AlfalfaGEDB | MS.gene35611

M. sativa cultivar XinJiangDaYe / MS.gene35611

KEGG: K09286
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00847.23

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35611.t1	XP_013460867.1	89.3	206	21	1	1	205	135	340	2.40E-98	368.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35611.t1	Q8H1E4	62.7	201	63	3	6	205	143	332	1.1e-51	204.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35611.t1	G8A385	89.3	206	21	1	1	205	135	340	1.7e-98	368.2

TFs/TRs:

Gene ID	Type	Classification
MS.gene35611.t1	TF	AP2/ERF-ERF

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049142	MS.gene35611	0.807865	4.10E-50	-1.69E-46
MS.gene049159	MS.gene35611	0.831073	2.05E-55	-1.69E-46
MS.gene049254	MS.gene35611	0.845224	4.64E-59	-1.69E-46
MS.gene049343	MS.gene35611	0.830132	3.49E-55	-1.69E-46
MS.gene049404	MS.gene35611	0.804488	2.11E-49	-1.69E-46
MS.gene049808	MS.gene35611	0.830574	2.72E-55	-1.69E-46
MS.gene049983	MS.gene35611	0.806485	8.04E-50	-1.69E-46
MS.gene050156	MS.gene35611	0.822782	1.97E-53	-1.69E-46
MS.gene050312	MS.gene35611	0.809546	1.79E-50	-1.69E-46
MS.gene050605	MS.gene35611	0.812727	3.67E-51	-1.69E-46
MS.gene050680	MS.gene35611	0.805162	1.52E-49	-1.69E-46
MS.gene050750	MS.gene35611	0.820739	5.85E-53	-1.69E-46
MS.gene050799	MS.gene35611	0.820419	6.93E-53	-1.69E-46
MS.gene050844	MS.gene35611	0.826196	3.10E-54	-1.69E-46
MS.gene050905	MS.gene35611	-0.810712	1.01E-50	-1.69E-46
MS.gene050953	MS.gene35611	0.817263	3.61E-52	-1.69E-46
MS.gene051181	MS.gene35611	0.830896	2.27E-55	-1.69E-46
MS.gene051363	MS.gene35611	0.803861	2.85E-49	-1.69E-46
MS.gene051368	MS.gene35611	0.806072	9.82E-50	-1.69E-46
MS.gene051452	MS.gene35611	0.830574	2.72E-55	-1.69E-46
MS.gene051926	MS.gene35611	-0.806321	8.71E-50	-1.69E-46
MS.gene052012	MS.gene35611	0.808068	3.71E-50	-1.69E-46
MS.gene052190	MS.gene35611	0.824531	7.67E-54	-1.69E-46
MS.gene052518	MS.gene35611	0.803935	2.75E-49	-1.69E-46
MS.gene052519	MS.gene35611	0.867683	1.14E-65	-1.69E-46
MS.gene052611	MS.gene35611	0.828114	1.08E-54	-1.69E-46
MS.gene052773	MS.gene35611	0.825101	5.63E-54	-1.69E-46
MS.gene052863	MS.gene35611	0.860487	2.00E-63	-1.69E-46
MS.gene052867	MS.gene35611	0.816771	4.66E-52	-1.69E-46
MS.gene052954	MS.gene35611	0.836702	8.02E-57	-1.69E-46
MS.gene053006	MS.gene35611	0.833458	5.27E-56	-1.69E-46
MS.gene053008	MS.gene35611	0.864529	1.14E-64	-1.69E-46
MS.gene053082	MS.gene35611	0.800818	1.21E-48	-1.69E-46
MS.gene053145	MS.gene35611	0.852575	4.22E-61	-1.69E-46
MS.gene053146	MS.gene35611	0.82891	6.91E-55	-1.69E-46
MS.gene053166	MS.gene35611	0.844569	6.97E-59	-1.69E-46
MS.gene053201	MS.gene35611	0.804614	1.99E-49	-1.69E-46
MS.gene053202	MS.gene35611	0.828088	1.09E-54	-1.69E-46
MS.gene053226	MS.gene35611	0.812828	3.48E-51	-1.69E-46
MS.gene053900	MS.gene35611	0.817303	3.54E-52	-1.69E-46
MS.gene05415	MS.gene35611	0.833888	4.12E-56	-1.69E-46
MS.gene054236	MS.gene35611	0.810372	1.19E-50	-1.69E-46
MS.gene054405	MS.gene35611	0.811589	6.49E-51	-1.69E-46
MS.gene054472	MS.gene35611	0.819837	9.41E-53	-1.69E-46
MS.gene054479	MS.gene35611	0.801404	9.15E-49	-1.69E-46
MS.gene054559	MS.gene35611	0.842134	3.11E-58	-1.69E-46
MS.gene054582	MS.gene35611	0.8349	2.29E-56	-1.69E-46
MS.gene054651	MS.gene35611	0.853774	1.91E-61	-1.69E-46
MS.gene054657	MS.gene35611	0.817447	3.28E-52	-1.69E-46
MS.gene054775	MS.gene35611	0.805743	1.15E-49	-1.69E-46
MS.gene05510	MS.gene35611	0.821808	3.32E-53	-1.69E-46
MS.gene055227	MS.gene35611	0.821868	3.21E-53	-1.69E-46
MS.gene055228	MS.gene35611	0.816738	4.74E-52	-1.69E-46
MS.gene055230	MS.gene35611	0.80556	1.26E-49	-1.69E-46
MS.gene055464	MS.gene35611	0.820287	7.43E-53	-1.69E-46
MS.gene055586	MS.gene35611	0.805934	1.05E-49	-1.69E-46
MS.gene055589	MS.gene35611	0.802263	6.10E-49	-1.69E-46
MS.gene055623	MS.gene35611	0.820012	8.59E-53	-1.69E-46
MS.gene055701	MS.gene35611	0.834936	2.25E-56	-1.69E-46
MS.gene055818	MS.gene35611	0.880775	4.16E-70	-1.69E-46
MS.gene055841	MS.gene35611	0.818288	2.12E-52	-1.69E-46
MS.gene055926	MS.gene35611	0.802279	6.05E-49	-1.69E-46
MS.gene05604	MS.gene35611	0.806834	6.79E-50	-1.69E-46
MS.gene056252	MS.gene35611	0.813024	3.15E-51	-1.69E-46
MS.gene056366	MS.gene35611	0.842966	1.87E-58	-1.69E-46
MS.gene056506	MS.gene35611	0.804355	2.25E-49	-1.69E-46
MS.gene056595	MS.gene35611	0.824852	6.45E-54	-1.69E-46
MS.gene05690	MS.gene35611	0.809013	2.33E-50	-1.69E-46
MS.gene057021	MS.gene35611	0.802221	6.22E-49	-1.69E-46
MS.gene057026	MS.gene35611	0.843875	1.07E-58	-1.69E-46
MS.gene057060	MS.gene35611	0.804731	1.88E-49	-1.69E-46
MS.gene057208	MS.gene35611	0.845158	4.84E-59	-1.69E-46
MS.gene057444	MS.gene35611	0.823298	1.49E-53	-1.69E-46
MS.gene057598	MS.gene35611	0.827903	1.21E-54	-1.69E-46
MS.gene057693	MS.gene35611	0.808781	2.62E-50	-1.69E-46
MS.gene057855	MS.gene35611	0.856159	3.88E-62	-1.69E-46
MS.gene058008	MS.gene35611	0.840962	6.34E-58	-1.69E-46
MS.gene058009	MS.gene35611	0.870687	1.21E-66	-1.69E-46
MS.gene058010	MS.gene35611	0.816314	5.89E-52	-1.69E-46
MS.gene058037	MS.gene35611	0.802701	4.95E-49	-1.69E-46
MS.gene058088	MS.gene35611	0.835058	2.09E-56	-1.69E-46
MS.gene058595	MS.gene35611	0.834329	3.19E-56	-1.69E-46
MS.gene058625	MS.gene35611	0.839851	1.24E-57	-1.69E-46
MS.gene058781	MS.gene35611	0.837462	5.12E-57	-1.69E-46
MS.gene058783	MS.gene35611	0.881251	2.80E-70	-1.69E-46
MS.gene058829	MS.gene35611	0.804629	1.97E-49	-1.69E-46
MS.gene058979	MS.gene35611	0.877534	5.82E-69	-1.69E-46
MS.gene059151	MS.gene35611	0.829568	4.79E-55	-1.69E-46
MS.gene059789	MS.gene35611	0.801086	1.06E-48	-1.69E-46
MS.gene059842	MS.gene35611	0.825008	5.92E-54	-1.69E-46
MS.gene059952	MS.gene35611	0.801148	1.03E-48	-1.69E-46
MS.gene060011	MS.gene35611	0.836878	7.23E-57	-1.69E-46
MS.gene060310	MS.gene35611	0.817064	4.00E-52	-1.69E-46
MS.gene060322	MS.gene35611	0.857829	1.25E-62	-1.69E-46
MS.gene060572	MS.gene35611	0.838833	2.27E-57	-1.69E-46
MS.gene060685	MS.gene35611	0.807531	4.83E-50	-1.69E-46
MS.gene060935	MS.gene35611	0.850782	1.36E-60	-1.69E-46
MS.gene060937	MS.gene35611	0.826352	2.84E-54	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35611.t1	MTR_3g074130	98.058	206	3	1	1	205	135	340	1.43e-149	419
MS.gene35611.t1	MTR_5g062700	57.944	214	70	4	6	205	164	371	5.34e-71	220
MS.gene35611.t1	MTR_8g090350	55.340	206	72	6	1	205	100	286	2.67e-64	200
MS.gene35611.t1	MTR_1g090170	48.366	153	65	5	13	157	150	296	7.14e-38	133
MS.gene35611.t1	MTR_1g090170	63.107	103	29	3	13	112	237	333	1.75e-37	134
MS.gene35611.t1	MTR_2g090235	87.097	62	8	0	12	73	215	276	8.79e-34	125
MS.gene35611.t1	MTR_5g009410	69.231	91	28	0	13	103	115	205	9.32e-29	109
MS.gene35611.t1	MTR_7g092190	56.122	98	39	3	15	111	30	124	1.26e-25	100
MS.gene35611.t1	MTR_7g021010	75.439	57	14	0	15	71	51	107	1.61e-25	97.8
MS.gene35611.t1	MTR_7g021010	75.439	57	14	0	15	71	12	68	4.11e-25	95.5
MS.gene35611.t1	MTR_7g020980	75.439	57	14	0	15	71	51	107	8.49e-25	95.9
MS.gene35611.t1	MTR_1g014820	33.333	174	89	4	9	178	21	171	1.26e-23	95.1
MS.gene35611.t1	MTR_1g014780	62.500	64	24	0	9	72	32	95	1.55e-23	94.0
MS.gene35611.t1	MTR_1g014860	62.500	64	24	0	9	72	16	79	2.92e-23	93.2
MS.gene35611.t1	MTR_3g106290	62.500	64	24	0	8	71	1	64	3.65e-23	92.0
MS.gene35611.t1	MTR_4g008860	62.500	64	24	0	8	71	1	64	4.56e-23	92.0
MS.gene35611.t1	MTR_1g087920	62.162	74	23	1	4	72	61	134	7.07e-23	94.0
MS.gene35611.t1	MTR_3g090760	35.784	204	102	8	6	197	96	282	9.76e-23	94.4
MS.gene35611.t1	MTR_2g435590	60.563	71	27	1	2	72	84	153	1.09e-22	92.4
MS.gene35611.t1	MTR_2g043030	35.032	157	88	4	12	167	16	159	1.59e-22	90.9
MS.gene35611.t1	MTR_1g014800	61.194	67	25	1	7	72	22	88	1.93e-22	90.9
MS.gene35611.t1	MTR_2g043050	56.000	75	27	1	4	72	2	76	2.85e-22	90.5
MS.gene35611.t1	MTR_4g086160	66.154	65	18	1	15	75	96	160	3.07e-22	90.5
MS.gene35611.t1	MTR_2g089170	69.492	59	18	0	15	73	65	123	3.27e-22	89.4
MS.gene35611.t1	MTR_5g083340	67.692	65	21	0	15	79	85	149	3.83e-22	93.2
MS.gene35611.t1	MTR_0939s0010	68.333	60	19	0	15	74	65	124	3.84e-22	89.7
MS.gene35611.t1	MTR_4g086220	71.930	57	16	0	15	71	96	152	4.06e-22	90.5
MS.gene35611.t1	MTR_8g092460	64.516	62	22	0	10	71	140	201	4.07e-22	92.0
MS.gene35611.t1	MTR_4g100380	71.667	60	16	1	13	71	143	202	5.84e-22	90.5
MS.gene35611.t1	MTR_2g103700	49.462	93	46	1	12	103	4	96	7.20e-22	88.2
MS.gene35611.t1	MTR_8g006840	62.319	69	22	2	15	79	125	193	1.43e-21	88.2
MS.gene35611.t1	MTR_3g102100	56.944	72	28	1	2	73	35	103	1.60e-21	87.4
MS.gene35611.t1	MTR_5g009620	68.254	63	20	0	8	70	105	167	1.81e-21	90.1
MS.gene35611.t1	MTR_4g086165	70.175	57	17	0	15	71	82	138	1.86e-21	88.2
MS.gene35611.t1	MTR_4g086190	70.175	57	17	0	15	71	96	152	1.98e-21	88.6
MS.gene35611.t1	MTR_4g088005	60.000	75	26	2	2	72	41	115	2.55e-21	85.5
MS.gene35611.t1	MTR_1g074310	69.492	59	17	1	15	72	21	79	3.17e-21	85.9
MS.gene35611.t1	MTR_4g114570	63.333	60	22	0	12	71	4	63	5.60e-21	87.0
MS.gene35611.t1	MTR_2g078680	67.241	58	19	0	15	72	31	88	8.20e-21	86.3
MS.gene35611.t1	MTR_4g010640	63.333	60	22	0	12	71	4	63	1.01e-20	86.3
MS.gene35611.t1	MTR_8g006815	65.000	60	20	1	15	73	96	155	1.10e-20	85.9
MS.gene35611.t1	MTR_7g081815	67.742	62	19	1	13	73	59	120	1.28e-20	85.9
MS.gene35611.t1	MTR_5g083330	63.077	65	24	0	15	79	35	99	1.73e-20	87.4
MS.gene35611.t1	MTR_8g006825	64.516	62	21	1	13	73	94	155	2.20e-20	85.1
MS.gene35611.t1	MTR_1g070070	62.687	67	21	2	15	80	21	84	2.29e-20	83.6
MS.gene35611.t1	MTR_7g081805	67.742	62	19	1	13	73	59	120	2.34e-20	85.1
MS.gene35611.t1	MTR_7g081795	66.154	65	20	2	11	73	55	119	2.61e-20	85.1
MS.gene35611.t1	MTR_3g110205	45.361	97	41	2	14	109	42	127	2.95e-20	84.3
MS.gene35611.t1	MTR_2g015040	65.000	60	20	1	13	71	61	120	3.03e-20	83.6
MS.gene35611.t1	MTR_8g022820	64.912	57	20	0	15	71	123	179	4.41e-20	87.0
MS.gene35611.t1	MTR_8g022820	64.912	57	20	0	15	71	124	180	4.49e-20	87.0
MS.gene35611.t1	MTR_8g022820	64.912	57	20	0	15	71	124	180	4.49e-20	87.0
MS.gene35611.t1	MTR_5g016750	48.193	83	41	1	2	82	12	94	4.61e-20	83.6
MS.gene35611.t1	MTR_5g012910	60.317	63	25	0	14	76	27	89	4.66e-20	83.6
MS.gene35611.t1	MTR_3g105510	57.576	66	28	0	5	70	27	92	6.93e-20	84.7
MS.gene35611.t1	MTR_7g117690	61.017	59	23	0	14	72	27	85	7.53e-20	82.8
MS.gene35611.t1	MTR_2g105380	64.912	57	20	0	15	71	117	173	7.82e-20	86.3
MS.gene35611.t1	MTR_5g085070	62.295	61	23	0	15	75	51	111	8.56e-20	85.1
MS.gene35611.t1	MTR_2g014300	61.538	65	25	0	15	79	15	79	8.57e-20	82.8
MS.gene35611.t1	MTR_1g048610	66.667	60	19	1	13	71	87	146	8.61e-20	84.3
MS.gene35611.t1	MTR_2g043040	57.377	61	26	0	12	72	16	76	9.00e-20	84.0
MS.gene35611.t1	MTR_6g088405	63.333	60	22	0	14	73	43	102	9.03e-20	84.0
MS.gene35611.t1	MTR_1g028560	69.643	56	17	0	15	70	115	170	9.07e-20	85.9
MS.gene35611.t1	MTR_1g074230	68.333	60	16	2	15	72	19	77	9.41e-20	81.6
MS.gene35611.t1	MTR_4g035430	52.113	71	29	1	6	71	18	88	1.18e-19	83.6
MS.gene35611.t1	MTR_5g082950	71.429	56	16	0	15	70	66	121	1.26e-19	85.5
MS.gene35611.t1	MTR_7g046260	62.712	59	22	0	15	73	61	119	1.78e-19	83.6
MS.gene35611.t1	MTR_1g019110	60.656	61	24	0	13	73	42	102	2.01e-19	82.0
MS.gene35611.t1	MTR_4g111915	51.807	83	39	1	13	94	51	133	2.17e-19	80.9
MS.gene35611.t1	MTR_7g028925	59.375	64	23	1	9	72	23	83	2.25e-19	79.3
MS.gene35611.t1	MTR_8g099215	67.241	58	19	0	13	70	105	162	3.00e-19	84.0
MS.gene35611.t1	MTR_4g078710	63.158	57	21	0	15	71	28	84	3.27e-19	82.4
MS.gene35611.t1	MTR_8g006410	54.795	73	31	1	4	76	43	113	3.29e-19	82.0
MS.gene35611.t1	MTR_4g112490	54.430	79	35	1	13	90	51	129	3.78e-19	82.0
MS.gene35611.t1	MTR_4g054360	62.295	61	22	1	12	71	121	181	3.98e-19	83.2
MS.gene35611.t1	MTR_2g101340	53.968	63	29	0	14	76	40	102	4.15e-19	81.6
MS.gene35611.t1	MTR_2g015050	68.333	60	18	1	13	71	132	191	4.60e-19	83.2
MS.gene35611.t1	MTR_5g085100	62.295	61	23	0	15	75	46	106	5.46e-19	82.8
MS.gene35611.t1	MTR_8g027465	52.239	67	32	0	14	80	38	104	6.00e-19	80.5
MS.gene35611.t1	MTR_4g054740	61.667	60	22	1	13	71	95	154	6.17e-19	82.0
MS.gene35611.t1	MTR_4g100420	68.966	58	17	1	15	71	157	214	6.97e-19	83.2
MS.gene35611.t1	MTR_8g013860	59.322	59	24	0	15	73	47	105	8.73e-19	80.9
MS.gene35611.t1	MTR_3g053690	64.912	57	20	0	15	71	27	83	9.01e-19	81.3
MS.gene35611.t1	MTR_8g102800	60.000	60	24	0	14	73	36	95	1.08e-18	81.3
MS.gene35611.t1	MTR_2g014340	63.158	57	21	0	15	71	19	75	1.46e-18	80.1
MS.gene35611.t1	MTR_2g043020	54.098	61	28	0	12	72	16	76	1.59e-18	80.1
MS.gene35611.t1	MTR_4g100450	67.241	58	18	1	15	71	154	211	1.98e-18	81.6
MS.gene35611.t1	MTR_7g084370	66.071	56	19	0	15	70	42	97	2.34e-18	81.3
MS.gene35611.t1	MTR_4g100650	59.322	59	24	0	15	73	74	132	2.78e-18	80.5
MS.gene35611.t1	MTR_8g069360	62.712	59	22	0	12	70	41	99	3.77e-18	82.0
MS.gene35611.t1	MTR_5g075570	64.912	57	20	0	15	71	124	180	4.19e-18	80.5
MS.gene35611.t1	MTR_7g070220	65.079	63	15	1	15	70	78	140	5.56e-18	81.6
MS.gene35611.t1	MTR_2g438180	67.797	59	18	1	15	72	14	72	6.71e-18	76.6
MS.gene35611.t1	MTR_5g032820	66.071	56	19	0	15	70	46	101	7.18e-18	80.9
MS.gene35611.t1	MTR_4g119270	60.714	56	22	0	15	70	53	108	9.82e-18	80.1
MS.gene35611.t1	MTR_3g105480	62.963	54	20	0	17	70	33	86	1.68e-17	78.2
MS.gene35611.t1	MTR_7g096700	60.938	64	23	2	11	72	15	78	1.99e-17	75.9
MS.gene35611.t1	MTR_1g070035	61.017	59	22	1	13	70	75	133	2.25e-17	77.4
MS.gene35611.t1	MTR_1g097190	53.521	71	30	2	8	75	16	86	2.98e-17	75.1
MS.gene35611.t1	MTR_6g465460	54.930	71	30	1	2	70	39	109	3.02e-17	78.2
MS.gene35611.t1	MTR_6g465450	53.521	71	31	1	2	70	39	109	3.12e-17	77.4
MS.gene35611.t1	MTR_7g096750	63.793	58	20	1	15	71	20	77	3.98e-17	74.7
MS.gene35611.t1	MTR_1g074250	60.000	60	22	1	15	72	19	78	4.47e-17	74.7
MS.gene35611.t1	MTR_1g090290	48.276	87	34	2	12	97	110	186	5.32e-17	75.9
MS.gene35611.t1	MTR_2g019750	58.929	56	23	0	15	70	50	105	6.46e-17	77.4
MS.gene35611.t1	MTR_1g069985	61.017	59	22	1	13	70	73	131	8.12e-17	75.9
MS.gene35611.t1	MTR_6g465430	53.521	71	31	1	2	70	39	109	8.22e-17	76.6
MS.gene35611.t1	MTR_6g465530	47.619	84	33	1	14	97	32	104	1.07e-16	75.1
MS.gene35611.t1	MTR_1g070020	57.143	63	26	1	9	70	64	126	1.41e-16	75.1
MS.gene35611.t1	MTR_4g054860	58.333	60	24	1	13	71	129	188	1.45e-16	76.3
MS.gene35611.t1	MTR_6g465510	61.404	57	22	0	14	70	32	88	1.58e-16	75.1
MS.gene35611.t1	MTR_1g070000	61.818	55	20	1	17	70	86	140	2.06e-16	75.1
MS.gene35611.t1	MTR_6g465690	59.649	57	23	0	14	70	62	118	2.58e-16	75.5
MS.gene35611.t1	MTR_1g070015	61.404	57	21	1	15	70	84	140	3.08e-16	74.3
MS.gene35611.t1	MTR_7g085810	58.065	62	26	0	9	70	24	85	3.16e-16	75.1
MS.gene35611.t1	MTR_6g465420	52.113	71	32	1	2	70	39	109	3.22e-16	75.1
MS.gene35611.t1	MTR_6g466000	59.649	57	23	0	14	70	56	112	3.87e-16	74.3
MS.gene35611.t1	MTR_1g101600	61.404	57	22	0	14	70	40	96	3.95e-16	73.9
MS.gene35611.t1	MTR_6g012970	56.923	65	28	0	6	70	29	93	4.28e-16	76.3
MS.gene35611.t1	MTR_8g032610	60.345	58	23	0	13	70	25	82	4.31e-16	75.5
MS.gene35611.t1	MTR_7g011630	54.286	70	32	0	1	70	28	97	6.10e-16	75.9
MS.gene35611.t1	MTR_5g008790	51.562	64	29	1	12	73	15	78	6.51e-16	72.4
MS.gene35611.t1	MTR_2g016730	64.286	56	20	0	15	70	23	78	7.03e-16	75.1
MS.gene35611.t1	MTR_1g070045	54.412	68	30	1	4	70	55	122	9.69e-16	72.0
MS.gene35611.t1	MTR_3g107380	46.602	103	44	2	12	103	5	107	1.32e-15	72.4
MS.gene35611.t1	MTR_5g008470	39.535	86	39	1	17	102	77	149	1.43e-15	72.0
MS.gene35611.t1	MTR_4g082345	58.730	63	26	0	8	70	41	103	2.89e-15	73.2
MS.gene35611.t1	MTR_1g006660	60.656	61	24	0	14	74	46	106	2.99e-15	72.4
MS.gene35611.t1	MTR_6g466130	59.649	57	23	0	14	70	65	121	3.11e-15	72.0
MS.gene35611.t1	MTR_5g008590	66.102	59	20	0	15	73	11	69	3.14e-15	70.9
MS.gene35611.t1	MTR_6g466020	56.140	57	25	0	14	70	42	98	4.30e-15	70.5
MS.gene35611.t1	MTR_1g023170	69.492	59	18	0	15	73	40	98	4.87e-15	72.0
MS.gene35611.t1	MTR_6g465850	59.649	57	23	0	14	70	62	118	5.04e-15	72.0
MS.gene35611.t1	MTR_8g085960	58.929	56	23	0	15	70	25	80	7.27e-15	70.9
MS.gene35611.t1	MTR_6g088425	61.667	60	23	0	14	73	48	107	8.21e-15	70.9
MS.gene35611.t1	MTR_4g102670	58.621	58	23	1	15	72	15	71	1.86e-14	68.6
MS.gene35611.t1	MTR_1g069960	66.102	59	19	1	15	72	27	85	2.86e-14	67.8
MS.gene35611.t1	MTR_6g029180	58.929	56	23	0	15	70	33	88	5.01e-14	69.7
MS.gene35611.t1	MTR_3g098580	49.474	95	45	2	6	100	69	160	7.41e-14	68.6
MS.gene35611.t1	MTR_5g008540	43.750	80	43	1	2	79	11	90	8.22e-14	65.1
MS.gene35611.t1	MTR_5g010930	48.052	77	32	2	2	70	34	110	9.97e-14	67.8
MS.gene35611.t1	MTR_3g112440	61.644	73	27	1	1	73	26	97	1.30e-13	67.4
MS.gene35611.t1	MTR_5g010940	48.052	77	32	2	2	70	39	115	1.61e-13	67.4
MS.gene35611.t1	MTR_7g096810	59.091	66	26	1	15	79	13	78	1.61e-13	65.1
MS.gene35611.t1	MTR_3g095190	68.421	57	18	0	15	71	170	226	1.88e-13	68.2
MS.gene35611.t1	MTR_1g012470	61.404	57	22	0	15	71	7	63	2.40e-13	66.2
MS.gene35611.t1	MTR_5g010910	48.052	77	32	2	2	70	34	110	2.81e-13	66.6
MS.gene35611.t1	MTR_2g085015	53.333	60	26	2	14	71	46	105	7.27e-13	65.5
MS.gene35611.t1	MTR_1g069945	62.500	64	23	1	9	71	95	158	7.40e-13	65.5
MS.gene35611.t1	MTR_7g096780	41.045	134	64	3	2	130	68	191	8.10e-13	65.5
MS.gene35611.t1	MTR_1g105400	50.909	55	27	0	10	64	110	164	1.00e-12	66.2
MS.gene35611.t1	MTR_1g040430	58.000	50	20	1	23	71	119	168	3.72e-12	63.2
MS.gene35611.t1	MTR_1g110970	51.667	60	25	2	15	70	97	156	4.16e-12	64.3
MS.gene35611.t1	MTR_5g008550	50.000	68	33	1	6	73	13	79	4.43e-12	62.8
MS.gene35611.t1	MTR_1g074370	65.000	60	20	1	13	71	71	130	4.98e-12	62.8
MS.gene35611.t1	MTR_1g069940	60.938	64	24	1	9	71	89	152	5.16e-12	63.2
MS.gene35611.t1	MTR_3g017420	53.061	49	23	0	23	71	3	51	5.23e-12	59.7
MS.gene35611.t1	MTR_5g057810	45.122	82	37	1	8	81	81	162	5.68e-12	63.5
MS.gene35611.t1	MTR_5g057647	45.122	82	37	1	8	81	81	162	5.68e-12	63.5
MS.gene35611.t1	MTR_8g023680	63.415	41	15	0	15	55	116	156	7.59e-12	63.5
MS.gene35611.t1	MTR_8g023700	61.905	42	16	0	14	55	116	157	1.16e-11	63.2
MS.gene35611.t1	MTR_5g085125	52.632	57	27	0	15	71	16	72	1.40e-11	60.8
MS.gene35611.t1	MTR_3g062440	52.778	72	31	2	2	72	104	173	1.51e-11	62.0
MS.gene35611.t1	MTR_6g033255	67.213	61	20	0	13	73	18	78	1.67e-11	61.2
MS.gene35611.t1	MTR_1g043350	61.290	62	23	1	10	70	77	138	2.21e-11	61.2
MS.gene35611.t1	MTR_7g096830	60.000	60	23	1	13	71	96	155	6.64e-11	60.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35611.t1	AT1G78080	65.842	202	55	5	6	205	143	332	3.97e-83	250
MS.gene35611.t1	AT1G22190	57.346	211	58	7	1	205	69	253	1.03e-65	203
MS.gene35611.t1	AT2G22200	46.698	212	93	5	1	205	57	255	1.54e-54	174
MS.gene35611.t1	AT1G36060	51.244	201	75	6	6	205	134	312	3.60e-52	170
MS.gene35611.t1	AT4G39780	46.667	195	83	4	13	205	91	266	1.44e-50	165
MS.gene35611.t1	AT5G65130	46.860	207	62	8	9	205	107	275	1.21e-45	152
MS.gene35611.t1	AT5G65130	46.860	207	62	8	9	205	105	273	1.66e-45	152
MS.gene35611.t1	AT4G13620	81.159	69	13	0	8	76	225	293	3.68e-37	133
MS.gene35611.t1	AT2G20880	85.484	62	9	0	12	73	184	245	1.06e-32	120
MS.gene35611.t1	AT1G64380	56.800	125	47	2	6	129	127	245	3.15e-30	114
MS.gene35611.t1	AT4G28140	80.000	60	12	0	12	71	140	199	9.50e-29	109
MS.gene35611.t1	AT3G16770	61.429	70	27	0	6	75	70	139	9.22e-25	97.8
MS.gene35611.t1	AT2G33710	75.439	57	14	0	15	71	70	126	1.49e-24	96.3
MS.gene35611.t1	AT2G33710	75.439	57	14	0	15	71	70	126	1.51e-24	96.7
MS.gene35611.t1	AT3G57600	61.538	78	30	0	15	92	28	105	1.44e-23	95.1
MS.gene35611.t1	AT5G13330	71.186	59	17	0	13	71	37	95	3.06e-23	92.8
MS.gene35611.t1	AT5G25390	49.474	95	45	1	12	103	4	98	6.64e-23	91.3
MS.gene35611.t1	AT4G11140	71.930	57	16	0	15	71	87	143	6.92e-23	93.6
MS.gene35611.t1	AT2G47520	67.213	61	20	0	14	74	49	109	8.82e-23	90.5
MS.gene35611.t1	AT5G25190	60.938	64	25	0	8	71	1	64	2.28e-22	89.7
MS.gene35611.t1	AT5G61890	65.152	66	23	0	13	78	88	153	3.57e-22	90.9
MS.gene35611.t1	AT4G27950	60.811	74	23	1	3	70	100	173	3.78e-22	92.4
MS.gene35611.t1	AT1G15360	66.667	60	20	0	12	71	4	63	3.86e-22	89.7
MS.gene35611.t1	AT1G15360	66.667	60	20	0	12	71	4	63	3.86e-22	89.7
MS.gene35611.t1	AT1G19210	58.209	67	28	0	6	72	3	69	6.64e-22	88.6
MS.gene35611.t1	AT1G71450	41.525	118	60	1	15	132	24	132	1.02e-21	88.2
MS.gene35611.t1	AT5G21960	67.241	58	19	0	15	72	7	64	1.84e-21	88.2
MS.gene35611.t1	AT4G17500	65.152	66	22	1	13	77	146	211	2.11e-21	89.4
MS.gene35611.t1	AT3G11020	64.286	70	19	1	15	84	78	141	2.19e-21	90.1
MS.gene35611.t1	AT1G46768	62.500	64	24	0	13	76	29	92	2.25e-21	86.3
MS.gene35611.t1	AT1G46768	62.500	64	24	0	13	76	29	92	2.25e-21	86.3
MS.gene35611.t1	AT2G46310	62.121	66	25	0	5	70	89	154	2.50e-21	89.4
MS.gene35611.t1	AT1G75490	71.930	57	16	0	15	71	42	98	2.67e-21	87.8
MS.gene35611.t1	AT1G46768	62.500	64	24	0	13	76	29	92	2.74e-21	85.9
MS.gene35611.t1	AT2G23340	35.256	156	91	3	6	151	19	174	3.41e-21	86.7
MS.gene35611.t1	AT5G53290	65.625	64	22	0	7	70	117	180	5.20e-21	89.4
MS.gene35611.t1	AT4G36900	58.209	67	28	0	7	73	22	88	5.93e-21	86.7
MS.gene35611.t1	AT5G47220	70.000	60	17	1	13	71	115	174	7.54e-21	87.4
MS.gene35611.t1	AT2G35700	38.636	132	64	2	15	140	45	165	9.52e-21	85.9
MS.gene35611.t1	AT3G23230	69.492	59	17	1	15	72	20	78	9.54e-21	84.3
MS.gene35611.t1	AT2G40340	62.500	64	24	0	15	78	14	77	9.59e-21	87.8
MS.gene35611.t1	AT2G40340	62.500	64	24	0	15	78	14	77	9.59e-21	87.8
MS.gene35611.t1	AT2G40340	62.500	64	24	0	15	78	14	77	9.59e-21	87.8
MS.gene35611.t1	AT4G06746	59.375	64	26	0	8	71	29	92	9.95e-21	84.7
MS.gene35611.t1	AT5G67190	60.938	64	25	0	10	73	16	79	1.12e-20	85.5
MS.gene35611.t1	AT1G74930	62.069	58	22	0	15	72	21	78	1.20e-20	85.5
MS.gene35611.t1	AT2G44840	65.000	60	20	1	15	73	92	151	1.48e-20	86.3
MS.gene35611.t1	AT5G05410	70.175	57	17	0	15	71	79	135	1.53e-20	87.4
MS.gene35611.t1	AT5G25390	48.421	95	43	2	12	103	4	95	1.54e-20	85.1
MS.gene35611.t1	AT5G43410	55.556	81	35	1	1	80	1	81	1.69e-20	83.6
MS.gene35611.t1	AT2G40340	62.500	64	24	0	15	78	72	135	1.71e-20	87.4
MS.gene35611.t1	AT2G40340	62.500	64	24	0	15	78	72	135	2.06e-20	87.8
MS.gene35611.t1	AT2G40340	62.500	64	24	0	15	78	79	142	2.30e-20	87.8
MS.gene35611.t1	AT5G05410	70.175	57	17	0	15	71	79	135	2.87e-20	87.4
MS.gene35611.t1	AT3G15210	64.407	59	21	0	15	73	25	83	3.67e-20	85.1
MS.gene35611.t1	AT3G61630	65.625	64	22	0	7	70	97	160	4.71e-20	86.3
MS.gene35611.t1	AT3G50260	40.952	105	62	0	15	119	21	125	4.79e-20	82.8
MS.gene35611.t1	AT1G72360	55.405	74	29	1	3	72	60	133	5.04e-20	85.5
MS.gene35611.t1	AT5G47230	64.286	70	19	2	8	71	144	213	5.89e-20	85.9
MS.gene35611.t1	AT3G16280	61.667	60	23	0	14	73	60	119	6.24e-20	84.7
MS.gene35611.t1	AT5G18450	62.857	70	25	1	1	70	21	89	7.49e-20	85.9
MS.gene35611.t1	AT3G16280	61.667	60	23	0	14	73	78	137	8.59e-20	84.7
MS.gene35611.t1	AT4G23750	67.241	58	19	0	13	70	120	177	1.05e-19	85.9
MS.gene35611.t1	AT4G23750	67.241	58	19	0	13	70	120	177	1.05e-19	85.9
MS.gene35611.t1	AT4G31060	37.500	152	76	6	13	153	25	168	1.15e-19	82.8
MS.gene35611.t1	AT1G71130	63.235	68	20	1	8	70	72	139	1.24e-19	82.0
MS.gene35611.t1	AT5G51190	68.966	58	17	1	15	71	72	129	2.00e-19	83.2
MS.gene35611.t1	AT5G44210	64.912	57	20	0	15	71	33	89	2.33e-19	82.4
MS.gene35611.t1	AT4G32800	60.000	60	24	0	14	73	18	77	2.54e-19	82.8
MS.gene35611.t1	AT1G72360	58.730	63	26	0	10	72	20	82	3.02e-19	82.4
MS.gene35611.t1	AT1G28360	67.241	58	19	0	15	72	12	69	3.51e-19	81.6
MS.gene35611.t1	AT1G72360	58.730	63	26	0	10	72	69	131	4.40e-19	82.8
MS.gene35611.t1	AT5G11590	60.000	60	24	0	14	73	50	109	4.69e-19	82.4
MS.gene35611.t1	AT4G16750	48.193	83	32	1	15	97	40	111	4.89e-19	80.9
MS.gene35611.t1	AT2G44940	54.167	72	31	1	2	73	89	158	5.60e-19	83.2
MS.gene35611.t1	AT5G25810	48.810	84	32	2	14	97	35	107	6.27e-19	81.6
MS.gene35611.t1	AT2G25820	49.383	81	30	1	14	94	25	94	6.56e-19	81.6
MS.gene35611.t1	AT3G23240	56.757	74	31	1	7	79	74	147	7.03e-19	81.6
MS.gene35611.t1	AT1G03800	53.425	73	33	1	5	77	44	115	7.07e-19	82.0
MS.gene35611.t1	AT3G20310	59.701	67	25	1	5	71	19	83	7.56e-19	82.0
MS.gene35611.t1	AT5G18560	39.716	141	62	6	15	138	55	189	1.08e-18	83.2
MS.gene35611.t1	AT5G13910	64.286	56	20	0	15	70	20	75	1.25e-18	80.9
MS.gene35611.t1	AT2G31230	65.517	58	19	1	15	71	86	143	1.47e-18	81.3
MS.gene35611.t1	AT1G28160	66.071	56	19	0	15	70	39	94	1.49e-18	81.3
MS.gene35611.t1	AT1G28370	63.158	57	21	0	15	71	20	76	2.29e-18	79.0
MS.gene35611.t1	AT4G17490	68.966	58	17	1	15	71	137	194	2.63e-18	81.3
MS.gene35611.t1	AT1G01250	58.621	58	24	0	14	71	44	101	3.83e-18	79.0
MS.gene35611.t1	AT3G60490	59.322	59	24	0	15	73	71	129	4.60e-18	80.1
MS.gene35611.t1	AT2G36450	63.333	60	21	1	14	72	14	73	4.94e-18	78.6
MS.gene35611.t1	AT1G28370	63.158	57	21	0	15	71	58	114	5.07e-18	79.0
MS.gene35611.t1	AT1G12980	58.209	67	27	1	4	70	47	112	5.14e-18	80.9
MS.gene35611.t1	AT2G40350	62.712	59	22	0	15	73	74	132	5.41e-18	77.8
MS.gene35611.t1	AT2G40350	62.712	59	22	0	15	73	67	125	6.54e-18	77.4
MS.gene35611.t1	AT4G25490	64.912	57	20	0	14	70	47	103	6.81e-18	79.0
MS.gene35611.t1	AT4G25470	62.712	59	22	0	14	72	50	108	7.49e-18	78.6
MS.gene35611.t1	AT1G21910	59.649	57	23	0	15	71	50	106	1.13e-17	78.6
MS.gene35611.t1	AT5G61600	63.793	58	20	1	15	71	88	145	1.30e-17	78.6
MS.gene35611.t1	AT1G24590	64.407	59	21	0	12	70	55	113	1.78e-17	79.3
MS.gene35611.t1	AT1G71520	55.556	63	24	1	15	73	14	76	2.24e-17	75.9
MS.gene35611.t1	AT1G50640	57.353	68	27	1	4	71	19	84	3.07e-17	77.4
MS.gene35611.t1	AT4G25480	61.017	59	23	0	14	72	50	108	3.17e-17	77.0
MS.gene35611.t1	AT1G22810	55.738	61	25	1	15	73	14	74	3.22e-17	75.5
MS.gene35611.t1	AT4G18450	60.656	61	23	1	4	63	99	159	1.59e-16	76.6
MS.gene35611.t1	AT5G51990	61.404	57	22	0	14	70	53	109	1.63e-16	75.5
MS.gene35611.t1	AT1G22985	62.295	61	20	1	13	70	73	133	1.73e-16	73.9
MS.gene35611.t1	AT1G12890	60.714	56	22	0	15	70	21	76	3.05e-16	74.3
MS.gene35611.t1	AT5G07580	60.656	61	23	1	12	71	107	167	4.12e-16	73.9
MS.gene35611.t1	AT5G19790	62.069	58	22	0	15	72	22	79	5.13e-16	74.3
MS.gene35611.t1	AT4G34410	63.077	65	24	0	15	79	136	200	1.06e-15	73.9
MS.gene35611.t1	AT1G43160	66.154	65	21	1	7	71	54	117	2.15e-15	71.6
MS.gene35611.t1	AT5G07310	67.797	59	19	0	13	71	90	148	4.08e-15	72.0
MS.gene35611.t1	AT5G50080	67.797	59	19	0	13	71	84	142	5.41e-15	71.2
MS.gene35611.t1	AT5G50080	67.797	59	19	0	13	71	75	133	6.75e-15	70.9
MS.gene35611.t1	AT5G64750	62.963	54	19	1	22	74	192	245	7.89e-15	72.4
MS.gene35611.t1	AT1G68550	62.295	61	21	1	4	64	102	160	9.06e-15	72.0
MS.gene35611.t1	AT1G68550	62.295	61	21	1	4	64	102	160	9.06e-15	72.0
MS.gene35611.t1	AT1G77200	61.017	59	23	0	15	73	43	101	1.04e-14	70.9
MS.gene35611.t1	AT5G11190	46.392	97	47	2	15	106	7	103	1.56e-14	69.3
MS.gene35611.t1	AT2G38340	58.108	74	23	1	6	71	61	134	1.58e-14	70.1
MS.gene35611.t1	AT1G33760	45.631	103	46	1	15	117	20	112	4.01e-14	68.2
MS.gene35611.t1	AT1G12610	49.296	71	34	1	2	70	15	85	4.64e-14	68.6
MS.gene35611.t1	AT1G63030	49.296	71	34	1	2	70	15	85	7.81e-14	67.4
MS.gene35611.t1	AT1G63030	49.296	71	34	1	2	70	15	85	7.81e-14	67.4
MS.gene35611.t1	AT2G40220	71.429	56	16	0	15	70	55	110	1.06e-13	68.9
MS.gene35611.t1	AT1G77640	59.016	61	25	0	13	73	41	101	8.89e-13	65.5
MS.gene35611.t1	AT3G14230	65.574	61	21	0	15	75	123	183	4.71e-12	64.3
MS.gene35611.t1	AT3G14230	65.574	61	21	0	15	75	124	184	4.72e-12	64.3
MS.gene35611.t1	AT3G14230	65.574	61	21	0	15	75	128	188	5.56e-12	64.3
MS.gene35611.t1	AT1G06160	65.000	60	20	1	13	71	80	139	8.41e-12	62.8
MS.gene35611.t1	AT1G53170	56.716	67	23	1	15	81	31	91	1.11e-11	61.6
MS.gene35611.t1	AT3G25890	56.897	58	19	2	7	64	127	178	1.29e-11	62.8
MS.gene35611.t1	AT3G25890	56.897	58	19	2	7	64	127	178	1.29e-11	62.8
MS.gene35611.t1	AT1G04370	61.538	65	24	1	15	78	20	84	1.79e-11	59.7
MS.gene35611.t1	AT1G53910	66.667	57	19	0	15	71	125	181	2.01e-11	62.4
MS.gene35611.t1	AT1G53910	66.667	57	19	0	15	71	125	181	2.01e-11	62.4
MS.gene35611.t1	AT1G53910	66.667	57	19	0	15	71	123	179	2.10e-11	62.4
MS.gene35611.t1	AT5G61590	62.295	61	22	1	12	71	104	164	2.92e-11	60.5
MS.gene35611.t1	AT3G23220	61.017	59	22	1	15	72	14	72	4.05e-11	58.9

Find 59 sgRNAs with CRISPR-Local

Find 57 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAACCTTGGTGTTTCAAATT+TGG	0.125662	3.3:-63944980	None:intergenic
AAACACCAAGGTTCAATTAT+TGG	0.192299	3.3:+63944989	MS.gene35611:CDS
CATAACCTTGTTCGGTTCTT+AGG	0.198335	3.3:-63944866	None:intergenic
CCACTTTCTGATCTTACTTT+TGG	0.243386	3.3:+63945274	MS.gene35611:CDS
CGCTTCTAAGGTGGTTTCTA+AGG	0.249824	3.3:+63945150	MS.gene35611:CDS
TCAATTATTGGTGGTGAATT+TGG	0.266271	3.3:+63945001	MS.gene35611:CDS
GACAAAGGCACTGGGGAAAA+TGG	0.284535	3.3:+63944825	MS.gene35611:CDS
CACAGCTGAAGAAGCTGCTT+TGG	0.295262	3.3:+63944904	MS.gene35611:CDS
ACCCTTCTTATGAGATTGAT+TGG	0.323485	3.3:+63945353	MS.gene35611:CDS
CACTCCTCTGTATAGCTTTG+TGG	0.325054	3.3:-63944801	None:intergenic
ACTCCTCTGTATAGCTTTGT+GGG	0.345722	3.3:-63944800	None:intergenic
GAAGTCGAAAGCCGCTTCTA+AGG	0.367501	3.3:+63945138	MS.gene35611:CDS
TTTAGCTGAGATGCAGAAAC+AGG	0.382190	3.3:+63945081	MS.gene35611:CDS
TTGTAAGGTTGAAGCAGTTT+CGG	0.399604	3.3:+63945216	MS.gene35611:CDS
TTCGATGCCGGCGTCTTCTT+CGG	0.410941	3.3:-63945118	None:intergenic
CTAAGAACCGAACAAGGTTA+TGG	0.419772	3.3:+63944867	MS.gene35611:CDS
CCCTTCTTATGAGATTGATT+GGG	0.440117	3.3:+63945354	MS.gene35611:CDS
GTCTGTTGATGATTTGAAGA+AGG	0.443769	3.3:+63945174	MS.gene35611:CDS
TACCAAGCCATAACCTTGTT+CGG	0.447712	3.3:-63944874	None:intergenic
AGAGCCAGAGGAGTGTTGTA+AGG	0.456283	3.3:+63945201	MS.gene35611:CDS
ACAAAGGCACTGGGGAAAAT+GGG	0.471083	3.3:+63944826	MS.gene35611:CDS
TCCCAATCAATCTCATAAGA+AGG	0.478799	3.3:-63945355	None:intergenic
GCGGCTTTCGACTTCGATGC+CGG	0.504434	3.3:-63945130	None:intergenic
CACCACCAATAATTGAACCT+TGG	0.527953	3.3:-63944994	None:intergenic
GAGGAGTGAGACAAAGGCAC+TGG	0.531370	3.3:+63944816	MS.gene35611:CDS
GTCAATTTCTATGAAGCATG+TGG	0.534142	3.3:+63944760	None:intergenic
AGCTTCTTCAGCTGTGTCAA+AGG	0.541181	3.3:-63944897	None:intergenic
AGCTTAGCATCAACAGAAGA+AGG	0.541694	3.3:-63945040	None:intergenic
AGCTACGTGGTGACTTTGCA+AGG	0.545971	3.3:+63944948	MS.gene35611:CDS
AAGCTTCAAGCTATTTGTGA+AGG	0.548878	3.3:+63945058	MS.gene35611:CDS
TCAACCTTACAACACTCCTC+TGG	0.550117	3.3:-63945205	None:intergenic
AGGAGTGAGACAAAGGCACT+GGG	0.557612	3.3:+63944817	MS.gene35611:CDS
GTCGAAAGCCGCTTCTAAGG+TGG	0.560573	3.3:+63945141	MS.gene35611:CDS
CCCAATCAATCTCATAAGAA+GGG	0.561445	3.3:-63945354	None:intergenic
GCATCAACAGAAGAAGGAAG+AGG	0.563829	3.3:-63945034	None:intergenic
GAAGAAGGATTCAGAGCCAG+AGG	0.565926	3.3:+63945189	MS.gene35611:CDS
ACTGAGAGTGAAGGTTCTGA+AGG	0.574770	3.3:+63945244	MS.gene35611:CDS
CACCAAGGTTCAATTATTGG+TGG	0.582649	3.3:+63944992	MS.gene35611:CDS
AACCGAACAAGGTTATGGCT+TGG	0.584727	3.3:+63944872	MS.gene35611:CDS
TATACAGAGGAGTGAGACAA+AGG	0.585168	3.3:+63944810	MS.gene35611:CDS
CTTAGAAACCACCTTAGAAG+CGG	0.586662	3.3:-63945149	None:intergenic
TGTTGGTGAGCCACAGTGGG+AGG	0.587402	3.3:+63945300	MS.gene35611:CDS
CCAAAAGTAAGATCAGAAAG+TGG	0.594128	3.3:-63945274	None:intergenic
TTTCCAAATTTGAAACACCA+AGG	0.597546	3.3:+63944977	MS.gene35611:CDS
TCGGTGATTACTGAGAGTGA+AGG	0.602246	3.3:+63945235	MS.gene35611:CDS
AGAGAAGCCGAAGAAGACGC+CGG	0.606853	3.3:+63945111	MS.gene35611:CDS
GACTACCTAAGAACCGAACA+AGG	0.621436	3.3:+63944861	MS.gene35611:CDS
TCAATTTCTATGAAGCATGT+GGG	0.632880	3.3:+63944761	None:intergenic
TTAGCTGAGATGCAGAAACA+GGG	0.637834	3.3:+63945082	MS.gene35611:CDS
TGATGTTGGTGAGCCACAGT+GGG	0.640457	3.3:+63945297	MS.gene35611:CDS
TGAGATGCAGAAACAGGGGA+AGG	0.648958	3.3:+63945087	MS.gene35611:CDS
GTTGGTGAGCCACAGTGGGA+GGG	0.654158	3.3:+63945301	MS.gene35611:CDS
TCTGAATCACCCTCCCACTG+TGG	0.654829	3.3:-63945310	None:intergenic
ATTTCTATGAAGCATGTGGG+TGG	0.665389	3.3:+63944764	None:intergenic
GTGATGTTGGTGAGCCACAG+TGG	0.665421	3.3:+63945296	MS.gene35611:CDS
TAGCTGAGATGCAGAAACAG+GGG	0.700327	3.3:+63945083	MS.gene35611:CDS
AAACCCACAAAGCTATACAG+AGG	0.701332	3.3:+63944797	MS.gene35611:CDS
GGAGTGAGACAAAGGCACTG+GGG	0.768565	3.3:+63944818	MS.gene35611:CDS
AAAGCTGCTTATAAGCTACG+TGG	0.774181	3.3:+63944935	MS.gene35611:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AAACACCAAGGTTCAATTAT+TGG	+	chr3.3:63944989-63945008	MS.gene35611:CDS	30.0%
!	TTTCCAAATTTGAAACACCA+AGG	+	chr3.3:63944977-63944996	MS.gene35611:CDS	30.0%
!!	TCAATTATTGGTGGTGAATT+TGG	+	chr3.3:63945001-63945020	MS.gene35611:CDS	30.0%
	AAGCTTCAAGCTATTTGTGA+AGG	+	chr3.3:63945058-63945077	MS.gene35611:CDS	35.0%
	ACCCTTCTTATGAGATTGAT+TGG	+	chr3.3:63945353-63945372	MS.gene35611:CDS	35.0%
	CCAAAAGTAAGATCAGAAAG+TGG	-	chr3.3:63945277-63945296	None:intergenic	35.0%
	CCCAATCAATCTCATAAGAA+GGG	-	chr3.3:63945357-63945376	None:intergenic	35.0%
	CCCTTCTTATGAGATTGATT+GGG	+	chr3.3:63945354-63945373	MS.gene35611:CDS	35.0%
	TCCCAATCAATCTCATAAGA+AGG	-	chr3.3:63945358-63945377	None:intergenic	35.0%
	TTGTAAGGTTGAAGCAGTTT+CGG	+	chr3.3:63945216-63945235	MS.gene35611:CDS	35.0%
!	CCACTTTCTGATCTTACTTT+TGG	+	chr3.3:63945274-63945293	MS.gene35611:CDS	35.0%
!!	GAACCTTGGTGTTTCAAATT+TGG	-	chr3.3:63944983-63945002	None:intergenic	35.0%
!!	GTCTGTTGATGATTTGAAGA+AGG	+	chr3.3:63945174-63945193	MS.gene35611:CDS	35.0%
!!!	GATCTTACTTTTGGTGATGT+TGG	+	chr3.3:63945283-63945302	MS.gene35611:CDS	35.0%
	AAACCCACAAAGCTATACAG+AGG	+	chr3.3:63944797-63944816	MS.gene35611:CDS	40.0%
	AAAGCTGCTTATAAGCTACG+TGG	+	chr3.3:63944935-63944954	MS.gene35611:CDS	40.0%
	AGCTTAGCATCAACAGAAGA+AGG	-	chr3.3:63945043-63945062	None:intergenic	40.0%
	CACCAAGGTTCAATTATTGG+TGG	+	chr3.3:63944992-63945011	MS.gene35611:CDS	40.0%
	CACCACCAATAATTGAACCT+TGG	-	chr3.3:63944997-63945016	None:intergenic	40.0%
	CATAACCTTGTTCGGTTCTT+AGG	-	chr3.3:63944869-63944888	None:intergenic	40.0%
	CTAAGAACCGAACAAGGTTA+TGG	+	chr3.3:63944867-63944886	MS.gene35611:CDS	40.0%
	CTTAGAAACCACCTTAGAAG+CGG	-	chr3.3:63945152-63945171	None:intergenic	40.0%
	TACCAAGCCATAACCTTGTT+CGG	-	chr3.3:63944877-63944896	None:intergenic	40.0%
	TATACAGAGGAGTGAGACAA+AGG	+	chr3.3:63944810-63944829	MS.gene35611:CDS	40.0%
	TTAGCTGAGATGCAGAAACA+GGG	+	chr3.3:63945082-63945101	MS.gene35611:CDS	40.0%
	TTTAGCTGAGATGCAGAAAC+AGG	+	chr3.3:63945081-63945100	MS.gene35611:CDS	40.0%
!!	ACTCCTCTGTATAGCTTTGT+GGG	-	chr3.3:63944803-63944822	None:intergenic	40.0%
	AACCGAACAAGGTTATGGCT+TGG	+	chr3.3:63944872-63944891	MS.gene35611:CDS	45.0%
	AGCTTCTTCAGCTGTGTCAA+AGG	-	chr3.3:63944900-63944919	None:intergenic	45.0%
	GACTACCTAAGAACCGAACA+AGG	+	chr3.3:63944861-63944880	MS.gene35611:CDS	45.0%
	GCATCAACAGAAGAAGGAAG+AGG	-	chr3.3:63945037-63945056	None:intergenic	45.0%
	TAGCTGAGATGCAGAAACAG+GGG	+	chr3.3:63945083-63945102	MS.gene35611:CDS	45.0%
	TCAACCTTACAACACTCCTC+TGG	-	chr3.3:63945208-63945227	None:intergenic	45.0%
	TCGGTGATTACTGAGAGTGA+AGG	+	chr3.3:63945235-63945254	MS.gene35611:CDS	45.0%
!	ACTGAGAGTGAAGGTTCTGA+AGG	+	chr3.3:63945244-63945263	MS.gene35611:CDS	45.0%
!	CACTCCTCTGTATAGCTTTG+TGG	-	chr3.3:63944804-63944823	None:intergenic	45.0%
!!	ACAAAGGCACTGGGGAAAAT+GGG	+	chr3.3:63944826-63944845	MS.gene35611:CDS	45.0%
!!	CGCTTCTAAGGTGGTTTCTA+AGG	+	chr3.3:63945150-63945169	MS.gene35611:CDS	45.0%
	AGCTACGTGGTGACTTTGCA+AGG	+	chr3.3:63944948-63944967	MS.gene35611:CDS	50.0%
	CACAGCTGAAGAAGCTGCTT+TGG	+	chr3.3:63944904-63944923	MS.gene35611:CDS	50.0%
	GAAGAAGGATTCAGAGCCAG+AGG	+	chr3.3:63945189-63945208	MS.gene35611:CDS	50.0%
	GAAGTCGAAAGCCGCTTCTA+AGG	+	chr3.3:63945138-63945157	MS.gene35611:CDS	50.0%
	TGAGATGCAGAAACAGGGGA+AGG	+	chr3.3:63945087-63945106	MS.gene35611:CDS	50.0%
!	TGATGTTGGTGAGCCACAGT+GGG	+	chr3.3:63945297-63945316	MS.gene35611:CDS	50.0%
!!	AGAGCCAGAGGAGTGTTGTA+AGG	+	chr3.3:63945201-63945220	MS.gene35611:CDS	50.0%
!!	AGGAGTGAGACAAAGGCACT+GGG	+	chr3.3:63944817-63944836	MS.gene35611:CDS	50.0%
!!	GACAAAGGCACTGGGGAAAA+TGG	+	chr3.3:63944825-63944844	MS.gene35611:CDS	50.0%
	AGAGAAGCCGAAGAAGACGC+CGG	+	chr3.3:63945111-63945130	MS.gene35611:CDS	55.0%
	TCTGAATCACCCTCCCACTG+TGG	-	chr3.3:63945313-63945332	None:intergenic	55.0%
	TTCGATGCCGGCGTCTTCTT+CGG	-	chr3.3:63945121-63945140	None:intergenic	55.0%
!	GAGGAGTGAGACAAAGGCAC+TGG	+	chr3.3:63944816-63944835	MS.gene35611:CDS	55.0%
!	GTCGAAAGCCGCTTCTAAGG+TGG	+	chr3.3:63945141-63945160	MS.gene35611:CDS	55.0%
!	GTGATGTTGGTGAGCCACAG+TGG	+	chr3.3:63945296-63945315	MS.gene35611:CDS	55.0%
!!	GGAGTGAGACAAAGGCACTG+GGG	+	chr3.3:63944818-63944837	MS.gene35611:CDS	55.0%
	GCGGCTTTCGACTTCGATGC+CGG	-	chr3.3:63945133-63945152	None:intergenic	60.0%
!	GTTGGTGAGCCACAGTGGGA+GGG	+	chr3.3:63945301-63945320	MS.gene35611:CDS	60.0%
!	TGTTGGTGAGCCACAGTGGG+AGG	+	chr3.3:63945300-63945319	MS.gene35611:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.3	gene	63944770	63945387	63944770	ID=MS.gene35611
chr3.3	mRNA	63944770	63945387	63944770	ID=MS.gene35611.t1;Parent=MS.gene35611
chr3.3	exon	63944770	63945387	63944770	ID=MS.gene35611.t1.exon1;Parent=MS.gene35611.t1
chr3.3	CDS	63944770	63945387	63944770	ID=cds.MS.gene35611.t1;Parent=MS.gene35611.t1

Gene Sequence

>MS.gene35611

ATGAAGCATGTGGGTGGTAGTGTTTCAAAACCCACAAAGCTATACAGAGGAGTGAGACAAAGGCACTGGGGAAAATGGGTTGCTGAGATAAGACTACCTAAGAACCGAACAAGGTTATGGCTTGGTACCTTTGACACAGCTGAAGAAGCTGCTTTGGCTTATGATAAAGCTGCTTATAAGCTACGTGGTGACTTTGCAAGGCTAAATTTTCCAAATTTGAAACACCAAGGTTCAATTATTGGTGGTGAATTTGGTGAGTTTAAGCCTCTTCCTTCTTCTGTTGATGCTAAGCTTCAAGCTATTTGTGAAGGTTTAGCTGAGATGCAGAAACAGGGGAAGGCAGAGAAGCCGAAGAAGACGCCGGCATCGAAGTCGAAAGCCGCTTCTAAGGTGGTTTCTAAGGAGTCTGTTGATGATTTGAAGAAGGATTCAGAGCCAGAGGAGTGTTGTAAGGTTGAAGCAGTTTCGGTGATTACTGAGAGTGAAGGTTCTGAAGGTTCTTCACCACTTTCTGATCTTACTTTTGGTGATGTTGGTGAGCCACAGTGGGAGGGTGATTCAGAAAATTTTAATTTGCTGAAGTACCCTTCTTATGAGATTGATTGGGATTCTCTGTGA

Protein sequence

>MS.gene35611.t1

MKHVGGSVSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLKHQGSIIGGEFGEFKPLPSSVDAKLQAICEGLAEMQKQGKAEKPKKTPASKSKAASKVVSKESVDDLKKDSEPEECCKVEAVSVITESEGSEGSSPLSDLTFGDVGEPQWEGDSENFNLLKYPSYEIDWDSL