Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51511.t1 | XP_013458801.1 | 98.9 | 364 | 4 | 0 | 76 | 439 | 167 | 530 | 6.80E-207 | 729.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51511.t1 | P36163 | 27.2 | 305 | 149 | 4 | 119 | 415 | 79 | 318 | 1.3e-28 | 129.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51511.t1 | A0A072UUV2 | 98.9 | 364 | 4 | 0 | 76 | 439 | 167 | 530 | 4.9e-207 | 729.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene51511 | 0.845103 | 5.00E-59 | -1.69E-46 |
| MS.gene049159 | MS.gene51511 | 0.843866 | 1.08E-58 | -1.69E-46 |
| MS.gene049254 | MS.gene51511 | 0.876046 | 1.91E-68 | -1.69E-46 |
| MS.gene049272 | MS.gene51511 | 0.815662 | 8.24E-52 | -1.69E-46 |
| MS.gene049343 | MS.gene51511 | 0.865203 | 7.00E-65 | -1.69E-46 |
| MS.gene049350 | MS.gene51511 | 0.818504 | 1.89E-52 | -1.69E-46 |
| MS.gene049404 | MS.gene51511 | 0.852199 | 5.40E-61 | -1.69E-46 |
| MS.gene049435 | MS.gene51511 | 0.804535 | 2.06E-49 | -1.69E-46 |
| MS.gene049501 | MS.gene51511 | 0.828655 | 7.97E-55 | -1.69E-46 |
| MS.gene049711 | MS.gene51511 | 0.828515 | 8.61E-55 | -1.69E-46 |
| MS.gene049821 | MS.gene51511 | 0.808813 | 2.58E-50 | -1.69E-46 |
| MS.gene049824 | MS.gene51511 | 0.806925 | 6.49E-50 | -1.69E-46 |
| MS.gene049825 | MS.gene51511 | 0.83338 | 5.51E-56 | -1.69E-46 |
| MS.gene049850 | MS.gene51511 | 0.879242 | 1.46E-69 | -1.69E-46 |
| MS.gene049873 | MS.gene51511 | 0.844959 | 5.47E-59 | -1.69E-46 |
| MS.gene049983 | MS.gene51511 | 0.800906 | 1.16E-48 | -1.69E-46 |
| MS.gene050020 | MS.gene51511 | 0.801641 | 8.18E-49 | -1.69E-46 |
| MS.gene050026 | MS.gene51511 | 0.828559 | 8.40E-55 | -1.69E-46 |
| MS.gene050156 | MS.gene51511 | 0.869668 | 2.61E-66 | -1.69E-46 |
| MS.gene05016 | MS.gene51511 | 0.812326 | 4.48E-51 | -1.69E-46 |
| MS.gene050237 | MS.gene51511 | 0.815718 | 8.01E-52 | -1.69E-46 |
| MS.gene050273 | MS.gene51511 | 0.804562 | 2.04E-49 | -1.69E-46 |
| MS.gene050355 | MS.gene51511 | 0.815054 | 1.13E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene51511 | 0.815786 | 7.74E-52 | -1.69E-46 |
| MS.gene05045 | MS.gene51511 | 0.827461 | 1.54E-54 | -1.69E-46 |
| MS.gene050559 | MS.gene51511 | 0.83395 | 3.97E-56 | -1.69E-46 |
| MS.gene050561 | MS.gene51511 | 0.834437 | 3.00E-56 | -1.69E-46 |
| MS.gene050562 | MS.gene51511 | 0.815116 | 1.09E-51 | -1.69E-46 |
| MS.gene050689 | MS.gene51511 | 0.803556 | 3.29E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene51511 | 0.825491 | 4.55E-54 | -1.69E-46 |
| MS.gene050721 | MS.gene51511 | 0.824977 | 6.02E-54 | -1.69E-46 |
| MS.gene050724 | MS.gene51511 | 0.814543 | 1.46E-51 | -1.69E-46 |
| MS.gene050750 | MS.gene51511 | 0.810582 | 1.07E-50 | -1.69E-46 |
| MS.gene050780 | MS.gene51511 | 0.801854 | 7.40E-49 | -1.69E-46 |
| MS.gene050799 | MS.gene51511 | 0.837287 | 5.68E-57 | -1.69E-46 |
| MS.gene050807 | MS.gene51511 | 0.810142 | 1.33E-50 | -1.69E-46 |
| MS.gene050844 | MS.gene51511 | 0.827228 | 1.76E-54 | -1.69E-46 |
| MS.gene050905 | MS.gene51511 | -0.803152 | 4.00E-49 | -1.69E-46 |
| MS.gene051181 | MS.gene51511 | 0.808551 | 2.93E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene51511 | 0.821996 | 3.00E-53 | -1.69E-46 |
| MS.gene051247 | MS.gene51511 | 0.859282 | 4.61E-63 | -1.69E-46 |
| MS.gene051265 | MS.gene51511 | 0.804888 | 1.74E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene51511 | 0.805818 | 1.11E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene51511 | 0.807126 | 5.89E-50 | -1.69E-46 |
| MS.gene051594 | MS.gene51511 | 0.835143 | 1.99E-56 | -1.69E-46 |
| MS.gene051700 | MS.gene51511 | 0.810735 | 9.94E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene51511 | 0.882543 | 9.54E-71 | -1.69E-46 |
| MS.gene051720 | MS.gene51511 | 0.861141 | 1.26E-63 | -1.69E-46 |
| MS.gene051744 | MS.gene51511 | 0.85808 | 1.05E-62 | -1.69E-46 |
| MS.gene051957 | MS.gene51511 | 0.864102 | 1.55E-64 | -1.69E-46 |
| MS.gene052012 | MS.gene51511 | 0.825064 | 5.75E-54 | -1.69E-46 |
| MS.gene052020 | MS.gene51511 | 0.829026 | 6.48E-55 | -1.69E-46 |
| MS.gene052042 | MS.gene51511 | 0.803279 | 3.76E-49 | -1.69E-46 |
| MS.gene052108 | MS.gene51511 | 0.802921 | 4.46E-49 | -1.69E-46 |
| MS.gene052190 | MS.gene51511 | 0.840714 | 7.36E-58 | -1.69E-46 |
| MS.gene052208 | MS.gene51511 | 0.828539 | 8.50E-55 | -1.69E-46 |
| MS.gene052323 | MS.gene51511 | 0.828562 | 8.39E-55 | -1.69E-46 |
| MS.gene052358 | MS.gene51511 | -0.813137 | 2.98E-51 | -1.69E-46 |
| MS.gene052384 | MS.gene51511 | 0.811377 | 7.22E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene51511 | 0.829421 | 5.20E-55 | -1.69E-46 |
| MS.gene052516 | MS.gene51511 | 0.868061 | 8.64E-66 | -1.69E-46 |
| MS.gene052519 | MS.gene51511 | 0.887396 | 1.48E-72 | -1.69E-46 |
| MS.gene052582 | MS.gene51511 | 0.827828 | 1.26E-54 | -1.69E-46 |
| MS.gene052584 | MS.gene51511 | 0.839239 | 1.78E-57 | -1.69E-46 |
| MS.gene052611 | MS.gene51511 | 0.868921 | 4.56E-66 | -1.69E-46 |
| MS.gene052613 | MS.gene51511 | 0.804802 | 1.81E-49 | -1.69E-46 |
| MS.gene052773 | MS.gene51511 | 0.86781 | 1.04E-65 | -1.69E-46 |
| MS.gene052829 | MS.gene51511 | 0.818908 | 1.53E-52 | -1.69E-46 |
| MS.gene052843 | MS.gene51511 | 0.815101 | 1.10E-51 | -1.69E-46 |
| MS.gene052863 | MS.gene51511 | 0.8768 | 1.05E-68 | -1.69E-46 |
| MS.gene052867 | MS.gene51511 | 0.81219 | 4.80E-51 | -1.69E-46 |
| MS.gene052896 | MS.gene51511 | 0.838394 | 2.95E-57 | -1.69E-46 |
| MS.gene053006 | MS.gene51511 | 0.803963 | 2.71E-49 | -1.69E-46 |
| MS.gene053008 | MS.gene51511 | 0.846295 | 2.38E-59 | -1.69E-46 |
| MS.gene053079 | MS.gene51511 | 0.807694 | 4.46E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene51511 | 0.817714 | 2.86E-52 | -1.69E-46 |
| MS.gene053145 | MS.gene51511 | 0.851014 | 1.17E-60 | -1.69E-46 |
| MS.gene053146 | MS.gene51511 | 0.811259 | 7.66E-51 | -1.69E-46 |
| MS.gene053166 | MS.gene51511 | 0.829925 | 3.92E-55 | -1.69E-46 |
| MS.gene053201 | MS.gene51511 | 0.809383 | 1.94E-50 | -1.69E-46 |
| MS.gene053202 | MS.gene51511 | 0.804846 | 1.78E-49 | -1.69E-46 |
| MS.gene053221 | MS.gene51511 | 0.81014 | 1.34E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene51511 | 0.892526 | 1.46E-74 | -1.69E-46 |
| MS.gene053597 | MS.gene51511 | 0.820178 | 7.87E-53 | -1.69E-46 |
| MS.gene053599 | MS.gene51511 | 0.837366 | 5.42E-57 | -1.69E-46 |
| MS.gene05364 | MS.gene51511 | 0.830946 | 2.20E-55 | -1.69E-46 |
| MS.gene053883 | MS.gene51511 | 0.817997 | 2.47E-52 | -1.69E-46 |
| MS.gene053900 | MS.gene51511 | 0.834719 | 2.55E-56 | -1.69E-46 |
| MS.gene053953 | MS.gene51511 | 0.804062 | 2.59E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene51511 | 0.822769 | 1.98E-53 | -1.69E-46 |
| MS.gene053967 | MS.gene51511 | 0.807862 | 4.11E-50 | -1.69E-46 |
| MS.gene053974 | MS.gene51511 | 0.802884 | 4.54E-49 | -1.69E-46 |
| MS.gene053995 | MS.gene51511 | 0.817735 | 2.83E-52 | -1.69E-46 |
| MS.gene053998 | MS.gene51511 | 0.818655 | 1.75E-52 | -1.69E-46 |
| MS.gene05415 | MS.gene51511 | 0.844438 | 7.56E-59 | -1.69E-46 |
| MS.gene054236 | MS.gene51511 | 0.826048 | 3.36E-54 | -1.69E-46 |
| MS.gene05423 | MS.gene51511 | 0.834121 | 3.60E-56 | -1.69E-46 |
| MS.gene054291 | MS.gene51511 | -0.810859 | 9.35E-51 | -1.69E-46 |
| MS.gene054467 | MS.gene51511 | 0.816359 | 5.76E-52 | -1.69E-46 |
| MS.gene054468 | MS.gene51511 | 0.810968 | 8.85E-51 | -1.69E-46 |
| MS.gene054472 | MS.gene51511 | 0.840515 | 8.30E-58 | -1.69E-46 |
| MS.gene05447 | MS.gene51511 | 0.803173 | 3.96E-49 | -1.69E-46 |
| MS.gene054559 | MS.gene51511 | 0.817362 | 3.43E-52 | -1.69E-46 |
| MS.gene054582 | MS.gene51511 | 0.817835 | 2.68E-52 | -1.69E-46 |
| MS.gene054584 | MS.gene51511 | 0.803624 | 3.19E-49 | -1.69E-46 |
| MS.gene05458 | MS.gene51511 | 0.832956 | 7.03E-56 | -1.69E-46 |
| MS.gene054651 | MS.gene51511 | 0.897515 | 1.30E-76 | -1.69E-46 |
| MS.gene054775 | MS.gene51511 | 0.859777 | 3.27E-63 | -1.69E-46 |
| MS.gene054991 | MS.gene51511 | 0.82337 | 1.44E-53 | -1.69E-46 |
| MS.gene055166 | MS.gene51511 | 0.803057 | 4.18E-49 | -1.69E-46 |
| MS.gene055227 | MS.gene51511 | 0.846515 | 2.07E-59 | -1.69E-46 |
| MS.gene055228 | MS.gene51511 | 0.816624 | 5.02E-52 | -1.69E-46 |
| MS.gene055356 | MS.gene51511 | 0.803967 | 2.71E-49 | -1.69E-46 |
| MS.gene055374 | MS.gene51511 | 0.802069 | 6.68E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene51511 | 0.828621 | 8.12E-55 | -1.69E-46 |
| MS.gene055466 | MS.gene51511 | 0.855275 | 7.04E-62 | -1.69E-46 |
| MS.gene055468 | MS.gene51511 | 0.830792 | 2.40E-55 | -1.69E-46 |
| MS.gene055512 | MS.gene51511 | 0.832503 | 9.11E-56 | -1.69E-46 |
| MS.gene055513 | MS.gene51511 | 0.802804 | 4.71E-49 | -1.69E-46 |
| MS.gene055580 | MS.gene51511 | -0.801167 | 1.02E-48 | -1.69E-46 |
| MS.gene055586 | MS.gene51511 | 0.808298 | 3.32E-50 | -1.69E-46 |
| MS.gene055589 | MS.gene51511 | 0.825589 | 4.32E-54 | -1.69E-46 |
| MS.gene055694 | MS.gene51511 | 0.804387 | 2.21E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene51511 | 0.847397 | 1.19E-59 | -1.69E-46 |
| MS.gene055818 | MS.gene51511 | 0.891652 | 3.27E-74 | -1.69E-46 |
| MS.gene055926 | MS.gene51511 | 0.819684 | 1.02E-52 | -1.69E-46 |
| MS.gene05604 | MS.gene51511 | 0.844689 | 6.47E-59 | -1.69E-46 |
| MS.gene056050 | MS.gene51511 | 0.856832 | 2.46E-62 | -1.69E-46 |
| MS.gene056173 | MS.gene51511 | 0.845564 | 3.75E-59 | -1.69E-46 |
| MS.gene056174 | MS.gene51511 | 0.824358 | 8.43E-54 | -1.69E-46 |
| MS.gene056308 | MS.gene51511 | 0.831957 | 1.24E-55 | -1.69E-46 |
| MS.gene056366 | MS.gene51511 | 0.881238 | 2.83E-70 | -1.69E-46 |
| MS.gene056373 | MS.gene51511 | 0.830192 | 3.37E-55 | -1.69E-46 |
| MS.gene056498 | MS.gene51511 | 0.815811 | 7.64E-52 | -1.69E-46 |
| MS.gene056545 | MS.gene51511 | 0.806149 | 9.47E-50 | -1.69E-46 |
| MS.gene056553 | MS.gene51511 | 0.817438 | 3.30E-52 | -1.69E-46 |
| MS.gene056595 | MS.gene51511 | 0.872543 | 2.93E-67 | -1.69E-46 |
| MS.gene056699 | MS.gene51511 | 0.80127 | 9.74E-49 | -1.69E-46 |
| MS.gene056776 | MS.gene51511 | 0.815143 | 1.08E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene51511 | 0.829442 | 5.14E-55 | -1.69E-46 |
| MS.gene05690 | MS.gene51511 | 0.840055 | 1.09E-57 | -1.69E-46 |
| MS.gene057026 | MS.gene51511 | 0.851367 | 9.30E-61 | -1.69E-46 |
| MS.gene057027 | MS.gene51511 | 0.811016 | 8.64E-51 | -1.69E-46 |
| MS.gene057060 | MS.gene51511 | 0.827187 | 1.80E-54 | -1.69E-46 |
| MS.gene057102 | MS.gene51511 | 0.810673 | 1.03E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene51511 | 0.830107 | 3.54E-55 | -1.69E-46 |
| MS.gene057314 | MS.gene51511 | 0.805916 | 1.06E-49 | -1.69E-46 |
| MS.gene057414 | MS.gene51511 | 0.835299 | 1.82E-56 | -1.69E-46 |
| MS.gene057444 | MS.gene51511 | 0.860215 | 2.41E-63 | -1.69E-46 |
| MS.gene057598 | MS.gene51511 | 0.812354 | 4.42E-51 | -1.69E-46 |
| MS.gene057693 | MS.gene51511 | 0.824371 | 8.37E-54 | -1.69E-46 |
| MS.gene057855 | MS.gene51511 | 0.829132 | 6.11E-55 | -1.69E-46 |
| MS.gene057915 | MS.gene51511 | 0.846583 | 1.98E-59 | -1.69E-46 |
| MS.gene057921 | MS.gene51511 | 0.800593 | 1.34E-48 | -1.69E-46 |
| MS.gene058008 | MS.gene51511 | 0.820618 | 6.24E-53 | -1.69E-46 |
| MS.gene058009 | MS.gene51511 | 0.847415 | 1.17E-59 | -1.69E-46 |
| MS.gene058010 | MS.gene51511 | 0.820642 | 6.16E-53 | -1.69E-46 |
| MS.gene058037 | MS.gene51511 | 0.840914 | 6.53E-58 | -1.69E-46 |
| MS.gene058088 | MS.gene51511 | 0.80011 | 1.68E-48 | -1.69E-46 |
| MS.gene05847 | MS.gene51511 | 0.81345 | 2.54E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene51511 | 0.91347 | 5.93E-84 | -1.69E-46 |
| MS.gene058636 | MS.gene51511 | 0.838307 | 3.11E-57 | -1.69E-46 |
| MS.gene058783 | MS.gene51511 | 0.831952 | 1.25E-55 | -1.69E-46 |
| MS.gene058829 | MS.gene51511 | 0.850329 | 1.82E-60 | -1.69E-46 |
| MS.gene058979 | MS.gene51511 | 0.868318 | 7.14E-66 | -1.69E-46 |
| MS.gene059015 | MS.gene51511 | 0.84153 | 4.49E-58 | -1.69E-46 |
| MS.gene059084 | MS.gene51511 | 0.804247 | 2.37E-49 | -1.69E-46 |
| MS.gene059272 | MS.gene51511 | 0.846816 | 1.71E-59 | -1.69E-46 |
| MS.gene05954 | MS.gene51511 | 0.837575 | 4.79E-57 | -1.69E-46 |
| MS.gene059570 | MS.gene51511 | 0.819762 | 9.80E-53 | -1.69E-46 |
| MS.gene059625 | MS.gene51511 | 0.851911 | 6.52E-61 | -1.69E-46 |
| MS.gene059725 | MS.gene51511 | 0.805015 | 1.64E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene51511 | 0.841281 | 5.23E-58 | -1.69E-46 |
| MS.gene059937 | MS.gene51511 | 0.802773 | 4.78E-49 | -1.69E-46 |
| MS.gene059965 | MS.gene51511 | 0.809744 | 1.63E-50 | -1.69E-46 |
| MS.gene060312 | MS.gene51511 | 0.804501 | 2.10E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene51511 | 0.844702 | 6.42E-59 | -1.69E-46 |
| MS.gene060352 | MS.gene51511 | 0.838441 | 2.87E-57 | -1.69E-46 |
| MS.gene060365 | MS.gene51511 | 0.803629 | 3.18E-49 | -1.69E-46 |
| MS.gene060429 | MS.gene51511 | 0.82571 | 4.04E-54 | -1.69E-46 |
| MS.gene060519 | MS.gene51511 | 0.811242 | 7.72E-51 | -1.69E-46 |
| MS.gene060521 | MS.gene51511 | 0.828853 | 7.14E-55 | -1.69E-46 |
| MS.gene06052 | MS.gene51511 | 0.800682 | 1.29E-48 | -1.69E-46 |
| MS.gene060572 | MS.gene51511 | 0.848785 | 4.91E-60 | -1.69E-46 |
| MS.gene060587 | MS.gene51511 | 0.826302 | 2.92E-54 | -1.69E-46 |
| MS.gene060689 | MS.gene51511 | 0.816534 | 5.26E-52 | -1.69E-46 |
| MS.gene060690 | MS.gene51511 | 0.812033 | 5.20E-51 | -1.69E-46 |
| MS.gene060781 | MS.gene51511 | 0.80235 | 5.85E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene51511 | 0.839763 | 1.30E-57 | -1.69E-46 |
| MS.gene060935 | MS.gene51511 | 0.828769 | 7.48E-55 | -1.69E-46 |
| MS.gene060937 | MS.gene51511 | 0.808374 | 3.20E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51511.t1 | MTR_3g006860 | 97.494 | 439 | 11 | 0 | 1 | 439 | 92 | 530 | 0.0 | 886 |
| MS.gene51511.t1 | MTR_6g463380 | 90.433 | 439 | 42 | 0 | 1 | 439 | 96 | 534 | 0.0 | 827 |
| MS.gene51511.t1 | MTR_6g463380 | 88.858 | 359 | 40 | 0 | 1 | 359 | 96 | 454 | 0.0 | 668 |
| MS.gene51511.t1 | MTR_6g463380 | 89.076 | 357 | 39 | 0 | 1 | 357 | 96 | 452 | 0.0 | 665 |
| MS.gene51511.t1 | MTR_6g079410 | 48.517 | 472 | 145 | 13 | 22 | 431 | 29 | 464 | 1.61e-129 | 382 |
| MS.gene51511.t1 | MTR_6g061650 | 54.103 | 329 | 102 | 8 | 109 | 433 | 32 | 315 | 7.20e-106 | 317 |
| MS.gene51511.t1 | MTR_6g006850 | 36.957 | 322 | 153 | 8 | 122 | 436 | 29 | 307 | 1.22e-55 | 187 |
| MS.gene51511.t1 | MTR_1g014390 | 46.701 | 197 | 75 | 3 | 237 | 430 | 119 | 288 | 6.49e-49 | 169 |
| MS.gene51511.t1 | MTR_6g006710 | 34.967 | 306 | 118 | 7 | 137 | 436 | 63 | 293 | 3.66e-45 | 159 |
| MS.gene51511.t1 | MTR_1g029560 | 41.667 | 204 | 94 | 5 | 239 | 436 | 18 | 202 | 1.69e-41 | 146 |
| MS.gene51511.t1 | MTR_1g012010 | 43.939 | 132 | 69 | 2 | 230 | 359 | 112 | 240 | 1.05e-25 | 105 |
| MS.gene51511.t1 | MTR_7g025575 | 60.227 | 88 | 28 | 2 | 358 | 439 | 13 | 99 | 5.41e-25 | 99.4 |
| MS.gene51511.t1 | MTR_1g012015 | 60.000 | 75 | 27 | 1 | 359 | 430 | 23 | 97 | 1.73e-24 | 97.4 |
| MS.gene51511.t1 | MTR_6g080120 | 68.000 | 50 | 14 | 1 | 358 | 407 | 1 | 48 | 1.45e-13 | 65.9 |
| MS.gene51511.t1 | MTR_6g079950 | 41.791 | 67 | 38 | 1 | 370 | 436 | 1 | 66 | 1.62e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51511.t1 | AT5G51740 | 60.000 | 400 | 151 | 6 | 44 | 439 | 48 | 442 | 2.73e-175 | 498 |
| MS.gene51511.t1 | AT5G51740 | 60.000 | 400 | 151 | 6 | 44 | 439 | 91 | 485 | 9.71e-175 | 498 |
| MS.gene51511.t1 | AT5G51740 | 55.975 | 318 | 133 | 4 | 43 | 357 | 90 | 403 | 1.85e-128 | 377 |
Find 100 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAAAATAATAAGAATATT+AGG | 0.145873 | 3.4:+2859077 | MS.gene51511:CDS |
| ATGAGATTCTTGATGATAAA+TGG | 0.146030 | 3.4:+2859764 | MS.gene51511:CDS |
| TGGATTGAATTGGGAGATTT+TGG | 0.167567 | 3.4:+2859849 | MS.gene51511:CDS |
| TCTCAAGGTTGTAACTTTAA+TGG | 0.172006 | 3.4:+2859106 | MS.gene51511:CDS |
| TTTCTAAGATATTAGATAAA+AGG | 0.183661 | 3.4:+2859149 | MS.gene51511:CDS |
| ATCCTCACTCTTACACTTTC+AGG | 0.212835 | 3.4:-2859568 | None:intergenic |
| GGATTCTGAAACCAATTCTT+TGG | 0.281604 | 3.4:-2859349 | None:intergenic |
| GCAGAGATAGCAACTATTAT+TGG | 0.282923 | 3.4:+2859961 | MS.gene51511:CDS |
| CTCAAGGTTGTAACTTTAAT+GGG | 0.283856 | 3.4:+2859107 | MS.gene51511:CDS |
| TTTGAGATTAATAAGAATAT+TGG | 0.285361 | 3.4:+2859175 | MS.gene51511:CDS |
| GGTTCAGAAGAGTAGGAAAA+AGG | 0.286020 | 3.4:+2859786 | MS.gene51511:CDS |
| CCATCCAAATGTGACGTATT+AGG | 0.286467 | 3.4:-2859829 | None:intergenic |
| ATCTTCTTCTCCATCTCTTT+CGG | 0.290022 | 3.4:-2859481 | None:intergenic |
| CACATTTGGATGGATTGAAT+TGG | 0.299543 | 3.4:+2859839 | MS.gene51511:CDS |
| AAATGTGTTCTCTTCGTATA+AGG | 0.304300 | 3.4:-2859448 | None:intergenic |
| CCCAACTTCTCGTAGACTTT+AGG | 0.315746 | 3.4:-2863719 | None:intergenic |
| GTAAAGGTGTTAGCTTTAAT+AGG | 0.316218 | 3.4:+2859206 | MS.gene51511:CDS |
| TGGGAAGATAGTTGTGTTTA+CGG | 0.319349 | 3.4:+2859912 | MS.gene51511:CDS |
| AACCAATTCTTTGGCCCTCT+TGG | 0.319495 | 3.4:-2859340 | None:intergenic |
| TGGTGTTGAAGGATTTCTTT+AGG | 0.322830 | 3.4:+2863877 | MS.gene51511:CDS |
| ACACTTTCAGGGTGCATTGC+AGG | 0.341748 | 3.4:-2859556 | None:intergenic |
| TTGAGATTAATAAGAATATT+GGG | 0.342471 | 3.4:+2859176 | MS.gene51511:CDS |
| TGAAAATAATAAGAATATTA+GGG | 0.346615 | 3.4:+2859078 | MS.gene51511:CDS |
| ATTTCAAGAGATTAGACAAC+AGG | 0.356427 | 3.4:+2859248 | MS.gene51511:CDS |
| ATTGGTATAGTGGTTGGTTC+TGG | 0.359308 | 3.4:+2859385 | MS.gene51511:CDS |
| TACTGTGTTTGGTGAAGAAA+AGG | 0.364696 | 3.4:+2859675 | MS.gene51511:CDS |
| AGCCAAGAGGGCCAAAGAAT+TGG | 0.368828 | 3.4:+2859338 | MS.gene51511:CDS |
| AAGAAAACGAGCAGAATTAC+TGG | 0.372401 | 3.4:+2863796 | MS.gene51511:CDS |
| AAGAGATGGAGAAGAAGATT+GGG | 0.386070 | 3.4:+2859485 | MS.gene51511:CDS |
| CATCCCCTCAGCACTGTGTC+TGG | 0.390785 | 3.4:-2860353 | None:intergenic |
| GAGGGAAAGTTGAAGGGAAT+TGG | 0.391132 | 3.4:+2859731 | MS.gene51511:CDS |
| TTCTAAGATATTAGATAAAA+GGG | 0.399166 | 3.4:+2859150 | MS.gene51511:CDS |
| CTATGTCATCACTTCTCTTA+CGG | 0.399194 | 3.4:+2860446 | MS.gene51511:CDS |
| GCTTCAGAAAATACTGTGTT+TGG | 0.401820 | 3.4:+2859664 | MS.gene51511:CDS |
| GGGAAGATAGTTGTGTTTAC+GGG | 0.403532 | 3.4:+2859913 | MS.gene51511:CDS |
| GACATAGTGTTGACAATATC+AGG | 0.403878 | 3.4:-2860430 | None:intergenic |
| TTTGAAGAGAGGGTTGAGTA+AGG | 0.405119 | 3.4:+2859615 | MS.gene51511:CDS |
| ACATTTGGATGGATTGAATT+GGG | 0.413686 | 3.4:+2859840 | MS.gene51511:CDS |
| ATTAATAAGAATATTGGGTT+GGG | 0.417432 | 3.4:+2859181 | MS.gene51511:CDS |
| AAAGAGATGGAGAAGAAGAT+TGG | 0.422292 | 3.4:+2859484 | MS.gene51511:CDS |
| AGAGAAGGACATGGTGTTGA+AGG | 0.427494 | 3.4:+2863866 | MS.gene51511:CDS |
| AGAATTGGTTTCAGAATCCT+AGG | 0.434255 | 3.4:+2859353 | MS.gene51511:CDS |
| GCAACCTAATACGTCACATT+TGG | 0.438474 | 3.4:+2859825 | MS.gene51511:CDS |
| TGAGATTCTTGATGATAAAT+GGG | 0.439908 | 3.4:+2859765 | MS.gene51511:CDS |
| GCATGTTATGATTGGTATAG+TGG | 0.453566 | 3.4:+2859375 | MS.gene51511:CDS |
| AATATTGGGTTGGGTTGTAA+AGG | 0.464328 | 3.4:+2859190 | MS.gene51511:CDS |
| ACCTAAAGTCTACGAGAAGT+TGG | 0.465177 | 3.4:+2863718 | MS.gene51511:CDS |
| TTGTTGAAGCTTTGAAGAGA+GGG | 0.466119 | 3.4:+2859605 | MS.gene51511:CDS |
| AATCCTAGGCATGTTATGAT+TGG | 0.472024 | 3.4:+2859367 | MS.gene51511:CDS |
| ACTGTGTTTGGTGAAGAAAA+GGG | 0.472337 | 3.4:+2859676 | MS.gene51511:CDS |
| ATCTAAAAGCTTAGAATCGC+CGG | 0.472748 | 3.4:-2863750 | None:intergenic |
| AGAATTACTGGCTCAAGCTC+AGG | 0.477979 | 3.4:+2863808 | MS.gene51511:CDS |
| TCCTCACTCTTACACTTTCA+GGG | 0.494164 | 3.4:-2859567 | None:intergenic |
| GATTAATAAGAATATTGGGT+TGG | 0.498993 | 3.4:+2859180 | MS.gene51511:CDS |
| GAAAGTGGAGGGAAAGTTGA+AGG | 0.499097 | 3.4:+2859724 | MS.gene51511:CDS |
| AATATTAGGGTTGGTTCTCA+AGG | 0.503963 | 3.4:+2859091 | MS.gene51511:CDS |
| CCTAATACGTCACATTTGGA+TGG | 0.504235 | 3.4:+2859829 | MS.gene51511:CDS |
| AATGATTACCTTCTGGAGAA+AGG | 0.507195 | 3.4:-2860472 | None:intergenic |
| ATTAGTGCATTGACTGAAAG+TGG | 0.507872 | 3.4:+2859709 | MS.gene51511:CDS |
| GTTATGATTGGTATAGTGGT+TGG | 0.507924 | 3.4:+2859379 | MS.gene51511:CDS |
| CCTAAAGTCTACGAGAAGTT+GGG | 0.509175 | 3.4:+2863719 | MS.gene51511:CDS |
| AATAATAAGAATATTAGGGT+TGG | 0.510133 | 3.4:+2859082 | MS.gene51511:CDS |
| AGGGGATGACAAAGAATATG+TGG | 0.517207 | 3.4:+2860368 | MS.gene51511:CDS |
| TTTGGTGGTGAATGATCCTA+TGG | 0.519554 | 3.4:+2859867 | MS.gene51511:CDS |
| TACGGCTTCCTTTCTCCAGA+AGG | 0.521905 | 3.4:+2860464 | MS.gene51511:CDS |
| GAGAGAGTTTGAGAAGATGA+AGG | 0.524062 | 3.4:+2859510 | MS.gene51511:CDS |
| ATAAATGGGTTCAGAAGAGT+AGG | 0.531439 | 3.4:+2859779 | MS.gene51511:CDS |
| CTTCCCACCAGGTAAGCAAA+AGG | 0.542507 | 3.4:-2859896 | None:intergenic |
| ATTGTTGAAGCTTTGAAGAG+AGG | 0.546244 | 3.4:+2859604 | MS.gene51511:CDS |
| AAGTTGAAGGGAATTGGCAT+CGG | 0.548246 | 3.4:+2859737 | MS.gene51511:CDS |
| AGTTGAAGGGAATTGGCATC+GGG | 0.552278 | 3.4:+2859738 | MS.gene51511:CDS |
| CTTCTATTAGTTGCATCCGC+CGG | 0.553436 | 3.4:+2863677 | MS.gene51511:CDS |
| AAGCAAAAGGCATTAACCAT+AGG | 0.561244 | 3.4:-2859883 | None:intergenic |
| AGAGATGGAGAAGAAGATTG+GGG | 0.562312 | 3.4:+2859486 | MS.gene51511:CDS |
| TGCCACACGTGGATCATAGC+CGG | 0.567918 | 3.4:-2863696 | None:intergenic |
| ATACCAATCATAACATGCCT+AGG | 0.568681 | 3.4:-2859370 | None:intergenic |
| GAAATTGAAGCTGATTACAT+TGG | 0.569179 | 3.4:+2863653 | MS.gene51511:CDS |
| GTGGCCAGACACAGTGCTGA+GGG | 0.570445 | 3.4:+2860349 | MS.gene51511:CDS |
| GGTTGAGTAAGGAGAATGTG+TGG | 0.571308 | 3.4:+2859626 | MS.gene51511:CDS |
| CTGTGTTTGGTGAAGAAAAG+GGG | 0.574536 | 3.4:+2859677 | MS.gene51511:CDS |
| ACTGGCTCAAGCTCAGGTGA+TGG | 0.577941 | 3.4:+2863814 | MS.gene51511:CDS |
| AGCAACTATTATTGGACATG+AGG | 0.602186 | 3.4:+2859969 | MS.gene51511:CDS |
| AAAGTGGAGGGAAAGTTGAA+GGG | 0.608573 | 3.4:+2859725 | MS.gene51511:CDS |
| AACACAACTATCTTCCCACC+AGG | 0.619918 | 3.4:-2859907 | None:intergenic |
| GTGCATTGACTGAAAGTGGA+GGG | 0.623353 | 3.4:+2859713 | MS.gene51511:CDS |
| ATATATAAGAATGTAAGAGA+AGG | 0.642352 | 3.4:+2863851 | MS.gene51511:CDS |
| TTTCAAGAGATTAGACAACA+GGG | 0.648905 | 3.4:+2859249 | MS.gene51511:CDS |
| GGGGATGACAAAGAATATGT+GGG | 0.650366 | 3.4:+2860369 | MS.gene51511:CDS |
| GTTTGGTGAAGAAAAGGGGA+AGG | 0.654958 | 3.4:+2859681 | MS.gene51511:CDS |
| TGTGGCCAGACACAGTGCTG+AGG | 0.662397 | 3.4:+2860348 | MS.gene51511:CDS |
| TAATTAGGTTGGACATGCTG+TGG | 0.665392 | 3.4:+2860330 | MS.gene51511:intron |
| CGCCGGCTATGATCCACGTG+TGG | 0.667943 | 3.4:+2863694 | MS.gene51511:CDS |
| TTCAAGAGATTAGACAACAG+GGG | 0.668530 | 3.4:+2859250 | MS.gene51511:CDS |
| ATGTGGATCCTCAAAATGTG+CGG | 0.671867 | 3.4:+2859308 | MS.gene51511:CDS |
| AGTGCATTGACTGAAAGTGG+AGG | 0.673147 | 3.4:+2859712 | MS.gene51511:CDS |
| TAGACTTTAGGTGCCACACG+TGG | 0.678929 | 3.4:-2863707 | None:intergenic |
| AAGAATGTAAGAGAAGGACA+TGG | 0.701425 | 3.4:+2863857 | MS.gene51511:CDS |
| TGGCCAGACACAGTGCTGAG+GGG | 0.712731 | 3.4:+2860350 | MS.gene51511:CDS |
| CACACGTGGATCATAGCCGG+CGG | 0.724278 | 3.4:-2863693 | None:intergenic |
| ACCCTGAAAGTGTAAGAGTG+AGG | 0.750161 | 3.4:+2859566 | MS.gene51511:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAAATAAAAAAAAAAGTTA+CGG | + | chr3.4:2861116-2861135 | MS.gene51511:intron | 10.0% |
| !! | TGAAAATAATAAGAATATTA+GGG | + | chr3.4:2859078-2859097 | MS.gene51511:CDS | 10.0% |
| !!! | AAAAATGTTTATAGAAATTT+TGG | + | chr3.4:2861202-2861221 | MS.gene51511:intron | 10.0% |
| !!! | AAAATGTTTATAGAAATTTT+GGG | + | chr3.4:2861203-2861222 | MS.gene51511:intron | 10.0% |
| !!! | AATTTTGATTTATCATATAT+TGG | + | chr3.4:2862739-2862758 | MS.gene51511:intron | 10.0% |
| !!! | GGTAAAATTTTTTTTTTTTA+CGG | + | chr3.4:2861094-2861113 | MS.gene51511:intron | 10.0% |
| !!! | TTTTTGATTTTTTTATTTGT+GGG | + | chr3.4:2861236-2861255 | MS.gene51511:intron | 10.0% |
| !! | AAAATGTACAAATGTAAAAT+TGG | - | chr3.4:2863221-2863240 | None:intergenic | 15.0% |
| !! | CTAATTGAACAAAATTATTT+GGG | + | chr3.4:2860884-2860903 | MS.gene51511:intron | 15.0% |
| !! | GTGAAAATAATAAGAATATT+AGG | + | chr3.4:2859077-2859096 | MS.gene51511:CDS | 15.0% |
| !! | TAATTGAACAAAATTATTTG+GGG | + | chr3.4:2860885-2860904 | MS.gene51511:intron | 15.0% |
| !! | TATAAAATCAACTTATTTGT+GGG | + | chr3.4:2860918-2860937 | MS.gene51511:intron | 15.0% |
| !! | TTGAGATTAATAAGAATATT+GGG | + | chr3.4:2859176-2859195 | MS.gene51511:CDS | 15.0% |
| !!! | AAATAAGTTGATTTTATAGT+GGG | - | chr3.4:2860916-2860935 | None:intergenic | 15.0% |
| !!! | AAATAATTTTGTTCAATTAG+GGG | - | chr3.4:2860884-2860903 | None:intergenic | 15.0% |
| !!! | AAATGTTTATAGAAATTTTG+GGG | + | chr3.4:2861204-2861223 | MS.gene51511:intron | 15.0% |
| !!! | ATAAATTTTACTTGAATTAG+TGG | + | chr3.4:2860656-2860675 | MS.gene51511:intron | 15.0% |
| !!! | CAAATAATTTTGTTCAATTA+GGG | - | chr3.4:2860885-2860904 | None:intergenic | 15.0% |
| !!! | CTTTTTGATTTTTTTATTTG+TGG | + | chr3.4:2861235-2861254 | MS.gene51511:intron | 15.0% |
| !!! | GGGTAAAAAAAAAAATTTTA+CGG | + | chr3.4:2860971-2860990 | MS.gene51511:intron | 15.0% |
| !!! | TAAGATACTATTGATTAAAA+TGG | + | chr3.4:2861851-2861870 | MS.gene51511:intron | 15.0% |
| !!! | TACGGTAAAATAATTTTTTT+GGG | + | chr3.4:2861040-2861059 | MS.gene51511:intron | 15.0% |
| !!! | TTACGGTAAAATAATTTTTT+TGG | + | chr3.4:2861039-2861058 | MS.gene51511:intron | 15.0% |
| !!! | TTACGGTAAAATTTTTTTTT+GGG | + | chr3.4:2861133-2861152 | MS.gene51511:intron | 15.0% |
| !!! | TTCTAAGATATTAGATAAAA+GGG | + | chr3.4:2859150-2859169 | MS.gene51511:CDS | 15.0% |
| !!! | TTTCTAAGATATTAGATAAA+AGG | + | chr3.4:2859149-2859168 | MS.gene51511:CDS | 15.0% |
| !!! | TTTGAGATTAATAAGAATAT+TGG | + | chr3.4:2859175-2859194 | MS.gene51511:CDS | 15.0% |
| !!! | TTTTTATAACTGTGTATTTT+GGG | + | chr3.4:2859410-2859429 | MS.gene51511:CDS | 15.0% |
| !! | AAGTGAAAAACATGAAATTA+GGG | + | chr3.4:2860624-2860643 | MS.gene51511:intron | 20.0% |
| !! | AATAATAAGAATATTAGGGT+TGG | + | chr3.4:2859082-2859101 | MS.gene51511:CDS | 20.0% |
| !! | ATAAATTAAGGATTGAAAAC+AGG | - | chr3.4:2862668-2862687 | None:intergenic | 20.0% |
| !! | ATATATAAGAATGTAAGAGA+AGG | + | chr3.4:2863851-2863870 | MS.gene51511:CDS | 20.0% |
| !! | ATTAATAAGAATATTGGGTT+GGG | + | chr3.4:2859181-2859200 | MS.gene51511:CDS | 20.0% |
| !! | CCTAATTGAACAAAATTATT+TGG | + | chr3.4:2860883-2860902 | MS.gene51511:intron | 20.0% |
| !! | CTATAAAATCAACTTATTTG+TGG | + | chr3.4:2860917-2860936 | MS.gene51511:intron | 20.0% |
| !! | GAACAAAACAAAAATTCAAT+TGG | - | chr3.4:2860518-2860537 | None:intergenic | 20.0% |
| !! | TAATTTACAAAAAAACTTGC+AGG | - | chr3.4:2862464-2862483 | None:intergenic | 20.0% |
| !! | TATGAATACTTAAATGTTCT+TGG | + | chr3.4:2863117-2863136 | MS.gene51511:intron | 20.0% |
| !! | TGATAATTCACAAAACAAAA+AGG | - | chr3.4:2861278-2861297 | None:intergenic | 20.0% |
| !! | TGGTATTCTTGTATAAATTA+AGG | - | chr3.4:2862680-2862699 | None:intergenic | 20.0% |
| !!! | AAAAAAAAAAATTTTACCCC+AGG | - | chr3.4:2861092-2861111 | None:intergenic | 20.0% |
| !!! | AAAAAAAAAAGGTTGCATTT+TGG | + | chr3.4:2861575-2861594 | MS.gene51511:intron | 20.0% |
| !!! | AATTTTACGGTAAAAAATTC+CGG | + | chr3.4:2860984-2861003 | MS.gene51511:intron | 20.0% |
| !!! | ACAACAATGATAAGTTTTTA+TGG | - | chr3.4:2862824-2862843 | None:intergenic | 20.0% |
| !!! | ACAGTATTTTTGTTTATACT+TGG | - | chr3.4:2863524-2863543 | None:intergenic | 20.0% |
| !!! | ACGGTAAAATAATTTTTTTG+GGG | + | chr3.4:2861041-2861060 | MS.gene51511:intron | 20.0% |
| !!! | ATATATTTTCTCTTAAAGTG+TGG | - | chr3.4:2861768-2861787 | None:intergenic | 20.0% |
| !!! | ATTTTAACTATACACAAATG+TGG | + | chr3.4:2863545-2863564 | MS.gene51511:intron | 20.0% |
| !!! | ATTTTGGCCTTTTATTATTT+CGG | + | chr3.4:2861591-2861610 | MS.gene51511:intron | 20.0% |
| !!! | CAAATAAGTTGATTTTATAG+TGG | - | chr3.4:2860917-2860936 | None:intergenic | 20.0% |
| !!! | CAGTATTTTTGTTTATACTT+GGG | - | chr3.4:2863523-2863542 | None:intergenic | 20.0% |
| !!! | CCAAATAATTTTGTTCAATT+AGG | - | chr3.4:2860886-2860905 | None:intergenic | 20.0% |
| !!! | GGGTAAAAACAAATTTTTTA+CGG | + | chr3.4:2861022-2861041 | MS.gene51511:intron | 20.0% |
| !!! | GTTACGGTAAAATTTTTTTT+TGG | + | chr3.4:2861132-2861151 | MS.gene51511:intron | 20.0% |
| !!! | GTTTTTATAACTGTGTATTT+TGG | + | chr3.4:2859409-2859428 | MS.gene51511:CDS | 20.0% |
| !!! | TACGGTAAAATTTTTTTTTG+GGG | + | chr3.4:2861134-2861153 | MS.gene51511:intron | 20.0% |
| !!! | TTGAAGTTAATACGAATTTT+AGG | + | chr3.4:2859275-2859294 | MS.gene51511:CDS | 20.0% |
| !!! | TTGGGGTAAAATTTATTTTT+GGG | + | chr3.4:2861151-2861170 | MS.gene51511:intron | 20.0% |
| !!! | TTTGATTCGTTTAACTTATT+AGG | + | chr3.4:2859998-2860017 | MS.gene51511:intron | 20.0% |
| !!! | TTTGGGGTAAAATTTATTTT+TGG | + | chr3.4:2861150-2861169 | MS.gene51511:intron | 20.0% |
| ! | AAATGAAGTTTCTTCTTAGA+GGG | - | chr3.4:2862423-2862442 | None:intergenic | 25.0% |
| ! | AAATTGCAATTCGTATTTAG+AGG | - | chr3.4:2862724-2862743 | None:intergenic | 25.0% |
| ! | AATAGAAGAATTCATTGTGA+AGG | - | chr3.4:2860776-2860795 | None:intergenic | 25.0% |
| ! | AATTGGTTATAAAGAGACAA+CGG | - | chr3.4:2860501-2860520 | None:intergenic | 25.0% |
| ! | AGAGATTAAAAGAAAACCTT+TGG | - | chr3.4:2863343-2863362 | None:intergenic | 25.0% |
| ! | ATGATAAAACCTTTCATCTA+AGG | + | chr3.4:2862972-2862991 | MS.gene51511:intron | 25.0% |
| ! | ATTATGTGATCTTTCATAAG+GGG | + | chr3.4:2861922-2861941 | MS.gene51511:intron | 25.0% |
| ! | CATATGCAAATGAATTACAT+TGG | - | chr3.4:2863101-2863120 | None:intergenic | 25.0% |
| ! | CATTATGTGATCTTTCATAA+GGG | + | chr3.4:2861921-2861940 | MS.gene51511:intron | 25.0% |
| ! | CTTATTTCAGTAGAAAAACT+TGG | - | chr3.4:2862244-2862263 | None:intergenic | 25.0% |
| ! | GAAGTGAAAAACATGAAATT+AGG | + | chr3.4:2860623-2860642 | MS.gene51511:intron | 25.0% |
| ! | GATTAATAAGAATATTGGGT+TGG | + | chr3.4:2859180-2859199 | MS.gene51511:CDS | 25.0% |
| ! | GGAAAATTGTGGAAAAAATT+GGG | - | chr3.4:2863627-2863646 | None:intergenic | 25.0% |
| ! | TAAGAAGAAACTTCATTTGT+AGG | + | chr3.4:2862425-2862444 | MS.gene51511:intron | 25.0% |
| ! | TACCCCAAAAAAAATTAATG+TGG | - | chr3.4:2860956-2860975 | None:intergenic | 25.0% |
| ! | TATGCATTGTTGTCTAATAT+CGG | + | chr3.4:2862484-2862503 | MS.gene51511:intron | 25.0% |
| ! | TCATTATGTGATCTTTCATA+AGG | + | chr3.4:2861920-2861939 | MS.gene51511:intron | 25.0% |
| ! | TGAATAACAAGAAACAATCA+TGG | - | chr3.4:2862339-2862358 | None:intergenic | 25.0% |
| ! | TGACAAAAGTAGTTATAAGT+AGG | + | chr3.4:2861689-2861708 | MS.gene51511:intron | 25.0% |
| ! | TGGAAAATTGTGGAAAAAAT+TGG | - | chr3.4:2863628-2863647 | None:intergenic | 25.0% |
| ! | TTCGCCAAAAGAAAAAAAAA+AGG | + | chr3.4:2861564-2861583 | MS.gene51511:intron | 25.0% |
| !! | AATGATAAGTTTTTATGGAG+AGG | - | chr3.4:2862819-2862838 | None:intergenic | 25.0% |
| !! | AATTTTGTTCCTTAGATGAA+AGG | - | chr3.4:2862984-2863003 | None:intergenic | 25.0% |
| !! | ATGAGATTCTTGATGATAAA+TGG | + | chr3.4:2859764-2859783 | MS.gene51511:CDS | 25.0% |
| !! | ATGATAAGTTTTTATGGAGA+GGG | - | chr3.4:2862818-2862837 | None:intergenic | 25.0% |
| !! | CATTTAAATCTGTTTCTTGT+TGG | + | chr3.4:2863304-2863323 | MS.gene51511:intron | 25.0% |
| !! | TGAGATTCTTGATGATAAAT+GGG | + | chr3.4:2859765-2859784 | MS.gene51511:CDS | 25.0% |
| !! | TTTAACTTATTAGGCTTGTT+TGG | + | chr3.4:2860007-2860026 | MS.gene51511:intron | 25.0% |
| !! | TTTTGCAGTTTAACATGTTT+AGG | + | chr3.4:2860277-2860296 | MS.gene51511:intron | 25.0% |
| !!! | AAGGCCACATTAATTTTTTT+TGG | + | chr3.4:2860949-2860968 | MS.gene51511:intron | 25.0% |
| !!! | AATTAATGTGGCCTTTTTTT+AGG | - | chr3.4:2860944-2860963 | None:intergenic | 25.0% |
| !!! | AATTTTTTCCACAATTTTCC+AGG | + | chr3.4:2863627-2863646 | MS.gene51511:intron | 25.0% |
| !!! | AGGCCACATTAATTTTTTTT+GGG | + | chr3.4:2860950-2860969 | MS.gene51511:intron | 25.0% |
| !!! | ATTCCGGTAATTTTTTTTTC+TGG | + | chr3.4:2861000-2861019 | MS.gene51511:intron | 25.0% |
| !!! | CATATGTACATTTTTTGTGT+TGG | + | chr3.4:2862598-2862617 | MS.gene51511:intron | 25.0% |
| !!! | GCAACCTTTTTTTTTTCTTT+TGG | - | chr3.4:2861571-2861590 | None:intergenic | 25.0% |
| !!! | TACTTATAACTACTTTTGTC+AGG | - | chr3.4:2861690-2861709 | None:intergenic | 25.0% |
| !!! | TGGGGTAAAATTTATTTTTG+GGG | + | chr3.4:2861152-2861171 | MS.gene51511:intron | 25.0% |
| !!! | TGGTCATGGTATTTTTTTTA+TGG | - | chr3.4:2862700-2862719 | None:intergenic | 25.0% |
| !!! | TTAAGCTATTTTTGCAAACA+AGG | + | chr3.4:2860247-2860266 | MS.gene51511:intron | 25.0% |
| !!! | TTCCGGTAATTTTTTTTTCT+GGG | + | chr3.4:2861001-2861020 | MS.gene51511:intron | 25.0% |
| !!! | TTTTAGGAGATTATACTATG+TGG | + | chr3.4:2859291-2859310 | MS.gene51511:CDS | 25.0% |
| !!! | TTTTTGGGGTAAAAAAATTC+CGG | + | chr3.4:2861055-2861074 | MS.gene51511:intron | 25.0% |
| AAATGTGTTCTCTTCGTATA+AGG | - | chr3.4:2859451-2859470 | None:intergenic | 30.0% | |
| AATTTGTGAGTAGGCAATTA+TGG | - | chr3.4:2862909-2862928 | None:intergenic | 30.0% | |
| ACCCCAGAAAAAAAAATTAC+CGG | - | chr3.4:2861006-2861025 | None:intergenic | 30.0% | |
| AGGCTGTTAAAGAGATATTA+TGG | + | chr3.4:2860070-2860089 | MS.gene51511:intron | 30.0% | |
| ATCTAAGGAACAAAATTCTG+TGG | + | chr3.4:2862987-2863006 | MS.gene51511:intron | 30.0% | |
| ATTTCAAGAGATTAGACAAC+AGG | + | chr3.4:2859248-2859267 | MS.gene51511:CDS | 30.0% | |
| CAAATGAAGTTTCTTCTTAG+AGG | - | chr3.4:2862424-2862443 | None:intergenic | 30.0% | |
| CTCAAGGTTGTAACTTTAAT+GGG | + | chr3.4:2859107-2859126 | MS.gene51511:CDS | 30.0% | |
| CTTAAGCGCTTATATGATAT+AGG | + | chr3.4:2860204-2860223 | MS.gene51511:intron | 30.0% | |
| GAAATTGAAGCTGATTACAT+TGG | + | chr3.4:2863653-2863672 | MS.gene51511:CDS | 30.0% | |
| GACTCATTTCATTGATACAT+AGG | + | chr3.4:2860551-2860570 | MS.gene51511:intron | 30.0% | |
| GCAAGGAATTAATGCAAATA+TGG | - | chr3.4:2862936-2862955 | None:intergenic | 30.0% | |
| GCTACATGACTAAACATATA+GGG | - | chr3.4:2860739-2860758 | None:intergenic | 30.0% | |
| TAATTCCTTGCTTAGTAGTA+AGG | + | chr3.4:2862945-2862964 | MS.gene51511:intron | 30.0% | |
| TCGAAATCGTAAATTGTTGT+GGG | + | chr3.4:2862172-2862191 | MS.gene51511:intron | 30.0% | |
| TCTATAATATCCTAGAGAGT+AGG | - | chr3.4:2863153-2863172 | None:intergenic | 30.0% | |
| TCTCAAGGTTGTAACTTTAA+TGG | + | chr3.4:2859106-2859125 | MS.gene51511:CDS | 30.0% | |
| TGAAATTGGTTGAATCACAA+TGG | + | chr3.4:2861826-2861845 | MS.gene51511:intron | 30.0% | |
| TGCTACATGACTAAACATAT+AGG | - | chr3.4:2860740-2860759 | None:intergenic | 30.0% | |
| TTATTTGTGGGCCTAAAAAA+AGG | + | chr3.4:2860930-2860949 | MS.gene51511:intron | 30.0% | |
| TTTCAAGAGATTAGACAACA+GGG | + | chr3.4:2859249-2859268 | MS.gene51511:CDS | 30.0% | |
| TTTGTTAGACAGGTTAGAAT+AGG | + | chr3.4:2860579-2860598 | MS.gene51511:intron | 30.0% | |
| ! | AAGATGAAGGCAGATTTTAA+GGG | + | chr3.4:2859523-2859542 | MS.gene51511:CDS | 30.0% |
| ! | AATTAGGGGCTTTAATTTAG+TGG | - | chr3.4:2860870-2860889 | None:intergenic | 30.0% |
| ! | ATAGGTAATGTTTGTTAGAC+AGG | + | chr3.4:2860569-2860588 | MS.gene51511:intron | 30.0% |
| ! | ATTAGGGGCTTTAATTTAGT+GGG | - | chr3.4:2860869-2860888 | None:intergenic | 30.0% |
| ! | TATGGATGTAATTTGTGAGT+AGG | - | chr3.4:2862918-2862937 | None:intergenic | 30.0% |
| ! | TGTTGGTTAGATAGTCAAAA+TGG | - | chr3.4:2863434-2863453 | None:intergenic | 30.0% |
| ! | TTTCTCTTAAAGTGTGGTTT+TGG | - | chr3.4:2861762-2861781 | None:intergenic | 30.0% |
| !! | AACTGTGTATTTTGGGAATA+TGG | + | chr3.4:2859417-2859436 | MS.gene51511:CDS | 30.0% |
| !! | ACATTTGGATGGATTGAATT+GGG | + | chr3.4:2859840-2859859 | MS.gene51511:CDS | 30.0% |
| !! | GTAAAGGTGTTAGCTTTAAT+AGG | + | chr3.4:2859206-2859225 | MS.gene51511:CDS | 30.0% |
| !! | TCAGTGTAATGGATTAAAGA+TGG | - | chr3.4:2862544-2862563 | None:intergenic | 30.0% |
| !!! | ATTCCGGTAAATTTTTTTCC+TGG | + | chr3.4:2861071-2861090 | MS.gene51511:intron | 30.0% |
| !!! | GCTTCATTTTAACTTCTTTG+TGG | + | chr3.4:2863382-2863401 | MS.gene51511:intron | 30.0% |
| !!! | GGCCACATTAATTTTTTTTG+GGG | + | chr3.4:2860951-2860970 | MS.gene51511:intron | 30.0% |
| !!! | TCATGTAGCAATGTTGTTTT+TGG | + | chr3.4:2860750-2860769 | MS.gene51511:intron | 30.0% |
| !!! | TCCGGTAATTTTTTTTTCTG+GGG | + | chr3.4:2861002-2861021 | MS.gene51511:intron | 30.0% |
| !!! | TTATAGAAATTTTGGGGCTT+GGG | + | chr3.4:2861210-2861229 | MS.gene51511:intron | 30.0% |
| !!! | TTCCGGTAAATTTTTTTCCT+GGG | + | chr3.4:2861072-2861091 | MS.gene51511:intron | 30.0% |
| !!! | TTTATAGAAATTTTGGGGCT+TGG | + | chr3.4:2861209-2861228 | MS.gene51511:intron | 30.0% |
| AAACACAAACGCTAACTAGA+CGG | + | chr3.4:2862034-2862053 | MS.gene51511:intron | 35.0% | |
| AAAGAGATGGAGAAGAAGAT+TGG | + | chr3.4:2859484-2859503 | MS.gene51511:CDS | 35.0% | |
| AACATTTCTCTTTCAGCACT+TGG | + | chr3.4:2862627-2862646 | MS.gene51511:intron | 35.0% | |
| AAGAAAACGAGCAGAATTAC+TGG | + | chr3.4:2863796-2863815 | MS.gene51511:CDS | 35.0% | |
| AAGAATGTAAGAGAAGGACA+TGG | + | chr3.4:2863857-2863876 | MS.gene51511:CDS | 35.0% | |
| AAGAGATGGAGAAGAAGATT+GGG | + | chr3.4:2859485-2859504 | MS.gene51511:CDS | 35.0% | |
| AATCCTAGGCATGTTATGAT+TGG | + | chr3.4:2859367-2859386 | MS.gene51511:CDS | 35.0% | |
| ACAAAAAAACTTGCAGGCAT+GGG | - | chr3.4:2862458-2862477 | None:intergenic | 35.0% | |
| ACCCCAGGAAAAAAATTTAC+CGG | - | chr3.4:2861077-2861096 | None:intergenic | 35.0% | |
| ACTTGAATTAGTGGAACTAG+AGG | + | chr3.4:2860665-2860684 | MS.gene51511:intron | 35.0% | |
| AGCAACTATTATTGGACATG+AGG | + | chr3.4:2859969-2859988 | MS.gene51511:CDS | 35.0% | |
| ATACCAATCATAACATGCCT+AGG | - | chr3.4:2859373-2859392 | None:intergenic | 35.0% | |
| ATCTAAAAGCTTAGAATCGC+CGG | - | chr3.4:2863753-2863772 | None:intergenic | 35.0% | |
| ATCTTCTTCTCCATCTCTTT+CGG | - | chr3.4:2859484-2859503 | None:intergenic | 35.0% | |
| ATGTAGAGCTGTCAATATCA+TGG | - | chr3.4:2861342-2861361 | None:intergenic | 35.0% | |
| ATTTCCATCCTGGAAAATTG+TGG | - | chr3.4:2863638-2863657 | None:intergenic | 35.0% | |
| CATGTGTCTCAGCTTAAAAA+GGG | - | chr3.4:2862386-2862405 | None:intergenic | 35.0% | |
| CTATGTCATCACTTCTCTTA+CGG | + | chr3.4:2860446-2860465 | MS.gene51511:CDS | 35.0% | |
| GAAGACTGATCGATAAAACA+GGG | + | chr3.4:2861894-2861913 | MS.gene51511:intron | 35.0% | |
| GAGAAGTTGGGAAAAATATC+CGG | + | chr3.4:2863731-2863750 | MS.gene51511:CDS | 35.0% | |
| GCAGAGATAGCAACTATTAT+TGG | + | chr3.4:2859961-2859980 | MS.gene51511:CDS | 35.0% | |
| GCATGTTATGATTGGTATAG+TGG | + | chr3.4:2859375-2859394 | MS.gene51511:CDS | 35.0% | |
| GCTTCAGAAAATACTGTGTT+TGG | + | chr3.4:2859664-2859683 | MS.gene51511:CDS | 35.0% | |
| GCTTTCAAAGTTGAAGTGTA+CGG | + | chr3.4:2861802-2861821 | MS.gene51511:intron | 35.0% | |
| GGATTAAAGATGGAAAACCA+TGG | - | chr3.4:2862534-2862553 | None:intergenic | 35.0% | |
| GTAAAGCAGTGTAACTCAAA+GGG | - | chr3.4:2862851-2862870 | None:intergenic | 35.0% | |
| GTATGTTAGCGTAGTTTCAA+TGG | + | chr3.4:2863187-2863206 | MS.gene51511:intron | 35.0% | |
| GTCGAAATCGTAAATTGTTG+TGG | + | chr3.4:2862171-2862190 | MS.gene51511:intron | 35.0% | |
| GTTATGATTGGTATAGTGGT+TGG | + | chr3.4:2859379-2859398 | MS.gene51511:CDS | 35.0% | |
| GTTCAGAAGAGTAGGAAAAA+GGG | + | chr3.4:2859787-2859806 | MS.gene51511:CDS | 35.0% | |
| TACAAAAAAACTTGCAGGCA+TGG | - | chr3.4:2862459-2862478 | None:intergenic | 35.0% | |
| TACACAAATGTGGTGAATGA+TGG | + | chr3.4:2863555-2863574 | MS.gene51511:intron | 35.0% | |
| TACTGCAGAATTTATGCATC+AGG | - | chr3.4:2862873-2862892 | None:intergenic | 35.0% | |
| TGAAGACTGATCGATAAAAC+AGG | + | chr3.4:2861893-2861912 | MS.gene51511:intron | 35.0% | |
| TGATACCTTACTACTAAGCA+AGG | - | chr3.4:2862953-2862972 | None:intergenic | 35.0% | |
| TGCAATTCGTATTTAGAGGT+TGG | - | chr3.4:2862720-2862739 | None:intergenic | 35.0% | |
| TGGGAAGATAGTTGTGTTTA+CGG | + | chr3.4:2859912-2859931 | MS.gene51511:CDS | 35.0% | |
| TTAACTCAGCCGTACAAAAT+CGG | - | chr3.4:2861738-2861757 | None:intergenic | 35.0% | |
| TTCAAGAGATTAGACAACAG+GGG | + | chr3.4:2859250-2859269 | MS.gene51511:CDS | 35.0% | |
| TTGAAGTGTACGGTTGAAAT+TGG | + | chr3.4:2861812-2861831 | MS.gene51511:intron | 35.0% | |
| ! | AATGATTACCTTCTGGAGAA+AGG | - | chr3.4:2860475-2860494 | None:intergenic | 35.0% |
| ! | ACTGTGTTTGGTGAAGAAAA+GGG | + | chr3.4:2859676-2859695 | MS.gene51511:CDS | 35.0% |
| ! | AGAATTGGTTTCAGAATCCT+AGG | + | chr3.4:2859353-2859372 | MS.gene51511:CDS | 35.0% |
| ! | AGATGAAGGCAGATTTTAAG+GGG | + | chr3.4:2859524-2859543 | MS.gene51511:CDS | 35.0% |
| ! | AGTGCTGAAAGAGAAATGTT+CGG | - | chr3.4:2862627-2862646 | None:intergenic | 35.0% |
| ! | ATAAATGGGTTCAGAAGAGT+AGG | + | chr3.4:2859779-2859798 | MS.gene51511:CDS | 35.0% |
| ! | ATTGAATTGGGAGATTTTGG+TGG | + | chr3.4:2859852-2859871 | MS.gene51511:CDS | 35.0% |
| ! | GAAGATGAAGGCAGATTTTA+AGG | + | chr3.4:2859522-2859541 | MS.gene51511:CDS | 35.0% |
| ! | TACTGTGTTTGGTGAAGAAA+AGG | + | chr3.4:2859675-2859694 | MS.gene51511:CDS | 35.0% |
| ! | TGGATTGAATTGGGAGATTT+TGG | + | chr3.4:2859849-2859868 | MS.gene51511:CDS | 35.0% |
| ! | TGGGATCGTAACATAGATTT+TGG | + | chr3.4:2862191-2862210 | MS.gene51511:intron | 35.0% |
| ! | TTAAAATGCCGCACATTTTG+AGG | - | chr3.4:2859319-2859338 | None:intergenic | 35.0% |
| ! | TTTTCCACAATTTTCCAGGA+TGG | + | chr3.4:2863631-2863650 | MS.gene51511:intron | 35.0% |
| !! | AAGCAAAAGGCATTAACCAT+AGG | - | chr3.4:2859886-2859905 | None:intergenic | 35.0% |
| !! | AATATTAGGGTTGGTTCTCA+AGG | + | chr3.4:2859091-2859110 | MS.gene51511:CDS | 35.0% |
| !! | AATATTGGGTTGGGTTGTAA+AGG | + | chr3.4:2859190-2859209 | MS.gene51511:CDS | 35.0% |
| !! | AATTGACAGCTCTAGTCTTA+TGG | - | chr3.4:2860803-2860822 | None:intergenic | 35.0% |
| !! | ATTAGTGCATTGACTGAAAG+TGG | + | chr3.4:2859709-2859728 | MS.gene51511:CDS | 35.0% |
| !! | ATTGTTGAAGCTTTGAAGAG+AGG | + | chr3.4:2859604-2859623 | MS.gene51511:CDS | 35.0% |
| !! | CACATTTGGATGGATTGAAT+TGG | + | chr3.4:2859839-2859858 | MS.gene51511:CDS | 35.0% |
| !! | CTTTTTAAGCTGAGACACAT+GGG | + | chr3.4:2862385-2862404 | MS.gene51511:intron | 35.0% |
| !! | GACATAGTGTTGACAATATC+AGG | - | chr3.4:2860433-2860452 | None:intergenic | 35.0% |
| !! | GGATTCTGAAACCAATTCTT+TGG | - | chr3.4:2859352-2859371 | None:intergenic | 35.0% |
| !! | TCAAGTGGGCTTTGAAATTT+GGG | - | chr3.4:2860830-2860849 | None:intergenic | 35.0% |
| !! | TTCAAGTGGGCTTTGAAATT+TGG | - | chr3.4:2860831-2860850 | None:intergenic | 35.0% |
| !! | TTGTTGAAGCTTTGAAGAGA+GGG | + | chr3.4:2859605-2859624 | MS.gene51511:CDS | 35.0% |
| !! | TTTAATTTAGTGGGCTTGGT+GGG | - | chr3.4:2860860-2860879 | None:intergenic | 35.0% |
| !!! | AGTTGATTTTATAGTGGGCT+TGG | - | chr3.4:2860911-2860930 | None:intergenic | 35.0% |
| !!! | GATTTTGATTCCGAAAGAGA+TGG | + | chr3.4:2859471-2859490 | MS.gene51511:CDS | 35.0% |
| !!! | TATAGAAATTTTGGGGCTTG+GGG | + | chr3.4:2861211-2861230 | MS.gene51511:intron | 35.0% |
| !!! | TCCGGTAAATTTTTTTCCTG+GGG | + | chr3.4:2861073-2861092 | MS.gene51511:intron | 35.0% |
| AAAGTGGAGGGAAAGTTGAA+GGG | + | chr3.4:2859725-2859744 | MS.gene51511:CDS | 40.0% | |
| AAGAAACAATCATGGCTAGC+AGG | - | chr3.4:2862331-2862350 | None:intergenic | 40.0% | |
| AAGTTGAAGGGAATTGGCAT+CGG | + | chr3.4:2859737-2859756 | MS.gene51511:CDS | 40.0% | |
| ACCTAAAGTCTACGAGAAGT+TGG | + | chr3.4:2863718-2863737 | MS.gene51511:CDS | 40.0% | |
| AGAAACAATCATGGCTAGCA+GGG | - | chr3.4:2862330-2862349 | None:intergenic | 40.0% | |
| AGAAAGCCAACATATTGCCA+TGG | - | chr3.4:2862510-2862529 | None:intergenic | 40.0% | |
| AGAGATGGAGAAGAAGATTG+GGG | + | chr3.4:2859486-2859505 | MS.gene51511:CDS | 40.0% | |
| AGGGGATGACAAAGAATATG+TGG | + | chr3.4:2860368-2860387 | MS.gene51511:CDS | 40.0% | |
| AGTCATACCAAGTCCATACA+AGG | - | chr3.4:2861519-2861538 | None:intergenic | 40.0% | |
| AGTTATGATGCCTACTCTCT+AGG | + | chr3.4:2863140-2863159 | MS.gene51511:intron | 40.0% | |
| ATCAGCTTCAATTTCCATCC+TGG | - | chr3.4:2863648-2863667 | None:intergenic | 40.0% | |
| ATCCTCACTCTTACACTTTC+AGG | - | chr3.4:2859571-2859590 | None:intergenic | 40.0% | |
| ATGTGGATCCTCAAAATGTG+CGG | + | chr3.4:2859308-2859327 | MS.gene51511:CDS | 40.0% | |
| CCATCCAAATGTGACGTATT+AGG | - | chr3.4:2859832-2859851 | None:intergenic | 40.0% | |
| CCATGTGTCTCAGCTTAAAA+AGG | - | chr3.4:2862387-2862406 | None:intergenic | 40.0% | |
| CCTAAAGTCTACGAGAAGTT+GGG | + | chr3.4:2863719-2863738 | MS.gene51511:CDS | 40.0% | |
| CCTAATACGTCACATTTGGA+TGG | + | chr3.4:2859829-2859848 | MS.gene51511:CDS | 40.0% | |
| CGTGAGGCCGAAATAATAAA+AGG | - | chr3.4:2861601-2861620 | None:intergenic | 40.0% | |
| GACCACAATGAGTCTGATTT+CGG | + | chr3.4:2863243-2863262 | MS.gene51511:intron | 40.0% | |
| GAGAGAGTTTGAGAAGATGA+AGG | + | chr3.4:2859510-2859529 | MS.gene51511:CDS | 40.0% | |
| GCAACCTAATACGTCACATT+TGG | + | chr3.4:2859825-2859844 | MS.gene51511:CDS | 40.0% | |
| GGGAAGATAGTTGTGTTTAC+GGG | + | chr3.4:2859913-2859932 | MS.gene51511:CDS | 40.0% | |
| GGGGATGACAAAGAATATGT+GGG | + | chr3.4:2860369-2860388 | MS.gene51511:CDS | 40.0% | |
| GGTAAAGCAGTGTAACTCAA+AGG | - | chr3.4:2862852-2862871 | None:intergenic | 40.0% | |
| GGTTCAGAAGAGTAGGAAAA+AGG | + | chr3.4:2859786-2859805 | MS.gene51511:CDS | 40.0% | |
| TAACTCAGCCGTACAAAATC+GGG | - | chr3.4:2861737-2861756 | None:intergenic | 40.0% | |
| TCCTCACTCTTACACTTTCA+GGG | - | chr3.4:2859570-2859589 | None:intergenic | 40.0% | |
| TGCTTAAAAGTAGCCATGTC+AGG | - | chr3.4:2863460-2863479 | None:intergenic | 40.0% | |
| TGCTTGTAGAGTCAGTGTAA+TGG | - | chr3.4:2862555-2862574 | None:intergenic | 40.0% | |
| TGGTTATAAAGAGACAACGG+AGG | - | chr3.4:2860498-2860517 | None:intergenic | 40.0% | |
| TTGTTGTCTAATATCGGCCA+TGG | + | chr3.4:2862490-2862509 | MS.gene51511:intron | 40.0% | |
| TTTGAAGAGAGGGTTGAGTA+AGG | + | chr3.4:2859615-2859634 | MS.gene51511:CDS | 40.0% | |
| ! | ATCTGTTTCTTGTTGGACTG+TGG | + | chr3.4:2863311-2863330 | MS.gene51511:intron | 40.0% |
| ! | ATTGGTATAGTGGTTGGTTC+TGG | + | chr3.4:2859385-2859404 | MS.gene51511:CDS | 40.0% |
| ! | CACTTTCCTGCTTGGTAATT+AGG | + | chr3.4:2860315-2860334 | MS.gene51511:intron | 40.0% |
| ! | CTGTGTTTGGTGAAGAAAAG+GGG | + | chr3.4:2859677-2859696 | MS.gene51511:CDS | 40.0% |
| ! | GGTTGTTGAAGATGCTACTT+TGG | - | chr3.4:2862223-2862242 | None:intergenic | 40.0% |
| ! | GTTAATGCCTTTTGCTTACC+TGG | + | chr3.4:2859889-2859908 | MS.gene51511:CDS | 40.0% |
| ! | TATTTTGCCACTCATCCATC+TGG | + | chr3.4:2863773-2863792 | MS.gene51511:CDS | 40.0% |
| ! | TCGTATTTAGAGGTTGGTCA+TGG | - | chr3.4:2862714-2862733 | None:intergenic | 40.0% |
| ! | TGGACTGTGGATTATTCCAA+AGG | + | chr3.4:2863324-2863343 | MS.gene51511:intron | 40.0% |
| ! | TTCCTGCTTGGTAATTAGGT+TGG | + | chr3.4:2860319-2860338 | MS.gene51511:intron | 40.0% |
| ! | TTTTCTTCCAGATGGATGAG+TGG | - | chr3.4:2863783-2863802 | None:intergenic | 40.0% |
| !! | AATATGTTGGCTTTCTGCCA+TGG | + | chr3.4:2862514-2862533 | MS.gene51511:intron | 40.0% |
| !! | ACTTGTTTTCTGCACATCCT+CGG | + | chr3.4:2861490-2861509 | MS.gene51511:intron | 40.0% |
| !! | CAAGTGGGCTTTGAAATTTG+GGG | - | chr3.4:2860829-2860848 | None:intergenic | 40.0% |
| !! | CCTTTTTAAGCTGAGACACA+TGG | + | chr3.4:2862384-2862403 | MS.gene51511:intron | 40.0% |
| !! | CTTTAATTTAGTGGGCTTGG+TGG | - | chr3.4:2860861-2860880 | None:intergenic | 40.0% |
| !! | TAATTAGGTTGGACATGCTG+TGG | + | chr3.4:2860330-2860349 | MS.gene51511:intron | 40.0% |
| !! | TTAATTTAGTGGGCTTGGTG+GGG | - | chr3.4:2860859-2860878 | None:intergenic | 40.0% |
| !! | TTTGGTGGTGAATGATCCTA+TGG | + | chr3.4:2859867-2859886 | MS.gene51511:CDS | 40.0% |
| !!! | ATAGAAATTTTGGGGCTTGG+GGG | + | chr3.4:2861212-2861231 | MS.gene51511:intron | 40.0% |
| AACACAACTATCTTCCCACC+AGG | - | chr3.4:2859910-2859929 | None:intergenic | 45.0% | |
| AACCAATTCTTTGGCCCTCT+TGG | - | chr3.4:2859343-2859362 | None:intergenic | 45.0% | |
| ACGGAGGAATGATTACCTTC+TGG | - | chr3.4:2860482-2860501 | None:intergenic | 45.0% | |
| AGCAGGGAGATCATAAAGGT+CGG | - | chr3.4:2862285-2862304 | None:intergenic | 45.0% | |
| AGGGACGTCATAAAGATCGA+TGG | - | chr3.4:2862311-2862330 | None:intergenic | 45.0% | |
| AGTTGAAGGGAATTGGCATC+GGG | + | chr3.4:2859738-2859757 | MS.gene51511:CDS | 45.0% | |
| ATACCTGCTAAGCACTTCTG+AGG | + | chr3.4:2860050-2860069 | MS.gene51511:intron | 45.0% | |
| ATCAAGCCCCCTTACTATGT+GGG | + | chr3.4:2861294-2861313 | MS.gene51511:intron | 45.0% | |
| CAGTCTAACACTTTCCTGCT+TGG | + | chr3.4:2860307-2860326 | MS.gene51511:intron | 45.0% | |
| CCCAACTTCTCGTAGACTTT+AGG | - | chr3.4:2863722-2863741 | None:intergenic | 45.0% | |
| CTAACCAACATGTCCTGACA+TGG | + | chr3.4:2863444-2863463 | MS.gene51511:intron | 45.0% | |
| CTCCGAAATCAGACTCATTG+TGG | - | chr3.4:2863248-2863267 | None:intergenic | 45.0% | |
| CTTCTATTAGTTGCATCCGC+CGG | + | chr3.4:2863677-2863696 | MS.gene51511:CDS | 45.0% | |
| GAAAGTGGAGGGAAAGTTGA+AGG | + | chr3.4:2859724-2859743 | MS.gene51511:CDS | 45.0% | |
| GAAGAGTAGGAAAAAGGGTC+AGG | + | chr3.4:2859792-2859811 | MS.gene51511:CDS | 45.0% | |
| GAGGGAAAGTTGAAGGGAAT+TGG | + | chr3.4:2859731-2859750 | MS.gene51511:CDS | 45.0% | |
| GGGACGTCATAAAGATCGAT+GGG | - | chr3.4:2862310-2862329 | None:intergenic | 45.0% | |
| GGTTGAGTAAGGAGAATGTG+TGG | + | chr3.4:2859626-2859645 | MS.gene51511:CDS | 45.0% | |
| GTCCAACCTAATTACCAAGC+AGG | - | chr3.4:2860324-2860343 | None:intergenic | 45.0% | |
| TATCAAGCCCCCTTACTATG+TGG | + | chr3.4:2861293-2861312 | MS.gene51511:intron | 45.0% | |
| TATCGGCCATGGCAATATGT+TGG | + | chr3.4:2862501-2862520 | MS.gene51511:intron | 45.0% | |
| TTGTGGGCTTGCATCAATGT+GGG | + | chr3.4:2861252-2861271 | MS.gene51511:intron | 45.0% | |
| TTTGTGGGCTTGCATCAATG+TGG | + | chr3.4:2861251-2861270 | MS.gene51511:intron | 45.0% | |
| ! | AATGCCTTTTGCTTACCTGG+TGG | + | chr3.4:2859892-2859911 | MS.gene51511:CDS | 45.0% |
| ! | ACCCTGAAAGTGTAAGAGTG+AGG | + | chr3.4:2859566-2859585 | MS.gene51511:CDS | 45.0% |
| ! | AGAGAAGGACATGGTGTTGA+AGG | + | chr3.4:2863866-2863885 | MS.gene51511:CDS | 45.0% |
| ! | ATCATGGCGCCTTGAAGTTT+TGG | - | chr3.4:2861326-2861345 | None:intergenic | 45.0% |
| ! | ATGCCTTTTGCTTACCTGGT+GGG | + | chr3.4:2859893-2859912 | MS.gene51511:CDS | 45.0% |
| ! | CCGTACAAAATCGGGTTGTA+CGG | - | chr3.4:2861729-2861748 | None:intergenic | 45.0% |
| ! | CCGTACAACCCGATTTTGTA+CGG | + | chr3.4:2861726-2861745 | MS.gene51511:intron | 45.0% |
| ! | CGTGCTTGGTTATGCCATTT+GGG | - | chr3.4:2862788-2862807 | None:intergenic | 45.0% |
| ! | CTCTCGAGTCAACTCGTTTT+GGG | - | chr3.4:2861467-2861486 | None:intergenic | 45.0% |
| ! | GAAGCATTCGTTAGCCCAAA+TGG | + | chr3.4:2862771-2862790 | MS.gene51511:intron | 45.0% |
| ! | GTTTGGTGAAGAAAAGGGGA+AGG | + | chr3.4:2859681-2859700 | MS.gene51511:CDS | 45.0% |
| ! | TCTGCTCGTTTTCTTCCAGA+TGG | - | chr3.4:2863791-2863810 | None:intergenic | 45.0% |
| ! | TGCGGCATTTTAAGCCAAGA+GGG | + | chr3.4:2859326-2859345 | MS.gene51511:CDS | 45.0% |
| !! | AGAATTACTGGCTCAAGCTC+AGG | + | chr3.4:2863808-2863827 | MS.gene51511:CDS | 45.0% |
| !! | AGTGCATTGACTGAAAGTGG+AGG | + | chr3.4:2859712-2859731 | MS.gene51511:CDS | 45.0% |
| !! | ATAAAGATCGATGGGCTAGC+AGG | - | chr3.4:2862302-2862321 | None:intergenic | 45.0% |
| !! | GGGCTTTAATTTAGTGGGCT+TGG | - | chr3.4:2860864-2860883 | None:intergenic | 45.0% |
| !! | GTGCATTGACTGAAAGTGGA+GGG | + | chr3.4:2859713-2859732 | MS.gene51511:CDS | 45.0% |
| !! | TAAAGATCGATGGGCTAGCA+GGG | - | chr3.4:2862301-2862320 | None:intergenic | 45.0% |
| !! | TAATTTAGTGGGCTTGGTGG+GGG | - | chr3.4:2860858-2860877 | None:intergenic | 45.0% |
| ACACTTTCAGGGTGCATTGC+AGG | - | chr3.4:2859559-2859578 | None:intergenic | 50.0% | |
| ACATCCTCGGATGCCTTGTA+TGG | + | chr3.4:2861503-2861522 | MS.gene51511:intron | 50.0% | |
| AGCCAAGAGGGCCAAAGAAT+TGG | + | chr3.4:2859338-2859357 | MS.gene51511:CDS | 50.0% | |
| AGGCCATATTTCACCCAACG+TGG | - | chr3.4:2861670-2861689 | None:intergenic | 50.0% | |
| AGGGAGATCATAAAGGTCGG+TGG | - | chr3.4:2862282-2862301 | None:intergenic | 50.0% | |
| CGCTGTGACTTATACTGTCG+AGG | - | chr3.4:2862363-2862382 | None:intergenic | 50.0% | |
| CTATCCCTTGGCGTGAGAAT+GGG | + | chr3.4:2861631-2861650 | MS.gene51511:intron | 50.0% | |
| CTTCCCACCAGGTAAGCAAA+AGG | - | chr3.4:2859899-2859918 | None:intergenic | 50.0% | |
| GCCATATTTCACCCAACGTG+GGG | - | chr3.4:2861668-2861687 | None:intergenic | 50.0% | |
| GCGTGCTTGGTTATGCCATT+TGG | - | chr3.4:2862789-2862808 | None:intergenic | 50.0% | |
| GGCCATATTTCACCCAACGT+GGG | - | chr3.4:2861669-2861688 | None:intergenic | 50.0% | |
| GGCTAGCAGGGAGATCATAA+AGG | - | chr3.4:2862289-2862308 | None:intergenic | 50.0% | |
| GTAGCCATGTCAGGACATGT+TGG | - | chr3.4:2863451-2863470 | None:intergenic | 50.0% | |
| GTGGTAATAGTCCCCACGTT+GGG | + | chr3.4:2861654-2861673 | MS.gene51511:intron | 50.0% | |
| TACGGCTTCCTTTCTCCAGA+AGG | + | chr3.4:2860464-2860483 | MS.gene51511:CDS | 50.0% | |
| TATCCCTTGGCGTGAGAATG+GGG | + | chr3.4:2861632-2861651 | MS.gene51511:intron | 50.0% | |
| TCCCCACGTTGGGTGAAATA+TGG | + | chr3.4:2861664-2861683 | MS.gene51511:intron | 50.0% | |
| TCGGATGCCTTGTATGGACT+TGG | + | chr3.4:2861509-2861528 | MS.gene51511:intron | 50.0% | |
| TCTATCCCTTGGCGTGAGAA+TGG | + | chr3.4:2861630-2861649 | MS.gene51511:intron | 50.0% | |
| ! | AAGTCCATACAAGGCATCCG+AGG | - | chr3.4:2861510-2861529 | None:intergenic | 50.0% |
| ! | CGCTCTAGATGTCTATCCCT+TGG | + | chr3.4:2861619-2861638 | MS.gene51511:intron | 50.0% |
| ! | GCTCTCGAGTCAACTCGTTT+TGG | - | chr3.4:2861468-2861487 | None:intergenic | 50.0% |
| ! | GGAGGTCAGAGGTGTAAACA+CGG | - | chr3.4:2861446-2861465 | None:intergenic | 50.0% |
| ! | GGATAGACATCTAGAGCGTG+AGG | - | chr3.4:2861617-2861636 | None:intergenic | 50.0% |
| ! | GTGCGGCATTTTAAGCCAAG+AGG | + | chr3.4:2859325-2859344 | MS.gene51511:CDS | 50.0% |
| ! | TAGACTTTAGGTGCCACACG+TGG | - | chr3.4:2863710-2863729 | None:intergenic | 50.0% |
| !! | GACAGCTCTAGTCTTATGGC+AGG | - | chr3.4:2860799-2860818 | None:intergenic | 50.0% |
| !! | TCGAGTCAACTCGTTTTGGG+AGG | - | chr3.4:2861464-2861483 | None:intergenic | 50.0% |
| !!! | AACTCGTTTTGGGAGGTCAG+AGG | - | chr3.4:2861457-2861476 | None:intergenic | 50.0% |
| !!! | TGGTGGGGGCTTTTTCAAGT+GGG | - | chr3.4:2860844-2860863 | None:intergenic | 50.0% |
| !!! | TTGGTGGGGGCTTTTTCAAG+TGG | - | chr3.4:2860845-2860864 | None:intergenic | 50.0% |
| AGGAAAAAGGGTCAGGAGCG+AGG | + | chr3.4:2859799-2859818 | MS.gene51511:CDS | 55.0% | |
| GGAAAAAGGGTCAGGAGCGA+GGG | + | chr3.4:2859800-2859819 | MS.gene51511:CDS | 55.0% | |
| GGTGGTAATAGTCCCCACGT+TGG | + | chr3.4:2861653-2861672 | MS.gene51511:intron | 55.0% | |
| TGCCACACGTGGATCATAGC+CGG | - | chr3.4:2863699-2863718 | None:intergenic | 55.0% | |
| ! | ACTGGCTCAAGCTCAGGTGA+TGG | + | chr3.4:2863814-2863833 | MS.gene51511:CDS | 55.0% |
| !! | CAGCCTCAGAAGTGCTTAGC+AGG | - | chr3.4:2860056-2860075 | None:intergenic | 55.0% |
| ACCACCCCATTCTCACGCCA+AGG | - | chr3.4:2861639-2861658 | None:intergenic | 60.0% | |
| AGCCCCCTTACTATGTGGGC+TGG | + | chr3.4:2861298-2861317 | MS.gene51511:intron | 60.0% | |
| CACACGTGGATCATAGCCGG+CGG | - | chr3.4:2863696-2863715 | None:intergenic | 60.0% | |
| CATCCCCTCAGCACTGTGTC+TGG | - | chr3.4:2860356-2860375 | None:intergenic | 60.0% | |
| CCACCCCATTCTCACGCCAA+GGG | - | chr3.4:2861638-2861657 | None:intergenic | 60.0% | |
| CCCCAGCCCACATAGTAAGG+GGG | - | chr3.4:2861303-2861322 | None:intergenic | 60.0% | |
| GCCCCAGCCCACATAGTAAG+GGG | - | chr3.4:2861304-2861323 | None:intergenic | 60.0% | |
| GCCCCCTTACTATGTGGGCT+GGG | + | chr3.4:2861299-2861318 | MS.gene51511:intron | 60.0% | |
| GGCCCCAGCCCACATAGTAA+GGG | - | chr3.4:2861305-2861324 | None:intergenic | 60.0% | |
| GGGCTGGGGCCAAAACTTCA+AGG | + | chr3.4:2861314-2861333 | MS.gene51511:intron | 60.0% | |
| TGGCCCCAGCCCACATAGTA+AGG | - | chr3.4:2861306-2861325 | None:intergenic | 60.0% | |
| TGTGGCCAGACACAGTGCTG+AGG | + | chr3.4:2860348-2860367 | MS.gene51511:CDS | 60.0% | |
| ! | CCCCCTTACTATGTGGGCTG+GGG | + | chr3.4:2861300-2861319 | MS.gene51511:intron | 60.0% |
| ! | GTGGCCAGACACAGTGCTGA+GGG | + | chr3.4:2860349-2860368 | MS.gene51511:CDS | 60.0% |
| ! | TGGCCAGACACAGTGCTGAG+GGG | + | chr3.4:2860350-2860369 | MS.gene51511:CDS | 60.0% |
| !! | GAGAGGGCATTACGCGTGCT+TGG | - | chr3.4:2862802-2862821 | None:intergenic | 60.0% |
| CCCTTGGCGTGAGAATGGGG+TGG | + | chr3.4:2861635-2861654 | MS.gene51511:intron | 65.0% | |
| ! | CGCCGGCTATGATCCACGTG+TGG | + | chr3.4:2863694-2863713 | MS.gene51511:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 2859070 | 2863898 | 2859070 | ID=MS.gene51511 |
| chr3.4 | mRNA | 2859070 | 2863898 | 2859070 | ID=MS.gene51511.t1;Parent=MS.gene51511 |
| chr3.4 | exon | 2859070 | 2859990 | 2859070 | ID=MS.gene51511.t1.exon1;Parent=MS.gene51511.t1 |
| chr3.4 | CDS | 2859070 | 2859990 | 2859070 | ID=cds.MS.gene51511.t1;Parent=MS.gene51511.t1 |
| chr3.4 | exon | 2860337 | 2860485 | 2860337 | ID=MS.gene51511.t1.exon2;Parent=MS.gene51511.t1 |
| chr3.4 | CDS | 2860337 | 2860485 | 2860337 | ID=cds.MS.gene51511.t1;Parent=MS.gene51511.t1 |
| chr3.4 | exon | 2863649 | 2863898 | 2863649 | ID=MS.gene51511.t1.exon3;Parent=MS.gene51511.t1 |
| chr3.4 | CDS | 2863649 | 2863898 | 2863649 | ID=cds.MS.gene51511.t1;Parent=MS.gene51511.t1 |
| Gene Sequence |
| Protein sequence |
