Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061980.t1 | XP_013451570.1 | 95.2 | 62 | 3 | 0 | 356 | 417 | 356 | 417 | 1.60E-19 | 107.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061980.t1 | A0A072U911 | 95.2 | 62 | 3 | 0 | 356 | 417 | 356 | 417 | 1.1e-19 | 107.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene061980 | 0.837954 | 3.83E-57 | -1.69E-46 |
| MS.gene049159 | MS.gene061980 | 0.843238 | 1.58E-58 | -1.69E-46 |
| MS.gene04918 | MS.gene061980 | 0.803937 | 2.75E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene061980 | 0.838459 | 2.84E-57 | -1.69E-46 |
| MS.gene049343 | MS.gene061980 | 0.827484 | 1.53E-54 | -1.69E-46 |
| MS.gene049350 | MS.gene061980 | 0.804804 | 1.81E-49 | -1.69E-46 |
| MS.gene049368 | MS.gene061980 | 0.847031 | 1.50E-59 | -1.69E-46 |
| MS.gene049452 | MS.gene061980 | 0.82389 | 1.09E-53 | -1.69E-46 |
| MS.gene049499 | MS.gene061980 | 0.82308 | 1.68E-53 | -1.69E-46 |
| MS.gene049808 | MS.gene061980 | 0.806886 | 6.61E-50 | -1.69E-46 |
| MS.gene049825 | MS.gene061980 | 0.804356 | 2.25E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene061980 | 0.845449 | 4.03E-59 | -1.69E-46 |
| MS.gene049873 | MS.gene061980 | 0.8081 | 3.66E-50 | -1.69E-46 |
| MS.gene049977 | MS.gene061980 | 0.807486 | 4.94E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene061980 | 0.845155 | 4.84E-59 | -1.69E-46 |
| MS.gene050026 | MS.gene061980 | 0.820009 | 8.60E-53 | -1.69E-46 |
| MS.gene050559 | MS.gene061980 | 0.831262 | 1.84E-55 | -1.69E-46 |
| MS.gene050561 | MS.gene061980 | 0.830691 | 2.55E-55 | -1.69E-46 |
| MS.gene050562 | MS.gene061980 | 0.818112 | 2.32E-52 | -1.69E-46 |
| MS.gene050689 | MS.gene061980 | 0.812695 | 3.72E-51 | -1.69E-46 |
| MS.gene050759 | MS.gene061980 | 0.813058 | 3.10E-51 | -1.69E-46 |
| MS.gene050799 | MS.gene061980 | 0.819656 | 1.04E-52 | -1.69E-46 |
| MS.gene050962 | MS.gene061980 | 0.802614 | 5.16E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene061980 | 0.809814 | 1.57E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene061980 | 0.808683 | 2.75E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene061980 | 0.838134 | 3.44E-57 | -1.69E-46 |
| MS.gene051328 | MS.gene061980 | 0.804857 | 1.77E-49 | -1.69E-46 |
| MS.gene051332 | MS.gene061980 | 0.805172 | 1.52E-49 | -1.69E-46 |
| MS.gene051363 | MS.gene061980 | 0.801186 | 1.01E-48 | -1.69E-46 |
| MS.gene051719 | MS.gene061980 | 0.814001 | 1.92E-51 | -1.69E-46 |
| MS.gene051720 | MS.gene061980 | 0.811511 | 6.75E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene061980 | 0.82537 | 4.86E-54 | -1.69E-46 |
| MS.gene051957 | MS.gene061980 | 0.803106 | 4.08E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene061980 | 0.825332 | 4.97E-54 | -1.69E-46 |
| MS.gene052516 | MS.gene061980 | 0.822213 | 2.67E-53 | -1.69E-46 |
| MS.gene052518 | MS.gene061980 | 0.813712 | 2.23E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene061980 | 0.871027 | 9.34E-67 | -1.69E-46 |
| MS.gene052582 | MS.gene061980 | 0.832783 | 7.76E-56 | -1.69E-46 |
| MS.gene052584 | MS.gene061980 | 0.83417 | 3.50E-56 | -1.69E-46 |
| MS.gene052611 | MS.gene061980 | 0.800474 | 1.42E-48 | -1.69E-46 |
| MS.gene052773 | MS.gene061980 | 0.83537 | 1.75E-56 | -1.69E-46 |
| MS.gene052863 | MS.gene061980 | 0.844123 | 9.18E-59 | -1.69E-46 |
| MS.gene053006 | MS.gene061980 | 0.809124 | 2.21E-50 | -1.69E-46 |
| MS.gene053008 | MS.gene061980 | 0.824007 | 1.02E-53 | -1.69E-46 |
| MS.gene053079 | MS.gene061980 | 0.819923 | 9.00E-53 | -1.69E-46 |
| MS.gene05308 | MS.gene061980 | 0.821465 | 3.98E-53 | -1.69E-46 |
| MS.gene053146 | MS.gene061980 | 0.810743 | 9.90E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene061980 | 0.849805 | 2.55E-60 | -1.69E-46 |
| MS.gene05350 | MS.gene061980 | 0.822031 | 2.94E-53 | -1.69E-46 |
| MS.gene05364 | MS.gene061980 | 0.828697 | 7.78E-55 | -1.69E-46 |
| MS.gene053931 | MS.gene061980 | 0.807415 | 5.11E-50 | -1.69E-46 |
| MS.gene05414 | MS.gene061980 | 0.801962 | 7.03E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene061980 | 0.833356 | 5.59E-56 | -1.69E-46 |
| MS.gene054236 | MS.gene061980 | 0.825951 | 3.54E-54 | -1.69E-46 |
| MS.gene05423 | MS.gene061980 | 0.838572 | 2.66E-57 | -1.69E-46 |
| MS.gene054472 | MS.gene061980 | 0.80088 | 1.17E-48 | -1.69E-46 |
| MS.gene054479 | MS.gene061980 | 0.802595 | 5.21E-49 | -1.69E-46 |
| MS.gene054582 | MS.gene061980 | 0.815102 | 1.10E-51 | -1.69E-46 |
| MS.gene05458 | MS.gene061980 | 0.838396 | 2.95E-57 | -1.69E-46 |
| MS.gene054651 | MS.gene061980 | 0.871055 | 9.15E-67 | -1.69E-46 |
| MS.gene054775 | MS.gene061980 | 0.815352 | 9.66E-52 | -1.69E-46 |
| MS.gene054991 | MS.gene061980 | 0.802693 | 4.97E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene061980 | 0.801355 | 9.37E-49 | -1.69E-46 |
| MS.gene055166 | MS.gene061980 | 0.807986 | 3.87E-50 | -1.69E-46 |
| MS.gene05517 | MS.gene061980 | 0.820308 | 7.35E-53 | -1.69E-46 |
| MS.gene055227 | MS.gene061980 | 0.809506 | 1.83E-50 | -1.69E-46 |
| MS.gene055228 | MS.gene061980 | 0.808587 | 2.88E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene061980 | 0.816781 | 4.63E-52 | -1.69E-46 |
| MS.gene055466 | MS.gene061980 | 0.837342 | 5.50E-57 | -1.69E-46 |
| MS.gene055468 | MS.gene061980 | 0.811164 | 8.03E-51 | -1.69E-46 |
| MS.gene055512 | MS.gene061980 | 0.805599 | 1.23E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene061980 | 0.827958 | 1.17E-54 | -1.69E-46 |
| MS.gene055586 | MS.gene061980 | 0.803346 | 3.64E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene061980 | 0.813444 | 2.55E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene061980 | 0.846529 | 2.05E-59 | -1.69E-46 |
| MS.gene055841 | MS.gene061980 | 0.806066 | 9.85E-50 | -1.69E-46 |
| MS.gene055926 | MS.gene061980 | 0.803157 | 3.99E-49 | -1.69E-46 |
| MS.gene056162 | MS.gene061980 | 0.807373 | 5.22E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene061980 | 0.819677 | 1.02E-52 | -1.69E-46 |
| MS.gene056215 | MS.gene061980 | 0.813064 | 3.09E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene061980 | 0.801684 | 8.02E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene061980 | 0.825618 | 4.25E-54 | -1.69E-46 |
| MS.gene056595 | MS.gene061980 | 0.833477 | 5.22E-56 | -1.69E-46 |
| MS.gene056776 | MS.gene061980 | 0.813147 | 2.97E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene061980 | 0.842412 | 2.63E-58 | -1.69E-46 |
| MS.gene05690 | MS.gene061980 | 0.842885 | 1.97E-58 | -1.69E-46 |
| MS.gene057034 | MS.gene061980 | 0.804693 | 1.91E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene061980 | 0.819532 | 1.11E-52 | -1.69E-46 |
| MS.gene057208 | MS.gene061980 | 0.865921 | 4.16E-65 | -1.69E-46 |
| MS.gene057294 | MS.gene061980 | 0.815384 | 9.51E-52 | -1.69E-46 |
| MS.gene057444 | MS.gene061980 | 0.820022 | 8.54E-53 | -1.69E-46 |
| MS.gene057598 | MS.gene061980 | 0.841249 | 5.33E-58 | -1.69E-46 |
| MS.gene057693 | MS.gene061980 | 0.825438 | 4.69E-54 | -1.69E-46 |
| MS.gene057855 | MS.gene061980 | 0.817098 | 3.93E-52 | -1.69E-46 |
| MS.gene057915 | MS.gene061980 | 0.833664 | 4.68E-56 | -1.69E-46 |
| MS.gene057921 | MS.gene061980 | 0.802857 | 4.60E-49 | -1.69E-46 |
| MS.gene058008 | MS.gene061980 | 0.839691 | 1.36E-57 | -1.69E-46 |
| MS.gene058009 | MS.gene061980 | 0.86267 | 4.30E-64 | -1.69E-46 |
| MS.gene058010 | MS.gene061980 | 0.825677 | 4.11E-54 | -1.69E-46 |
| MS.gene058037 | MS.gene061980 | 0.838436 | 2.88E-57 | -1.69E-46 |
| MS.gene058625 | MS.gene061980 | 0.866366 | 3.00E-65 | -1.69E-46 |
| MS.gene058781 | MS.gene061980 | 0.827971 | 1.16E-54 | -1.69E-46 |
| MS.gene058783 | MS.gene061980 | 0.853299 | 2.62E-61 | -1.69E-46 |
| MS.gene058979 | MS.gene061980 | 0.861081 | 1.32E-63 | -1.69E-46 |
| MS.gene059272 | MS.gene061980 | 0.812825 | 3.49E-51 | -1.69E-46 |
| MS.gene059283 | MS.gene061980 | 0.803215 | 3.88E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene061980 | 0.80233 | 5.90E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene061980 | 0.839557 | 1.48E-57 | -1.69E-46 |
| MS.gene059842 | MS.gene061980 | 0.854337 | 1.32E-61 | -1.69E-46 |
| MS.gene05985 | MS.gene061980 | -0.800153 | 1.65E-48 | -1.69E-46 |
| MS.gene060011 | MS.gene061980 | 0.804804 | 1.81E-49 | -1.69E-46 |
| MS.gene060310 | MS.gene061980 | 0.816176 | 6.33E-52 | -1.69E-46 |
| MS.gene060322 | MS.gene061980 | 0.810006 | 1.43E-50 | -1.69E-46 |
| MS.gene060435 | MS.gene061980 | 0.810139 | 1.34E-50 | -1.69E-46 |
| MS.gene060521 | MS.gene061980 | 0.805948 | 1.04E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene061980 | 0.819784 | 9.68E-53 | -1.69E-46 |
| MS.gene060572 | MS.gene061980 | 0.80428 | 2.33E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene061980 | 0.803371 | 3.60E-49 | -1.69E-46 |
| MS.gene060689 | MS.gene061980 | 0.801808 | 7.56E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene061980 | 0.801545 | 8.56E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene061980 | 0.862181 | 6.08E-64 | -1.69E-46 |
| MS.gene060937 | MS.gene061980 | 0.850259 | 1.91E-60 | -1.69E-46 |
| MS.gene061100 | MS.gene061980 | 0.812435 | 4.25E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061980.t1 | MTR_6g028130 | 92.386 | 197 | 15 | 0 | 1 | 197 | 1 | 197 | 2.22e-31 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 69 sgRNAs with CRISPR-Local
Find 96 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTAGTTGCTGAAGATAAAA+AGG | 0.227989 | 6.2:-20611197 | MS.gene061980:CDS |
| GGATGAAAAGAAGAAGAAAA+AGG | 0.313200 | 6.2:-20611131 | MS.gene061980:CDS |
| CTTCAGCTTGCTGACATCAT+TGG | 0.314579 | 6.2:+20610445 | None:intergenic |
| TGAGTTAGAAGTAGAATTGA+AGG | 0.380444 | 6.2:-20611467 | MS.gene061980:CDS |
| GAAAGAGAAGAAAGATGATA+AGG | 0.398401 | 6.2:-20610624 | MS.gene061980:CDS |
| GAAGTTGTTTCGAGGGAGAT+AGG | 0.398534 | 6.2:-20610599 | MS.gene061980:CDS |
| GGGAAGAAGAGAAAGTTATC+TGG | 0.404078 | 6.2:-20610479 | MS.gene061980:CDS |
| CAGCTACTCAACCGCATCCT+TGG | 0.418843 | 6.2:+20610310 | None:intergenic |
| GAAAGAAAAGGTGAAAAGTA+AGG | 0.419739 | 6.2:-20611239 | MS.gene061980:CDS |
| TCTAAAGATATCGGCGAAGA+TGG | 0.435850 | 6.2:-20611385 | MS.gene061980:CDS |
| CTTCTTCGCTTCTCCTTCAT+CGG | 0.436907 | 6.2:+20610724 | None:intergenic |
| AGAAACACTTCTTGAACAAA+AGG | 0.438069 | 6.2:-20610393 | MS.gene061980:CDS |
| ACACGATGACAAGGAAGAAA+AGG | 0.438754 | 6.2:-20611350 | MS.gene061980:CDS |
| GTGGTGAAATCGAAGGGAAA+TGG | 0.440714 | 6.2:-20610986 | MS.gene061980:CDS |
| GAAAGATGGCGAGGAGAAAA+CGG | 0.448994 | 6.2:-20611266 | MS.gene061980:CDS |
| GAAAAGAAAGACAAGGGAAA+GGG | 0.451768 | 6.2:-20610851 | MS.gene061980:CDS |
| GAAAACGGAGAAGAAAGAAA+AGG | 0.457657 | 6.2:-20611251 | MS.gene061980:CDS |
| GAAAATGAGGAAATTGATGA+TGG | 0.465754 | 6.2:-20610548 | MS.gene061980:CDS |
| TCAGACGATTCTAAAGATAT+CGG | 0.468189 | 6.2:-20611394 | MS.gene061980:CDS |
| AAAAGCTGGAAAAGATCAAC+GGG | 0.478776 | 6.2:-20610421 | MS.gene061980:CDS |
| GAAGAGAAAGTTATCTGGAA+AGG | 0.479246 | 6.2:-20610474 | MS.gene061980:CDS |
| AAACAAGGGTGAGGAAGAAG+AGG | 0.485502 | 6.2:-20610678 | MS.gene061980:CDS |
| AAGGAGAATAAAGACAAGGA+TGG | 0.499016 | 6.2:-20611220 | MS.gene061980:CDS |
| CGATGAAGGAGAAGCGAAGA+AGG | 0.499033 | 6.2:-20610723 | MS.gene061980:CDS |
| AGGAGAGGATAGTGAAAAGA+CGG | 0.508362 | 6.2:-20611059 | MS.gene061980:CDS |
| TGATAAAATCAAGCCGAAGA+AGG | 0.516483 | 6.2:-20610759 | MS.gene061980:CDS |
| GGGGAAAGAAGATGAAGGAG+AGG | 0.518816 | 6.2:-20611074 | MS.gene061980:CDS |
| AGGAAAGTGGAAAGATCGAT+GGG | 0.521761 | 6.2:-20610904 | MS.gene061980:CDS |
| AAGGAAAGTGGAAAGATCGA+TGG | 0.522100 | 6.2:-20610905 | MS.gene061980:CDS |
| AGGTTATGTCGTCGTGGAGA+AGG | 0.529920 | 6.2:-20610333 | MS.gene061980:CDS |
| TGAAGGTGAAGACGGTAAGA+AGG | 0.530612 | 6.2:-20611164 | MS.gene061980:CDS |
| GGAGAAAGCGGAAGAAAATG+AGG | 0.535091 | 6.2:-20610561 | MS.gene061980:CDS |
| ATAAGGATGAAGTTGTTTCG+AGG | 0.535585 | 6.2:-20610607 | MS.gene061980:CDS |
| AAAGAAGACAAGGACAAAGG+TGG | 0.536507 | 6.2:-20610500 | MS.gene061980:CDS |
| AGAAAAGAAAGACAAGGGAA+AGG | 0.537127 | 6.2:-20610852 | MS.gene061980:CDS |
| CAGCAAGCTGAAGCAAAAGC+TGG | 0.537145 | 6.2:-20610435 | MS.gene061980:CDS |
| GACAAGGGGAAAGAAGATGA+AGG | 0.546316 | 6.2:-20611079 | MS.gene061980:CDS |
| CGTGGAGAAGGCCAAGGATG+CGG | 0.547057 | 6.2:-20610321 | MS.gene061980:CDS |
| TGAGGATGTGGTGAAATCGA+AGG | 0.550576 | 6.2:-20610993 | MS.gene061980:CDS |
| TGGGAAGGAAGTGAAAGAGA+AGG | 0.550834 | 6.2:-20610528 | MS.gene061980:CDS |
| TGAAGAGATCGAAACAAAGA+AGG | 0.552163 | 6.2:-20611101 | MS.gene061980:CDS |
| TAAGGATGAAGTTGTTTCGA+GGG | 0.553952 | 6.2:-20610606 | MS.gene061980:CDS |
| ATCGAAGGGAAATGGAGAAG+AGG | 0.554785 | 6.2:-20610978 | MS.gene061980:CDS |
| AAGAAGCACAAAGAGAAAGA+TGG | 0.563342 | 6.2:-20611280 | MS.gene061980:CDS |
| AAAGCACAAGGATGAGGATG+TGG | 0.565238 | 6.2:-20611005 | MS.gene061980:CDS |
| AAGAAGACAAGGACAAAGGT+GGG | 0.568761 | 6.2:-20610499 | MS.gene061980:CDS |
| TGAGGAAATTGATGATGGGA+AGG | 0.569518 | 6.2:-20610543 | MS.gene061980:CDS |
| AAAATGAGGAAATTGATGAT+GGG | 0.577627 | 6.2:-20610547 | MS.gene061980:CDS |
| AACAAGGGTGAGGAAGAAGA+GGG | 0.584773 | 6.2:-20610677 | MS.gene061980:CDS |
| GAGGATGTGGTGAAATCGAA+GGG | 0.585612 | 6.2:-20610992 | MS.gene061980:CDS |
| GGAAAGGGCGATGAAGATGA+CGG | 0.589986 | 6.2:-20610836 | MS.gene061980:CDS |
| ATCGAAACAAAGAAGGACAA+GGG | 0.592480 | 6.2:-20611094 | MS.gene061980:CDS |
| ATACGAGAAGCAGAAGATGA+AGG | 0.592634 | 6.2:-20610353 | MS.gene061980:CDS |
| CAAAAGCTGGAAAAGATCAA+CGG | 0.605861 | 6.2:-20610422 | MS.gene061980:CDS |
| TCGAAACAAAGAAGGACAAG+GGG | 0.610740 | 6.2:-20611093 | MS.gene061980:CDS |
| GAAAGTGGAAAGATCGATGG+GGG | 0.616362 | 6.2:-20610902 | MS.gene061980:CDS |
| GATCGAAACAAAGAAGGACA+AGG | 0.618475 | 6.2:-20611095 | MS.gene061980:CDS |
| GCACAAAGAGAAAGATGGCG+AGG | 0.621008 | 6.2:-20611275 | MS.gene061980:CDS |
| TGAGAAGAAACACGATGACA+AGG | 0.629131 | 6.2:-20611359 | MS.gene061980:CDS |
| AAAGGCGATGAAGGTGAAGA+CGG | 0.638732 | 6.2:-20611172 | MS.gene061980:CDS |
| GAAGGTTAAGAACAAATCAG+TGG | 0.639055 | 6.2:-20611449 | MS.gene061980:CDS |
| TGTCGTCGTGGAGAAGGCCA+AGG | 0.642134 | 6.2:-20610327 | MS.gene061980:CDS |
| ACAAAAGACCAAGGAGAAAG+CGG | 0.644012 | 6.2:-20610573 | MS.gene061980:CDS |
| GTTGTTTCGAGGGAGATAGG+TGG | 0.649540 | 6.2:-20610596 | MS.gene061980:CDS |
| CTCTCTAAAGATCAAGACTG+AGG | 0.653524 | 6.2:-20611524 | MS.gene061980:CDS |
| AAGTAAGGAGAATAAAGACA+AGG | 0.656406 | 6.2:-20611224 | MS.gene061980:CDS |
| GGAAAGTGGAAAGATCGATG+GGG | 0.656992 | 6.2:-20610903 | MS.gene061980:CDS |
| AGATGAAGGTTATGTCGTCG+TGG | 0.684945 | 6.2:-20610339 | MS.gene061980:CDS |
| GATAGGTGGACAAAAGACCA+AGG | 0.718939 | 6.2:-20610582 | MS.gene061980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAGAAAAGAAAAACAA+GGG | - | chr6.2:20611165-20611184 | MS.gene061980:CDS | 15.0% |
| !! | AAAAAAGAAAAGAAAGACAA+GGG | - | chr6.2:20611000-20611019 | MS.gene061980:CDS | 20.0% |
| !! | AGAGAATAAGAAAAAGAAAA+AGG | - | chr6.2:20611047-20611066 | MS.gene061980:CDS | 20.0% |
| !! | GAAAAAAGAAAAGAAAAACA+AGG | - | chr6.2:20611164-20611183 | MS.gene061980:CDS | 20.0% |
| ! | AGAAAAGGAAAAGAAAAAGA+AGG | - | chr6.2:20610522-20610541 | MS.gene061980:CDS | 25.0% |
| ! | GAAAAAAGAAAAGAAAGACA+AGG | - | chr6.2:20610999-20611018 | MS.gene061980:CDS | 25.0% |
| ! | TGAGAATAAGAAAAAGAAGA+AGG | - | chr6.2:20610912-20610931 | MS.gene061980:CDS | 25.0% |
| !! | AAAATGAGGAAATTGATGAT+GGG | - | chr6.2:20611310-20611329 | MS.gene061980:CDS | 25.0% |
| AAAAAAGAAGACAAGGACAA+AGG | - | chr6.2:20611354-20611373 | MS.gene061980:CDS | 30.0% | |
| AAAAAGCGAAAAGAAAGACA+AGG | - | chr6.2:20610822-20610841 | MS.gene061980:CDS | 30.0% | |
| AAAGAAAAAGAGAAGGAAAG+TGG | - | chr6.2:20610940-20610959 | MS.gene061980:CDS | 30.0% | |
| AAAGAAGAAGAAAAAGGAGA+AGG | - | chr6.2:20610732-20610751 | MS.gene061980:CDS | 30.0% | |
| AAGTAAGGAGAATAAAGACA+AGG | - | chr6.2:20610633-20610652 | MS.gene061980:CDS | 30.0% | |
| AGAAACACTTCTTGAACAAA+AGG | - | chr6.2:20611464-20611483 | MS.gene061980:CDS | 30.0% | |
| AGTAGTTGCTGAAGATAAAA+AGG | - | chr6.2:20610660-20610679 | MS.gene061980:CDS | 30.0% | |
| GAAAATGAGGAAATTGATGA+TGG | - | chr6.2:20611309-20611328 | MS.gene061980:CDS | 30.0% | |
| GAAAGAAAAGGTGAAAAGTA+AGG | - | chr6.2:20610618-20610637 | MS.gene061980:CDS | 30.0% | |
| GAAAGAGAAGAAAGATGATA+AGG | - | chr6.2:20611233-20611252 | MS.gene061980:CDS | 30.0% | |
| GGATAAGAAAGAAAAAGAGA+AGG | - | chr6.2:20610933-20610952 | MS.gene061980:CDS | 30.0% | |
| GGATGAAAAGAAGAAGAAAA+AGG | - | chr6.2:20610726-20610745 | MS.gene061980:CDS | 30.0% | |
| GTAGTTGCTGAAGATAAAAA+GGG | - | chr6.2:20610661-20610680 | MS.gene061980:CDS | 30.0% | |
| TGAAAAAGAAGGTGATGTTA+AGG | - | chr6.2:20610357-20610376 | MS.gene061980:CDS | 30.0% | |
| TGAGTTAGAAGTAGAATTGA+AGG | - | chr6.2:20610390-20610409 | MS.gene061980:CDS | 30.0% | |
| ! | TCAGACGATTCTAAAGATAT+CGG | - | chr6.2:20610463-20610482 | MS.gene061980:CDS | 30.0% |
| AAAAGCTGGAAAAGATCAAC+GGG | - | chr6.2:20611436-20611455 | MS.gene061980:CDS | 35.0% | |
| AAGACTGAGGATGAAAAAGA+AGG | - | chr6.2:20610346-20610365 | MS.gene061980:CDS | 35.0% | |
| AAGGAGAATAAAGACAAGGA+TGG | - | chr6.2:20610637-20610656 | MS.gene061980:CDS | 35.0% | |
| AGAAAAGAAAAACAAGGGTG+AGG | - | chr6.2:20611170-20611189 | MS.gene061980:CDS | 35.0% | |
| AGAAAAGAAAGACAAGGGAA+AGG | - | chr6.2:20611005-20611024 | MS.gene061980:CDS | 35.0% | |
| ATCGAAACAAAGAAGGACAA+GGG | - | chr6.2:20610763-20610782 | MS.gene061980:CDS | 35.0% | |
| CAAAAGCTGGAAAAGATCAA+CGG | - | chr6.2:20611435-20611454 | MS.gene061980:CDS | 35.0% | |
| GAAAACGGAGAAGAAAGAAA+AGG | - | chr6.2:20610606-20610625 | MS.gene061980:CDS | 35.0% | |
| GAAAAGAAAGACAAGGGAAA+GGG | - | chr6.2:20611006-20611025 | MS.gene061980:CDS | 35.0% | |
| GAAAGAAAAAGAGAAGGACA+TGG | - | chr6.2:20611074-20611093 | MS.gene061980:CDS | 35.0% | |
| GAAGAGAAAGTTATCTGGAA+AGG | - | chr6.2:20611383-20611402 | MS.gene061980:CDS | 35.0% | |
| GAAGGAGAAAAAAGAAGACA+AGG | - | chr6.2:20611347-20611366 | MS.gene061980:CDS | 35.0% | |
| GAAGGTTAAGAACAAATCAG+TGG | - | chr6.2:20610408-20610427 | MS.gene061980:CDS | 35.0% | |
| GCTGAAGATAAAAAGGGAAA+AGG | - | chr6.2:20610667-20610686 | MS.gene061980:CDS | 35.0% | |
| TGAAGAGATCGAAACAAAGA+AGG | - | chr6.2:20610756-20610775 | MS.gene061980:CDS | 35.0% | |
| TGATAAAATCAAGCCGAAGA+AGG | - | chr6.2:20611098-20611117 | MS.gene061980:CDS | 35.0% | |
| ! | AAGAAGCACAAAGAGAAAGA+TGG | - | chr6.2:20610577-20610596 | MS.gene061980:CDS | 35.0% |
| ! | ATAAGGATGAAGTTGTTTCG+AGG | - | chr6.2:20611250-20611269 | MS.gene061980:CDS | 35.0% |
| ! | GGAGAAAAAGAAAAAGCACA+AGG | - | chr6.2:20610429-20610448 | MS.gene061980:CDS | 35.0% |
| ! | TAAGGATGAAGTTGTTTCGA+GGG | - | chr6.2:20611251-20611270 | MS.gene061980:CDS | 35.0% |
| !!! | GTTTTTTCACTGTCCTTCTT+CGG | + | chr6.2:20611114-20611133 | None:intergenic | 35.0% |
| AAAAAGGGAAAAGGCGATGA+AGG | - | chr6.2:20610676-20610695 | MS.gene061980:CDS | 40.0% | |
| AAAGAAGACAAGGACAAAGG+TGG | - | chr6.2:20611357-20611376 | MS.gene061980:CDS | 40.0% | |
| AAGAAGACAAGGACAAAGGT+GGG | - | chr6.2:20611358-20611377 | MS.gene061980:CDS | 40.0% | |
| AAGGAAAGTGGAAAGATCGA+TGG | - | chr6.2:20610952-20610971 | MS.gene061980:CDS | 40.0% | |
| ACAAAAGACCAAGGAGAAAG+CGG | - | chr6.2:20611284-20611303 | MS.gene061980:CDS | 40.0% | |
| ACACGATGACAAGGAAGAAA+AGG | - | chr6.2:20610507-20610526 | MS.gene061980:CDS | 40.0% | |
| AGGAAAGTGGAAAGATCGAT+GGG | - | chr6.2:20610953-20610972 | MS.gene061980:CDS | 40.0% | |
| AGGAGAGGATAGTGAAAAGA+CGG | - | chr6.2:20610798-20610817 | MS.gene061980:CDS | 40.0% | |
| ATACGAGAAGCAGAAGATGA+AGG | - | chr6.2:20611504-20611523 | MS.gene061980:CDS | 40.0% | |
| CGGTAAGAAGGAGAAAAAGA+AGG | - | chr6.2:20610705-20610724 | MS.gene061980:CDS | 40.0% | |
| GACAGTGAAAAAACCGATGA+AGG | - | chr6.2:20611120-20611139 | MS.gene061980:CDS | 40.0% | |
| GATCGAAACAAAGAAGGACA+AGG | - | chr6.2:20610762-20610781 | MS.gene061980:CDS | 40.0% | |
| GGGAAGAAGAGAAAGTTATC+TGG | - | chr6.2:20611378-20611397 | MS.gene061980:CDS | 40.0% | |
| TCGAAACAAAGAAGGACAAG+GGG | - | chr6.2:20610764-20610783 | MS.gene061980:CDS | 40.0% | |
| TCTAAAGATATCGGCGAAGA+TGG | - | chr6.2:20610472-20610491 | MS.gene061980:CDS | 40.0% | |
| TGAGAAGAAACACGATGACA+AGG | - | chr6.2:20610498-20610517 | MS.gene061980:CDS | 40.0% | |
| ! | ATTTTCTTCCGCTTTCTCCT+TGG | + | chr6.2:20611295-20611314 | None:intergenic | 40.0% |
| ! | CAAGGAGAAGAAAAAGCACA+AGG | - | chr6.2:20610840-20610859 | MS.gene061980:CDS | 40.0% |
| ! | CTCTCTAAAGATCAAGACTG+AGG | - | chr6.2:20610333-20610352 | MS.gene061980:CDS | 40.0% |
| ! | GAAGAAAAAGCACAAGGATG+AGG | - | chr6.2:20610846-20610865 | MS.gene061980:CDS | 40.0% |
| !! | TGAGGAAATTGATGATGGGA+AGG | - | chr6.2:20611314-20611333 | MS.gene061980:CDS | 40.0% |
| AAACAAGGGTGAGGAAGAAG+AGG | - | chr6.2:20611179-20611198 | MS.gene061980:CDS | 45.0% | |
| AAAGCACAAGGATGAGGATG+TGG | - | chr6.2:20610852-20610871 | MS.gene061980:CDS | 45.0% | |
| AAAGGCGATGAAGGTGAAGA+CGG | - | chr6.2:20610685-20610704 | MS.gene061980:CDS | 45.0% | |
| AACAAGGGTGAGGAAGAAGA+GGG | - | chr6.2:20611180-20611199 | MS.gene061980:CDS | 45.0% | |
| AGATGAAGGTTATGTCGTCG+TGG | - | chr6.2:20611518-20611537 | MS.gene061980:CDS | 45.0% | |
| ATCGAAGGGAAATGGAGAAG+AGG | - | chr6.2:20610879-20610898 | MS.gene061980:CDS | 45.0% | |
| CTTCTTCGCTTCTCCTTCAT+CGG | + | chr6.2:20611136-20611155 | None:intergenic | 45.0% | |
| GAAAGATGGCGAGGAGAAAA+CGG | - | chr6.2:20610591-20610610 | MS.gene061980:CDS | 45.0% | |
| GAAAGTGGAAAGATCGATGG+GGG | - | chr6.2:20610955-20610974 | MS.gene061980:CDS | 45.0% | |
| GACAAGGGGAAAGAAGATGA+AGG | - | chr6.2:20610778-20610797 | MS.gene061980:CDS | 45.0% | |
| GAGGATGTGGTGAAATCGAA+GGG | - | chr6.2:20610865-20610884 | MS.gene061980:CDS | 45.0% | |
| GATAGGTGGACAAAAGACCA+AGG | - | chr6.2:20611275-20611294 | MS.gene061980:CDS | 45.0% | |
| GGAAAGTGGAAAGATCGATG+GGG | - | chr6.2:20610954-20610973 | MS.gene061980:CDS | 45.0% | |
| GGAGAAAGCGGAAGAAAATG+AGG | - | chr6.2:20611296-20611315 | MS.gene061980:CDS | 45.0% | |
| GTGGTGAAATCGAAGGGAAA+TGG | - | chr6.2:20610871-20610890 | MS.gene061980:CDS | 45.0% | |
| TGAAGGTGAAGACGGTAAGA+AGG | - | chr6.2:20610693-20610712 | MS.gene061980:CDS | 45.0% | |
| TGAGGATGTGGTGAAATCGA+AGG | - | chr6.2:20610864-20610883 | MS.gene061980:CDS | 45.0% | |
| TGGGAAGGAAGTGAAAGAGA+AGG | - | chr6.2:20611329-20611348 | MS.gene061980:CDS | 45.0% | |
| ! | GAAGTTGTTTCGAGGGAGAT+AGG | - | chr6.2:20611258-20611277 | MS.gene061980:CDS | 45.0% |
| !! | CTTCAGCTTGCTGACATCAT+TGG | + | chr6.2:20611415-20611434 | None:intergenic | 45.0% |
| AGGTTATGTCGTCGTGGAGA+AGG | - | chr6.2:20611524-20611543 | MS.gene061980:CDS | 50.0% | |
| CAGCAAGCTGAAGCAAAAGC+TGG | - | chr6.2:20611422-20611441 | MS.gene061980:CDS | 50.0% | |
| CGATGAAGGAGAAGCGAAGA+AGG | - | chr6.2:20611134-20611153 | MS.gene061980:CDS | 50.0% | |
| GCACAAAGAGAAAGATGGCG+AGG | - | chr6.2:20610582-20610601 | MS.gene061980:CDS | 50.0% | |
| GGAAAGGGCGATGAAGATGA+CGG | - | chr6.2:20611021-20611040 | MS.gene061980:CDS | 50.0% | |
| GGGGAAAGAAGATGAAGGAG+AGG | - | chr6.2:20610783-20610802 | MS.gene061980:CDS | 50.0% | |
| ! | GTTGTTTCGAGGGAGATAGG+TGG | - | chr6.2:20611261-20611280 | MS.gene061980:CDS | 50.0% |
| CGATGGGGGAGAAGAGAAGA+AGG | - | chr6.2:20610969-20610988 | MS.gene061980:CDS | 55.0% | |
| CGTGGAGAAGGCCAAGGATG+CGG | - | chr6.2:20611536-20611555 | MS.gene061980:CDS | 60.0% | |
| TGTCGTCGTGGAGAAGGCCA+AGG | - | chr6.2:20611530-20611549 | MS.gene061980:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 20610313 | 20611566 | 20610313 | ID=MS.gene061980 |
| chr6.2 | mRNA | 20610313 | 20611566 | 20610313 | ID=MS.gene061980.t1;Parent=MS.gene061980 |
| chr6.2 | exon | 20610313 | 20611566 | 20610313 | ID=MS.gene061980.t1.exon1;Parent=MS.gene061980.t1 |
| chr6.2 | CDS | 20610313 | 20611566 | 20610313 | ID=cds.MS.gene061980.t1;Parent=MS.gene061980.t1 |
| Gene Sequence |
| Protein sequence |
