Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77015.t1 | XP_003605354.2 | 77.6 | 495 | 41 | 3 | 1 | 494 | 1 | 426 | 1.10E-197 | 699.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77015.t1 | P93030 | 44.0 | 100 | 36 | 2 | 128 | 214 | 15 | 107 | 2.7e-19 | 98.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77015.t1 | G7JJK5 | 77.6 | 495 | 41 | 3 | 1 | 494 | 1 | 426 | 8.0e-198 | 699.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene77015 | 0.81992 | 9.01E-53 | -1.69E-46 |
| MS.gene049159 | MS.gene77015 | 0.805714 | 1.17E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene77015 | 0.855123 | 7.79E-62 | -1.69E-46 |
| MS.gene049343 | MS.gene77015 | 0.853059 | 3.07E-61 | -1.69E-46 |
| MS.gene049435 | MS.gene77015 | 0.812272 | 4.61E-51 | -1.69E-46 |
| MS.gene049452 | MS.gene77015 | 0.801137 | 1.04E-48 | -1.69E-46 |
| MS.gene049850 | MS.gene77015 | 0.805337 | 1.40E-49 | -1.69E-46 |
| MS.gene050026 | MS.gene77015 | 0.83004 | 3.67E-55 | -1.69E-46 |
| MS.gene050156 | MS.gene77015 | 0.848704 | 5.17E-60 | -1.69E-46 |
| MS.gene050201 | MS.gene77015 | 0.802786 | 4.76E-49 | -1.69E-46 |
| MS.gene050273 | MS.gene77015 | 0.808591 | 2.87E-50 | -1.69E-46 |
| MS.gene050287 | MS.gene77015 | -0.812138 | 4.93E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene77015 | 0.803881 | 2.82E-49 | -1.69E-46 |
| MS.gene050559 | MS.gene77015 | 0.801884 | 7.29E-49 | -1.69E-46 |
| MS.gene050561 | MS.gene77015 | 0.813341 | 2.69E-51 | -1.69E-46 |
| MS.gene050719 | MS.gene77015 | 0.801389 | 9.22E-49 | -1.69E-46 |
| MS.gene050724 | MS.gene77015 | 0.806104 | 9.67E-50 | -1.69E-46 |
| MS.gene050750 | MS.gene77015 | 0.85235 | 4.89E-61 | -1.69E-46 |
| MS.gene050799 | MS.gene77015 | 0.817938 | 2.54E-52 | -1.69E-46 |
| MS.gene050826 | MS.gene77015 | 0.818327 | 2.08E-52 | -1.69E-46 |
| MS.gene050844 | MS.gene77015 | 0.827583 | 1.44E-54 | -1.69E-46 |
| MS.gene050905 | MS.gene77015 | -0.80509 | 1.58E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene77015 | 0.856302 | 3.53E-62 | -1.69E-46 |
| MS.gene051181 | MS.gene77015 | 0.842072 | 3.23E-58 | -1.69E-46 |
| MS.gene051247 | MS.gene77015 | 0.834814 | 2.41E-56 | -1.69E-46 |
| MS.gene051265 | MS.gene77015 | 0.802861 | 4.59E-49 | -1.69E-46 |
| MS.gene051332 | MS.gene77015 | 0.827589 | 1.44E-54 | -1.69E-46 |
| MS.gene051594 | MS.gene77015 | 0.825583 | 4.33E-54 | -1.69E-46 |
| MS.gene051719 | MS.gene77015 | 0.804182 | 2.44E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene77015 | 0.839858 | 1.23E-57 | -1.69E-46 |
| MS.gene051924 | MS.gene77015 | -0.806021 | 1.01E-49 | -1.69E-46 |
| MS.gene051926 | MS.gene77015 | -0.814379 | 1.59E-51 | -1.69E-46 |
| MS.gene052037 | MS.gene77015 | 0.804492 | 2.10E-49 | -1.69E-46 |
| MS.gene052042 | MS.gene77015 | 0.808186 | 3.50E-50 | -1.69E-46 |
| MS.gene052056 | MS.gene77015 | -0.8049 | 1.73E-49 | -1.69E-46 |
| MS.gene052108 | MS.gene77015 | 0.816692 | 4.85E-52 | -1.69E-46 |
| MS.gene052190 | MS.gene77015 | 0.84282 | 2.05E-58 | -1.69E-46 |
| MS.gene052208 | MS.gene77015 | 0.824477 | 7.90E-54 | -1.69E-46 |
| MS.gene052333 | MS.gene77015 | 0.830258 | 3.25E-55 | -1.69E-46 |
| MS.gene052389 | MS.gene77015 | 0.809093 | 2.24E-50 | -1.69E-46 |
| MS.gene052447 | MS.gene77015 | 0.807061 | 6.08E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene77015 | 0.862105 | 6.41E-64 | -1.69E-46 |
| MS.gene052534 | MS.gene77015 | 0.806686 | 7.29E-50 | -1.69E-46 |
| MS.gene052582 | MS.gene77015 | 0.822767 | 1.99E-53 | -1.69E-46 |
| MS.gene052584 | MS.gene77015 | 0.832764 | 7.85E-56 | -1.69E-46 |
| MS.gene052586 | MS.gene77015 | 0.813252 | 2.81E-51 | -1.69E-46 |
| MS.gene052773 | MS.gene77015 | 0.844161 | 8.97E-59 | -1.69E-46 |
| MS.gene052863 | MS.gene77015 | 0.853286 | 2.64E-61 | -1.69E-46 |
| MS.gene053006 | MS.gene77015 | 0.805869 | 1.08E-49 | -1.69E-46 |
| MS.gene053008 | MS.gene77015 | 0.811345 | 7.34E-51 | -1.69E-46 |
| MS.gene053054 | MS.gene77015 | -0.808445 | 3.09E-50 | -1.69E-46 |
| MS.gene053145 | MS.gene77015 | 0.82902 | 6.50E-55 | -1.69E-46 |
| MS.gene053146 | MS.gene77015 | 0.800814 | 1.21E-48 | -1.69E-46 |
| MS.gene053166 | MS.gene77015 | 0.830167 | 3.42E-55 | -1.69E-46 |
| MS.gene053201 | MS.gene77015 | 0.804958 | 1.68E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene77015 | 0.850249 | 1.92E-60 | -1.69E-46 |
| MS.gene053883 | MS.gene77015 | 0.816566 | 5.18E-52 | -1.69E-46 |
| MS.gene053998 | MS.gene77015 | 0.810481 | 1.13E-50 | -1.69E-46 |
| MS.gene05414 | MS.gene77015 | 0.831678 | 1.46E-55 | -1.69E-46 |
| MS.gene05415 | MS.gene77015 | 0.870367 | 1.54E-66 | -1.69E-46 |
| MS.gene05423 | MS.gene77015 | 0.810034 | 1.41E-50 | -1.69E-46 |
| MS.gene054291 | MS.gene77015 | -0.842938 | 1.90E-58 | -1.69E-46 |
| MS.gene054405 | MS.gene77015 | 0.850256 | 1.91E-60 | -1.69E-46 |
| MS.gene054467 | MS.gene77015 | 0.83209 | 1.15E-55 | -1.69E-46 |
| MS.gene054468 | MS.gene77015 | 0.824842 | 6.48E-54 | -1.69E-46 |
| MS.gene054472 | MS.gene77015 | 0.832914 | 7.20E-56 | -1.69E-46 |
| MS.gene054479 | MS.gene77015 | 0.819272 | 1.27E-52 | -1.69E-46 |
| MS.gene054559 | MS.gene77015 | 0.830911 | 2.25E-55 | -1.69E-46 |
| MS.gene054576 | MS.gene77015 | 0.805529 | 1.28E-49 | -1.69E-46 |
| MS.gene054582 | MS.gene77015 | 0.806103 | 9.68E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene77015 | 0.843043 | 1.79E-58 | -1.69E-46 |
| MS.gene054657 | MS.gene77015 | 0.802956 | 4.39E-49 | -1.69E-46 |
| MS.gene054775 | MS.gene77015 | 0.823807 | 1.14E-53 | -1.69E-46 |
| MS.gene054991 | MS.gene77015 | 0.81954 | 1.10E-52 | -1.69E-46 |
| MS.gene055227 | MS.gene77015 | 0.839547 | 1.48E-57 | -1.69E-46 |
| MS.gene055228 | MS.gene77015 | 0.828156 | 1.05E-54 | -1.69E-46 |
| MS.gene055586 | MS.gene77015 | 0.807233 | 5.59E-50 | -1.69E-46 |
| MS.gene055589 | MS.gene77015 | 0.81095 | 8.93E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene77015 | 0.810484 | 1.13E-50 | -1.69E-46 |
| MS.gene055778 | MS.gene77015 | 0.820665 | 6.08E-53 | -1.69E-46 |
| MS.gene055818 | MS.gene77015 | 0.901373 | 2.86E-78 | -1.69E-46 |
| MS.gene055926 | MS.gene77015 | 0.812766 | 3.59E-51 | -1.69E-46 |
| MS.gene05604 | MS.gene77015 | 0.829868 | 4.05E-55 | -1.69E-46 |
| MS.gene056050 | MS.gene77015 | 0.852504 | 4.42E-61 | -1.69E-46 |
| MS.gene056173 | MS.gene77015 | 0.838554 | 2.68E-57 | -1.69E-46 |
| MS.gene056174 | MS.gene77015 | 0.848709 | 5.16E-60 | -1.69E-46 |
| MS.gene056252 | MS.gene77015 | 0.802807 | 4.71E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene77015 | 0.813035 | 3.14E-51 | -1.69E-46 |
| MS.gene056366 | MS.gene77015 | 0.85362 | 2.12E-61 | -1.69E-46 |
| MS.gene056373 | MS.gene77015 | 0.854094 | 1.55E-61 | -1.69E-46 |
| MS.gene056498 | MS.gene77015 | 0.831439 | 1.67E-55 | -1.69E-46 |
| MS.gene056506 | MS.gene77015 | 0.836826 | 7.45E-57 | -1.69E-46 |
| MS.gene056595 | MS.gene77015 | 0.834545 | 2.82E-56 | -1.69E-46 |
| MS.gene056776 | MS.gene77015 | 0.807237 | 5.58E-50 | -1.69E-46 |
| MS.gene056779 | MS.gene77015 | 0.815288 | 9.98E-52 | -1.69E-46 |
| MS.gene05690 | MS.gene77015 | 0.817579 | 3.07E-52 | -1.69E-46 |
| MS.gene057012 | MS.gene77015 | 0.801384 | 9.23E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene77015 | 0.854228 | 1.42E-61 | -1.69E-46 |
| MS.gene057208 | MS.gene77015 | 0.84334 | 1.49E-58 | -1.69E-46 |
| MS.gene057314 | MS.gene77015 | 0.815836 | 7.54E-52 | -1.69E-46 |
| MS.gene057414 | MS.gene77015 | 0.8095 | 1.83E-50 | -1.69E-46 |
| MS.gene057444 | MS.gene77015 | 0.853211 | 2.78E-61 | -1.69E-46 |
| MS.gene057598 | MS.gene77015 | 0.859904 | 2.99E-63 | -1.69E-46 |
| MS.gene057855 | MS.gene77015 | 0.865285 | 6.60E-65 | -1.69E-46 |
| MS.gene057915 | MS.gene77015 | 0.828451 | 8.93E-55 | -1.69E-46 |
| MS.gene058008 | MS.gene77015 | 0.818588 | 1.81E-52 | -1.69E-46 |
| MS.gene058009 | MS.gene77015 | 0.826146 | 3.18E-54 | -1.69E-46 |
| MS.gene058010 | MS.gene77015 | 0.809157 | 2.17E-50 | -1.69E-46 |
| MS.gene058037 | MS.gene77015 | 0.818696 | 1.71E-52 | -1.69E-46 |
| MS.gene058294 | MS.gene77015 | 0.835272 | 1.85E-56 | -1.69E-46 |
| MS.gene058498 | MS.gene77015 | 0.806981 | 6.32E-50 | -1.69E-46 |
| MS.gene058502 | MS.gene77015 | 0.821012 | 5.06E-53 | -1.69E-46 |
| MS.gene058625 | MS.gene77015 | 0.849749 | 2.65E-60 | -1.69E-46 |
| MS.gene058636 | MS.gene77015 | 0.802386 | 5.75E-49 | -1.69E-46 |
| MS.gene058783 | MS.gene77015 | 0.821841 | 3.26E-53 | -1.69E-46 |
| MS.gene058829 | MS.gene77015 | 0.81308 | 3.07E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene77015 | 0.866689 | 2.37E-65 | -1.69E-46 |
| MS.gene059128 | MS.gene77015 | 0.800604 | 1.33E-48 | -1.69E-46 |
| MS.gene059272 | MS.gene77015 | 0.822485 | 2.31E-53 | -1.69E-46 |
| MS.gene059382 | MS.gene77015 | 0.800469 | 1.42E-48 | -1.69E-46 |
| MS.gene059439 | MS.gene77015 | 0.844048 | 9.62E-59 | -1.69E-46 |
| MS.gene059459 | MS.gene77015 | 0.805611 | 1.23E-49 | -1.69E-46 |
| MS.gene059584 | MS.gene77015 | 0.815463 | 9.13E-52 | -1.69E-46 |
| MS.gene059625 | MS.gene77015 | 0.805316 | 1.42E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene77015 | 0.806305 | 8.78E-50 | -1.69E-46 |
| MS.gene059952 | MS.gene77015 | 0.801095 | 1.06E-48 | -1.69E-46 |
| MS.gene060011 | MS.gene77015 | 0.820841 | 5.54E-53 | -1.69E-46 |
| MS.gene060167 | MS.gene77015 | 0.80278 | 4.77E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene77015 | 0.843832 | 1.10E-58 | -1.69E-46 |
| MS.gene060365 | MS.gene77015 | 0.800266 | 1.56E-48 | -1.69E-46 |
| MS.gene060373 | MS.gene77015 | 0.816292 | 5.96E-52 | -1.69E-46 |
| MS.gene060521 | MS.gene77015 | 0.826565 | 2.53E-54 | -1.69E-46 |
| MS.gene060572 | MS.gene77015 | 0.842965 | 1.87E-58 | -1.69E-46 |
| MS.gene060634 | MS.gene77015 | -0.834941 | 2.24E-56 | -1.69E-46 |
| MS.gene060683 | MS.gene77015 | 0.800775 | 1.23E-48 | -1.69E-46 |
| MS.gene060685 | MS.gene77015 | 0.812484 | 4.14E-51 | -1.69E-46 |
| MS.gene060777 | MS.gene77015 | 0.851788 | 7.06E-61 | -1.69E-46 |
| MS.gene060803 | MS.gene77015 | 0.809472 | 1.86E-50 | -1.69E-46 |
| MS.gene060879 | MS.gene77015 | 0.819705 | 1.01E-52 | -1.69E-46 |
| MS.gene060935 | MS.gene77015 | 0.804535 | 2.06E-49 | -1.69E-46 |
| MS.gene061040 | MS.gene77015 | -0.801069 | 1.07E-48 | -1.69E-46 |
| MS.gene061091 | MS.gene77015 | 0.815607 | 8.48E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77015.t1 | MTR_4g029440 | 94.015 | 401 | 20 | 2 | 1 | 398 | 1 | 400 | 0.0 | 743 |
| MS.gene77015.t1 | MTR_4g029440 | 93.909 | 394 | 20 | 2 | 8 | 398 | 2 | 394 | 0.0 | 728 |
| MS.gene77015.t1 | MTR_2g061230 | 43.678 | 261 | 117 | 7 | 1 | 260 | 1 | 232 | 2.13e-54 | 182 |
| MS.gene77015.t1 | MTR_7g093390 | 34.699 | 366 | 179 | 12 | 55 | 380 | 93 | 438 | 2.47e-47 | 170 |
| MS.gene77015.t1 | MTR_1g054280 | 56.044 | 91 | 38 | 2 | 127 | 216 | 71 | 160 | 3.26e-29 | 116 |
| MS.gene77015.t1 | MTR_1g054260 | 48.000 | 125 | 43 | 5 | 125 | 232 | 77 | 196 | 5.56e-29 | 114 |
| MS.gene77015.t1 | MTR_1g054465 | 45.926 | 135 | 48 | 7 | 125 | 239 | 45 | 174 | 7.80e-28 | 110 |
| MS.gene77015.t1 | MTR_1g054210 | 52.427 | 103 | 45 | 3 | 117 | 218 | 109 | 208 | 8.13e-28 | 111 |
| MS.gene77015.t1 | MTR_2g090330 | 46.667 | 90 | 44 | 1 | 130 | 215 | 28 | 117 | 1.79e-26 | 105 |
| MS.gene77015.t1 | MTR_2g090330 | 46.667 | 90 | 44 | 1 | 130 | 215 | 31 | 120 | 1.17e-24 | 100 |
| MS.gene77015.t1 | MTR_2g090325 | 47.727 | 88 | 38 | 2 | 127 | 214 | 15 | 94 | 3.88e-23 | 97.4 |
| MS.gene77015.t1 | MTR_5g019300 | 45.977 | 87 | 46 | 1 | 132 | 218 | 35 | 120 | 1.35e-22 | 97.1 |
| MS.gene77015.t1 | MTR_1g021895 | 45.055 | 91 | 48 | 2 | 128 | 218 | 27 | 115 | 1.67e-22 | 96.7 |
| MS.gene77015.t1 | MTR_8g465910 | 46.392 | 97 | 42 | 3 | 127 | 215 | 41 | 135 | 2.69e-21 | 93.2 |
| MS.gene77015.t1 | MTR_2g090295 | 40.171 | 117 | 56 | 3 | 105 | 214 | 20 | 129 | 9.08e-21 | 92.0 |
| MS.gene77015.t1 | MTR_2g013550 | 39.091 | 110 | 50 | 3 | 116 | 213 | 11 | 115 | 2.32e-20 | 90.5 |
| MS.gene77015.t1 | MTR_4g088870 | 39.423 | 104 | 54 | 2 | 125 | 219 | 25 | 128 | 3.56e-20 | 89.0 |
| MS.gene77015.t1 | MTR_4g088875 | 36.449 | 107 | 58 | 2 | 123 | 219 | 22 | 128 | 3.42e-19 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77015.t1 | AT2G44410 | 43.462 | 260 | 104 | 8 | 1 | 245 | 10 | 241 | 3.35e-53 | 185 |
| MS.gene77015.t1 | AT3G58030 | 50.365 | 137 | 57 | 6 | 113 | 244 | 114 | 244 | 8.31e-35 | 135 |
| MS.gene77015.t1 | AT3G58030 | 50.365 | 137 | 57 | 6 | 113 | 244 | 114 | 244 | 8.31e-35 | 135 |
| MS.gene77015.t1 | AT3G58030 | 50.365 | 137 | 57 | 6 | 113 | 244 | 114 | 244 | 8.31e-35 | 135 |
| MS.gene77015.t1 | AT3G58030 | 50.365 | 137 | 57 | 6 | 113 | 244 | 114 | 244 | 8.31e-35 | 135 |
| MS.gene77015.t1 | AT1G74990 | 44.860 | 107 | 58 | 1 | 125 | 231 | 10 | 115 | 5.61e-29 | 111 |
| MS.gene77015.t1 | AT2G42030 | 30.225 | 311 | 174 | 9 | 93 | 373 | 100 | 397 | 1.12e-28 | 118 |
| MS.gene77015.t1 | AT1G19310 | 48.276 | 87 | 44 | 1 | 132 | 218 | 21 | 106 | 1.10e-23 | 99.8 |
| MS.gene77015.t1 | AT4G28270 | 46.000 | 100 | 34 | 3 | 128 | 214 | 15 | 107 | 1.23e-22 | 95.9 |
| MS.gene77015.t1 | AT2G23780 | 45.977 | 87 | 46 | 1 | 132 | 218 | 26 | 111 | 1.91e-22 | 96.3 |
| MS.gene77015.t1 | AT2G23780 | 45.977 | 87 | 46 | 1 | 132 | 218 | 26 | 111 | 1.91e-22 | 96.3 |
| MS.gene77015.t1 | AT2G23780 | 45.977 | 87 | 46 | 1 | 132 | 218 | 26 | 111 | 1.91e-22 | 96.3 |
| MS.gene77015.t1 | AT4G27470 | 35.200 | 125 | 64 | 3 | 132 | 243 | 42 | 162 | 5.27e-19 | 86.7 |
| MS.gene77015.t1 | AT4G03510 | 43.956 | 91 | 38 | 4 | 132 | 214 | 46 | 131 | 2.79e-18 | 84.7 |
| MS.gene77015.t1 | AT4G03510 | 43.956 | 91 | 38 | 4 | 132 | 214 | 46 | 131 | 2.79e-18 | 84.7 |
| MS.gene77015.t1 | AT4G03510 | 43.956 | 91 | 38 | 4 | 132 | 214 | 46 | 131 | 2.79e-18 | 84.7 |
| MS.gene77015.t1 | AT4G03510 | 43.956 | 91 | 38 | 4 | 132 | 214 | 46 | 131 | 2.79e-18 | 84.7 |
Find 115 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGGGTATTATTCCAATTTA+TGG | 0.104536 | 4.3:+70318058 | MS.gene77015:CDS |
| CCATTTCCATGTCCATAAAT+TGG | 0.194274 | 4.3:-70318070 | None:intergenic |
| TTATCAACATTCCTACTTAA+AGG | 0.205288 | 4.3:-70318637 | None:intergenic |
| CTCTCAGGTGTGGTACTATT+AGG | 0.243365 | 4.3:-70318283 | None:intergenic |
| GTCGATAATGTTGCTGTTAT+AGG | 0.252556 | 4.3:+70320155 | MS.gene77015:CDS |
| CATAACCGAATTGGTGGATT+TGG | 0.278139 | 4.3:+70318238 | MS.gene77015:CDS |
| CTTCTGTGTCTCTGTTAAAT+AGG | 0.287511 | 4.3:+70320129 | MS.gene77015:CDS |
| TCTCAGGTGTGGTACTATTA+GGG | 0.289538 | 4.3:-70318282 | None:intergenic |
| GTTGATAATGTTGCTGTTGC+AGG | 0.300831 | 4.3:+70318652 | MS.gene77015:CDS |
| CTTCTATTGTCCAAAGTATT+CGG | 0.320027 | 4.3:+70318209 | MS.gene77015:CDS |
| CTTTGATTGTAATATTTGTT+TGG | 0.349272 | 4.3:+70317910 | MS.gene77015:CDS |
| TGATTTGAATCAGGAGCCTT+TGG | 0.350787 | 4.3:+70317526 | MS.gene77015:CDS |
| TATGAAACCGCCGAATACTT+TGG | 0.373232 | 4.3:-70318219 | None:intergenic |
| TTCGAGAGCGAGGCAGCGTC+GGG | 0.374026 | 4.3:+70317655 | MS.gene77015:CDS |
| ATTCAGATAACCAATGTTAC+AGG | 0.375175 | 4.3:+70317701 | MS.gene77015:CDS |
| TTCTGCTGAAAGATTAGTTC+AGG | 0.376998 | 4.3:+70318444 | MS.gene77015:CDS |
| CGGCGGTTTCATAACCGAAT+TGG | 0.383576 | 4.3:+70318229 | MS.gene77015:CDS |
| CCAATTTATGGACATGGAAA+TGG | 0.384021 | 4.3:+70318070 | MS.gene77015:CDS |
| ACATTCCTTTGCTTTCGAAT+AGG | 0.388726 | 4.3:-70318008 | None:intergenic |
| TATGGAGCTTGATTTGAATC+AGG | 0.400185 | 4.3:+70317517 | None:intergenic |
| CTCTCGAAGTAATTGCTTCA+AGG | 0.402049 | 4.3:-70317640 | None:intergenic |
| GGAGCGGAACGATGCTGATC+AGG | 0.409682 | 4.3:+70317769 | MS.gene77015:CDS |
| GACCATTGATATATGATTCA+AGG | 0.415979 | 4.3:-70318468 | None:intergenic |
| TGAACATGGTGGTTCTCAAC+AGG | 0.416867 | 4.3:+70318351 | MS.gene77015:CDS |
| TGCAGTTTCTCCTGTAACAT+TGG | 0.419434 | 4.3:-70317711 | None:intergenic |
| CTTCTTCTACCGTTTGATGA+AGG | 0.424965 | 4.3:-70320227 | None:intergenic |
| GTGGTTCTCAACAGGTTTCA+AGG | 0.428291 | 4.3:+70318359 | MS.gene77015:CDS |
| CTTCTCTTTCTCCTTTAAGT+AGG | 0.429766 | 4.3:+70318626 | MS.gene77015:CDS |
| ATCTGAATCCGAGAGGAGTT+CGG | 0.434023 | 4.3:-70317686 | None:intergenic |
| GTTACCTCCCCTTTACAAAC+AGG | 0.438464 | 4.3:-70318031 | None:intergenic |
| AGTTGCTGCAGCTACAGAAT+TGG | 0.441906 | 4.3:-70318605 | None:intergenic |
| TTGCTTCAAGGTGTGTGATT+CGG | 0.441946 | 4.3:-70317628 | None:intergenic |
| GTCTGCGTGCGAGACTGAAC+AGG | 0.444476 | 4.3:-70318319 | None:intergenic |
| GGGATGGAAGAGATTGATAA+TGG | 0.448635 | 4.3:+70317860 | MS.gene77015:CDS |
| AGGAATGTCCTGTTTGTAAA+GGG | 0.451056 | 4.3:+70318023 | MS.gene77015:CDS |
| AAATGAACGCACTGATGTAC+TGG | 0.451580 | 4.3:-70317558 | None:intergenic |
| AGTCATTTCGATATTCTTGT+TGG | 0.454214 | 4.3:-70320281 | None:intergenic |
| TGACCACAACATGTCAAAAC+AGG | 0.454953 | 4.3:-70317947 | None:intergenic |
| TATATCAATGGTCACAATAC+AGG | 0.455204 | 4.3:+70318478 | MS.gene77015:CDS |
| TAGAAGAAGAAGATGCTCCT+TGG | 0.455800 | 4.3:-70318192 | None:intergenic |
| TAAAGGGGAGGTAACTGAAT+CGG | 0.458742 | 4.3:+70318039 | MS.gene77015:CDS |
| GGCAAACCATTGTTTCTCTC+AGG | 0.458959 | 4.3:-70318298 | None:intergenic |
| TTCTTCTACCGTTTGATGAA+GGG | 0.463767 | 4.3:-70320226 | None:intergenic |
| CTCTCAACTCTAGGTGCCTT+AGG | 0.467180 | 4.3:-70318148 | None:intergenic |
| TATGTTGGAAGAACTTGAAT+CGG | 0.467329 | 4.3:+70317586 | MS.gene77015:CDS |
| AGAAGAAGAAGATGCTCCTT+GGG | 0.474601 | 4.3:-70318191 | None:intergenic |
| GGTAAAGTGGAGGAGAGTAG+TGG | 0.474653 | 4.3:+70317881 | MS.gene77015:CDS |
| CGGTTTCATAACCGAATTGG+TGG | 0.476371 | 4.3:+70318232 | MS.gene77015:CDS |
| GCTCTCCAAATCCACCAATT+CGG | 0.478712 | 4.3:-70318243 | None:intergenic |
| AACGATGCTGATCAGGATGA+AGG | 0.485394 | 4.3:+70317776 | MS.gene77015:CDS |
| TCAAACGGTAGAAGAAGAAA+TGG | 0.486110 | 4.3:+70320233 | MS.gene77015:CDS |
| GGTTGCCGCCGAACTCCTCT+CGG | 0.492462 | 4.3:+70317678 | MS.gene77015:CDS |
| CTTGACCACGACTCTCTGAC+TGG | 0.492720 | 4.3:-70318567 | None:intergenic |
| AGAGATTGATAATGGTAAAG+TGG | 0.493881 | 4.3:+70317868 | MS.gene77015:CDS |
| CATTTGATAGCAAAAGCTCT+AGG | 0.498838 | 4.3:+70317839 | MS.gene77015:CDS |
| GAGAGTTCCTCCTCGACCTA+AGG | 0.502667 | 4.3:+70318132 | MS.gene77015:CDS |
| AAGGAATGTCCTGTTTGTAA+AGG | 0.503450 | 4.3:+70318022 | MS.gene77015:CDS |
| AACAGCATTAAATTCTGCAA+TGG | 0.508273 | 4.3:+70318420 | MS.gene77015:CDS |
| CTTCGAGAGCGAGGCAGCGT+CGG | 0.509799 | 4.3:+70317654 | MS.gene77015:CDS |
| GAAGAAGAAGATTGCGATGA+CGG | 0.511269 | 4.3:+70318788 | MS.gene77015:CDS |
| CTGTTAGACCCTTCATCAAA+CGG | 0.512392 | 4.3:+70320218 | MS.gene77015:CDS |
| GACCTTGAATCATATATCAA+TGG | 0.517570 | 4.3:+70318466 | MS.gene77015:CDS |
| AAAGGGGAGGTAACTGAATC+GGG | 0.517863 | 4.3:+70318040 | MS.gene77015:CDS |
| GCGAAGAACGGAGGGAGGAG+CGG | 0.521333 | 4.3:+70317753 | MS.gene77015:CDS |
| ATTATTCCAATTTATGGACA+TGG | 0.526065 | 4.3:+70318064 | MS.gene77015:CDS |
| GTAAAGTGGAGGAGAGTAGT+GGG | 0.535109 | 4.3:+70317882 | MS.gene77015:CDS |
| TACAACTGATAGAAATGTAC+AGG | 0.535539 | 4.3:+70318687 | MS.gene77015:CDS |
| GCAACAGCAGGTGATGTTCA+AGG | 0.537071 | 4.3:+70317731 | MS.gene77015:CDS |
| TCGAGGAGGAACTCTCAAAC+CGG | 0.538001 | 4.3:-70318125 | None:intergenic |
| GGGATAGTTGAAAGTGTGAA+AGG | 0.543494 | 4.3:+70317797 | MS.gene77015:CDS |
| ACTCTAGGTGCCTTAGGTCG+AGG | 0.546117 | 4.3:-70318142 | None:intergenic |
| CTGATGGAAATGAAAGAAGC+CGG | 0.547924 | 4.3:+70318106 | MS.gene77015:CDS |
| GTTGAATTTCTAGTAACAGT+AGG | 0.548372 | 4.3:-70318523 | None:intergenic |
| GAATTTCTAGTAACAGTAGG+AGG | 0.555492 | 4.3:-70318520 | None:intergenic |
| TGTCTAATACTCTCAACTCT+AGG | 0.555708 | 4.3:-70318157 | None:intergenic |
| GGATAGTTGAAAGTGTGAAA+GGG | 0.557671 | 4.3:+70317798 | MS.gene77015:CDS |
| GTTTCAAGGTTGCTAGAGCA+AGG | 0.560862 | 4.3:+70318373 | MS.gene77015:CDS |
| GATAGTTGAAAGTGTGAAAG+GGG | 0.566431 | 4.3:+70317799 | MS.gene77015:CDS |
| GCGTTCATTTGATTCTATGT+TGG | 0.571256 | 4.3:+70317571 | MS.gene77015:CDS |
| ACAGGAGAAACTGCAACAGC+AGG | 0.572374 | 4.3:+70317719 | MS.gene77015:CDS |
| GTGATGTTCAAGGCGAAGAA+CGG | 0.575661 | 4.3:+70317741 | MS.gene77015:CDS |
| CGAGAGCGAGGCAGCGTCGG+GGG | 0.578008 | 4.3:+70317657 | MS.gene77015:CDS |
| TGGCGGCGGTGATTGTCTGA+TGG | 0.578360 | 4.3:+70318090 | MS.gene77015:CDS |
| TAGTTGAAAGTGTGAAAGGG+GGG | 0.581279 | 4.3:+70317801 | MS.gene77015:CDS |
| ATTTGATAGCAAAAGCTCTA+GGG | 0.584132 | 4.3:+70317840 | MS.gene77015:CDS |
| GATTGATAATGGTAAAGTGG+AGG | 0.594410 | 4.3:+70317871 | MS.gene77015:CDS |
| ACCATTGTTTCTCTCAGGTG+TGG | 0.595758 | 4.3:-70318293 | None:intergenic |
| ACGATGCTGATCAGGATGAA+GGG | 0.597581 | 4.3:+70317777 | MS.gene77015:CDS |
| TATGGACATGGAAATGGCGG+CGG | 0.603447 | 4.3:+70318076 | MS.gene77015:CDS |
| CAGACAGACAACAATGAACA+TGG | 0.607844 | 4.3:+70318337 | MS.gene77015:CDS |
| GATAGCAAAAGCTCTAGGGA+TGG | 0.616270 | 4.3:+70317844 | MS.gene77015:CDS |
| ATGTTCAAGGCGAAGAACGG+AGG | 0.619140 | 4.3:+70317744 | MS.gene77015:CDS |
| TCTTCATCTAGAGGTAGAAG+AGG | 0.623511 | 4.3:+70318727 | MS.gene77015:intron |
| AGACAGAAGTTGCTAACCCA+AGG | 0.623915 | 4.3:+70318175 | MS.gene77015:CDS |
| TCGAGAGCGAGGCAGCGTCG+GGG | 0.626763 | 4.3:+70317656 | MS.gene77015:CDS |
| TGTTCAAGGCGAAGAACGGA+GGG | 0.630328 | 4.3:+70317745 | MS.gene77015:CDS |
| ATAGTTGAAAGTGTGAAAGG+GGG | 0.631256 | 4.3:+70317800 | MS.gene77015:CDS |
| AAGCAATTACTTCGAGAGCG+AGG | 0.636181 | 4.3:+70317645 | MS.gene77015:CDS |
| TGCAGCTGTAGAATCAGTCA+CGG | 0.640246 | 4.3:-70320102 | None:intergenic |
| ACCACACCTGAGAGAAACAA+TGG | 0.640564 | 4.3:+70318292 | MS.gene77015:CDS |
| ATCAATGGTCACAATACAGG+AGG | 0.640899 | 4.3:+70318481 | MS.gene77015:CDS |
| ATGTCCTGTTTGTAAAGGGG+AGG | 0.641102 | 4.3:+70318027 | MS.gene77015:CDS |
| GTATGCCTATTCGAAAGCAA+AGG | 0.642527 | 4.3:+70318003 | MS.gene77015:CDS |
| ATTTATGGACATGGAAATGG+CGG | 0.647005 | 4.3:+70318073 | MS.gene77015:CDS |
| GGAATGTCCTGTTTGTAAAG+GGG | 0.658869 | 4.3:+70318024 | MS.gene77015:CDS |
| CTATTGTCCAAAGTATTCGG+CGG | 0.665724 | 4.3:+70318212 | MS.gene77015:CDS |
| GTACTGGTTTGATGATCCAA+AGG | 0.668438 | 4.3:-70317542 | None:intergenic |
| TCAAGGCGAAGAACGGAGGG+AGG | 0.671112 | 4.3:+70317748 | MS.gene77015:CDS |
| AGGCTCAGAAATTCAGACAA+CGG | 0.673554 | 4.3:+70320175 | MS.gene77015:CDS |
| CTAGGTGCCTTAGGTCGAGG+AGG | 0.679868 | 4.3:-70318139 | None:intergenic |
| TACGATAACTGATAGAAACA+CGG | 0.689120 | 4.3:-70317983 | None:intergenic |
| ACAAACCAGTCAGAGAGTCG+TGG | 0.695607 | 4.3:+70318562 | MS.gene77015:CDS |
| TGAATCCGAGAGGAGTTCGG+CGG | 0.720440 | 4.3:-70317683 | None:intergenic |
| ATTGGTTATCTGAATCCGAG+AGG | 0.732391 | 4.3:-70317693 | None:intergenic |
| ACAGACAACAATGAACATGG+TGG | 0.773237 | 4.3:+70318340 | MS.gene77015:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGAAAATTAATTTAAAATGA+AGG | + | chr4.3:70319907-70319926 | MS.gene77015:intron | 10.0% |
| !! | AACATATTTGATATTTGTCT+TGG | - | chr4.3:70318913-70318932 | None:intergenic | 20.0% |
| !! | ATCTAATAAAGAACATGTAA+AGG | - | chr4.3:70319330-70319349 | None:intergenic | 20.0% |
| !! | CTTTGATTGTAATATTTGTT+TGG | + | chr4.3:70317910-70317929 | MS.gene77015:CDS | 20.0% |
| !! | TCTAATAAAGAACATGTAAA+GGG | - | chr4.3:70319329-70319348 | None:intergenic | 20.0% |
| !! | TTAAACTGTTTATCCAAATA+GGG | + | chr4.3:70319219-70319238 | MS.gene77015:intron | 20.0% |
| !!! | AGTTTGTTGTATATATCATA+TGG | - | chr4.3:70319620-70319639 | None:intergenic | 20.0% |
| !!! | AGTTTTATTCAATAGATGTA+AGG | + | chr4.3:70318960-70318979 | MS.gene77015:intron | 20.0% |
| !!! | TATCATGATTGTTTCTTATA+AGG | + | chr4.3:70319562-70319581 | MS.gene77015:intron | 20.0% |
| !!! | TCTTTTGAATATCTAGTTTT+TGG | + | chr4.3:70319359-70319378 | MS.gene77015:intron | 20.0% |
| ! | ACTCTAATGTTAAGCTAATT+AGG | - | chr4.3:70319720-70319739 | None:intergenic | 25.0% |
| ! | ATTATTCCAATTTATGGACA+TGG | + | chr4.3:70318064-70318083 | MS.gene77015:CDS | 25.0% |
| ! | CAAAAAAAGATAGAGACTTA+TGG | + | chr4.3:70320022-70320041 | MS.gene77015:intron | 25.0% |
| ! | GTTAAACTGTTTATCCAAAT+AGG | + | chr4.3:70319218-70319237 | MS.gene77015:intron | 25.0% |
| ! | GTTCTTTATTAGATCTATCT+TGG | + | chr4.3:70319336-70319355 | MS.gene77015:intron | 25.0% |
| ! | TTATCAACATTCCTACTTAA+AGG | - | chr4.3:70318640-70318659 | None:intergenic | 25.0% |
| !! | ACTTAAGTTTTCTGTCTTTA+TGG | - | chr4.3:70319883-70319902 | None:intergenic | 25.0% |
| !! | ACTTATTTGAGATTATCTAC+TGG | + | chr4.3:70319003-70319022 | MS.gene77015:intron | 25.0% |
| !! | CATAAACTATAGAGTATTAG+AGG | - | chr4.3:70319488-70319507 | None:intergenic | 25.0% |
| !!! | TATCTAGTTTTTGGATCTTT+TGG | + | chr4.3:70319368-70319387 | MS.gene77015:intron | 25.0% |
| AACAGCATTAAATTCTGCAA+TGG | + | chr4.3:70318420-70318439 | MS.gene77015:CDS | 30.0% | |
| ATTCAGATAACCAATGTTAC+AGG | + | chr4.3:70317701-70317720 | MS.gene77015:CDS | 30.0% | |
| CATACTGTAACAAACATAAG+AGG | - | chr4.3:70319263-70319282 | None:intergenic | 30.0% | |
| CATGCAACATGTTGTATTAT+CGG | + | chr4.3:70319530-70319549 | MS.gene77015:intron | 30.0% | |
| GACCATTGATATATGATTCA+AGG | - | chr4.3:70318471-70318490 | None:intergenic | 30.0% | |
| GACCTTGAATCATATATCAA+TGG | + | chr4.3:70318466-70318485 | MS.gene77015:CDS | 30.0% | |
| GATTACTTGAATACAACCTT+TGG | + | chr4.3:70319455-70319474 | MS.gene77015:intron | 30.0% | |
| TACAACTGATAGAAATGTAC+AGG | + | chr4.3:70318687-70318706 | MS.gene77015:CDS | 30.0% | |
| TACGATAACTGATAGAAACA+CGG | - | chr4.3:70317986-70318005 | None:intergenic | 30.0% | |
| TATATCAATGGTCACAATAC+AGG | + | chr4.3:70318478-70318497 | MS.gene77015:CDS | 30.0% | |
| TATGTTGGAAGAACTTGAAT+CGG | + | chr4.3:70317586-70317605 | MS.gene77015:CDS | 30.0% | |
| TCAAATAAGTCAATCCAAAC+AGG | - | chr4.3:70318993-70319012 | None:intergenic | 30.0% | |
| TCGGGTATTATTCCAATTTA+TGG | + | chr4.3:70318058-70318077 | MS.gene77015:CDS | 30.0% | |
| ! | ATTTGATAGCAAAAGCTCTA+GGG | + | chr4.3:70317840-70317859 | MS.gene77015:CDS | 30.0% |
| ! | CTCTTATGTTTGTTACAGTA+TGG | + | chr4.3:70319261-70319280 | MS.gene77015:intron | 30.0% |
| ! | CTTCTATTGTCCAAAGTATT+CGG | + | chr4.3:70318209-70318228 | MS.gene77015:CDS | 30.0% |
| ! | TTTTGGTCAGTATTCAGATT+GGG | + | chr4.3:70319385-70319404 | MS.gene77015:intron | 30.0% |
| !! | AGAGATTGATAATGGTAAAG+TGG | + | chr4.3:70317868-70317887 | MS.gene77015:CDS | 30.0% |
| !! | GTTGAATTTCTAGTAACAGT+AGG | - | chr4.3:70318526-70318545 | None:intergenic | 30.0% |
| AAGGAATGTCCTGTTTGTAA+AGG | + | chr4.3:70318022-70318041 | MS.gene77015:CDS | 35.0% | |
| ACATTCCTTTGCTTTCGAAT+AGG | - | chr4.3:70318011-70318030 | None:intergenic | 35.0% | |
| AGAGGATATTGACAATTAGC+AGG | - | chr4.3:70319245-70319264 | None:intergenic | 35.0% | |
| AGGAATGTCCTGTTTGTAAA+GGG | + | chr4.3:70318023-70318042 | MS.gene77015:CDS | 35.0% | |
| ATCCTGTTGTTGCATGTAAT+AGG | + | chr4.3:70320056-70320075 | MS.gene77015:intron | 35.0% | |
| ATTTATGGACATGGAAATGG+CGG | + | chr4.3:70318073-70318092 | MS.gene77015:CDS | 35.0% | |
| CCAATTTATGGACATGGAAA+TGG | + | chr4.3:70318070-70318089 | MS.gene77015:CDS | 35.0% | |
| CCATTTCCATGTCCATAAAT+TGG | - | chr4.3:70318073-70318092 | None:intergenic | 35.0% | |
| CTTCTCTTTCTCCTTTAAGT+AGG | + | chr4.3:70318626-70318645 | MS.gene77015:CDS | 35.0% | |
| CTTCTGTGTCTCTGTTAAAT+AGG | + | chr4.3:70320129-70320148 | MS.gene77015:CDS | 35.0% | |
| GCAATGCACATGATCTTTAT+GGG | - | chr4.3:70319511-70319530 | None:intergenic | 35.0% | |
| GCGTTCATTTGATTCTATGT+TGG | + | chr4.3:70317571-70317590 | MS.gene77015:CDS | 35.0% | |
| TATTAGAGGCTCTTATCCAA+AGG | - | chr4.3:70319474-70319493 | None:intergenic | 35.0% | |
| TATTTCCACTCCTTCTGTAT+TGG | + | chr4.3:70319774-70319793 | MS.gene77015:intron | 35.0% | |
| TCAAACGGTAGAAGAAGAAA+TGG | + | chr4.3:70320233-70320252 | MS.gene77015:CDS | 35.0% | |
| TCCTGTTGTTGCATGTAATA+GGG | + | chr4.3:70320057-70320076 | MS.gene77015:intron | 35.0% | |
| TGCAATGCACATGATCTTTA+TGG | - | chr4.3:70319512-70319531 | None:intergenic | 35.0% | |
| TGTAAGGATATTTGCCTGTT+TGG | + | chr4.3:70318976-70318995 | MS.gene77015:intron | 35.0% | |
| TGTCTAATACTCTCAACTCT+AGG | - | chr4.3:70318160-70318179 | None:intergenic | 35.0% | |
| TTCTTCTACCGTTTGATGAA+GGG | - | chr4.3:70320229-70320248 | None:intergenic | 35.0% | |
| ! | ATAGTTGAAAGTGTGAAAGG+GGG | + | chr4.3:70317800-70317819 | MS.gene77015:CDS | 35.0% |
| ! | ATGACGGTCTTTTATGTAAG+TGG | + | chr4.3:70318804-70318823 | MS.gene77015:intron | 35.0% |
| ! | CATTTGATAGCAAAAGCTCT+AGG | + | chr4.3:70317839-70317858 | MS.gene77015:CDS | 35.0% |
| ! | CTTTTGGTCAGTATTCAGAT+TGG | + | chr4.3:70319384-70319403 | MS.gene77015:intron | 35.0% |
| ! | GATAGTTGAAAGTGTGAAAG+GGG | + | chr4.3:70317799-70317818 | MS.gene77015:CDS | 35.0% |
| ! | GGATAGTTGAAAGTGTGAAA+GGG | + | chr4.3:70317798-70317817 | MS.gene77015:CDS | 35.0% |
| ! | GTCGATAATGTTGCTGTTAT+AGG | + | chr4.3:70320155-70320174 | MS.gene77015:CDS | 35.0% |
| ! | TTCTGCTGAAAGATTAGTTC+AGG | + | chr4.3:70318444-70318463 | MS.gene77015:CDS | 35.0% |
| !! | GAATTTCTAGTAACAGTAGG+AGG | - | chr4.3:70318523-70318542 | None:intergenic | 35.0% |
| !! | GATTGATAATGGTAAAGTGG+AGG | + | chr4.3:70317871-70317890 | MS.gene77015:CDS | 35.0% |
| !!! | GTTGTGGTCATTTGTTTTGT+TGG | + | chr4.3:70317960-70317979 | MS.gene77015:CDS | 35.0% |
| ACAGACAACAATGAACATGG+TGG | + | chr4.3:70318340-70318359 | MS.gene77015:CDS | 40.0% | |
| ACATGCAACAACAGGATATC+TGG | - | chr4.3:70320053-70320072 | None:intergenic | 40.0% | |
| AGAAGAAGAAGATGCTCCTT+GGG | - | chr4.3:70318194-70318213 | None:intergenic | 40.0% | |
| AGGCTCAGAAATTCAGACAA+CGG | + | chr4.3:70320175-70320194 | MS.gene77015:CDS | 40.0% | |
| AGTATGCATGCATGTAAACG+AGG | - | chr4.3:70318855-70318874 | None:intergenic | 40.0% | |
| ATCAATGGTCACAATACAGG+AGG | + | chr4.3:70318481-70318500 | MS.gene77015:CDS | 40.0% | |
| ATTGGTTATCTGAATCCGAG+AGG | - | chr4.3:70317696-70317715 | None:intergenic | 40.0% | |
| CAGACAGACAACAATGAACA+TGG | + | chr4.3:70318337-70318356 | MS.gene77015:CDS | 40.0% | |
| CGCAATCTTCTTCTTCTTCT+TGG | - | chr4.3:70318784-70318803 | None:intergenic | 40.0% | |
| CTAGATCCTTCTTCATCTAG+AGG | + | chr4.3:70318718-70318737 | MS.gene77015:intron | 40.0% | |
| CTCTCGAAGTAATTGCTTCA+AGG | - | chr4.3:70317643-70317662 | None:intergenic | 40.0% | |
| CTGATGGAAATGAAAGAAGC+CGG | + | chr4.3:70318106-70318125 | MS.gene77015:CDS | 40.0% | |
| CTGTTAGACCCTTCATCAAA+CGG | + | chr4.3:70320218-70320237 | MS.gene77015:CDS | 40.0% | |
| CTTCTACCTCTAGATGAAGA+AGG | - | chr4.3:70318727-70318746 | None:intergenic | 40.0% | |
| CTTCTTCTACCGTTTGATGA+AGG | - | chr4.3:70320230-70320249 | None:intergenic | 40.0% | |
| GAAGAAGAAGATTGCGATGA+CGG | + | chr4.3:70318788-70318807 | MS.gene77015:CDS | 40.0% | |
| GGAATGTCCTGTTTGTAAAG+GGG | + | chr4.3:70318024-70318043 | MS.gene77015:CDS | 40.0% | |
| GGGATGGAAGAGATTGATAA+TGG | + | chr4.3:70317860-70317879 | MS.gene77015:CDS | 40.0% | |
| GTATGCCTATTCGAAAGCAA+AGG | + | chr4.3:70318003-70318022 | MS.gene77015:CDS | 40.0% | |
| TAAAGGGGAGGTAACTGAAT+CGG | + | chr4.3:70318039-70318058 | MS.gene77015:CDS | 40.0% | |
| TAGAAGAAGAAGATGCTCCT+TGG | - | chr4.3:70318195-70318214 | None:intergenic | 40.0% | |
| TATGAAACCGCCGAATACTT+TGG | - | chr4.3:70318222-70318241 | None:intergenic | 40.0% | |
| TCCCTATTACATGCAACAAC+AGG | - | chr4.3:70320061-70320080 | None:intergenic | 40.0% | |
| TCTCAGGTGTGGTACTATTA+GGG | - | chr4.3:70318285-70318304 | None:intergenic | 40.0% | |
| TCTTCATCTAGAGGTAGAAG+AGG | + | chr4.3:70318727-70318746 | MS.gene77015:intron | 40.0% | |
| TGACCACAACATGTCAAAAC+AGG | - | chr4.3:70317950-70317969 | None:intergenic | 40.0% | |
| TGATTTGAATCAGGAGCCTT+TGG | + | chr4.3:70317526-70317545 | MS.gene77015:CDS | 40.0% | |
| TGCAGTTTCTCCTGTAACAT+TGG | - | chr4.3:70317714-70317733 | None:intergenic | 40.0% | |
| TGTCTCACTTGAGTAAGTTC+AGG | + | chr4.3:70319284-70319303 | MS.gene77015:intron | 40.0% | |
| TTGCTTCAAGGTGTGTGATT+CGG | - | chr4.3:70317631-70317650 | None:intergenic | 40.0% | |
| ! | AAATGAACGCACTGATGTAC+TGG | - | chr4.3:70317561-70317580 | None:intergenic | 40.0% |
| ! | CAACAAACTAGAAGCATGTG+TGG | + | chr4.3:70319631-70319650 | MS.gene77015:intron | 40.0% |
| ! | CTATTGTCCAAAGTATTCGG+CGG | + | chr4.3:70318212-70318231 | MS.gene77015:CDS | 40.0% |
| ! | GGGATAGTTGAAAGTGTGAA+AGG | + | chr4.3:70317797-70317816 | MS.gene77015:CDS | 40.0% |
| ! | TAGTTGAAAGTGTGAAAGGG+GGG | + | chr4.3:70317801-70317820 | MS.gene77015:CDS | 40.0% |
| !! | CATAACCGAATTGGTGGATT+TGG | + | chr4.3:70318238-70318257 | MS.gene77015:CDS | 40.0% |
| !! | GTACTGGTTTGATGATCCAA+AGG | - | chr4.3:70317545-70317564 | None:intergenic | 40.0% |
| !! | GTTGATAATGTTGCTGTTGC+AGG | + | chr4.3:70318652-70318671 | MS.gene77015:CDS | 40.0% |
| !!! | GATCCTGTTTTGACATGTTG+TGG | + | chr4.3:70317944-70317963 | MS.gene77015:CDS | 40.0% |
| AAAGGGGAGGTAACTGAATC+GGG | + | chr4.3:70318040-70318059 | MS.gene77015:CDS | 45.0% | |
| AAAGTGTGAAAGGGGGGAAA+AGG | + | chr4.3:70317807-70317826 | MS.gene77015:CDS | 45.0% | |
| AACGATGCTGATCAGGATGA+AGG | + | chr4.3:70317776-70317795 | MS.gene77015:CDS | 45.0% | |
| AAGCAATTACTTCGAGAGCG+AGG | + | chr4.3:70317645-70317664 | MS.gene77015:CDS | 45.0% | |
| ACCACAAACTGGAGTCAATG+AGG | - | chr4.3:70319419-70319438 | None:intergenic | 45.0% | |
| ACCACACCTGAGAGAAACAA+TGG | + | chr4.3:70318292-70318311 | MS.gene77015:CDS | 45.0% | |
| ACGATGCTGATCAGGATGAA+GGG | + | chr4.3:70317777-70317796 | MS.gene77015:CDS | 45.0% | |
| AGACAGAAGTTGCTAACCCA+AGG | + | chr4.3:70318175-70318194 | MS.gene77015:CDS | 45.0% | |
| AGTTGCTGCAGCTACAGAAT+TGG | - | chr4.3:70318608-70318627 | None:intergenic | 45.0% | |
| ATCGTCATACGAGTTGCTGT+CGG | - | chr4.3:70319807-70319826 | None:intergenic | 45.0% | |
| ATCTGAATCCGAGAGGAGTT+CGG | - | chr4.3:70317689-70317708 | None:intergenic | 45.0% | |
| ATGTCCTGTTTGTAAAGGGG+AGG | + | chr4.3:70318027-70318046 | MS.gene77015:CDS | 45.0% | |
| CGGTTTCATAACCGAATTGG+TGG | + | chr4.3:70318232-70318251 | MS.gene77015:CDS | 45.0% | |
| CTCTCAGGTGTGGTACTATT+AGG | - | chr4.3:70318286-70318305 | None:intergenic | 45.0% | |
| GACAATTAGCAGGCCCTATT+TGG | - | chr4.3:70319235-70319254 | None:intergenic | 45.0% | |
| GCTCTCCAAATCCACCAATT+CGG | - | chr4.3:70318246-70318265 | None:intergenic | 45.0% | |
| GTAAAGTGGAGGAGAGTAGT+GGG | + | chr4.3:70317882-70317901 | MS.gene77015:CDS | 45.0% | |
| GTGATGTTCAAGGCGAAGAA+CGG | + | chr4.3:70317741-70317760 | MS.gene77015:CDS | 45.0% | |
| GTGGTTCTCAACAGGTTTCA+AGG | + | chr4.3:70318359-70318378 | MS.gene77015:CDS | 45.0% | |
| GTTACCTCCCCTTTACAAAC+AGG | - | chr4.3:70318034-70318053 | None:intergenic | 45.0% | |
| GTTTCAAGGTTGCTAGAGCA+AGG | + | chr4.3:70318373-70318392 | MS.gene77015:CDS | 45.0% | |
| TGAACATGGTGGTTCTCAAC+AGG | + | chr4.3:70318351-70318370 | MS.gene77015:CDS | 45.0% | |
| TGCAGCTGTAGAATCAGTCA+CGG | - | chr4.3:70320105-70320124 | None:intergenic | 45.0% | |
| TTGTGCCAATACAGAAGGAG+TGG | - | chr4.3:70319782-70319801 | None:intergenic | 45.0% | |
| ! | ACCATTGTTTCTCTCAGGTG+TGG | - | chr4.3:70318296-70318315 | None:intergenic | 45.0% |
| ! | ACTCCTTCTGTATTGGCACA+AGG | + | chr4.3:70319781-70319800 | MS.gene77015:intron | 45.0% |
| ! | GGCAAACCATTGTTTCTCTC+AGG | - | chr4.3:70318301-70318320 | None:intergenic | 45.0% |
| !! | GATAGCAAAAGCTCTAGGGA+TGG | + | chr4.3:70317844-70317863 | MS.gene77015:CDS | 45.0% |
| !! | TCATTGACTCCAGTTTGTGG+TGG | + | chr4.3:70319418-70319437 | MS.gene77015:intron | 45.0% |
| ACAAACCAGTCAGAGAGTCG+TGG | + | chr4.3:70318562-70318581 | MS.gene77015:CDS | 50.0% | |
| ACAGGAGAAACTGCAACAGC+AGG | + | chr4.3:70317719-70317738 | MS.gene77015:CDS | 50.0% | |
| ATGTTCAAGGCGAAGAACGG+AGG | + | chr4.3:70317744-70317763 | MS.gene77015:CDS | 50.0% | |
| CAAACTGGAGTCAATGAGGC+AGG | - | chr4.3:70319415-70319434 | None:intergenic | 50.0% | |
| CGGCGGTTTCATAACCGAAT+TGG | + | chr4.3:70318229-70318248 | MS.gene77015:CDS | 50.0% | |
| CTCTCAACTCTAGGTGCCTT+AGG | - | chr4.3:70318151-70318170 | None:intergenic | 50.0% | |
| GCAACAGCAGGTGATGTTCA+AGG | + | chr4.3:70317731-70317750 | MS.gene77015:CDS | 50.0% | |
| GGTAAAGTGGAGGAGAGTAG+TGG | + | chr4.3:70317881-70317900 | MS.gene77015:CDS | 50.0% | |
| TATGGACATGGAAATGGCGG+CGG | + | chr4.3:70318076-70318095 | MS.gene77015:CDS | 50.0% | |
| TCGAGGAGGAACTCTCAAAC+CGG | - | chr4.3:70318128-70318147 | None:intergenic | 50.0% | |
| TGACTCCAGTTTGTGGTGGT+GGG | + | chr4.3:70319422-70319441 | MS.gene77015:intron | 50.0% | |
| TGTTCAAGGCGAAGAACGGA+GGG | + | chr4.3:70317745-70317764 | MS.gene77015:CDS | 50.0% | |
| TTGACTCCAGTTTGTGGTGG+TGG | + | chr4.3:70319421-70319440 | MS.gene77015:intron | 50.0% | |
| !! | GCCTCATTGACTCCAGTTTG+TGG | + | chr4.3:70319415-70319434 | MS.gene77015:intron | 50.0% |
| ACTCTAGGTGCCTTAGGTCG+AGG | - | chr4.3:70318145-70318164 | None:intergenic | 55.0% | |
| ATGACCCCACCACCACAAAC+TGG | - | chr4.3:70319430-70319449 | None:intergenic | 55.0% | |
| CTTGACCACGACTCTCTGAC+TGG | - | chr4.3:70318570-70318589 | None:intergenic | 55.0% | |
| GAGAGTTCCTCCTCGACCTA+AGG | + | chr4.3:70318132-70318151 | MS.gene77015:CDS | 55.0% | |
| TGAATCCGAGAGGAGTTCGG+CGG | - | chr4.3:70317686-70317705 | None:intergenic | 55.0% | |
| ! | CGGCCTTGTGCCAATACAGA+AGG | - | chr4.3:70319787-70319806 | None:intergenic | 55.0% |
| ! | GACTCCAGTTTGTGGTGGTG+GGG | + | chr4.3:70319423-70319442 | MS.gene77015:intron | 55.0% |
| !! | AGTTTGTGGTGGTGGGGTCA+TGG | + | chr4.3:70319429-70319448 | MS.gene77015:intron | 55.0% |
| CTAGGTGCCTTAGGTCGAGG+AGG | - | chr4.3:70318142-70318161 | None:intergenic | 60.0% | |
| GGAGCGGAACGATGCTGATC+AGG | + | chr4.3:70317769-70317788 | MS.gene77015:CDS | 60.0% | |
| GTCTGCGTGCGAGACTGAAC+AGG | - | chr4.3:70318322-70318341 | None:intergenic | 60.0% | |
| TCAAGGCGAAGAACGGAGGG+AGG | + | chr4.3:70317748-70317767 | MS.gene77015:CDS | 60.0% | |
| TGGCGGCGGTGATTGTCTGA+TGG | + | chr4.3:70318090-70318109 | MS.gene77015:CDS | 60.0% | |
| CTTCGAGAGCGAGGCAGCGT+CGG | + | chr4.3:70317654-70317673 | MS.gene77015:CDS | 65.0% | |
| GCGAAGAACGGAGGGAGGAG+CGG | + | chr4.3:70317753-70317772 | MS.gene77015:CDS | 65.0% | |
| GGTTGCCGCCGAACTCCTCT+CGG | + | chr4.3:70317678-70317697 | MS.gene77015:CDS | 65.0% | |
| TTCGAGAGCGAGGCAGCGTC+GGG | + | chr4.3:70317655-70317674 | MS.gene77015:CDS | 65.0% | |
| TCGAGAGCGAGGCAGCGTCG+GGG | + | chr4.3:70317656-70317675 | MS.gene77015:CDS | 70.0% | |
| ! | CGAGAGCGAGGCAGCGTCGG+GGG | + | chr4.3:70317657-70317676 | MS.gene77015:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 70317518 | 70320301 | 70317518 | ID=MS.gene77015 |
| chr4.3 | mRNA | 70317518 | 70320301 | 70317518 | ID=MS.gene77015.t1;Parent=MS.gene77015 |
| chr4.3 | exon | 70317518 | 70318708 | 70317518 | ID=MS.gene77015.t1.exon1;Parent=MS.gene77015.t1 |
| chr4.3 | CDS | 70317518 | 70318708 | 70317518 | ID=cds.MS.gene77015.t1;Parent=MS.gene77015.t1 |
| chr4.3 | exon | 70318740 | 70318818 | 70318740 | ID=MS.gene77015.t1.exon2;Parent=MS.gene77015.t1 |
| chr4.3 | CDS | 70318740 | 70318818 | 70318740 | ID=cds.MS.gene77015.t1;Parent=MS.gene77015.t1 |
| chr4.3 | exon | 70320078 | 70320301 | 70320078 | ID=MS.gene77015.t1.exon3;Parent=MS.gene77015.t1 |
| chr4.3 | CDS | 70320078 | 70320301 | 70320078 | ID=cds.MS.gene77015.t1;Parent=MS.gene77015.t1 |
| Gene Sequence |
| Protein sequence |
