAATTGCAGTTAG+TGG | + | chr7.3:10367808-10367827 | MS.gene24628:intron | 35.0% | |
| TTACCATTAGCAGCATTAAG+TGG | - | chr7.3:10369330-10369349 | None:intergenic | 35.0% | |
| TTATATGACAGGCATGTTTG+GGG | + | chr7.3:10368821-10368840 | MS.gene24628:intron | 35.0% | |
| ! | AAAACTTGGTGAATCACTCA+AGG | + | chr7.3:10368673-10368692 | MS.gene24628:CDS | 35.0% |
| ! | ACAAATTTTGCCTTCTTCAC+AGG | - | chr7.3:10370548-10370567 | None:intergenic | 35.0% |
| ! | ATTAGTGTCGAATAAGGCTT+AGG | - | chr7.3:10370655-10370674 | None:intergenic | 35.0% |
| ! | ATTTAGAATCGAATGCGAAC+CGG | + | chr7.3:10369023-10369042 | MS.gene24628:CDS | 35.0% |
| ! | CACAGAACATTTTGTGCTTT+AGG | + | chr7.3:10367685-10367704 | MS.gene24628:intron | 35.0% |
| ! | CATAATCCTGTTTTCATGGT+CGG | + | chr7.3:10370114-10370133 | MS.gene24628:intron | 35.0% |
| ! | GTTTTACCTCAACACCTAAA+AGG | - | chr7.3:10368658-10368677 | None:intergenic | 35.0% |
| ! | TCCTCATAATCCTGTTTTCA+TGG | + | chr7.3:10370110-10370129 | MS.gene24628:intron | 35.0% |
| ! | TCGTTAGGTTTTGCAGTTTT+TGG | + | chr7.3:10367575-10367594 | MS.gene24628:intron | 35.0% |
| ! | TTAGTGTCGAATAAGGCTTA+GGG | - | chr7.3:10370654-10370673 | None:intergenic | 35.0% |
| ! | TTTAAGACTGAAGATGCCTT+AGG | + | chr7.3:10371391-10371410 | MS.gene24628:CDS | 35.0% |
| !! | TCCTCAGACATCTTTTGATT+TGG | + | chr7.3:10368939-10368958 | MS.gene24628:CDS | 35.0% |
| !! | TTAGGTGTTGAGGTAAAACT+TGG | + | chr7.3:10368659-10368678 | MS.gene24628:intron | 35.0% |
| !!! | CGTTGTTTTGGACCTATAAA+AGG | + | chr7.3:10368141-10368160 | MS.gene24628:intron | 35.0% |
| !!! | TTATGATATTTTCAGGTGGC+AGG | + | chr7.3:10371149-10371168 | MS.gene24628:intron | 35.0% |
| AAAGTGGTGAGAGAACATTG+TGG | - | chr7.3:10370837-10370856 | None:intergenic | 40.0% | |
| AACTCCAATCACCTGTTACA+GGG | - | chr7.3:10371289-10371308 | None:intergenic | 40.0% | |
| AACTTCACATACAGGGATAC+CGG | - | chr7.3:10368874-10368893 | None:intergenic | 40.0% | |
| AAGCGATGAAGATTCTGATG+AGG | + | chr7.3:10370389-10370408 | MS.gene24628:CDS | 40.0% | |
| AAGTGGTGAGAGAACATTGT+GGG | - | chr7.3:10370836-10370855 | None:intergenic | 40.0% | |
| ACAAATTAACGAGTCCAACG+AGG | - | chr7.3:10371080-10371099 | None:intergenic | 40.0% | |
| ACCTATAAAAGGTCACTGGT+TGG | + | chr7.3:10368152-10368171 | MS.gene24628:intron | 40.0% | |
| AGTCCCTTCAAGATGATTCT+AGG | - | chr7.3:10368091-10368110 | None:intergenic | 40.0% | |
| AGTGAAGATGAAGCTTCTGA+TGG | + | chr7.3:10369178-10369197 | MS.gene24628:intron | 40.0% | |
| AGTGAATCGCAGAGTAATAG+TGG | + | chr7.3:10367908-10367927 | MS.gene24628:intron | 40.0% | |
| ATGGAGCAGCTATTGCTTTA+TGG | + | chr7.3:10370865-10370884 | MS.gene24628:intron | 40.0% | |
| CAGTTCAGATTCATCTGATG+AGG | + | chr7.3:10369521-10369540 | MS.gene24628:CDS | 40.0% | |
| CGAGCTTATCCACATTTCAT+CGG | + | chr7.3:10368712-10368731 | MS.gene24628:CDS | 40.0% | |
| CGATACACAAAGTTGTTCGA+TGG | + | chr7.3:10369652-10369671 | MS.gene24628:intron | 40.0% | |
| CTAATTGGGTAGAAGAAGGT+AGG | + | chr7.3:10369750-10369769 | MS.gene24628:intron | 40.0% | |
| CTGTAATCTCCACTAGACTT+TGG | - | chr7.3:10371259-10371278 | None:intergenic | 40.0% | |
| GACCATCAAACTTCACATAC+AGG | - | chr7.3:10368882-10368901 | None:intergenic | 40.0% | |
| GAGACATGAGGATCTAATAG+AGG | - | chr7.3:10368204-10368223 | None:intergenic | 40.0% | |
| GAGGTTGAAAAAGACAGAAG+AGG | - | chr7.3:10368428-10368447 | None:intergenic | 40.0% | |
| GCTCCCATATTTCCAGTTAT+GGG | - | chr7.3:10368989-10369008 | None:intergenic | 40.0% | |
| GTCCAACGAGGTTAAACTAT+CGG | - | chr7.3:10371068-10371087 | None:intergenic | 40.0% | |
| GTTACAAAGTCAGAGACATG+AGG | - | chr7.3:10368216-10368235 | None:intergenic | 40.0% | |
| TACATTGTACCCCTCATGAA+AGG | + | chr7.3:10368460-10368479 | MS.gene24628:intron | 40.0% | |
| TAGTCTCCAGTTACCTTCTT+CGG | - | chr7.3:10370420-10370439 | None:intergenic | 40.0% | |
| TATATGACAGGCATGTTTGG+GGG | + | chr7.3:10368822-10368841 | MS.gene24628:intron | 40.0% | |
| TCCCTGTATGTGAAGTTTGA+TGG | + | chr7.3:10368877-10368896 | MS.gene24628:CDS | 40.0% | |
| TGAGGATTCTAGTGAAGATG+AGG | + | chr7.3:10369539-10369558 | MS.gene24628:CDS | 40.0% | |
| TTATGTAGGGAAACCTGTGT+TGG | + | chr7.3:10369425-10369444 | MS.gene24628:intron | 40.0% | |
| TTGGACCTATAAAAGGTCAC+TGG | + | chr7.3:10368148-10368167 | MS.gene24628:intron | 40.0% | |
| TTGTCAAATAGCGGCTATAC+TGG | - | chr7.3:10367870-10367889 | None:intergenic | 40.0% | |
| ! | TAGTGTCGAATAAGGCTTAG+GGG | - | chr7.3:10370653-10370672 | None:intergenic | 40.0% |
| ! | TCCAACCAGTGACCTTTTAT+AGG | - | chr7.3:10368156-10368175 | None:intergenic | 40.0% |
| ! | TGATGCATTTACAACGGGTT+TGG | - | chr7.3:10369463-10369482 | None:intergenic | 40.0% |
| !! | AGGGCACTGGTAATACTAAT+TGG | + | chr7.3:10369735-10369754 | MS.gene24628:intron | 40.0% |
| !! | ATCGCAGAATTGGCTTGTAA+AGG | + | chr7.3:10368175-10368194 | MS.gene24628:intron | 40.0% |
| !! | CACTATCCTTTTAGGTGTTG+AGG | + | chr7.3:10368649-10368668 | MS.gene24628:intron | 40.0% |
| !! | CATTTTGTGCTTTAGGTCAC+TGG | + | chr7.3:10367692-10367711 | MS.gene24628:intron | 40.0% |
| !! | GGCCTTATTATGAGAACCTA+AGG | - | chr7.3:10371410-10371429 | None:intergenic | 40.0% |
| !! | GGGCACTGGTAATACTAATT+GGG | + | chr7.3:10369736-10369755 | MS.gene24628:intron | 40.0% |
| !! | GTAATGTGTCGTTTAGCTCA+TGG | + | chr7.3:10370332-10370351 | MS.gene24628:intron | 40.0% |
| !! | GTATCGGCACAACATCTTTT+TGG | - | chr7.3:10369638-10369657 | None:intergenic | 40.0% |
| !! | TGGATAAGCTCGCTATTTTC+TGG | - | chr7.3:10368704-10368723 | None:intergenic | 40.0% |
| AAACCTGTGTTGGAGGTGAA+TGG | + | chr7.3:10369435-10369454 | MS.gene24628:CDS | 45.0% | |
| AACACCTGTACCTGTGAAGA+AGG | + | chr7.3:10370535-10370554 | MS.gene24628:CDS | 45.0% | |
| ACTTCACATACAGGGATACC+GGG | - | chr7.3:10368873-10368892 | None:intergenic | 45.0% | |
| AGTGGTGAGAGAACATTGTG+GGG | - | chr7.3:10370835-10370854 | None:intergenic | 45.0% | |
| CAACTCCAATCACCTGTTAC+AGG | - | chr7.3:10371290-10371309 | None:intergenic | 45.0% | |
| CAGATTTACCAGCCTGCTTA+GGG | - | chr7.3:10371201-10371220 | None:intergenic | 45.0% | |
| CGCTCCCATATTTCCAGTTA+TGG | - | chr7.3:10368990-10369009 | None:intergenic | 45.0% | |
| CTCACCACTTTGCCTATTCA+TGG | + | chr7.3:10370846-10370865 | MS.gene24628:intron | 45.0% | |
| GACCGATAGTTTAACCTCGT+TGG | + | chr7.3:10371063-10371082 | MS.gene24628:intron | 45.0% | |
| GATGGTCAGAAGCTTCAACT+TGG | + | chr7.3:10368895-10368914 | MS.gene24628:CDS | 45.0% | |
| GCAATAGCTGCTCCATGAAT+AGG | - | chr7.3:10370861-10370880 | None:intergenic | 45.0% | |
| GGTACTAATGCTGCTCATCT+TGG | + | chr7.3:10370684-10370703 | MS.gene24628:intron | 45.0% | |
| GTGTGTATAGAACGATGAGG+AGG | - | chr7.3:10371334-10371353 | None:intergenic | 45.0% | |
| TAATAAGCAGCCAGAGAAGC+AGG | + | chr7.3:10371228-10371247 | MS.gene24628:CDS | 45.0% | |
| TCATGACCGACCATGAAAAC+AGG | - | chr7.3:10370123-10370142 | None:intergenic | 45.0% | |
| TCTGTAACACTACAGCCTAG+CGG | - | chr7.3:10367846-10367865 | None:intergenic | 45.0% | |
| TGATACTCCTTACCCTAAGC+AGG | + | chr7.3:10371186-10371205 | MS.gene24628:CDS | 45.0% | |
| TGCTCCATGAATAGGCAAAG+TGG | - | chr7.3:10370853-10370872 | None:intergenic | 45.0% | |
| TGTATAGAACGATGAGGAGG+AGG | - | chr7.3:10371331-10371350 | None:intergenic | 45.0% | |
| TTTGCCTTCTTCACAGGTAC+AGG | - | chr7.3:10370542-10370561 | None:intergenic | 45.0% | |
| TTTGTCACTCCAGAGAAGAC+TGG | + | chr7.3:10370563-10370582 | MS.gene24628:CDS | 45.0% | |
| ! | ACTTTCGGGGATCGTTGTTT+TGG | + | chr7.3:10368129-10368148 | MS.gene24628:intron | 45.0% |
| ! | GGCACTATCATAGCGGAATT+TGG | - | chr7.3:10367939-10367958 | None:intergenic | 45.0% |
| ! | TGTTCTGTGGAGTTTTCGTG+AGG | - | chr7.3:10367674-10367693 | None:intergenic | 45.0% |
| !! | TAGGGTAAGGAGTATCAACG+TGG | - | chr7.3:10371183-10371202 | None:intergenic | 45.0% |
| !!! | TATGGGAGCGTCTTCTTTTC+TGG | + | chr7.3:10369000-10369019 | MS.gene24628:CDS | 45.0% |
| AGACTGAAGGGAGCAACAAG+AGG | + | chr7.3:10370492-10370511 | MS.gene24628:intron | 50.0% | |
| AGGGGGCTATTGTGTCTTAG+TGG | + | chr7.3:10370216-10370235 | MS.gene24628:intron | 50.0% | |
| ATTGCCACCCGAATCATCAC+AGG | - | chr7.3:10369877-10369896 | None:intergenic | 50.0% | |
| CAAGCCCTGTAACAGGTGAT+TGG | + | chr7.3:10371282-10371301 | MS.gene24628:intron | 50.0% | |
| CAAGGATAAAGGGAGTGACC+CGG | + | chr7.3:10368852-10368871 | MS.gene24628:CDS | 50.0% | |
| CACAGGTACAGGTGTTTCCT+TGG | - | chr7.3:10370531-10370550 | None:intergenic | 50.0% | |
| CAGGAGACTCCAAAGTCTAG+TGG | + | chr7.3:10371247-10371266 | MS.gene24628:CDS | 50.0% | |
| CTACAGCGGCACTATCATAG+CGG | - | chr7.3:10367946-10367965 | None:intergenic | 50.0% | |
| GACTGAAGGGAGCAACAAGA+GGG | + | chr7.3:10370493-10370512 | MS.gene24628:intron | 50.0% | |
| GAGACACCGAAGAAGGTAAC+TGG | + | chr7.3:10370411-10370430 | MS.gene24628:intron | 50.0% | |
| GAGGGTTGCTGAATCTTCCA+AGG | + | chr7.3:10370511-10370530 | MS.gene24628:CDS | 50.0% | |
| GCAGATTTACCAGCCTGCTT+AGG | - | chr7.3:10371202-10371221 | None:intergenic | 50.0% | |
| GGGAGGTCAGCAAGGATAAA+GGG | + | chr7.3:10368842-10368861 | MS.gene24628:CDS | 50.0% | |
| TGATGAGGAGACACCGAAGA+AGG | + | chr7.3:10370404-10370423 | MS.gene24628:CDS | 50.0% | |
| TGTAGGGAAACCTGTGTTGG+AGG | + | chr7.3:10369428-10369447 | MS.gene24628:intron | 50.0% | |
| TTACCAGCCTGCTTAGGGTA+AGG | - | chr7.3:10371196-10371215 | None:intergenic | 50.0% | |
| ! | CACTGGTTGGATCGCAGAAT+TGG | + | chr7.3:10368165-10368184 | MS.gene24628:intron | 50.0% |
| ! | CATTCCTGTGATGATTCGGG+TGG | + | chr7.3:10369870-10369889 | MS.gene24628:intron | 50.0% |
| ! | GTCGTTTAGCTCATGGCGAA+TGG | + | chr7.3:10370339-10370358 | MS.gene24628:intron | 50.0% |
| ! | TTTGGAGTCTCCTGCTTCTC+TGG | - | chr7.3:10371241-10371260 | None:intergenic | 50.0% |
| ACAGCTGCAAGCCCTGTAAC+AGG | + | chr7.3:10371275-10371294 | MS.gene24628:CDS | 55.0% | |
| ACTCCTTACCCTAAGCAGGC+TGG | + | chr7.3:10371190-10371209 | MS.gene24628:CDS | 55.0% | |
| ATGACAGGCATGTTTGGGGG+AGG | + | chr7.3:10368825-10368844 | MS.gene24628:intron | 55.0% | |
| ATGTTTGGGGGAGGTCAGCA+AGG | + | chr7.3:10368834-10368853 | MS.gene24628:CDS | 55.0% | |
| GCACCATTCACCTCCAACAC+AGG | - | chr7.3:10369441-10369460 | None:intergenic | 55.0% | |
| GGGGAGGTCAGCAAGGATAA+AGG | + | chr7.3:10368841-10368860 | MS.gene24628:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 10367364 | 10371447 | 10367364 | ID=MS.gene24628 |
| chr7.3 | mRNA | 10367364 | 10371447 | 10367364 | ID=MS.gene24628.t1;Parent=MS.gene24628 |
| chr7.3 | exon | 10367364 | 10367376 | 10367364 | ID=MS.gene24628.t1.exon1;Parent=MS.gene24628.t1 |
| chr7.3 | CDS | 10367364 | 10367376 | 10367364 | ID=cds.MS.gene24628.t1;Parent=MS.gene24628.t1 |
| chr7.3 | exon | 10368663 | 10368733 | 10368663 | ID=MS.gene24628.t1.exon2;Parent=MS.gene24628.t1 |
| chr7.3 | CDS | 10368663 | 10368733 | 10368663 | ID=cds.MS.gene24628.t1;Parent=MS.gene24628.t1 |
| chr7.3 | exon | 10368832 | 10369081 | 10368832 | ID=MS.gene24628.t1.exon3;Parent=MS.gene24628.t1 |
| chr7.3 | CDS | 10368832 | 10369081 | 10368832 | ID=cds.MS.gene24628.t1;Parent=MS.gene24628.t1 |
| chr7.3 | exon | 10369301 | 10369345 | 10369301 | ID=MS.gene24628.t1.exon4;Parent=MS.gene24628.t1 |
| chr7.3 | CDS | 10369301 | 10369345 | 10369301 | ID=cds.MS.gene24628.t1;Parent=MS.gene24628.t1 |
| chr7.3 | exon | 10369433 | 10369560 | 10369433 | ID=MS.gene24628.t1.exon5;Parent=MS.gene24628.t1 |
| chr7.3 | CDS | 10369433 | 10369560 | 10369433 | ID=cds.MS.gene24628.t1;Parent=MS.gene24628.t1 |
| chr7.3 | exon | 10370348 | 10370425 | 10370348 | ID=MS.gene24628.t1.exon6;Parent=MS.gene24628.t1 |
| chr7.3 | CDS | 10370348 | 10370425 | 10370348 | ID=cds.MS.gene24628.t1;Parent=MS.gene24628.t1 |
| chr7.3 | exon | 10370494 | 10370584 | 10370494 | ID=MS.gene24628.t1.exon7;Parent=MS.gene24628.t1 |
| chr7.3 | CDS | 10370494 | 10370584 | 10370494 | ID=cds.MS.gene24628.t1;Parent=MS.gene24628.t1 |
| chr7.3 | exon | 10371164 | 10371296 | 10371164 | ID=MS.gene24628.t1.exon8;Parent=MS.gene24628.t1 |
| chr7.3 | CDS | 10371164 | 10371296 | 10371164 | ID=cds.MS.gene24628.t1;Parent=MS.gene24628.t1 |
| chr7.3 | exon | 10371387 | 10371447 | 10371387 | ID=MS.gene24628.t1.exon9;Parent=MS.gene24628.t1 |
| chr7.3 | CDS | 10371387 | 10371447 | 10371387 | ID=cds.MS.gene24628.t1;Parent=MS.gene24628.t1 |
| Gene Sequence |
| Protein sequence |
