Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67746.t1 | XP_013458801.1 | 99.2 | 364 | 3 | 0 | 76 | 439 | 167 | 530 | 8.00E-208 | 733 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67746.t1 | P36163 | 27.2 | 305 | 149 | 4 | 119 | 415 | 79 | 318 | 1.7e-28 | 128.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67746.t1 | A0A072UUV2 | 99.2 | 364 | 3 | 0 | 76 | 439 | 167 | 530 | 5.8e-208 | 733.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene67746 | 0.830202 | 3.35E-55 | -1.69E-46 |
| MS.gene049159 | MS.gene67746 | 0.83291 | 7.22E-56 | -1.69E-46 |
| MS.gene049254 | MS.gene67746 | 0.843209 | 1.61E-58 | -1.69E-46 |
| MS.gene049272 | MS.gene67746 | 0.806028 | 1.00E-49 | -1.69E-46 |
| MS.gene049343 | MS.gene67746 | 0.847997 | 8.12E-60 | -1.69E-46 |
| MS.gene049350 | MS.gene67746 | 0.810448 | 1.15E-50 | -1.69E-46 |
| MS.gene049404 | MS.gene67746 | 0.830835 | 2.35E-55 | -1.69E-46 |
| MS.gene049501 | MS.gene67746 | 0.821013 | 5.06E-53 | -1.69E-46 |
| MS.gene049711 | MS.gene67746 | 0.828769 | 7.48E-55 | -1.69E-46 |
| MS.gene049821 | MS.gene67746 | 0.804801 | 1.81E-49 | -1.69E-46 |
| MS.gene049825 | MS.gene67746 | 0.833622 | 4.80E-56 | -1.69E-46 |
| MS.gene049850 | MS.gene67746 | 0.853534 | 2.24E-61 | -1.69E-46 |
| MS.gene049873 | MS.gene67746 | 0.845077 | 5.09E-59 | -1.69E-46 |
| MS.gene050020 | MS.gene67746 | 0.801335 | 9.45E-49 | -1.69E-46 |
| MS.gene050026 | MS.gene67746 | 0.827951 | 1.18E-54 | -1.69E-46 |
| MS.gene050156 | MS.gene67746 | 0.867923 | 9.56E-66 | -1.69E-46 |
| MS.gene05016 | MS.gene67746 | 0.814276 | 1.67E-51 | -1.69E-46 |
| MS.gene050237 | MS.gene67746 | 0.815954 | 7.09E-52 | -1.69E-46 |
| MS.gene050251 | MS.gene67746 | 0.801284 | 9.68E-49 | -1.69E-46 |
| MS.gene050273 | MS.gene67746 | 0.80892 | 2.44E-50 | -1.69E-46 |
| MS.gene050355 | MS.gene67746 | 0.822225 | 2.65E-53 | -1.69E-46 |
| MS.gene05045 | MS.gene67746 | 0.816741 | 4.73E-52 | -1.69E-46 |
| MS.gene050559 | MS.gene67746 | 0.827112 | 1.87E-54 | -1.69E-46 |
| MS.gene050561 | MS.gene67746 | 0.827205 | 1.78E-54 | -1.69E-46 |
| MS.gene050562 | MS.gene67746 | 0.808506 | 3.00E-50 | -1.69E-46 |
| MS.gene050719 | MS.gene67746 | 0.819606 | 1.06E-52 | -1.69E-46 |
| MS.gene050721 | MS.gene67746 | 0.819934 | 8.95E-53 | -1.69E-46 |
| MS.gene050724 | MS.gene67746 | 0.811639 | 6.33E-51 | -1.69E-46 |
| MS.gene050799 | MS.gene67746 | 0.82827 | 9.87E-55 | -1.69E-46 |
| MS.gene050807 | MS.gene67746 | 0.816197 | 6.26E-52 | -1.69E-46 |
| MS.gene050844 | MS.gene67746 | 0.824749 | 6.82E-54 | -1.69E-46 |
| MS.gene051247 | MS.gene67746 | 0.857203 | 1.92E-62 | -1.69E-46 |
| MS.gene051265 | MS.gene67746 | 0.81829 | 2.12E-52 | -1.69E-46 |
| MS.gene051279 | MS.gene67746 | 0.80906 | 2.28E-50 | -1.69E-46 |
| MS.gene051328 | MS.gene67746 | 0.803752 | 3.00E-49 | -1.69E-46 |
| MS.gene05157 | MS.gene67746 | 0.803673 | 3.12E-49 | -1.69E-46 |
| MS.gene051594 | MS.gene67746 | 0.838369 | 3.00E-57 | -1.69E-46 |
| MS.gene051719 | MS.gene67746 | 0.881757 | 1.84E-70 | -1.69E-46 |
| MS.gene051720 | MS.gene67746 | 0.857211 | 1.90E-62 | -1.69E-46 |
| MS.gene051744 | MS.gene67746 | 0.840427 | 8.75E-58 | -1.69E-46 |
| MS.gene051957 | MS.gene67746 | 0.862336 | 5.45E-64 | -1.69E-46 |
| MS.gene052012 | MS.gene67746 | 0.814264 | 1.68E-51 | -1.69E-46 |
| MS.gene052020 | MS.gene67746 | 0.840619 | 7.80E-58 | -1.69E-46 |
| MS.gene052190 | MS.gene67746 | 0.845873 | 3.09E-59 | -1.69E-46 |
| MS.gene052208 | MS.gene67746 | 0.849916 | 2.38E-60 | -1.69E-46 |
| MS.gene052323 | MS.gene67746 | 0.812377 | 4.37E-51 | -1.69E-46 |
| MS.gene052358 | MS.gene67746 | -0.817328 | 3.49E-52 | -1.69E-46 |
| MS.gene052463 | MS.gene67746 | 0.816154 | 6.40E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene67746 | 0.867373 | 1.44E-65 | -1.69E-46 |
| MS.gene052519 | MS.gene67746 | 0.883957 | 2.89E-71 | -1.69E-46 |
| MS.gene052582 | MS.gene67746 | 0.823914 | 1.07E-53 | -1.69E-46 |
| MS.gene052584 | MS.gene67746 | 0.834072 | 3.70E-56 | -1.69E-46 |
| MS.gene052611 | MS.gene67746 | 0.857238 | 1.87E-62 | -1.69E-46 |
| MS.gene052612 | MS.gene67746 | 0.803231 | 3.85E-49 | -1.69E-46 |
| MS.gene052613 | MS.gene67746 | 0.825551 | 4.41E-54 | -1.69E-46 |
| MS.gene052773 | MS.gene67746 | 0.86715 | 1.69E-65 | -1.69E-46 |
| MS.gene052829 | MS.gene67746 | 0.812108 | 5.00E-51 | -1.69E-46 |
| MS.gene052843 | MS.gene67746 | 0.800777 | 1.23E-48 | -1.69E-46 |
| MS.gene052863 | MS.gene67746 | 0.881754 | 1.85E-70 | -1.69E-46 |
| MS.gene052867 | MS.gene67746 | 0.804109 | 2.53E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene67746 | 0.840884 | 6.64E-58 | -1.69E-46 |
| MS.gene053006 | MS.gene67746 | 0.814877 | 1.23E-51 | -1.69E-46 |
| MS.gene053008 | MS.gene67746 | 0.839694 | 1.36E-57 | -1.69E-46 |
| MS.gene053144 | MS.gene67746 | 0.810335 | 1.21E-50 | -1.69E-46 |
| MS.gene053145 | MS.gene67746 | 0.852208 | 5.37E-61 | -1.69E-46 |
| MS.gene053146 | MS.gene67746 | 0.830369 | 3.05E-55 | -1.69E-46 |
| MS.gene053166 | MS.gene67746 | 0.819334 | 1.23E-52 | -1.69E-46 |
| MS.gene053202 | MS.gene67746 | 0.801124 | 1.04E-48 | -1.69E-46 |
| MS.gene053221 | MS.gene67746 | 0.82272 | 2.04E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene67746 | 0.88325 | 5.26E-71 | -1.69E-46 |
| MS.gene053396 | MS.gene67746 | 0.803801 | 2.93E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene67746 | 0.831127 | 1.99E-55 | -1.69E-46 |
| MS.gene053599 | MS.gene67746 | 0.848416 | 6.21E-60 | -1.69E-46 |
| MS.gene05364 | MS.gene67746 | 0.811359 | 7.28E-51 | -1.69E-46 |
| MS.gene053883 | MS.gene67746 | 0.827704 | 1.35E-54 | -1.69E-46 |
| MS.gene053900 | MS.gene67746 | 0.842465 | 2.54E-58 | -1.69E-46 |
| MS.gene053966 | MS.gene67746 | 0.834737 | 2.52E-56 | -1.69E-46 |
| MS.gene053967 | MS.gene67746 | 0.806493 | 8.01E-50 | -1.69E-46 |
| MS.gene053974 | MS.gene67746 | 0.800527 | 1.38E-48 | -1.69E-46 |
| MS.gene053995 | MS.gene67746 | 0.80446 | 2.14E-49 | -1.69E-46 |
| MS.gene053998 | MS.gene67746 | 0.84075 | 7.21E-58 | -1.69E-46 |
| MS.gene05414 | MS.gene67746 | 0.810145 | 1.33E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene67746 | 0.838264 | 3.19E-57 | -1.69E-46 |
| MS.gene054236 | MS.gene67746 | 0.829912 | 3.95E-55 | -1.69E-46 |
| MS.gene05423 | MS.gene67746 | 0.828813 | 7.30E-55 | -1.69E-46 |
| MS.gene054291 | MS.gene67746 | -0.807146 | 5.83E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene67746 | 0.823401 | 1.41E-53 | -1.69E-46 |
| MS.gene054468 | MS.gene67746 | 0.809964 | 1.46E-50 | -1.69E-46 |
| MS.gene054472 | MS.gene67746 | 0.83453 | 2.84E-56 | -1.69E-46 |
| MS.gene05447 | MS.gene67746 | 0.80937 | 1.96E-50 | -1.69E-46 |
| MS.gene054559 | MS.gene67746 | 0.820229 | 7.66E-53 | -1.69E-46 |
| MS.gene054582 | MS.gene67746 | 0.835957 | 1.24E-56 | -1.69E-46 |
| MS.gene05458 | MS.gene67746 | 0.825881 | 3.68E-54 | -1.69E-46 |
| MS.gene054651 | MS.gene67746 | 0.876901 | 9.66E-69 | -1.69E-46 |
| MS.gene054775 | MS.gene67746 | 0.843994 | 9.94E-59 | -1.69E-46 |
| MS.gene054991 | MS.gene67746 | 0.812486 | 4.14E-51 | -1.69E-46 |
| MS.gene055166 | MS.gene67746 | 0.806604 | 7.59E-50 | -1.69E-46 |
| MS.gene05517 | MS.gene67746 | 0.807763 | 4.31E-50 | -1.69E-46 |
| MS.gene055227 | MS.gene67746 | 0.834965 | 2.21E-56 | -1.69E-46 |
| MS.gene055356 | MS.gene67746 | 0.816139 | 6.45E-52 | -1.69E-46 |
| MS.gene055465 | MS.gene67746 | 0.834966 | 2.21E-56 | -1.69E-46 |
| MS.gene055466 | MS.gene67746 | 0.861746 | 8.26E-64 | -1.69E-46 |
| MS.gene055468 | MS.gene67746 | 0.832619 | 8.53E-56 | -1.69E-46 |
| MS.gene055512 | MS.gene67746 | 0.83813 | 3.45E-57 | -1.69E-46 |
| MS.gene055580 | MS.gene67746 | -0.80497 | 1.67E-49 | -1.69E-46 |
| MS.gene055589 | MS.gene67746 | 0.812759 | 3.61E-51 | -1.69E-46 |
| MS.gene055778 | MS.gene67746 | 0.862049 | 6.67E-64 | -1.69E-46 |
| MS.gene055818 | MS.gene67746 | 0.894229 | 3.00E-75 | -1.69E-46 |
| MS.gene055926 | MS.gene67746 | 0.806703 | 7.23E-50 | -1.69E-46 |
| MS.gene05604 | MS.gene67746 | 0.835537 | 1.58E-56 | -1.69E-46 |
| MS.gene056050 | MS.gene67746 | 0.840529 | 8.23E-58 | -1.69E-46 |
| MS.gene056173 | MS.gene67746 | 0.845883 | 3.08E-59 | -1.69E-46 |
| MS.gene056174 | MS.gene67746 | 0.825478 | 4.59E-54 | -1.69E-46 |
| MS.gene056308 | MS.gene67746 | 0.805414 | 1.35E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene67746 | 0.861463 | 1.01E-63 | -1.69E-46 |
| MS.gene056373 | MS.gene67746 | 0.816789 | 4.61E-52 | -1.69E-46 |
| MS.gene056498 | MS.gene67746 | 0.848128 | 7.46E-60 | -1.69E-46 |
| MS.gene056506 | MS.gene67746 | 0.802054 | 6.73E-49 | -1.69E-46 |
| MS.gene056542 | MS.gene67746 | 0.800193 | 1.62E-48 | -1.69E-46 |
| MS.gene056545 | MS.gene67746 | 0.807502 | 4.90E-50 | -1.69E-46 |
| MS.gene056553 | MS.gene67746 | 0.817842 | 2.67E-52 | -1.69E-46 |
| MS.gene056595 | MS.gene67746 | 0.848051 | 7.84E-60 | -1.69E-46 |
| MS.gene056642 | MS.gene67746 | 0.812491 | 4.13E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene67746 | 0.829282 | 5.62E-55 | -1.69E-46 |
| MS.gene05690 | MS.gene67746 | 0.836098 | 1.14E-56 | -1.69E-46 |
| MS.gene057026 | MS.gene67746 | 0.841027 | 6.10E-58 | -1.69E-46 |
| MS.gene057027 | MS.gene67746 | 0.809896 | 1.51E-50 | -1.69E-46 |
| MS.gene057060 | MS.gene67746 | 0.834193 | 3.45E-56 | -1.69E-46 |
| MS.gene057208 | MS.gene67746 | 0.82253 | 2.26E-53 | -1.69E-46 |
| MS.gene057314 | MS.gene67746 | 0.800326 | 1.52E-48 | -1.69E-46 |
| MS.gene057414 | MS.gene67746 | 0.825052 | 5.78E-54 | -1.69E-46 |
| MS.gene057444 | MS.gene67746 | 0.84645 | 2.16E-59 | -1.69E-46 |
| MS.gene057598 | MS.gene67746 | 0.809578 | 1.77E-50 | -1.69E-46 |
| MS.gene057693 | MS.gene67746 | 0.837702 | 4.45E-57 | -1.69E-46 |
| MS.gene057855 | MS.gene67746 | 0.82104 | 4.99E-53 | -1.69E-46 |
| MS.gene057915 | MS.gene67746 | 0.856411 | 3.28E-62 | -1.69E-46 |
| MS.gene057921 | MS.gene67746 | 0.807993 | 3.85E-50 | -1.69E-46 |
| MS.gene058008 | MS.gene67746 | 0.803782 | 2.96E-49 | -1.69E-46 |
| MS.gene058009 | MS.gene67746 | 0.827414 | 1.59E-54 | -1.69E-46 |
| MS.gene058010 | MS.gene67746 | 0.818005 | 2.46E-52 | -1.69E-46 |
| MS.gene058037 | MS.gene67746 | 0.851053 | 1.14E-60 | -1.69E-46 |
| MS.gene05847 | MS.gene67746 | 0.806677 | 7.32E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene67746 | 0.947368 | 7.70E-106 | -1.69E-46 |
| MS.gene058636 | MS.gene67746 | 0.83465 | 2.65E-56 | -1.69E-46 |
| MS.gene058783 | MS.gene67746 | 0.827437 | 1.57E-54 | -1.69E-46 |
| MS.gene058829 | MS.gene67746 | 0.851591 | 8.03E-61 | -1.69E-46 |
| MS.gene058979 | MS.gene67746 | 0.853547 | 2.22E-61 | -1.69E-46 |
| MS.gene059015 | MS.gene67746 | 0.834858 | 2.35E-56 | -1.69E-46 |
| MS.gene059272 | MS.gene67746 | 0.846002 | 2.85E-59 | -1.69E-46 |
| MS.gene05954 | MS.gene67746 | 0.838115 | 3.48E-57 | -1.69E-46 |
| MS.gene059625 | MS.gene67746 | 0.843916 | 1.04E-58 | -1.69E-46 |
| MS.gene059725 | MS.gene67746 | 0.801107 | 1.05E-48 | -1.69E-46 |
| MS.gene059789 | MS.gene67746 | 0.81097 | 8.84E-51 | -1.69E-46 |
| MS.gene059842 | MS.gene67746 | 0.840922 | 6.49E-58 | -1.69E-46 |
| MS.gene059937 | MS.gene67746 | 0.802292 | 6.01E-49 | -1.69E-46 |
| MS.gene060312 | MS.gene67746 | 0.813109 | 3.02E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene67746 | 0.858065 | 1.06E-62 | -1.69E-46 |
| MS.gene060352 | MS.gene67746 | 0.819699 | 1.01E-52 | -1.69E-46 |
| MS.gene060429 | MS.gene67746 | 0.814144 | 1.79E-51 | -1.69E-46 |
| MS.gene060519 | MS.gene67746 | 0.813922 | 2.00E-51 | -1.69E-46 |
| MS.gene060521 | MS.gene67746 | 0.836404 | 9.54E-57 | -1.69E-46 |
| MS.gene060572 | MS.gene67746 | 0.82227 | 2.59E-53 | -1.69E-46 |
| MS.gene060587 | MS.gene67746 | 0.825076 | 5.71E-54 | -1.69E-46 |
| MS.gene060689 | MS.gene67746 | 0.811481 | 6.85E-51 | -1.69E-46 |
| MS.gene060781 | MS.gene67746 | 0.814221 | 1.72E-51 | -1.69E-46 |
| MS.gene060803 | MS.gene67746 | 0.836266 | 1.04E-56 | -1.69E-46 |
| MS.gene061040 | MS.gene67746 | -0.808855 | 2.52E-50 | -1.69E-46 |
| MS.gene061163 | MS.gene67746 | 0.804005 | 2.66E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67746.t1 | MTR_3g006860 | 97.494 | 439 | 11 | 0 | 1 | 439 | 92 | 530 | 0.0 | 885 |
| MS.gene67746.t1 | MTR_6g463380 | 90.661 | 439 | 41 | 0 | 1 | 439 | 96 | 534 | 0.0 | 827 |
| MS.gene67746.t1 | MTR_6g463380 | 89.136 | 359 | 39 | 0 | 1 | 359 | 96 | 454 | 0.0 | 669 |
| MS.gene67746.t1 | MTR_6g463380 | 89.356 | 357 | 38 | 0 | 1 | 357 | 96 | 452 | 0.0 | 667 |
| MS.gene67746.t1 | MTR_6g079410 | 48.305 | 472 | 146 | 13 | 22 | 431 | 29 | 464 | 1.04e-128 | 380 |
| MS.gene67746.t1 | MTR_6g061650 | 53.799 | 329 | 103 | 8 | 109 | 433 | 32 | 315 | 4.09e-105 | 315 |
| MS.gene67746.t1 | MTR_6g006850 | 36.957 | 322 | 153 | 8 | 122 | 436 | 29 | 307 | 1.68e-55 | 186 |
| MS.gene67746.t1 | MTR_1g014390 | 46.701 | 197 | 75 | 3 | 237 | 430 | 119 | 288 | 6.09e-49 | 169 |
| MS.gene67746.t1 | MTR_6g006710 | 34.967 | 306 | 118 | 7 | 137 | 436 | 63 | 293 | 3.23e-45 | 159 |
| MS.gene67746.t1 | MTR_1g029560 | 41.667 | 204 | 94 | 5 | 239 | 436 | 18 | 202 | 1.52e-41 | 146 |
| MS.gene67746.t1 | MTR_1g012010 | 43.939 | 132 | 69 | 2 | 230 | 359 | 112 | 240 | 9.23e-26 | 105 |
| MS.gene67746.t1 | MTR_7g025575 | 60.227 | 88 | 28 | 2 | 358 | 439 | 13 | 99 | 5.41e-25 | 99.4 |
| MS.gene67746.t1 | MTR_1g012015 | 60.000 | 75 | 27 | 1 | 359 | 430 | 23 | 97 | 1.73e-24 | 97.4 |
| MS.gene67746.t1 | MTR_6g080120 | 68.000 | 50 | 14 | 1 | 358 | 407 | 1 | 48 | 1.45e-13 | 65.9 |
| MS.gene67746.t1 | MTR_6g079950 | 41.791 | 67 | 38 | 1 | 370 | 436 | 1 | 66 | 1.44e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67746.t1 | AT5G51740 | 60.000 | 400 | 151 | 6 | 44 | 439 | 48 | 442 | 4.61e-175 | 497 |
| MS.gene67746.t1 | AT5G51740 | 60.000 | 400 | 151 | 6 | 44 | 439 | 91 | 485 | 1.64e-174 | 498 |
| MS.gene67746.t1 | AT5G51740 | 55.975 | 318 | 133 | 4 | 43 | 357 | 90 | 403 | 1.70e-128 | 377 |
Find 102 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAAAATAATAAGAATATT+AGG | 0.145873 | 3.3:+3343619 | MS.gene67746:CDS |
| ATGAGATTCTTGATGATAAA+TGG | 0.146030 | 3.3:+3344306 | MS.gene67746:CDS |
| TGGATTGAATTGGGAGATTT+TGG | 0.167567 | 3.3:+3344391 | MS.gene67746:CDS |
| TCTCAAGGTTGTAACTTTAA+TGG | 0.172006 | 3.3:+3343648 | MS.gene67746:CDS |
| TTTCTAAGATATTAGATAAA+AGG | 0.183661 | 3.3:+3343691 | MS.gene67746:CDS |
| ATCCTCACTCTTACACTTTC+AGG | 0.212835 | 3.3:-3344110 | None:intergenic |
| GGATTCTGAAACCAATTCTT+TGG | 0.281604 | 3.3:-3343891 | None:intergenic |
| GCAGAGATAGCAACTATTAT+TGG | 0.282923 | 3.3:+3344503 | MS.gene67746:CDS |
| CTCAAGGTTGTAACTTTAAT+GGG | 0.283856 | 3.3:+3343649 | MS.gene67746:CDS |
| TTTGAGATTAATAAGAATAT+TGG | 0.285361 | 3.3:+3343717 | MS.gene67746:CDS |
| GGTTCAGAAGAGTAGGAAAA+AGG | 0.286020 | 3.3:+3344328 | MS.gene67746:CDS |
| CCATCCAAATGTGACGTATT+AGG | 0.286467 | 3.3:-3344371 | None:intergenic |
| ATCTTCTTCTCCATCTCTTT+CGG | 0.290022 | 3.3:-3344023 | None:intergenic |
| CACATTTGGATGGATTGAAT+TGG | 0.299543 | 3.3:+3344381 | MS.gene67746:CDS |
| AAATGTGTTCTCTTCGTATA+AGG | 0.304300 | 3.3:-3343990 | None:intergenic |
| CCCAACTTCTCGTAGACTTT+AGG | 0.315746 | 3.3:-3347686 | None:intergenic |
| GTAAAGGTGTTAGCTTTAAT+AGG | 0.316218 | 3.3:+3343748 | MS.gene67746:CDS |
| TGGGAAGATAGTTGTGTTTA+CGG | 0.319349 | 3.3:+3344454 | MS.gene67746:CDS |
| AACCAATTCTTTGGCCCTCT+TGG | 0.319495 | 3.3:-3343882 | None:intergenic |
| TGGTGTTGAAGGATTTCTTT+AGG | 0.322830 | 3.3:+3347844 | MS.gene67746:CDS |
| ACACTTTCAGGGTGCATTGC+AGG | 0.341748 | 3.3:-3344098 | None:intergenic |
| TTGAGATTAATAAGAATATT+GGG | 0.342471 | 3.3:+3343718 | MS.gene67746:CDS |
| TGAAAATAATAAGAATATTA+GGG | 0.346615 | 3.3:+3343620 | MS.gene67746:CDS |
| ATTGGTATAGTGGTTGGTTC+TGG | 0.359308 | 3.3:+3343927 | MS.gene67746:CDS |
| TACTGTGTTTGGTGAAGAAA+AGG | 0.364696 | 3.3:+3344217 | MS.gene67746:CDS |
| AGCCAAGAGGGCCAAAGAAT+TGG | 0.368828 | 3.3:+3343880 | MS.gene67746:CDS |
| AAGAAAACGAGCAGAATTAC+TGG | 0.372401 | 3.3:+3347763 | MS.gene67746:CDS |
| ATTTCAAGAGATTAGACAAC+GGG | 0.384753 | 3.3:+3343790 | MS.gene67746:CDS |
| AAGAGATGGAGAAGAAGATT+GGG | 0.386070 | 3.3:+3344027 | MS.gene67746:CDS |
| CATCCCCTCAGCACTGTGTC+TGG | 0.390785 | 3.3:-3344885 | None:intergenic |
| GAGGGAAAGTTGAAGGGAAT+TGG | 0.391132 | 3.3:+3344273 | MS.gene67746:CDS |
| TTCTAAGATATTAGATAAAA+GGG | 0.399166 | 3.3:+3343692 | MS.gene67746:CDS |
| CTATGTCATCACTTCTCTTA+CGG | 0.399194 | 3.3:+3344978 | MS.gene67746:CDS |
| GCTTCAGAAAATACTGTGTT+TGG | 0.401820 | 3.3:+3344206 | MS.gene67746:CDS |
| GGGAAGATAGTTGTGTTTAC+GGG | 0.403532 | 3.3:+3344455 | MS.gene67746:CDS |
| GACATAGTGTTGACAATATC+AGG | 0.403878 | 3.3:-3344962 | None:intergenic |
| TTTGAAGAGAGGGTTGAGTA+AGG | 0.405119 | 3.3:+3344157 | MS.gene67746:CDS |
| ACATTTGGATGGATTGAATT+GGG | 0.413686 | 3.3:+3344382 | MS.gene67746:CDS |
| ATTAATAAGAATATTGGGTT+GGG | 0.417432 | 3.3:+3343723 | MS.gene67746:CDS |
| GAGTTTGAGAAGATGAAGGC+AGG | 0.420112 | 3.3:+3344056 | MS.gene67746:CDS |
| AAAGAGATGGAGAAGAAGAT+TGG | 0.422292 | 3.3:+3344026 | MS.gene67746:CDS |
| AGAGAAGGACATGGTGTTGA+AGG | 0.427494 | 3.3:+3347833 | MS.gene67746:CDS |
| AGAATTGGTTTCAGAATCCT+AGG | 0.434255 | 3.3:+3343895 | MS.gene67746:CDS |
| GCAACCTAATACGTCACATT+TGG | 0.438474 | 3.3:+3344367 | MS.gene67746:CDS |
| TGAGATTCTTGATGATAAAT+GGG | 0.439908 | 3.3:+3344307 | MS.gene67746:CDS |
| GCATGTTATGATTGGTATAG+TGG | 0.453566 | 3.3:+3343917 | MS.gene67746:CDS |
| AATATTGGGTTGGGTTGTAA+AGG | 0.464328 | 3.3:+3343732 | MS.gene67746:CDS |
| ACCTAAAGTCTACGAGAAGT+TGG | 0.465177 | 3.3:+3347685 | MS.gene67746:CDS |
| TTGTTGAAGCTTTGAAGAGA+GGG | 0.466119 | 3.3:+3344147 | MS.gene67746:CDS |
| AATCCTAGGCATGTTATGAT+TGG | 0.472024 | 3.3:+3343909 | MS.gene67746:CDS |
| ACTGTGTTTGGTGAAGAAAA+GGG | 0.472337 | 3.3:+3344218 | MS.gene67746:CDS |
| ATCTAAAAGCTTAGAATCGC+CGG | 0.472748 | 3.3:-3347717 | None:intergenic |
| AGAATTACTGGCTCAAGCTC+AGG | 0.477979 | 3.3:+3347775 | MS.gene67746:CDS |
| TCCTCACTCTTACACTTTCA+GGG | 0.494164 | 3.3:-3344109 | None:intergenic |
| GATTAATAAGAATATTGGGT+TGG | 0.498993 | 3.3:+3343722 | MS.gene67746:CDS |
| GAAAGTGGAGGGAAAGTTGA+AGG | 0.499097 | 3.3:+3344266 | MS.gene67746:CDS |
| AATATTAGGGTTGGTTCTCA+AGG | 0.503963 | 3.3:+3343633 | MS.gene67746:CDS |
| CCTAATACGTCACATTTGGA+TGG | 0.504235 | 3.3:+3344371 | MS.gene67746:CDS |
| AATGATTACCTTCTGGAGAA+AGG | 0.507195 | 3.3:-3345004 | None:intergenic |
| ATTAGTGCATTGACTGAAAG+TGG | 0.507872 | 3.3:+3344251 | MS.gene67746:CDS |
| GTTATGATTGGTATAGTGGT+TGG | 0.507924 | 3.3:+3343921 | MS.gene67746:CDS |
| CCTAAAGTCTACGAGAAGTT+GGG | 0.509175 | 3.3:+3347686 | MS.gene67746:CDS |
| AATAATAAGAATATTAGGGT+TGG | 0.510133 | 3.3:+3343624 | MS.gene67746:CDS |
| AGGGGATGACAAAGAATATG+TGG | 0.517207 | 3.3:+3344900 | MS.gene67746:CDS |
| TTTGGTGGTGAATGATCCTA+TGG | 0.519554 | 3.3:+3344409 | MS.gene67746:CDS |
| TACGGCTTCCTTTCTCCAGA+AGG | 0.521905 | 3.3:+3344996 | MS.gene67746:CDS |
| GAGAGAGTTTGAGAAGATGA+AGG | 0.524062 | 3.3:+3344052 | MS.gene67746:CDS |
| ATAAATGGGTTCAGAAGAGT+AGG | 0.531439 | 3.3:+3344321 | MS.gene67746:CDS |
| CTTCCCACCAGGTAAGCAAA+AGG | 0.542507 | 3.3:-3344438 | None:intergenic |
| ATTGTTGAAGCTTTGAAGAG+AGG | 0.546244 | 3.3:+3344146 | MS.gene67746:CDS |
| AAGTTGAAGGGAATTGGCAT+CGG | 0.548246 | 3.3:+3344279 | MS.gene67746:CDS |
| AGTTGAAGGGAATTGGCATC+GGG | 0.552278 | 3.3:+3344280 | MS.gene67746:CDS |
| CTTCTATTAGTTGCATCCGC+CGG | 0.553436 | 3.3:+3347644 | MS.gene67746:CDS |
| AAGCAAAAGGCATTAACCAT+AGG | 0.561244 | 3.3:-3344425 | None:intergenic |
| AGAGATGGAGAAGAAGATTG+GGG | 0.562312 | 3.3:+3344028 | MS.gene67746:CDS |
| TGCCACACGTGGATCATAGC+CGG | 0.567918 | 3.3:-3347663 | None:intergenic |
| ATACCAATCATAACATGCCT+AGG | 0.568681 | 3.3:-3343912 | None:intergenic |
| GAAATTGAAGCTGATTACAT+TGG | 0.569179 | 3.3:+3347620 | MS.gene67746:CDS |
| GTGGCCAGACACAGTGCTGA+GGG | 0.570445 | 3.3:+3344881 | MS.gene67746:CDS |
| GGTTGAGTAAGGAGAATGTG+TGG | 0.571308 | 3.3:+3344168 | MS.gene67746:CDS |
| CTGTGTTTGGTGAAGAAAAG+GGG | 0.574536 | 3.3:+3344219 | MS.gene67746:CDS |
| ACTGGCTCAAGCTCAGGTGA+TGG | 0.577941 | 3.3:+3347781 | MS.gene67746:CDS |
| AGCAACTATTATTGGACATG+AGG | 0.602186 | 3.3:+3344511 | MS.gene67746:CDS |
| AAAGTGGAGGGAAAGTTGAA+GGG | 0.608573 | 3.3:+3344267 | MS.gene67746:CDS |
| AACACAACTATCTTCCCACC+AGG | 0.619918 | 3.3:-3344449 | None:intergenic |
| GTGCATTGACTGAAAGTGGA+GGG | 0.623353 | 3.3:+3344255 | MS.gene67746:CDS |
| ATATATAAGAATGTAAGAGA+AGG | 0.642352 | 3.3:+3347818 | MS.gene67746:CDS |
| GGGGATGACAAAGAATATGT+GGG | 0.650366 | 3.3:+3344901 | MS.gene67746:CDS |
| GTTTGGTGAAGAAAAGGGGA+AGG | 0.654958 | 3.3:+3344223 | MS.gene67746:CDS |
| TGTGGCCAGACACAGTGCTG+AGG | 0.662397 | 3.3:+3344880 | MS.gene67746:CDS |
| TAATTAGGTTGGACATGCTG+TGG | 0.665392 | 3.3:+3344862 | MS.gene67746:intron |
| CGCCGGCTATGATCCACGTG+TGG | 0.667943 | 3.3:+3347661 | MS.gene67746:CDS |
| ATGTGGATCCTCAAAATGTG+CGG | 0.671867 | 3.3:+3343850 | MS.gene67746:CDS |
| AGTGCATTGACTGAAAGTGG+AGG | 0.673147 | 3.3:+3344254 | MS.gene67746:CDS |
| TAGACTTTAGGTGCCACACG+TGG | 0.678929 | 3.3:-3347674 | None:intergenic |
| AAGAATGTAAGAGAAGGACA+TGG | 0.701425 | 3.3:+3347824 | MS.gene67746:CDS |
| TTCAAGAGATTAGACAACGG+GGG | 0.705844 | 3.3:+3343792 | MS.gene67746:CDS |
| TGGCCAGACACAGTGCTGAG+GGG | 0.712731 | 3.3:+3344882 | MS.gene67746:CDS |
| AATTTCAAGAGATTAGACAA+CGG | 0.714512 | 3.3:+3343789 | MS.gene67746:CDS |
| CACACGTGGATCATAGCCGG+CGG | 0.724278 | 3.3:-3347660 | None:intergenic |
| ACCCTGAAAGTGTAAGAGTG+AGG | 0.750161 | 3.3:+3344108 | MS.gene67746:CDS |
| TTTCAAGAGATTAGACAACG+GGG | 0.754786 | 3.3:+3343791 | MS.gene67746:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAAATAATAAGAATATTA+GGG | + | chr3.3:3343620-3343639 | MS.gene67746:CDS | 10.0% |
| !!! | AAAATGTACAAATTTAAAAT+TGG | - | chr3.3:3347190-3347209 | None:intergenic | 10.0% |
| !!! | AATTTTGATTTATCATATAT+TGG | + | chr3.3:3346708-3346727 | MS.gene67746:intron | 10.0% |
| !! | GTGAAAATAATAAGAATATT+AGG | + | chr3.3:3343619-3343638 | MS.gene67746:CDS | 15.0% |
| !! | TTGAGATTAATAAGAATATT+GGG | + | chr3.3:3343718-3343737 | MS.gene67746:CDS | 15.0% |
| !!! | ATAAATTTTACTTGAATTAG+TGG | + | chr3.3:3345188-3345207 | MS.gene67746:intron | 15.0% |
| !!! | ATAACAATGATAAGTTTTTA+TGG | - | chr3.3:3346793-3346812 | None:intergenic | 15.0% |
| !!! | TAAGATACTATTGATTAAAA+TGG | + | chr3.3:3345826-3345845 | MS.gene67746:intron | 15.0% |
| !!! | TTCTAAGATATTAGATAAAA+GGG | + | chr3.3:3343692-3343711 | MS.gene67746:CDS | 15.0% |
| !!! | TTTCTAAGATATTAGATAAA+AGG | + | chr3.3:3343691-3343710 | MS.gene67746:CDS | 15.0% |
| !!! | TTTGAGATTAATAAGAATAT+TGG | + | chr3.3:3343717-3343736 | MS.gene67746:CDS | 15.0% |
| !!! | TTTTTATAACTGTGTATTTT+GGG | + | chr3.3:3343952-3343971 | MS.gene67746:CDS | 15.0% |
| !! | AAATTACAATTCGTATTTAG+AGG | - | chr3.3:3346693-3346712 | None:intergenic | 20.0% |
| !! | AAGTGAAAAACATGAAATTA+GGG | + | chr3.3:3345156-3345175 | MS.gene67746:intron | 20.0% |
| !! | AATAATAAGAATATTAGGGT+TGG | + | chr3.3:3343624-3343643 | MS.gene67746:CDS | 20.0% |
| !! | ATATATAAGAATGTAAGAGA+AGG | + | chr3.3:3347818-3347837 | MS.gene67746:CDS | 20.0% |
| !! | ATTAATAAGAATATTGGGTT+GGG | + | chr3.3:3343723-3343742 | MS.gene67746:CDS | 20.0% |
| !! | CATATACAAATGAATTACAT+TGG | - | chr3.3:3347070-3347089 | None:intergenic | 20.0% |
| !! | GAACAAAACAAAAATTCAAT+TGG | - | chr3.3:3345050-3345069 | None:intergenic | 20.0% |
| !! | TAATTTACTATACACAAATG+TGG | + | chr3.3:3347512-3347531 | MS.gene67746:intron | 20.0% |
| !! | TATGAATACTTAAATGTTCT+TGG | + | chr3.3:3347086-3347105 | MS.gene67746:intron | 20.0% |
| !! | TGGTATTCTTGTATAAATTA+AGG | - | chr3.3:3346649-3346668 | None:intergenic | 20.0% |
| !!! | AAAAAAAAAAGGTTGCATTT+TGG | + | chr3.3:3345550-3345569 | MS.gene67746:intron | 20.0% |
| !!! | ATATATTTTCTCTTAAAGTG+TGG | - | chr3.3:3345743-3345762 | None:intergenic | 20.0% |
| !!! | ATTTTGGCCTTTTATTATTT+CGG | + | chr3.3:3345566-3345585 | MS.gene67746:intron | 20.0% |
| !!! | CAACCTTTTTTTTTTTCTTT+TGG | - | chr3.3:3345545-3345564 | None:intergenic | 20.0% |
| !!! | GTTTTTATAACTGTGTATTT+TGG | + | chr3.3:3343951-3343970 | MS.gene67746:CDS | 20.0% |
| !!! | TTGAAGTTAATACGAATTTT+AGG | + | chr3.3:3343817-3343836 | MS.gene67746:CDS | 20.0% |
| !!! | TTTGATTCGTTTAACTTATT+AGG | + | chr3.3:3344540-3344559 | MS.gene67746:intron | 20.0% |
| ! | AAATGAAGTTTCTTCTTAGA+GGG | - | chr3.3:3346392-3346411 | None:intergenic | 25.0% |
| ! | AATAGAAGAATTCATTGTGA+AGG | - | chr3.3:3345308-3345327 | None:intergenic | 25.0% |
| ! | AATTGGTTATAAAGAGACAA+CGG | - | chr3.3:3345033-3345052 | None:intergenic | 25.0% |
| ! | AATTTCAAGAGATTAGACAA+CGG | + | chr3.3:3343789-3343808 | MS.gene67746:CDS | 25.0% |
| ! | AGACTGTTAAAGAGATATTA+TGG | + | chr3.3:3344602-3344621 | MS.gene67746:intron | 25.0% |
| ! | AGAGATTAAAAGAAAACCTT+TGG | - | chr3.3:3347312-3347331 | None:intergenic | 25.0% |
| ! | ATGATAAAACCTTTCATCTA+AGG | + | chr3.3:3346941-3346960 | MS.gene67746:intron | 25.0% |
| ! | ATTATGTGATCTTTCATAAG+GGG | + | chr3.3:3345897-3345916 | MS.gene67746:intron | 25.0% |
| ! | CATTATGTGATCTTTCATAA+GGG | + | chr3.3:3345896-3345915 | MS.gene67746:intron | 25.0% |
| ! | CTTATTTCAGTAGAAAAACT+TGG | - | chr3.3:3346213-3346232 | None:intergenic | 25.0% |
| ! | GAAGTGAAAAACATGAAATT+AGG | + | chr3.3:3345155-3345174 | MS.gene67746:intron | 25.0% |
| ! | GATTAATAAGAATATTGGGT+TGG | + | chr3.3:3343722-3343741 | MS.gene67746:CDS | 25.0% |
| ! | TAAGAAGAAACTTCATTTGT+AGG | + | chr3.3:3346394-3346413 | MS.gene67746:intron | 25.0% |
| ! | TAATTTACAAAAAAACTCGC+AGG | - | chr3.3:3346433-3346452 | None:intergenic | 25.0% |
| ! | TATGCATTGTTGTCTAATAT+CGG | + | chr3.3:3346453-3346472 | MS.gene67746:intron | 25.0% |
| ! | TCATTATGTGATCTTTCATA+AGG | + | chr3.3:3345895-3345914 | MS.gene67746:intron | 25.0% |
| ! | TCGCCAAAAGAAAAAAAAAA+AGG | + | chr3.3:3345539-3345558 | MS.gene67746:intron | 25.0% |
| ! | TGAATAACAAGAAACAATCA+TGG | - | chr3.3:3346308-3346327 | None:intergenic | 25.0% |
| ! | TGACAAAAGTAGTTATAAGT+AGG | + | chr3.3:3345664-3345683 | MS.gene67746:intron | 25.0% |
| !! | AATGATAAGTTTTTATGGAG+AGG | - | chr3.3:3346788-3346807 | None:intergenic | 25.0% |
| !! | AATTTTGTTCCTTAGATGAA+AGG | - | chr3.3:3346953-3346972 | None:intergenic | 25.0% |
| !! | ATGAGATTCTTGATGATAAA+TGG | + | chr3.3:3344306-3344325 | MS.gene67746:CDS | 25.0% |
| !! | CATTTAAATCTGTTTCTTGT+TGG | + | chr3.3:3347273-3347292 | MS.gene67746:intron | 25.0% |
| !! | TGAGATTCTTGATGATAAAT+GGG | + | chr3.3:3344307-3344326 | MS.gene67746:CDS | 25.0% |
| !! | TTTAACTTATTAGGCTTGTT+TGG | + | chr3.3:3344549-3344568 | MS.gene67746:intron | 25.0% |
| !! | TTTTGCAGTTTAACATGTTT+AGG | + | chr3.3:3344809-3344828 | MS.gene67746:intron | 25.0% |
| !!! | ACAGTAGTTTTGTTTATACT+TGG | - | chr3.3:3347493-3347512 | None:intergenic | 25.0% |
| !!! | CAGTAGTTTTGTTTATACTT+GGG | - | chr3.3:3347492-3347511 | None:intergenic | 25.0% |
| !!! | CATATGTACATTTTTTGTGT+TGG | + | chr3.3:3346567-3346586 | MS.gene67746:intron | 25.0% |
| !!! | TACTTATAACTACTTTTGTC+AGG | - | chr3.3:3345665-3345684 | None:intergenic | 25.0% |
| !!! | TGGTCATGGTATTTTTTTTA+TGG | - | chr3.3:3346669-3346688 | None:intergenic | 25.0% |
| !!! | TTAAGCTATTTTTGCAAACA+AGG | + | chr3.3:3344779-3344798 | MS.gene67746:intron | 25.0% |
| !!! | TTTTAGGAGATTATACTATG+TGG | + | chr3.3:3343833-3343852 | MS.gene67746:CDS | 25.0% |
| AAATGTGTTCTCTTCGTATA+AGG | - | chr3.3:3343993-3344012 | None:intergenic | 30.0% | |
| AATTTGTGAGTAGGCAATTA+TGG | - | chr3.3:3346878-3346897 | None:intergenic | 30.0% | |
| ATCTAAGGAACAAAATTCTG+TGG | + | chr3.3:3346956-3346975 | MS.gene67746:intron | 30.0% | |
| ATTTCAAGAGATTAGACAAC+GGG | + | chr3.3:3343790-3343809 | MS.gene67746:CDS | 30.0% | |
| CAAATGAAGTTTCTTCTTAG+AGG | - | chr3.3:3346393-3346412 | None:intergenic | 30.0% | |
| CTCAAGGTTGTAACTTTAAT+GGG | + | chr3.3:3343649-3343668 | MS.gene67746:CDS | 30.0% | |
| CTTAAGCGCTTATATGATAT+AGG | + | chr3.3:3344736-3344755 | MS.gene67746:intron | 30.0% | |
| GAAATTGAAGCTGATTACAT+TGG | + | chr3.3:3347620-3347639 | MS.gene67746:CDS | 30.0% | |
| GACTCATTTCATTGATACAT+AGG | + | chr3.3:3345083-3345102 | MS.gene67746:intron | 30.0% | |
| GCAAGGAATTAATGCAAATA+TGG | - | chr3.3:3346905-3346924 | None:intergenic | 30.0% | |
| GCTACATGACTAAACATATA+GGG | - | chr3.3:3345271-3345290 | None:intergenic | 30.0% | |
| TAATTCCTTGCTTAGTAGTA+AGG | + | chr3.3:3346914-3346933 | MS.gene67746:intron | 30.0% | |
| TACAATTCGTATTTAGAGGT+TGG | - | chr3.3:3346689-3346708 | None:intergenic | 30.0% | |
| TCGAAATCGTAAATTGTTGT+GGG | + | chr3.3:3346141-3346160 | MS.gene67746:intron | 30.0% | |
| TCTATAATATCCTAGAGAGT+AGG | - | chr3.3:3347122-3347141 | None:intergenic | 30.0% | |
| TCTCAAGGTTGTAACTTTAA+TGG | + | chr3.3:3343648-3343667 | MS.gene67746:CDS | 30.0% | |
| TGAAATTGGTTGAATCACAA+TGG | + | chr3.3:3345801-3345820 | MS.gene67746:intron | 30.0% | |
| TGCTACATGACTAAACATAT+AGG | - | chr3.3:3345272-3345291 | None:intergenic | 30.0% | |
| TTTGTTAGACAGGTTAGAAT+AGG | + | chr3.3:3345111-3345130 | MS.gene67746:intron | 30.0% | |
| ! | ATAGGTAATGTTTGTTAGAC+AGG | + | chr3.3:3345101-3345120 | MS.gene67746:intron | 30.0% |
| ! | GCTTCAATTTAACTTCTTTG+TGG | + | chr3.3:3347351-3347370 | MS.gene67746:intron | 30.0% |
| ! | TATGGATGTAATTTGTGAGT+AGG | - | chr3.3:3346887-3346906 | None:intergenic | 30.0% |
| ! | TGTTGGTTAGATAGTCAAAA+TGG | - | chr3.3:3347403-3347422 | None:intergenic | 30.0% |
| ! | TTGTGTTTGATTTCGTCTTA+TGG | - | chr3.3:3345335-3345354 | None:intergenic | 30.0% |
| ! | TTTCTCTTAAAGTGTGGTTT+TGG | - | chr3.3:3345737-3345756 | None:intergenic | 30.0% |
| !! | AAAATTGGCTCTAATACCAT+TGG | - | chr3.3:3347175-3347194 | None:intergenic | 30.0% |
| !! | AACTGTGTATTTTGGGAATA+TGG | + | chr3.3:3343959-3343978 | MS.gene67746:CDS | 30.0% |
| !! | ACATTTGGATGGATTGAATT+GGG | + | chr3.3:3344382-3344401 | MS.gene67746:CDS | 30.0% |
| !! | GTAAAGGTGTTAGCTTTAAT+AGG | + | chr3.3:3343748-3343767 | MS.gene67746:CDS | 30.0% |
| !! | TCAGTGTAATGGATTAAAGA+TGG | - | chr3.3:3346513-3346532 | None:intergenic | 30.0% |
| !!! | TCATGTAGCAATGTTGTTTT+TGG | + | chr3.3:3345282-3345301 | MS.gene67746:intron | 30.0% |
| AAACACAAACGCAAACTAGA+CGG | + | chr3.3:3346003-3346022 | MS.gene67746:intron | 35.0% | |
| AAAGAGATGGAGAAGAAGAT+TGG | + | chr3.3:3344026-3344045 | MS.gene67746:CDS | 35.0% | |
| AACATTTCTCTTTCAGCACT+TGG | + | chr3.3:3346596-3346615 | MS.gene67746:intron | 35.0% | |
| AAGAAAACGAGCAGAATTAC+TGG | + | chr3.3:3347763-3347782 | MS.gene67746:CDS | 35.0% | |
| AAGAATGTAAGAGAAGGACA+TGG | + | chr3.3:3347824-3347843 | MS.gene67746:CDS | 35.0% | |
| AAGAGATGGAGAAGAAGATT+GGG | + | chr3.3:3344027-3344046 | MS.gene67746:CDS | 35.0% | |
| AATCCTAGGCATGTTATGAT+TGG | + | chr3.3:3343909-3343928 | MS.gene67746:CDS | 35.0% | |
| ACTTGAATTAGTGGAACTAG+AGG | + | chr3.3:3345197-3345216 | MS.gene67746:intron | 35.0% | |
| AGAAAGCCAAAATATTGCCA+TGG | - | chr3.3:3346479-3346498 | None:intergenic | 35.0% | |
| AGCAACTATTATTGGACATG+AGG | + | chr3.3:3344511-3344530 | MS.gene67746:CDS | 35.0% | |
| ATACCAATCATAACATGCCT+AGG | - | chr3.3:3343915-3343934 | None:intergenic | 35.0% | |
| ATCTAAAAGCTTAGAATCGC+CGG | - | chr3.3:3347720-3347739 | None:intergenic | 35.0% | |
| ATCTTCTTCTCCATCTCTTT+CGG | - | chr3.3:3344026-3344045 | None:intergenic | 35.0% | |
| CATGTGTCTCAGCTTAAAAA+GGG | - | chr3.3:3346355-3346374 | None:intergenic | 35.0% | |
| CTATGTCATCACTTCTCTTA+CGG | + | chr3.3:3344978-3344997 | MS.gene67746:CDS | 35.0% | |
| GAAGACTGATCGATAAAACA+GGG | + | chr3.3:3345869-3345888 | MS.gene67746:intron | 35.0% | |
| GAGAAGTTGGGAAAAATATC+CGG | + | chr3.3:3347698-3347717 | MS.gene67746:CDS | 35.0% | |
| GCAGAGATAGCAACTATTAT+TGG | + | chr3.3:3344503-3344522 | MS.gene67746:CDS | 35.0% | |
| GCATGTTATGATTGGTATAG+TGG | + | chr3.3:3343917-3343936 | MS.gene67746:CDS | 35.0% | |
| GCTTCAGAAAATACTGTGTT+TGG | + | chr3.3:3344206-3344225 | MS.gene67746:CDS | 35.0% | |
| GCTTTCAAAGTTGAAGTGTA+CGG | + | chr3.3:3345777-3345796 | MS.gene67746:intron | 35.0% | |
| GGATTAAAGATGGAAAACCA+TGG | - | chr3.3:3346503-3346522 | None:intergenic | 35.0% | |
| GTAAAGCAGTGTAACTCAAA+GGG | - | chr3.3:3346820-3346839 | None:intergenic | 35.0% | |
| GTCGAAATCGTAAATTGTTG+TGG | + | chr3.3:3346140-3346159 | MS.gene67746:intron | 35.0% | |
| GTTATGATTGGTATAGTGGT+TGG | + | chr3.3:3343921-3343940 | MS.gene67746:CDS | 35.0% | |
| GTTCAGAAGAGTAGGAAAAA+GGG | + | chr3.3:3344329-3344348 | MS.gene67746:CDS | 35.0% | |
| TACACAAATGTGGTGAATGA+TGG | + | chr3.3:3347522-3347541 | MS.gene67746:intron | 35.0% | |
| TACTGCAGAATTTATGCATC+AGG | - | chr3.3:3346842-3346861 | None:intergenic | 35.0% | |
| TGAAGACTGATCGATAAAAC+AGG | + | chr3.3:3345868-3345887 | MS.gene67746:intron | 35.0% | |
| TGATACCTTACTACTAAGCA+AGG | - | chr3.3:3346922-3346941 | None:intergenic | 35.0% | |
| TGCTTAAAAGTAGCTATGTC+AGG | - | chr3.3:3347429-3347448 | None:intergenic | 35.0% | |
| TGGGAAGATAGTTGTGTTTA+CGG | + | chr3.3:3344454-3344473 | MS.gene67746:CDS | 35.0% | |
| TTAACTCAGCCGTACAAAAT+CGG | - | chr3.3:3345713-3345732 | None:intergenic | 35.0% | |
| TTGAAGTGTACGGTTGAAAT+TGG | + | chr3.3:3345787-3345806 | MS.gene67746:intron | 35.0% | |
| TTTCAAGAGATTAGACAACG+GGG | + | chr3.3:3343791-3343810 | MS.gene67746:CDS | 35.0% | |
| ! | AATGATTACCTTCTGGAGAA+AGG | - | chr3.3:3345007-3345026 | None:intergenic | 35.0% |
| ! | ACTGTGTTTGGTGAAGAAAA+GGG | + | chr3.3:3344218-3344237 | MS.gene67746:CDS | 35.0% |
| ! | AGAATTGGTTTCAGAATCCT+AGG | + | chr3.3:3343895-3343914 | MS.gene67746:CDS | 35.0% |
| ! | AGTGCTGAAAGAGAAATGTT+CGG | - | chr3.3:3346596-3346615 | None:intergenic | 35.0% |
| ! | ATAAATGGGTTCAGAAGAGT+AGG | + | chr3.3:3344321-3344340 | MS.gene67746:CDS | 35.0% |
| ! | ATTGAATTGGGAGATTTTGG+TGG | + | chr3.3:3344394-3344413 | MS.gene67746:CDS | 35.0% |
| ! | TACTGTGTTTGGTGAAGAAA+AGG | + | chr3.3:3344217-3344236 | MS.gene67746:CDS | 35.0% |
| ! | TGGATTGAATTGGGAGATTT+TGG | + | chr3.3:3344391-3344410 | MS.gene67746:CDS | 35.0% |
| ! | TGGGATCGTAACATAGATTT+TGG | + | chr3.3:3346160-3346179 | MS.gene67746:intron | 35.0% |
| ! | TTAAAATGCCGCACATTTTG+AGG | - | chr3.3:3343861-3343880 | None:intergenic | 35.0% |
| !! | AAGATGAAGGCAGGTTTTAA+GGG | + | chr3.3:3344065-3344084 | MS.gene67746:CDS | 35.0% |
| !! | AAGCAAAAGGCATTAACCAT+AGG | - | chr3.3:3344428-3344447 | None:intergenic | 35.0% |
| !! | AATATTAGGGTTGGTTCTCA+AGG | + | chr3.3:3343633-3343652 | MS.gene67746:CDS | 35.0% |
| !! | AATATTGGGTTGGGTTGTAA+AGG | + | chr3.3:3343732-3343751 | MS.gene67746:CDS | 35.0% |
| !! | ATTAGTGCATTGACTGAAAG+TGG | + | chr3.3:3344251-3344270 | MS.gene67746:CDS | 35.0% |
| !! | ATTGTTGAAGCTTTGAAGAG+AGG | + | chr3.3:3344146-3344165 | MS.gene67746:CDS | 35.0% |
| !! | CACATTTGGATGGATTGAAT+TGG | + | chr3.3:3344381-3344400 | MS.gene67746:CDS | 35.0% |
| !! | CTTTTTAAGCTGAGACACAT+GGG | + | chr3.3:3346354-3346373 | MS.gene67746:intron | 35.0% |
| !! | GACATAGTGTTGACAATATC+AGG | - | chr3.3:3344965-3344984 | None:intergenic | 35.0% |
| !! | GGATTCTGAAACCAATTCTT+TGG | - | chr3.3:3343894-3343913 | None:intergenic | 35.0% |
| !! | TTGTTGAAGCTTTGAAGAGA+GGG | + | chr3.3:3344147-3344166 | MS.gene67746:CDS | 35.0% |
| !!! | AATATTTTGGCTTTCTGCCA+TGG | + | chr3.3:3346483-3346502 | MS.gene67746:intron | 35.0% |
| !!! | GATTTTGATTCCGAAAGAGA+TGG | + | chr3.3:3344013-3344032 | MS.gene67746:CDS | 35.0% |
| AAAGTGGAGGGAAAGTTGAA+GGG | + | chr3.3:3344267-3344286 | MS.gene67746:CDS | 40.0% | |
| AAGAAACAATCATGGCTAGC+AGG | - | chr3.3:3346300-3346319 | None:intergenic | 40.0% | |
| AAGTTGAAGGGAATTGGCAT+CGG | + | chr3.3:3344279-3344298 | MS.gene67746:CDS | 40.0% | |
| ACAAAAAAACTCGCAGGCAT+GGG | - | chr3.3:3346427-3346446 | None:intergenic | 40.0% | |
| ACCTAAAGTCTACGAGAAGT+TGG | + | chr3.3:3347685-3347704 | MS.gene67746:CDS | 40.0% | |
| AGAAACAATCATGGCTAGCA+GGG | - | chr3.3:3346299-3346318 | None:intergenic | 40.0% | |
| AGAGATGGAGAAGAAGATTG+GGG | + | chr3.3:3344028-3344047 | MS.gene67746:CDS | 40.0% | |
| AGGGGATGACAAAGAATATG+TGG | + | chr3.3:3344900-3344919 | MS.gene67746:CDS | 40.0% | |
| AGTCATACCAAGTCCATACA+AGG | - | chr3.3:3345493-3345512 | None:intergenic | 40.0% | |
| AGTTATGATGCCTACTCTCT+AGG | + | chr3.3:3347109-3347128 | MS.gene67746:intron | 40.0% | |
| ATCAGCTTCAATTTCCATCC+TGG | - | chr3.3:3347615-3347634 | None:intergenic | 40.0% | |
| ATCCTCACTCTTACACTTTC+AGG | - | chr3.3:3344113-3344132 | None:intergenic | 40.0% | |
| ATGTGGATCCTCAAAATGTG+CGG | + | chr3.3:3343850-3343869 | MS.gene67746:CDS | 40.0% | |
| CCATCCAAATGTGACGTATT+AGG | - | chr3.3:3344374-3344393 | None:intergenic | 40.0% | |
| CCATGTGTCTCAGCTTAAAA+AGG | - | chr3.3:3346356-3346375 | None:intergenic | 40.0% | |
| CCTAAAGTCTACGAGAAGTT+GGG | + | chr3.3:3347686-3347705 | MS.gene67746:CDS | 40.0% | |
| CCTAATACGTCACATTTGGA+TGG | + | chr3.3:3344371-3344390 | MS.gene67746:CDS | 40.0% | |
| CGTGAGGCCGAAATAATAAA+AGG | - | chr3.3:3345576-3345595 | None:intergenic | 40.0% | |
| GACCACAATGTGTCTGATTT+CGG | + | chr3.3:3347212-3347231 | MS.gene67746:intron | 40.0% | |
| GAGAGAGTTTGAGAAGATGA+AGG | + | chr3.3:3344052-3344071 | MS.gene67746:CDS | 40.0% | |
| GCAACCTAATACGTCACATT+TGG | + | chr3.3:3344367-3344386 | MS.gene67746:CDS | 40.0% | |
| GGGAAGATAGTTGTGTTTAC+GGG | + | chr3.3:3344455-3344474 | MS.gene67746:CDS | 40.0% | |
| GGGGATGACAAAGAATATGT+GGG | + | chr3.3:3344901-3344920 | MS.gene67746:CDS | 40.0% | |
| GGTAAAGCAGTGTAACTCAA+AGG | - | chr3.3:3346821-3346840 | None:intergenic | 40.0% | |
| GGTTCAGAAGAGTAGGAAAA+AGG | + | chr3.3:3344328-3344347 | MS.gene67746:CDS | 40.0% | |
| GTATGTTAGCGTAGTTCCAA+TGG | + | chr3.3:3347156-3347175 | MS.gene67746:intron | 40.0% | |
| TAACTCAGCCGTACAAAATC+GGG | - | chr3.3:3345712-3345731 | None:intergenic | 40.0% | |
| TACAAAAAAACTCGCAGGCA+TGG | - | chr3.3:3346428-3346447 | None:intergenic | 40.0% | |
| TCCAACCTAATTACCAAGCA+GGG | - | chr3.3:3344855-3344874 | None:intergenic | 40.0% | |
| TCCTCACTCTTACACTTTCA+GGG | - | chr3.3:3344112-3344131 | None:intergenic | 40.0% | |
| TGCTTGTAGAGTCAGTGTAA+TGG | - | chr3.3:3346524-3346543 | None:intergenic | 40.0% | |
| TGGTTATAAAGAGACAACGG+AGG | - | chr3.3:3345030-3345049 | None:intergenic | 40.0% | |
| TTCAAGAGATTAGACAACGG+GGG | + | chr3.3:3343792-3343811 | MS.gene67746:CDS | 40.0% | |
| TTGTTGTCTAATATCGGCCA+TGG | + | chr3.3:3346459-3346478 | MS.gene67746:intron | 40.0% | |
| TTTGAAGAGAGGGTTGAGTA+AGG | + | chr3.3:3344157-3344176 | MS.gene67746:CDS | 40.0% | |
| ! | ATCTGTTTCTTGTTGGACTG+TGG | + | chr3.3:3347280-3347299 | MS.gene67746:intron | 40.0% |
| ! | ATTGGTATAGTGGTTGGTTC+TGG | + | chr3.3:3343927-3343946 | MS.gene67746:CDS | 40.0% |
| ! | CTGTGTTTGGTGAAGAAAAG+GGG | + | chr3.3:3344219-3344238 | MS.gene67746:CDS | 40.0% |
| ! | GAAGATGAAGGCAGGTTTTA+AGG | + | chr3.3:3344064-3344083 | MS.gene67746:CDS | 40.0% |
| ! | GGTTGTTGAAGATGCTACTT+TGG | - | chr3.3:3346192-3346211 | None:intergenic | 40.0% |
| ! | GTTAATGCCTTTTGCTTACC+TGG | + | chr3.3:3344431-3344450 | MS.gene67746:CDS | 40.0% |
| ! | GTTTGATTTCGTCTTATGGC+AGG | - | chr3.3:3345331-3345350 | None:intergenic | 40.0% |
| ! | TATCGGCCATGGCAATATTT+TGG | + | chr3.3:3346470-3346489 | MS.gene67746:intron | 40.0% |
| ! | TATTTTGCCACTCATCCATC+TGG | + | chr3.3:3347740-3347759 | MS.gene67746:CDS | 40.0% |
| ! | TCGTATTTAGAGGTTGGTCA+TGG | - | chr3.3:3346683-3346702 | None:intergenic | 40.0% |
| ! | TTTTCTTCCAGATGGATGAG+TGG | - | chr3.3:3347750-3347769 | None:intergenic | 40.0% |
| !! | ACTTGTTTTCTGCACATCCT+CGG | + | chr3.3:3345464-3345483 | MS.gene67746:intron | 40.0% |
| !! | CCTTTTTAAGCTGAGACACA+TGG | + | chr3.3:3346353-3346372 | MS.gene67746:intron | 40.0% |
| !! | TAATTAGGTTGGACATGCTG+TGG | + | chr3.3:3344862-3344881 | MS.gene67746:intron | 40.0% |
| !! | TTTGGTGGTGAATGATCCTA+TGG | + | chr3.3:3344409-3344428 | MS.gene67746:CDS | 40.0% |
| !!! | AGATGAAGGCAGGTTTTAAG+GGG | + | chr3.3:3344066-3344085 | MS.gene67746:CDS | 40.0% |
| AACACAACTATCTTCCCACC+AGG | - | chr3.3:3344452-3344471 | None:intergenic | 45.0% | |
| AACCAATTCTTTGGCCCTCT+TGG | - | chr3.3:3343885-3343904 | None:intergenic | 45.0% | |
| ACGGAGGAATGATTACCTTC+TGG | - | chr3.3:3345014-3345033 | None:intergenic | 45.0% | |
| AGCAGGGAGATCATAAAGGT+CGG | - | chr3.3:3346254-3346273 | None:intergenic | 45.0% | |
| AGGGACGTCATAAAGATCGA+TGG | - | chr3.3:3346280-3346299 | None:intergenic | 45.0% | |
| AGTTGAAGGGAATTGGCATC+GGG | + | chr3.3:3344280-3344299 | MS.gene67746:CDS | 45.0% | |
| CCCAACTTCTCGTAGACTTT+AGG | - | chr3.3:3347689-3347708 | None:intergenic | 45.0% | |
| CTCCGAAATCAGACACATTG+TGG | - | chr3.3:3347217-3347236 | None:intergenic | 45.0% | |
| CTTCTATTAGTTGCATCCGC+CGG | + | chr3.3:3347644-3347663 | MS.gene67746:CDS | 45.0% | |
| GAAAGTGGAGGGAAAGTTGA+AGG | + | chr3.3:3344266-3344285 | MS.gene67746:CDS | 45.0% | |
| GAAGAGTAGGAAAAAGGGTC+AGG | + | chr3.3:3344334-3344353 | MS.gene67746:CDS | 45.0% | |
| GAGGGAAAGTTGAAGGGAAT+TGG | + | chr3.3:3344273-3344292 | MS.gene67746:CDS | 45.0% | |
| GAGTTTGAGAAGATGAAGGC+AGG | + | chr3.3:3344056-3344075 | MS.gene67746:CDS | 45.0% | |
| GGGACGTCATAAAGATCGAT+GGG | - | chr3.3:3346279-3346298 | None:intergenic | 45.0% | |
| GGTTGAGTAAGGAGAATGTG+TGG | + | chr3.3:3344168-3344187 | MS.gene67746:CDS | 45.0% | |
| GTAGCTATGTCAGGACATGT+TGG | - | chr3.3:3347420-3347439 | None:intergenic | 45.0% | |
| GTCCAACCTAATTACCAAGC+AGG | - | chr3.3:3344856-3344875 | None:intergenic | 45.0% | |
| ! | AATGCCTTTTGCTTACCTGG+TGG | + | chr3.3:3344434-3344453 | MS.gene67746:CDS | 45.0% |
| ! | ACCCTGAAAGTGTAAGAGTG+AGG | + | chr3.3:3344108-3344127 | MS.gene67746:CDS | 45.0% |
| ! | AGAGAAGGACATGGTGTTGA+AGG | + | chr3.3:3347833-3347852 | MS.gene67746:CDS | 45.0% |
| ! | ATGCCTTTTGCTTACCTGGT+GGG | + | chr3.3:3344435-3344454 | MS.gene67746:CDS | 45.0% |
| ! | CACTTCCCTGCTTGGTAATT+AGG | + | chr3.3:3344847-3344866 | MS.gene67746:intron | 45.0% |
| ! | CCGTACAAAATCGGGTTGTA+CGG | - | chr3.3:3345704-3345723 | None:intergenic | 45.0% |
| ! | CCGTACAACCCGATTTTGTA+CGG | + | chr3.3:3345701-3345720 | MS.gene67746:intron | 45.0% |
| ! | CGTGCTTGGTTATGCCATTT+GGG | - | chr3.3:3346757-3346776 | None:intergenic | 45.0% |
| ! | CTCTCGAGTCAACTCGTTTT+GGG | - | chr3.3:3345441-3345460 | None:intergenic | 45.0% |
| ! | GAAGCATTCGTTAGCCCAAA+TGG | + | chr3.3:3346740-3346759 | MS.gene67746:intron | 45.0% |
| ! | GTTTGGTGAAGAAAAGGGGA+AGG | + | chr3.3:3344223-3344242 | MS.gene67746:CDS | 45.0% |
| ! | TCCCTGCTTGGTAATTAGGT+TGG | + | chr3.3:3344851-3344870 | MS.gene67746:intron | 45.0% |
| ! | TCTGCTCGTTTTCTTCCAGA+TGG | - | chr3.3:3347758-3347777 | None:intergenic | 45.0% |
| ! | TGCGGCATTTTAAGCCAAGA+GGG | + | chr3.3:3343868-3343887 | MS.gene67746:CDS | 45.0% |
| !! | AGAATTACTGGCTCAAGCTC+AGG | + | chr3.3:3347775-3347794 | MS.gene67746:CDS | 45.0% |
| !! | AGTGCATTGACTGAAAGTGG+AGG | + | chr3.3:3344254-3344273 | MS.gene67746:CDS | 45.0% |
| !! | ATAAAGATCGATGGGCTAGC+AGG | - | chr3.3:3346271-3346290 | None:intergenic | 45.0% |
| !! | GTGCATTGACTGAAAGTGGA+GGG | + | chr3.3:3344255-3344274 | MS.gene67746:CDS | 45.0% |
| !! | TAAAGATCGATGGGCTAGCA+GGG | - | chr3.3:3346270-3346289 | None:intergenic | 45.0% |
| !! | TGGACTGTGGATTAGTCCAA+AGG | + | chr3.3:3347293-3347312 | MS.gene67746:intron | 45.0% |
| ACACTTTCAGGGTGCATTGC+AGG | - | chr3.3:3344101-3344120 | None:intergenic | 50.0% | |
| ACATCCTCGGATGCCTTGTA+TGG | + | chr3.3:3345477-3345496 | MS.gene67746:intron | 50.0% | |
| AGCCAAGAGGGCCAAAGAAT+TGG | + | chr3.3:3343880-3343899 | MS.gene67746:CDS | 50.0% | |
| AGGCCATATTTCACCCAACG+TGG | - | chr3.3:3345645-3345664 | None:intergenic | 50.0% | |
| AGGGAGATCATAAAGGTCGG+TGG | - | chr3.3:3346251-3346270 | None:intergenic | 50.0% | |
| CAGTCTAACACTTCCCTGCT+TGG | + | chr3.3:3344839-3344858 | MS.gene67746:intron | 50.0% | |
| CGCTGTGACTTATACTGTCG+AGG | - | chr3.3:3346332-3346351 | None:intergenic | 50.0% | |
| CTATCCCTTGGCGTGAGAAT+GGG | + | chr3.3:3345606-3345625 | MS.gene67746:intron | 50.0% | |
| CTTCCCACCAGGTAAGCAAA+AGG | - | chr3.3:3344441-3344460 | None:intergenic | 50.0% | |
| GCCATATTTCACCCAACGTG+GGG | - | chr3.3:3345643-3345662 | None:intergenic | 50.0% | |
| GCGTGCTTGGTTATGCCATT+TGG | - | chr3.3:3346758-3346777 | None:intergenic | 50.0% | |
| GGCCATATTTCACCCAACGT+GGG | - | chr3.3:3345644-3345663 | None:intergenic | 50.0% | |
| GGCTAGCAGGGAGATCATAA+AGG | - | chr3.3:3346258-3346277 | None:intergenic | 50.0% | |
| GTGGTAATAGTCCCCACGTT+GGG | + | chr3.3:3345629-3345648 | MS.gene67746:intron | 50.0% | |
| TACGGCTTCCTTTCTCCAGA+AGG | + | chr3.3:3344996-3345015 | MS.gene67746:CDS | 50.0% | |
| TATCCCTTGGCGTGAGAATG+GGG | + | chr3.3:3345607-3345626 | MS.gene67746:intron | 50.0% | |
| TCCCCACGTTGGGTGAAATA+TGG | + | chr3.3:3345639-3345658 | MS.gene67746:intron | 50.0% | |
| TCGGATGCCTTGTATGGACT+TGG | + | chr3.3:3345483-3345502 | MS.gene67746:intron | 50.0% | |
| TCTATCCCTTGGCGTGAGAA+TGG | + | chr3.3:3345605-3345624 | MS.gene67746:intron | 50.0% | |
| ! | AAGTCCATACAAGGCATCCG+AGG | - | chr3.3:3345484-3345503 | None:intergenic | 50.0% |
| ! | CGCTCTAGATGTCTATCCCT+TGG | + | chr3.3:3345594-3345613 | MS.gene67746:intron | 50.0% |
| ! | GCTCTCGAGTCAACTCGTTT+TGG | - | chr3.3:3345442-3345461 | None:intergenic | 50.0% |
| ! | GGAGGTCAGAGGTGTAAACA+CGG | - | chr3.3:3345420-3345439 | None:intergenic | 50.0% |
| ! | GGATAGACATCTAGAGCGTG+AGG | - | chr3.3:3345592-3345611 | None:intergenic | 50.0% |
| ! | GTGCGGCATTTTAAGCCAAG+AGG | + | chr3.3:3343867-3343886 | MS.gene67746:CDS | 50.0% |
| ! | TAGACTTTAGGTGCCACACG+TGG | - | chr3.3:3347677-3347696 | None:intergenic | 50.0% |
| !! | CAGTCTCAGAAGTGCTTAGC+AGG | - | chr3.3:3344588-3344607 | None:intergenic | 50.0% |
| !! | TCGAGTCAACTCGTTTTGGG+AGG | - | chr3.3:3345438-3345457 | None:intergenic | 50.0% |
| !!! | AACTCGTTTTGGGAGGTCAG+AGG | - | chr3.3:3345431-3345450 | None:intergenic | 50.0% |
| AGGAAAAAGGGTCAGGAGCG+AGG | + | chr3.3:3344341-3344360 | MS.gene67746:CDS | 55.0% | |
| GAGAGGACATTACGCGTGCT+TGG | - | chr3.3:3346771-3346790 | None:intergenic | 55.0% | |
| GGAAAAAGGGTCAGGAGCGA+GGG | + | chr3.3:3344342-3344361 | MS.gene67746:CDS | 55.0% | |
| GGTGGTAATAGTCCCCACGT+TGG | + | chr3.3:3345628-3345647 | MS.gene67746:intron | 55.0% | |
| TGCCACACGTGGATCATAGC+CGG | - | chr3.3:3347666-3347685 | None:intergenic | 55.0% | |
| ! | ACTGGCTCAAGCTCAGGTGA+TGG | + | chr3.3:3347781-3347800 | MS.gene67746:CDS | 55.0% |
| ACCACCCCATTCTCACGCCA+AGG | - | chr3.3:3345614-3345633 | None:intergenic | 60.0% | |
| CACACGTGGATCATAGCCGG+CGG | - | chr3.3:3347663-3347682 | None:intergenic | 60.0% | |
| CATCCCCTCAGCACTGTGTC+TGG | - | chr3.3:3344888-3344907 | None:intergenic | 60.0% | |
| CCACCCCATTCTCACGCCAA+GGG | - | chr3.3:3345613-3345632 | None:intergenic | 60.0% | |
| TGTGGCCAGACACAGTGCTG+AGG | + | chr3.3:3344880-3344899 | MS.gene67746:CDS | 60.0% | |
| ! | GTGGCCAGACACAGTGCTGA+GGG | + | chr3.3:3344881-3344900 | MS.gene67746:CDS | 60.0% |
| ! | TGGCCAGACACAGTGCTGAG+GGG | + | chr3.3:3344882-3344901 | MS.gene67746:CDS | 60.0% |
| CCCTTGGCGTGAGAATGGGG+TGG | + | chr3.3:3345610-3345629 | MS.gene67746:intron | 65.0% | |
| ! | CGCCGGCTATGATCCACGTG+TGG | + | chr3.3:3347661-3347680 | MS.gene67746:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 3343612 | 3347865 | 3343612 | ID=MS.gene67746 |
| chr3.3 | mRNA | 3343612 | 3347865 | 3343612 | ID=MS.gene67746.t1;Parent=MS.gene67746 |
| chr3.3 | exon | 3343612 | 3344532 | 3343612 | ID=MS.gene67746.t1.exon1;Parent=MS.gene67746.t1 |
| chr3.3 | CDS | 3343612 | 3344532 | 3343612 | ID=cds.MS.gene67746.t1;Parent=MS.gene67746.t1 |
| chr3.3 | exon | 3344869 | 3345017 | 3344869 | ID=MS.gene67746.t1.exon2;Parent=MS.gene67746.t1 |
| chr3.3 | CDS | 3344869 | 3345017 | 3344869 | ID=cds.MS.gene67746.t1;Parent=MS.gene67746.t1 |
| chr3.3 | exon | 3347616 | 3347865 | 3347616 | ID=MS.gene67746.t1.exon3;Parent=MS.gene67746.t1 |
| chr3.3 | CDS | 3347616 | 3347865 | 3347616 | ID=cds.MS.gene67746.t1;Parent=MS.gene67746.t1 |
| Gene Sequence |
| Protein sequence |
