Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21562.t1 | RHN81205.1 | 71.3 | 731 | 37 | 1 | 1 | 558 | 1 | 731 | 1.50E-280 | 974.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21562.t1 | Q9SWG3 | 34.1 | 299 | 184 | 5 | 159 | 452 | 392 | 682 | 3.1e-40 | 167.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21562.t1 | A0A396JYX6 | 71.3 | 731 | 37 | 1 | 1 | 558 | 1 | 731 | 1.1e-280 | 974.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene21562.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene21562 | 0.846011 | 2.84E-59 | -1.69E-46 |
| MS.gene049159 | MS.gene21562 | 0.850485 | 1.65E-60 | -1.69E-46 |
| MS.gene04918 | MS.gene21562 | 0.811044 | 8.52E-51 | -1.69E-46 |
| MS.gene049254 | MS.gene21562 | 0.86307 | 3.24E-64 | -1.69E-46 |
| MS.gene049283 | MS.gene21562 | 0.810969 | 8.85E-51 | -1.69E-46 |
| MS.gene049343 | MS.gene21562 | 0.850187 | 2.00E-60 | -1.69E-46 |
| MS.gene049368 | MS.gene21562 | 0.830613 | 2.66E-55 | -1.69E-46 |
| MS.gene049419 | MS.gene21562 | -0.807202 | 5.67E-50 | -1.69E-46 |
| MS.gene049452 | MS.gene21562 | 0.82546 | 4.63E-54 | -1.69E-46 |
| MS.gene049499 | MS.gene21562 | 0.818762 | 1.66E-52 | -1.69E-46 |
| MS.gene049850 | MS.gene21562 | 0.800797 | 1.22E-48 | -1.69E-46 |
| MS.gene049983 | MS.gene21562 | 0.864041 | 1.62E-64 | -1.69E-46 |
| MS.gene050105 | MS.gene21562 | 0.807782 | 4.27E-50 | -1.69E-46 |
| MS.gene050312 | MS.gene21562 | 0.803538 | 3.32E-49 | -1.69E-46 |
| MS.gene050559 | MS.gene21562 | 0.82124 | 4.49E-53 | -1.69E-46 |
| MS.gene050561 | MS.gene21562 | 0.820918 | 5.32E-53 | -1.69E-46 |
| MS.gene050562 | MS.gene21562 | 0.805763 | 1.14E-49 | -1.69E-46 |
| MS.gene050605 | MS.gene21562 | 0.801929 | 7.14E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene21562 | 0.818475 | 1.92E-52 | -1.69E-46 |
| MS.gene050737 | MS.gene21562 | 0.807974 | 3.89E-50 | -1.69E-46 |
| MS.gene050759 | MS.gene21562 | 0.816563 | 5.19E-52 | -1.69E-46 |
| MS.gene050844 | MS.gene21562 | 0.808365 | 3.21E-50 | -1.69E-46 |
| MS.gene050941 | MS.gene21562 | 0.826684 | 2.37E-54 | -1.69E-46 |
| MS.gene050962 | MS.gene21562 | 0.80615 | 9.46E-50 | -1.69E-46 |
| MS.gene051181 | MS.gene21562 | 0.823276 | 1.51E-53 | -1.69E-46 |
| MS.gene051198 | MS.gene21562 | 0.818121 | 2.31E-52 | -1.69E-46 |
| MS.gene051210 | MS.gene21562 | 0.801438 | 9.00E-49 | -1.69E-46 |
| MS.gene051332 | MS.gene21562 | 0.828357 | 9.40E-55 | -1.69E-46 |
| MS.gene051363 | MS.gene21562 | 0.832914 | 7.20E-56 | -1.69E-46 |
| MS.gene051365 | MS.gene21562 | 0.816336 | 5.83E-52 | -1.69E-46 |
| MS.gene051368 | MS.gene21562 | 0.822111 | 2.82E-53 | -1.69E-46 |
| MS.gene051452 | MS.gene21562 | 0.816575 | 5.15E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene21562 | 0.84104 | 6.05E-58 | -1.69E-46 |
| MS.gene051975 | MS.gene21562 | 0.823053 | 1.70E-53 | -1.69E-46 |
| MS.gene052012 | MS.gene21562 | 0.824555 | 7.58E-54 | -1.69E-46 |
| MS.gene052108 | MS.gene21562 | 0.821782 | 3.36E-53 | -1.69E-46 |
| MS.gene052463 | MS.gene21562 | 0.832895 | 7.28E-56 | -1.69E-46 |
| MS.gene052516 | MS.gene21562 | 0.816538 | 5.25E-52 | -1.69E-46 |
| MS.gene052518 | MS.gene21562 | 0.841065 | 5.95E-58 | -1.69E-46 |
| MS.gene052519 | MS.gene21562 | 0.855355 | 6.67E-62 | -1.69E-46 |
| MS.gene052534 | MS.gene21562 | 0.819596 | 1.07E-52 | -1.69E-46 |
| MS.gene052582 | MS.gene21562 | 0.810906 | 9.13E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene21562 | 0.819676 | 1.03E-52 | -1.69E-46 |
| MS.gene052674 | MS.gene21562 | 0.803242 | 3.83E-49 | -1.69E-46 |
| MS.gene052675 | MS.gene21562 | 0.801164 | 1.02E-48 | -1.69E-46 |
| MS.gene052677 | MS.gene21562 | 0.801273 | 9.73E-49 | -1.69E-46 |
| MS.gene052773 | MS.gene21562 | 0.827254 | 1.73E-54 | -1.69E-46 |
| MS.gene052863 | MS.gene21562 | 0.851299 | 9.72E-61 | -1.69E-46 |
| MS.gene052954 | MS.gene21562 | 0.830613 | 2.66E-55 | -1.69E-46 |
| MS.gene053006 | MS.gene21562 | 0.838345 | 3.04E-57 | -1.69E-46 |
| MS.gene053008 | MS.gene21562 | 0.853518 | 2.27E-61 | -1.69E-46 |
| MS.gene053079 | MS.gene21562 | 0.818626 | 1.78E-52 | -1.69E-46 |
| MS.gene053146 | MS.gene21562 | 0.818925 | 1.52E-52 | -1.69E-46 |
| MS.gene053166 | MS.gene21562 | 0.807167 | 5.77E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene21562 | 0.843892 | 1.06E-58 | -1.69E-46 |
| MS.gene05350 | MS.gene21562 | 0.822767 | 1.99E-53 | -1.69E-46 |
| MS.gene05364 | MS.gene21562 | 0.808506 | 3.00E-50 | -1.69E-46 |
| MS.gene053931 | MS.gene21562 | 0.819768 | 9.76E-53 | -1.69E-46 |
| MS.gene05415 | MS.gene21562 | 0.816014 | 6.88E-52 | -1.69E-46 |
| MS.gene054236 | MS.gene21562 | 0.814638 | 1.39E-51 | -1.69E-46 |
| MS.gene054479 | MS.gene21562 | 0.853261 | 2.69E-61 | -1.69E-46 |
| MS.gene054582 | MS.gene21562 | 0.821134 | 4.75E-53 | -1.69E-46 |
| MS.gene05458 | MS.gene21562 | 0.8419 | 3.59E-58 | -1.69E-46 |
| MS.gene054651 | MS.gene21562 | 0.869914 | 2.17E-66 | -1.69E-46 |
| MS.gene054657 | MS.gene21562 | 0.801719 | 7.89E-49 | -1.69E-46 |
| MS.gene054775 | MS.gene21562 | 0.826355 | 2.84E-54 | -1.69E-46 |
| MS.gene054994 | MS.gene21562 | 0.822954 | 1.80E-53 | -1.69E-46 |
| MS.gene05517 | MS.gene21562 | 0.820924 | 5.30E-53 | -1.69E-46 |
| MS.gene055222 | MS.gene21562 | 0.801388 | 9.22E-49 | -1.69E-46 |
| MS.gene055227 | MS.gene21562 | 0.819196 | 1.32E-52 | -1.69E-46 |
| MS.gene055228 | MS.gene21562 | 0.810513 | 1.11E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene21562 | 0.818129 | 2.30E-52 | -1.69E-46 |
| MS.gene055586 | MS.gene21562 | 0.825933 | 3.58E-54 | -1.69E-46 |
| MS.gene055589 | MS.gene21562 | 0.823404 | 1.41E-53 | -1.69E-46 |
| MS.gene055623 | MS.gene21562 | 0.842848 | 2.01E-58 | -1.69E-46 |
| MS.gene055701 | MS.gene21562 | 0.816453 | 5.49E-52 | -1.69E-46 |
| MS.gene055778 | MS.gene21562 | 0.808561 | 2.91E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene21562 | 0.858756 | 6.62E-63 | -1.69E-46 |
| MS.gene055841 | MS.gene21562 | 0.844929 | 5.58E-59 | -1.69E-46 |
| MS.gene055864 | MS.gene21562 | 0.800815 | 1.21E-48 | -1.69E-46 |
| MS.gene055926 | MS.gene21562 | 0.821415 | 4.09E-53 | -1.69E-46 |
| MS.gene056045 | MS.gene21562 | 0.815652 | 8.28E-52 | -1.69E-46 |
| MS.gene05604 | MS.gene21562 | 0.804997 | 1.65E-49 | -1.69E-46 |
| MS.gene056162 | MS.gene21562 | 0.812001 | 5.28E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene21562 | 0.836449 | 9.30E-57 | -1.69E-46 |
| MS.gene056480 | MS.gene21562 | 0.800216 | 1.60E-48 | -1.69E-46 |
| MS.gene056506 | MS.gene21562 | 0.82116 | 4.68E-53 | -1.69E-46 |
| MS.gene056595 | MS.gene21562 | 0.824272 | 8.83E-54 | -1.69E-46 |
| MS.gene05659 | MS.gene21562 | 0.807575 | 4.73E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene21562 | 0.840975 | 6.29E-58 | -1.69E-46 |
| MS.gene056776 | MS.gene21562 | 0.843184 | 1.64E-58 | -1.69E-46 |
| MS.gene056779 | MS.gene21562 | 0.819975 | 8.76E-53 | -1.69E-46 |
| MS.gene05686 | MS.gene21562 | 0.848776 | 4.94E-60 | -1.69E-46 |
| MS.gene05690 | MS.gene21562 | 0.848228 | 7.01E-60 | -1.69E-46 |
| MS.gene056973 | MS.gene21562 | 0.816527 | 5.28E-52 | -1.69E-46 |
| MS.gene056986 | MS.gene21562 | 0.815791 | 7.72E-52 | -1.69E-46 |
| MS.gene057026 | MS.gene21562 | 0.842734 | 2.16E-58 | -1.69E-46 |
| MS.gene057034 | MS.gene21562 | 0.828521 | 8.58E-55 | -1.69E-46 |
| MS.gene057102 | MS.gene21562 | 0.830031 | 3.69E-55 | -1.69E-46 |
| MS.gene057155 | MS.gene21562 | 0.80906 | 2.28E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene21562 | 0.875473 | 3.00E-68 | -1.69E-46 |
| MS.gene057444 | MS.gene21562 | 0.805011 | 1.64E-49 | -1.69E-46 |
| MS.gene057598 | MS.gene21562 | 0.840564 | 8.06E-58 | -1.69E-46 |
| MS.gene057611 | MS.gene21562 | 0.803648 | 3.15E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene21562 | 0.843812 | 1.11E-58 | -1.69E-46 |
| MS.gene057855 | MS.gene21562 | 0.844002 | 9.90E-59 | -1.69E-46 |
| MS.gene057915 | MS.gene21562 | 0.820352 | 7.18E-53 | -1.69E-46 |
| MS.gene058008 | MS.gene21562 | 0.837398 | 5.32E-57 | -1.69E-46 |
| MS.gene058009 | MS.gene21562 | 0.848956 | 4.40E-60 | -1.69E-46 |
| MS.gene058010 | MS.gene21562 | 0.821179 | 4.63E-53 | -1.69E-46 |
| MS.gene058037 | MS.gene21562 | 0.805193 | 1.50E-49 | -1.69E-46 |
| MS.gene058081 | MS.gene21562 | 0.827204 | 1.78E-54 | -1.69E-46 |
| MS.gene058292 | MS.gene21562 | 0.802858 | 4.60E-49 | -1.69E-46 |
| MS.gene058355 | MS.gene21562 | 0.805117 | 1.56E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene21562 | 0.816272 | 6.02E-52 | -1.69E-46 |
| MS.gene05847 | MS.gene21562 | 0.800881 | 1.17E-48 | -1.69E-46 |
| MS.gene058548 | MS.gene21562 | 0.802396 | 5.72E-49 | -1.69E-46 |
| MS.gene058595 | MS.gene21562 | 0.800171 | 1.63E-48 | -1.69E-46 |
| MS.gene058625 | MS.gene21562 | 0.837848 | 4.08E-57 | -1.69E-46 |
| MS.gene058781 | MS.gene21562 | 0.848654 | 5.34E-60 | -1.69E-46 |
| MS.gene058783 | MS.gene21562 | 0.870891 | 1.04E-66 | -1.69E-46 |
| MS.gene058979 | MS.gene21562 | 0.875294 | 3.45E-68 | -1.69E-46 |
| MS.gene05897 | MS.gene21562 | 0.840648 | 7.66E-58 | -1.69E-46 |
| MS.gene059283 | MS.gene21562 | 0.83635 | 9.85E-57 | -1.69E-46 |
| MS.gene059439 | MS.gene21562 | 0.801432 | 9.03E-49 | -1.69E-46 |
| MS.gene059570 | MS.gene21562 | 0.801636 | 8.20E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene21562 | 0.804039 | 2.62E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene21562 | 0.838038 | 3.64E-57 | -1.69E-46 |
| MS.gene05985 | MS.gene21562 | -0.826133 | 3.21E-54 | -1.69E-46 |
| MS.gene059952 | MS.gene21562 | 0.808534 | 2.95E-50 | -1.69E-46 |
| MS.gene059965 | MS.gene21562 | 0.800188 | 1.62E-48 | -1.69E-46 |
| MS.gene060011 | MS.gene21562 | 0.825754 | 3.95E-54 | -1.69E-46 |
| MS.gene060191 | MS.gene21562 | 0.805463 | 1.32E-49 | -1.69E-46 |
| MS.gene060244 | MS.gene21562 | 0.806337 | 8.64E-50 | -1.69E-46 |
| MS.gene060310 | MS.gene21562 | 0.806408 | 8.35E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene21562 | 0.835501 | 1.62E-56 | -1.69E-46 |
| MS.gene060365 | MS.gene21562 | 0.801115 | 1.05E-48 | -1.69E-46 |
| MS.gene060435 | MS.gene21562 | 0.810638 | 1.04E-50 | -1.69E-46 |
| MS.gene060527 | MS.gene21562 | 0.817007 | 4.12E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene21562 | 0.830084 | 3.58E-55 | -1.69E-46 |
| MS.gene060572 | MS.gene21562 | 0.802219 | 6.22E-49 | -1.69E-46 |
| MS.gene060685 | MS.gene21562 | 0.805522 | 1.28E-49 | -1.69E-46 |
| MS.gene060777 | MS.gene21562 | 0.815381 | 9.52E-52 | -1.69E-46 |
| MS.gene060803 | MS.gene21562 | 0.800547 | 1.37E-48 | -1.69E-46 |
| MS.gene060932 | MS.gene21562 | 0.821426 | 4.06E-53 | -1.69E-46 |
| MS.gene060933 | MS.gene21562 | 0.825903 | 3.64E-54 | -1.69E-46 |
| MS.gene060935 | MS.gene21562 | 0.892613 | 1.35E-74 | -1.69E-46 |
| MS.gene060937 | MS.gene21562 | 0.88364 | 3.78E-71 | -1.69E-46 |
| MS.gene061135 | MS.gene21562 | 0.80695 | 6.41E-50 | -1.69E-46 |
| MS.gene061188 | MS.gene21562 | 0.802066 | 6.69E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21562.t1 | MTR_2g090105 | 43.750 | 176 | 78 | 4 | 396 | 555 | 16 | 186 | 4.01e-30 | 117 |
| MS.gene21562.t1 | MTR_7g031620 | 56.790 | 81 | 35 | 0 | 3 | 83 | 2 | 82 | 1.48e-21 | 89.4 |
| MS.gene21562.t1 | MTR_7g446060 | 46.988 | 83 | 44 | 0 | 74 | 156 | 2 | 84 | 1.06e-17 | 80.1 |
| MS.gene21562.t1 | MTR_8g465780 | 29.412 | 136 | 94 | 2 | 190 | 323 | 1 | 136 | 5.06e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21562.t1 | AT4G15090 | 34.114 | 299 | 184 | 5 | 159 | 452 | 392 | 682 | 3.36e-45 | 171 |
| MS.gene21562.t1 | AT4G15090 | 34.114 | 299 | 184 | 5 | 159 | 452 | 392 | 682 | 3.36e-45 | 171 |
| MS.gene21562.t1 | AT4G15090 | 34.114 | 299 | 184 | 5 | 159 | 452 | 392 | 682 | 3.36e-45 | 171 |
| MS.gene21562.t1 | AT4G15090 | 34.114 | 299 | 184 | 5 | 159 | 452 | 392 | 682 | 3.36e-45 | 171 |
| MS.gene21562.t1 | AT4G15090 | 34.114 | 299 | 184 | 5 | 159 | 452 | 392 | 682 | 3.36e-45 | 171 |
| MS.gene21562.t1 | AT1G52520 | 37.931 | 232 | 136 | 5 | 158 | 384 | 411 | 639 | 5.21e-43 | 164 |
| MS.gene21562.t1 | AT3G22170 | 37.281 | 228 | 136 | 2 | 159 | 386 | 401 | 621 | 7.83e-42 | 161 |
| MS.gene21562.t1 | AT3G22170 | 37.281 | 228 | 136 | 2 | 159 | 386 | 401 | 621 | 7.83e-42 | 161 |
| MS.gene21562.t1 | AT4G38180 | 35.909 | 220 | 135 | 3 | 164 | 383 | 421 | 634 | 4.81e-38 | 150 |
| MS.gene21562.t1 | AT4G19990 | 35.622 | 233 | 143 | 3 | 157 | 388 | 338 | 564 | 9.83e-37 | 145 |
| MS.gene21562.t1 | AT4G19990 | 35.622 | 233 | 143 | 3 | 157 | 388 | 338 | 564 | 9.83e-37 | 145 |
| MS.gene21562.t1 | AT4G19990 | 35.622 | 233 | 143 | 3 | 157 | 388 | 338 | 564 | 1.29e-36 | 145 |
| MS.gene21562.t1 | AT4G19990 | 35.622 | 233 | 143 | 3 | 157 | 388 | 338 | 564 | 1.29e-36 | 145 |
| MS.gene21562.t1 | AT4G19990 | 35.622 | 233 | 143 | 3 | 157 | 388 | 281 | 507 | 1.43e-36 | 145 |
| MS.gene21562.t1 | AT4G19990 | 35.622 | 233 | 143 | 3 | 157 | 388 | 338 | 564 | 1.45e-36 | 145 |
| MS.gene21562.t1 | AT4G19990 | 35.622 | 233 | 143 | 3 | 157 | 388 | 352 | 578 | 1.69e-36 | 145 |
| MS.gene21562.t1 | AT1G76320 | 31.897 | 232 | 149 | 3 | 159 | 390 | 329 | 551 | 3.17e-33 | 135 |
| MS.gene21562.t1 | AT1G76320 | 31.897 | 232 | 149 | 3 | 159 | 390 | 329 | 551 | 3.17e-33 | 135 |
| MS.gene21562.t1 | AT1G76320 | 31.897 | 232 | 149 | 3 | 159 | 390 | 329 | 551 | 3.26e-33 | 135 |
| MS.gene21562.t1 | AT1G76320 | 31.897 | 232 | 149 | 3 | 159 | 390 | 329 | 551 | 6.19e-33 | 134 |
| MS.gene21562.t1 | AT2G32250 | 34.685 | 222 | 138 | 2 | 159 | 380 | 336 | 550 | 6.50e-33 | 134 |
| MS.gene21562.t1 | AT2G32250 | 34.685 | 222 | 138 | 2 | 159 | 380 | 336 | 550 | 6.50e-33 | 134 |
| MS.gene21562.t1 | AT2G32250 | 34.685 | 222 | 138 | 2 | 159 | 380 | 336 | 550 | 6.89e-33 | 134 |
| MS.gene21562.t1 | AT2G32250 | 34.685 | 222 | 138 | 2 | 159 | 380 | 336 | 550 | 6.89e-33 | 134 |
| MS.gene21562.t1 | AT2G32250 | 34.685 | 222 | 138 | 2 | 159 | 380 | 336 | 550 | 6.89e-33 | 134 |
| MS.gene21562.t1 | AT2G32250 | 34.685 | 222 | 138 | 2 | 159 | 380 | 295 | 509 | 8.23e-33 | 134 |
| MS.gene21562.t1 | AT2G32250 | 34.685 | 222 | 138 | 2 | 159 | 380 | 336 | 550 | 8.42e-33 | 134 |
| MS.gene21562.t1 | AT2G32250 | 34.685 | 222 | 138 | 2 | 159 | 380 | 295 | 509 | 8.50e-33 | 134 |
| MS.gene21562.t1 | AT4G38170 | 30.131 | 229 | 154 | 2 | 159 | 387 | 181 | 403 | 2.19e-32 | 131 |
| MS.gene21562.t1 | AT1G80010 | 33.761 | 234 | 147 | 5 | 158 | 387 | 436 | 665 | 5.14e-30 | 125 |
| MS.gene21562.t1 | AT2G27110 | 33.740 | 246 | 142 | 9 | 167 | 403 | 371 | 604 | 1.87e-29 | 124 |
| MS.gene21562.t1 | AT2G27110 | 33.740 | 246 | 142 | 9 | 167 | 403 | 371 | 604 | 1.87e-29 | 124 |
| MS.gene21562.t1 | AT2G27110 | 33.740 | 246 | 142 | 9 | 167 | 403 | 226 | 459 | 2.25e-29 | 123 |
| MS.gene21562.t1 | AT3G06250 | 31.120 | 241 | 152 | 7 | 142 | 380 | 473 | 701 | 7.86e-27 | 115 |
| MS.gene21562.t1 | AT3G06250 | 31.120 | 241 | 152 | 7 | 142 | 380 | 473 | 701 | 7.86e-27 | 115 |
| MS.gene21562.t1 | AT3G06250 | 31.120 | 241 | 152 | 7 | 142 | 380 | 473 | 701 | 7.86e-27 | 115 |
| MS.gene21562.t1 | AT5G18960 | 32.589 | 224 | 138 | 6 | 159 | 380 | 513 | 725 | 2.90e-26 | 114 |
| MS.gene21562.t1 | AT5G18960 | 32.589 | 224 | 138 | 6 | 159 | 380 | 513 | 725 | 2.90e-26 | 114 |
| MS.gene21562.t1 | AT1G10240 | 27.232 | 224 | 148 | 4 | 159 | 380 | 394 | 604 | 1.93e-16 | 83.2 |
| MS.gene21562.t1 | AT1G10240 | 27.232 | 224 | 148 | 4 | 159 | 380 | 394 | 604 | 1.93e-16 | 83.2 |
| MS.gene21562.t1 | AT5G28530 | 27.111 | 225 | 144 | 7 | 160 | 380 | 343 | 551 | 2.76e-14 | 76.3 |
| MS.gene21562.t1 | AT5G28530 | 27.570 | 214 | 139 | 6 | 167 | 380 | 417 | 614 | 4.10e-14 | 75.9 |
| MS.gene21562.t1 | AT5G28530 | 27.570 | 214 | 139 | 6 | 167 | 380 | 417 | 614 | 4.10e-14 | 75.9 |
| MS.gene21562.t1 | AT5G28530 | 26.432 | 227 | 147 | 7 | 160 | 380 | 343 | 555 | 2.71e-13 | 73.2 |
| MS.gene21562.t1 | AT5G28530 | 26.852 | 216 | 142 | 6 | 167 | 380 | 417 | 618 | 4.28e-13 | 72.8 |
Find 92 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCAATGGTAAATGCTTTC+TGG | 0.145575 | 1.1:-65789035 | None:intergenic |
| TACTTGAAATTCTTTAAATT+TGG | 0.164119 | 1.1:-65789055 | None:intergenic |
| AATTAAAGACGTGGTGTTTA+AGG | 0.198475 | 1.1:+65789176 | MS.gene21562:CDS |
| TGTTGCTTATTTGAGTTTAA+AGG | 0.212760 | 1.1:+65789237 | MS.gene21562:CDS |
| TGTATGTGAAAGACACATTT+TGG | 0.241766 | 1.1:+65788809 | MS.gene21562:CDS |
| ATTGCTTGTGTGAGTCATTT+TGG | 0.243877 | 1.1:+65788997 | MS.gene21562:CDS |
| ATGATAATGAATGGTTAAAA+TGG | 0.261144 | 1.1:+65788755 | MS.gene21562:CDS |
| TACGCTAATCGTGTAGGTTT+TGG | 0.267234 | 1.1:+65787737 | MS.gene21562:CDS |
| AGAATTGCAACGTGTTAATA+TGG | 0.267882 | 1.1:+65789392 | MS.gene21562:CDS |
| GTTCAGAACAGGAAATATTC+TGG | 0.287164 | 1.1:-65790016 | None:intergenic |
| AGTAGAAGCAACTTCATAAA+AGG | 0.295990 | 1.1:-65789424 | None:intergenic |
| GGTCTGAAGAAGAAGTTATT+AGG | 0.310139 | 1.1:+65787702 | MS.gene21562:CDS |
| TAATACTAGCTTTGAAAGAT+TGG | 0.313945 | 1.1:+65789101 | MS.gene21562:CDS |
| TTTATGATTTGAGGACAATA+TGG | 0.324306 | 1.1:-65789993 | None:intergenic |
| TCTGAGCAAAAGTGATTTCA+TGG | 0.327773 | 1.1:+65788696 | MS.gene21562:CDS |
| TTCAATAACAATTCTTGAAA+TGG | 0.335352 | 1.1:-65787936 | None:intergenic |
| TGGTAAATGCTTTCTGGAAA+TGG | 0.337237 | 1.1:-65789029 | None:intergenic |
| CTAGAACTGGGATGACATTT+AGG | 0.343463 | 1.1:+65787681 | None:intergenic |
| AGGATGGTTGATCATTCTTA+TGG | 0.354581 | 1.1:-65790141 | None:intergenic |
| TTTAGATTGGATGAGAGTTC+GGG | 0.356799 | 1.1:+65787995 | MS.gene21562:CDS |
| AATGCTTGTGTAGCTTTAGA+TGG | 0.358270 | 1.1:+65787905 | MS.gene21562:CDS |
| CTTTGTGTGCTTAAGCTCAT+TGG | 0.361479 | 1.1:+65789279 | MS.gene21562:CDS |
| TCATCAGTTTCTTGAAGAAT+AGG | 0.369535 | 1.1:-65789853 | None:intergenic |
| ATGGGCATCCTCTTTCAAAA+AGG | 0.374223 | 1.1:+65789607 | MS.gene21562:CDS |
| TAAGGTATGTTTCAATGAAA+AGG | 0.385210 | 1.1:+65789194 | MS.gene21562:CDS |
| ATTTGATGAGCGGCACCGTT+GGG | 0.394490 | 1.1:+65788780 | MS.gene21562:CDS |
| GGGTGTGGGAATCTTACTTC+TGG | 0.395908 | 1.1:+65788106 | MS.gene21562:CDS |
| ATTTACAGAAAGTGATGAAC+AGG | 0.427795 | 1.1:+65789466 | MS.gene21562:CDS |
| CAACTGTAACTCTCAGTAAT+GGG | 0.432520 | 1.1:+65789589 | MS.gene21562:CDS |
| ACAATCCTAGTCACGTGGTT+TGG | 0.434005 | 1.1:-65789561 | None:intergenic |
| ATATTCTGGTTTATGATTTG+AGG | 0.444118 | 1.1:-65790002 | None:intergenic |
| GACAACATTGAAGCGGTTTG+TGG | 0.452916 | 1.1:+65788900 | MS.gene21562:CDS |
| TATTTGATGAGCGGCACCGT+TGG | 0.456287 | 1.1:+65788779 | MS.gene21562:CDS |
| TACCTGTAAAAGTTCAGAAC+AGG | 0.463097 | 1.1:-65790027 | None:intergenic |
| GGTCTATGTCTTTACGAGGA+TGG | 0.493066 | 1.1:-65790157 | None:intergenic |
| CCAACTGTAACTCTCAGTAA+TGG | 0.495315 | 1.1:+65789588 | MS.gene21562:CDS |
| TTAACCATTCATTATCATGT+AGG | 0.496964 | 1.1:-65788750 | None:intergenic |
| CAATCTAAAATACCGTCCTC+TGG | 0.503024 | 1.1:-65787981 | None:intergenic |
| AGTATGTTCTTGTGTAATCC+TGG | 0.507755 | 1.1:-65789532 | None:intergenic |
| GGTGTTGAGATGAATGGGTG+TGG | 0.508197 | 1.1:+65788091 | MS.gene21562:CDS |
| TACTAGCTTTGAAAGATTGG+AGG | 0.508243 | 1.1:+65789104 | MS.gene21562:CDS |
| CAACTCCAAACCACGTGACT+AGG | 0.513724 | 1.1:+65789556 | MS.gene21562:CDS |
| GAGGTAAGATATTGCTTCGA+AGG | 0.514633 | 1.1:-65787857 | None:intergenic |
| CTGTGGGTGTTGAGATGAAT+GGG | 0.521887 | 1.1:+65788086 | MS.gene21562:CDS |
| AAGTGATTTCATGGAGAGGT+GGG | 0.523064 | 1.1:+65788705 | MS.gene21562:CDS |
| ATTGAATGATAAAATCGAAA+AGG | 0.526317 | 1.1:+65788939 | MS.gene21562:CDS |
| GATCAAGGTGGGATTAATGT+TGG | 0.526517 | 1.1:+65788049 | MS.gene21562:CDS |
| AAATTCTTTAAATTTGGCAA+TGG | 0.528148 | 1.1:-65789049 | None:intergenic |
| ATTGAACATAATCATGAACT+TGG | 0.529122 | 1.1:+65787953 | MS.gene21562:CDS |
| ATAACCTACATGATAATGAA+TGG | 0.540605 | 1.1:+65788746 | MS.gene21562:CDS |
| ATTTAAAGAATTTCAAGTAG+AGG | 0.542601 | 1.1:+65789059 | MS.gene21562:CDS |
| AATTCAGAACTTAATGATCA+AGG | 0.544624 | 1.1:+65788034 | MS.gene21562:CDS |
| AAAGTGATTTCATGGAGAGG+TGG | 0.559223 | 1.1:+65788704 | MS.gene21562:CDS |
| CTTCTAAAGAGCCATCCTCC+AGG | 0.560777 | 1.1:+65789514 | MS.gene21562:CDS |
| GAAAGTGATGAACAGGATCA+AGG | 0.562243 | 1.1:+65789473 | MS.gene21562:CDS |
| TCTGTGGGTGTTGAGATGAA+TGG | 0.568290 | 1.1:+65788085 | MS.gene21562:CDS |
| TACCTCGAAAACACAGTGTA+GGG | 0.568827 | 1.1:+65787874 | MS.gene21562:CDS |
| TTACCTCGAAAACACAGTGT+AGG | 0.570982 | 1.1:+65787873 | MS.gene21562:CDS |
| ATGAATTACGCTAATCGTGT+AGG | 0.573095 | 1.1:+65787731 | MS.gene21562:CDS |
| GTGTTGAGATGAATGGGTGT+GGG | 0.575538 | 1.1:+65788092 | MS.gene21562:CDS |
| TAAAATGGTTATTTGATGAG+CGG | 0.580254 | 1.1:+65788770 | MS.gene21562:CDS |
| ACTCAAAGACAACATTGAAG+CGG | 0.582318 | 1.1:+65788893 | MS.gene21562:CDS |
| AAACGATCAAAGTCAAGAAG+AGG | 0.583429 | 1.1:+65789707 | MS.gene21562:CDS |
| CAGAACTTAATGATCAAGGT+GGG | 0.583962 | 1.1:+65788038 | MS.gene21562:CDS |
| AGATATACATTGATGAAACA+TGG | 0.592243 | 1.1:+65789363 | MS.gene21562:CDS |
| ACATCTTAGTGATGTAAACC+AGG | 0.599828 | 1.1:+65789882 | MS.gene21562:CDS |
| TAGCATGTAATTGTGCAAGA+AGG | 0.600918 | 1.1:+65787813 | MS.gene21562:CDS |
| GGTAGAAATCTTCAATCTGT+GGG | 0.601916 | 1.1:+65788070 | MS.gene21562:CDS |
| TAAAATCGAAAAGGAAAGCA+TGG | 0.602750 | 1.1:+65788948 | MS.gene21562:CDS |
| CCATTACTGAGAGTTACAGT+TGG | 0.609550 | 1.1:-65789588 | None:intergenic |
| AATGTGTCTTTCACATACAC+AGG | 0.609838 | 1.1:-65788805 | None:intergenic |
| CGAAAACACAGTGTAGGGCT+AGG | 0.611004 | 1.1:+65787879 | MS.gene21562:CDS |
| TCTTGTGTAATCCTGGAGGA+TGG | 0.617853 | 1.1:-65789525 | None:intergenic |
| TGGTAGAAATCTTCAATCTG+TGG | 0.643326 | 1.1:+65788069 | MS.gene21562:CDS |
| GTTCGGGGACTCATGTAGAG+AGG | 0.649720 | 1.1:+65788011 | MS.gene21562:CDS |
| AACTTGGTCAAACCAGAGGA+CGG | 0.650612 | 1.1:+65787969 | MS.gene21562:CDS |
| AGTGATTTCATGGAGAGGTG+GGG | 0.655787 | 1.1:+65788706 | MS.gene21562:CDS |
| CAAAACTCCAAAGAACAGCA+AGG | 0.655801 | 1.1:+65789677 | MS.gene21562:CDS |
| GGTTGGTCTATGTCTTTACG+AGG | 0.660233 | 1.1:-65790161 | None:intergenic |
| TCAGAACTTAATGATCAAGG+TGG | 0.664170 | 1.1:+65788037 | MS.gene21562:CDS |
| TGGCTCTTTAGAAGATAACA+CGG | 0.664729 | 1.1:-65789505 | None:intergenic |
| TTAGATTGGATGAGAGTTCG+GGG | 0.678804 | 1.1:+65787996 | MS.gene21562:CDS |
| TCACATACACAGGAACCCAA+CGG | 0.679348 | 1.1:-65788795 | None:intergenic |
| AAAAGAGAAAATTAAAGACG+TGG | 0.683650 | 1.1:+65789167 | MS.gene21562:CDS |
| GCAAAAGTGATTTCATGGAG+AGG | 0.684724 | 1.1:+65788701 | MS.gene21562:CDS |
| CTGGAATGTCGACTGCACAA+CGG | 0.692769 | 1.1:+65788833 | MS.gene21562:CDS |
| CATGAACTTGGTCAAACCAG+AGG | 0.694396 | 1.1:+65787965 | MS.gene21562:CDS |
| GGTGGAGGAAGTATGTAAAG+CGG | 0.705310 | 1.1:+65789340 | MS.gene21562:CDS |
| GATCAACAATCCTAGTCACG+TGG | 0.707154 | 1.1:-65789566 | None:intergenic |
| TTTACATACTTCCTCCACCG+TGG | 0.708646 | 1.1:-65789336 | None:intergenic |
| AATCGAAAAGGAAAGCATGG+CGG | 0.726163 | 1.1:+65788951 | MS.gene21562:CDS |
| ATGTTCTTGTGTAATCCTGG+AGG | 0.762199 | 1.1:-65789529 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAATATACAAAATTTATTTT+GGG | + | chr1.1:65788273-65788292 | MS.gene21562:intron | 10.0% |
| !! | AAATAGAGAAAATAAATTTG+TGG | - | chr1.1:65789745-65789764 | None:intergenic | 15.0% |
| !! | TACTTGAAATTCTTTAAATT+TGG | - | chr1.1:65789058-65789077 | None:intergenic | 15.0% |
| !!! | ATAAATAAATGTCTGATTTT+GGG | + | chr1.1:65789802-65789821 | MS.gene21562:intron | 15.0% |
| !!! | ATACTTATTTGTTAAATAAG+TGG | - | chr1.1:65788356-65788375 | None:intergenic | 15.0% |
| !!! | ATTTATTTGATTATTTCTTG+TGG | + | chr1.1:65790049-65790068 | MS.gene21562:intron | 15.0% |
| !!! | GGAATATACAAAATTTATTT+TGG | + | chr1.1:65788272-65788291 | MS.gene21562:intron | 15.0% |
| !! | AAATTCTTTAAATTTGGCAA+TGG | - | chr1.1:65789052-65789071 | None:intergenic | 20.0% |
| !! | ATTGAATGATAAAATCGAAA+AGG | + | chr1.1:65788939-65788958 | MS.gene21562:CDS | 20.0% |
| !! | TTATTTGAACATTTACATTG+TGG | + | chr1.1:65789938-65789957 | MS.gene21562:intron | 20.0% |
| !! | TTCAATAACAATTCTTGAAA+TGG | - | chr1.1:65787939-65787958 | None:intergenic | 20.0% |
| !!! | ATGATAATGAATGGTTAAAA+TGG | + | chr1.1:65788755-65788774 | MS.gene21562:CDS | 20.0% |
| !!! | ATTTAAAGAATTTCAAGTAG+AGG | + | chr1.1:65789059-65789078 | MS.gene21562:CDS | 20.0% |
| !!! | CATAAATAAATGTCTGATTT+TGG | + | chr1.1:65789801-65789820 | MS.gene21562:intron | 20.0% |
| ! | AAAAGAGAAAATTAAAGACG+TGG | + | chr1.1:65789167-65789186 | MS.gene21562:CDS | 25.0% |
| ! | AATTCAGAACTTAATGATCA+AGG | + | chr1.1:65788034-65788053 | MS.gene21562:CDS | 25.0% |
| ! | AGATATACATTGATGAAACA+TGG | + | chr1.1:65789363-65789382 | MS.gene21562:CDS | 25.0% |
| ! | ATTGAACATAATCATGAACT+TGG | + | chr1.1:65787953-65787972 | MS.gene21562:CDS | 25.0% |
| ! | TAAAATGGTTATTTGATGAG+CGG | + | chr1.1:65788770-65788789 | MS.gene21562:CDS | 25.0% |
| ! | TAAGGTATGTTTCAATGAAA+AGG | + | chr1.1:65789194-65789213 | MS.gene21562:CDS | 25.0% |
| ! | TTAACCATTCATTATCATGT+AGG | - | chr1.1:65788753-65788772 | None:intergenic | 25.0% |
| ! | TTTATGATTTGAGGACAATA+TGG | - | chr1.1:65789996-65790015 | None:intergenic | 25.0% |
| ! | TTTCATTGCTTTATCATCTT+CGG | - | chr1.1:65788536-65788555 | None:intergenic | 25.0% |
| !! | ATAACCTACATGATAATGAA+TGG | + | chr1.1:65788746-65788765 | MS.gene21562:CDS | 25.0% |
| !! | ATTTTATTGTGCAATGGATA+TGG | + | chr1.1:65788240-65788259 | MS.gene21562:intron | 25.0% |
| !! | TAGTCAATTTTATTGTGCAA+TGG | + | chr1.1:65788234-65788253 | MS.gene21562:intron | 25.0% |
| !! | TGTTGCTTATTTGAGTTTAA+AGG | + | chr1.1:65789237-65789256 | MS.gene21562:CDS | 25.0% |
| !!! | AAATAAAAATAAAGAGCACC+AGG | - | chr1.1:65789924-65789943 | None:intergenic | 25.0% |
| !!! | AGTATAGACTCATTTTTTGA+TGG | + | chr1.1:65788862-65788881 | MS.gene21562:CDS | 25.0% |
| !!! | ATATTCTGGTTTATGATTTG+AGG | - | chr1.1:65790005-65790024 | None:intergenic | 25.0% |
| !!! | GTATAGACTCATTTTTTGAT+GGG | + | chr1.1:65788863-65788882 | MS.gene21562:CDS | 25.0% |
| !!! | TAATACTAGCTTTGAAAGAT+TGG | + | chr1.1:65789101-65789120 | MS.gene21562:CDS | 25.0% |
| AATTAAAGACGTGGTGTTTA+AGG | + | chr1.1:65789176-65789195 | MS.gene21562:CDS | 30.0% | |
| AGAATTGCAACGTGTTAATA+TGG | + | chr1.1:65789392-65789411 | MS.gene21562:CDS | 30.0% | |
| AGCAATGAAAAATGCAATTG+AGG | + | chr1.1:65788546-65788565 | MS.gene21562:intron | 30.0% | |
| AGTAGAAGCAACTTCATAAA+AGG | - | chr1.1:65789427-65789446 | None:intergenic | 30.0% | |
| AGTTCAAAAAATGCAGATGA+TGG | + | chr1.1:65787773-65787792 | MS.gene21562:CDS | 30.0% | |
| ATAAAATAGTCTGACCATGA+TGG | - | chr1.1:65788411-65788430 | None:intergenic | 30.0% | |
| ATTTACAGAAAGTGATGAAC+AGG | + | chr1.1:65789466-65789485 | MS.gene21562:CDS | 30.0% | |
| CAATGGATATGGATGATAAA+AGG | + | chr1.1:65788251-65788270 | MS.gene21562:intron | 30.0% | |
| CGTGGCAAAATATAAAAAGA+CGG | - | chr1.1:65789321-65789340 | None:intergenic | 30.0% | |
| TAAAATCGAAAAGGAAAGCA+TGG | + | chr1.1:65788948-65788967 | MS.gene21562:CDS | 30.0% | |
| TCATCAGTTTCTTGAAGAAT+AGG | - | chr1.1:65789856-65789875 | None:intergenic | 30.0% | |
| TGATAAAACATCTGTTTCGT+AGG | + | chr1.1:65789968-65789987 | MS.gene21562:intron | 30.0% | |
| ! | AAATAAGTATGACTTGCCAT+TGG | + | chr1.1:65788366-65788385 | MS.gene21562:intron | 30.0% |
| ! | ATGGTCAGACTATTTTATTG+GGG | + | chr1.1:65788413-65788432 | MS.gene21562:intron | 30.0% |
| ! | CATGGTCAGACTATTTTATT+GGG | + | chr1.1:65788412-65788431 | MS.gene21562:intron | 30.0% |
| ! | CGTCTTTTTATATTTTGCCA+CGG | + | chr1.1:65789319-65789338 | MS.gene21562:CDS | 30.0% |
| ! | GATTATTTCTTGTGGTAACA+TGG | + | chr1.1:65790057-65790076 | MS.gene21562:intron | 30.0% |
| ! | GTATGTGAAAGACACATTTT+GGG | + | chr1.1:65788810-65788829 | MS.gene21562:CDS | 30.0% |
| ! | TCATGGTCAGACTATTTTAT+TGG | + | chr1.1:65788411-65788430 | MS.gene21562:intron | 30.0% |
| ! | TGTATGTGAAAGACACATTT+TGG | + | chr1.1:65788809-65788828 | MS.gene21562:CDS | 30.0% |
| ! | TTTTAGATTGGATGAGAGTT+CGG | + | chr1.1:65787994-65788013 | MS.gene21562:CDS | 30.0% |
| ! | TTTTGGTGAAGTCATAACTT+TGG | + | chr1.1:65788327-65788346 | MS.gene21562:intron | 30.0% |
| !!! | ATTTTGGGTTTTTTATGGCA+GGG | + | chr1.1:65789817-65789836 | MS.gene21562:intron | 30.0% |
| !!! | GTCTGATTTTGGGTTTTTTA+TGG | + | chr1.1:65789812-65789831 | MS.gene21562:intron | 30.0% |
| !!! | TTATTTTCCTTGCTGTTCTT+TGG | - | chr1.1:65789687-65789706 | None:intergenic | 30.0% |
| AAACGATCAAAGTCAAGAAG+AGG | + | chr1.1:65789707-65789726 | MS.gene21562:CDS | 35.0% | |
| AAGAAGGTTCCAGAAATGTT+GGG | + | chr1.1:65788616-65788635 | MS.gene21562:intron | 35.0% | |
| AATGTGTCTTTCACATACAC+AGG | - | chr1.1:65788808-65788827 | None:intergenic | 35.0% | |
| ACATCTTAGTGATGTAAACC+AGG | + | chr1.1:65789882-65789901 | MS.gene21562:CDS | 35.0% | |
| ACTCAAAGACAACATTGAAG+CGG | + | chr1.1:65788893-65788912 | MS.gene21562:CDS | 35.0% | |
| AGATGGTTAGAATGTATGCA+TGG | + | chr1.1:65788487-65788506 | MS.gene21562:intron | 35.0% | |
| AGGATGGTTGATCATTCTTA+TGG | - | chr1.1:65790144-65790163 | None:intergenic | 35.0% | |
| AGTATGTTCTTGTGTAATCC+TGG | - | chr1.1:65789535-65789554 | None:intergenic | 35.0% | |
| ATGAATTACGCTAATCGTGT+AGG | + | chr1.1:65787731-65787750 | MS.gene21562:CDS | 35.0% | |
| ATTCTGTGCAGAAAGTAAGA+CGG | + | chr1.1:65788146-65788165 | MS.gene21562:intron | 35.0% | |
| CAACTGTAACTCTCAGTAAT+GGG | + | chr1.1:65789589-65789608 | MS.gene21562:CDS | 35.0% | |
| CAGAACTTAATGATCAAGGT+GGG | + | chr1.1:65788038-65788057 | MS.gene21562:CDS | 35.0% | |
| CTTGTGGCATATAATGAAGA+AGG | + | chr1.1:65788600-65788619 | MS.gene21562:intron | 35.0% | |
| GAGTATTTACCCAACATTTC+TGG | - | chr1.1:65788628-65788647 | None:intergenic | 35.0% | |
| GGTAGAAATCTTCAATCTGT+GGG | + | chr1.1:65788070-65788089 | MS.gene21562:CDS | 35.0% | |
| GGTCTGAAGAAGAAGTTATT+AGG | + | chr1.1:65787702-65787721 | MS.gene21562:CDS | 35.0% | |
| GGTGATGAAAATATAGAACC+TGG | + | chr1.1:65789903-65789922 | MS.gene21562:intron | 35.0% | |
| GTTCAGAACAGGAAATATTC+TGG | - | chr1.1:65790019-65790038 | None:intergenic | 35.0% | |
| TACCTGTAAAAGTTCAGAAC+AGG | - | chr1.1:65790030-65790049 | None:intergenic | 35.0% | |
| TAGCATGTAATTGTGCAAGA+AGG | + | chr1.1:65787813-65787832 | MS.gene21562:CDS | 35.0% | |
| TCAGAACTTAATGATCAAGG+TGG | + | chr1.1:65788037-65788056 | MS.gene21562:CDS | 35.0% | |
| TCTGAGCAAAAGTGATTTCA+TGG | + | chr1.1:65788696-65788715 | MS.gene21562:CDS | 35.0% | |
| TCTTCGGTAATTATGCCATT+TGG | - | chr1.1:65788520-65788539 | None:intergenic | 35.0% | |
| TGGATGCTAAAACTCTTACT+TGG | + | chr1.1:65788455-65788474 | MS.gene21562:intron | 35.0% | |
| TGGTAGAAATCTTCAATCTG+TGG | + | chr1.1:65788069-65788088 | MS.gene21562:CDS | 35.0% | |
| TTACTTGGTTGTTCACAAGA+TGG | + | chr1.1:65788470-65788489 | MS.gene21562:intron | 35.0% | |
| TTTAGATTGGATGAGAGTTC+GGG | + | chr1.1:65787995-65788014 | MS.gene21562:CDS | 35.0% | |
| ! | AGGGCTGCATATGAATATTT+TGG | + | chr1.1:65788310-65788329 | MS.gene21562:intron | 35.0% |
| ! | ATTGCTTGTGTGAGTCATTT+TGG | + | chr1.1:65788997-65789016 | MS.gene21562:CDS | 35.0% |
| ! | CTTTTTATATTTTGCCACGG+TGG | + | chr1.1:65789322-65789341 | MS.gene21562:CDS | 35.0% |
| ! | GGTTCTATATTTTCATCACC+TGG | - | chr1.1:65789903-65789922 | None:intergenic | 35.0% |
| ! | GTCTATCAAAACACTTTTGC+AGG | + | chr1.1:65788657-65788676 | MS.gene21562:intron | 35.0% |
| ! | TGGCTCTTTAGAAGATAACA+CGG | - | chr1.1:65789508-65789527 | None:intergenic | 35.0% |
| ! | TGGTAAATGCTTTCTGGAAA+TGG | - | chr1.1:65789032-65789051 | None:intergenic | 35.0% |
| !! | AATGCTTGTGTAGCTTTAGA+TGG | + | chr1.1:65787905-65787924 | MS.gene21562:CDS | 35.0% |
| !! | GATGTCTTCCTTTTTGAAAG+AGG | - | chr1.1:65789618-65789637 | None:intergenic | 35.0% |
| !! | TACTAGCTTTGAAAGATTGG+AGG | + | chr1.1:65789104-65789123 | MS.gene21562:CDS | 35.0% |
| !! | TTCCTGTTCTGAACTTTTAC+AGG | + | chr1.1:65790025-65790044 | MS.gene21562:CDS | 35.0% |
| !!! | GATTTTGGGTTTTTTATGGC+AGG | + | chr1.1:65789816-65789835 | MS.gene21562:intron | 35.0% |
| AAAGTAAGACGGCTAAGACT+TGG | + | chr1.1:65788157-65788176 | MS.gene21562:intron | 40.0% | |
| AAAGTGATTTCATGGAGAGG+TGG | + | chr1.1:65788704-65788723 | MS.gene21562:CDS | 40.0% | |
| AAGTAAGACGGCTAAGACTT+GGG | + | chr1.1:65788158-65788177 | MS.gene21562:intron | 40.0% | |
| AAGTGATTTCATGGAGAGGT+GGG | + | chr1.1:65788705-65788724 | MS.gene21562:CDS | 40.0% | |
| ATGATGGTTCACTCCAACAA+CGG | - | chr1.1:65788395-65788414 | None:intergenic | 40.0% | |
| ATGGGCATCCTCTTTCAAAA+AGG | + | chr1.1:65789607-65789626 | MS.gene21562:CDS | 40.0% | |
| ATGTTCTTGTGTAATCCTGG+AGG | - | chr1.1:65789532-65789551 | None:intergenic | 40.0% | |
| CAAAACTCCAAAGAACAGCA+AGG | + | chr1.1:65789677-65789696 | MS.gene21562:CDS | 40.0% | |
| CCAACTGTAACTCTCAGTAA+TGG | + | chr1.1:65789588-65789607 | MS.gene21562:CDS | 40.0% | |
| CCATTACTGAGAGTTACAGT+TGG | - | chr1.1:65789591-65789610 | None:intergenic | 40.0% | |
| CTTTGTGTGCTTAAGCTCAT+TGG | + | chr1.1:65789279-65789298 | MS.gene21562:CDS | 40.0% | |
| GAAAGTGATGAACAGGATCA+AGG | + | chr1.1:65789473-65789492 | MS.gene21562:CDS | 40.0% | |
| GAAGAAGGTTCCAGAAATGT+TGG | + | chr1.1:65788615-65788634 | MS.gene21562:intron | 40.0% | |
| GAGGTAAGATATTGCTTCGA+AGG | - | chr1.1:65787860-65787879 | None:intergenic | 40.0% | |
| GATCAAGGTGGGATTAATGT+TGG | + | chr1.1:65788049-65788068 | MS.gene21562:CDS | 40.0% | |
| GCAAAAGTGATTTCATGGAG+AGG | + | chr1.1:65788701-65788720 | MS.gene21562:CDS | 40.0% | |
| TACCTCGAAAACACAGTGTA+GGG | + | chr1.1:65787874-65787893 | MS.gene21562:CDS | 40.0% | |
| TGCCTGCAAAAAGAACACAT+GGG | - | chr1.1:65790116-65790135 | None:intergenic | 40.0% | |
| TGGCAATGGTAAATGCTTTC+TGG | - | chr1.1:65789038-65789057 | None:intergenic | 40.0% | |
| TTACCTCGAAAACACAGTGT+AGG | + | chr1.1:65787873-65787892 | MS.gene21562:CDS | 40.0% | |
| TTAGATTGGATGAGAGTTCG+GGG | + | chr1.1:65787996-65788015 | MS.gene21562:CDS | 40.0% | |
| ! | AATCGAAAAGGAAAGCATGG+CGG | + | chr1.1:65788951-65788970 | MS.gene21562:CDS | 40.0% |
| ! | CAAAACACTTTTGCAGGATG+TGG | + | chr1.1:65788663-65788682 | MS.gene21562:intron | 40.0% |
| ! | CAATCTAAAATACCGTCCTC+TGG | - | chr1.1:65787984-65788003 | None:intergenic | 40.0% |
| ! | TACGCTAATCGTGTAGGTTT+TGG | + | chr1.1:65787737-65787756 | MS.gene21562:CDS | 40.0% |
| ! | TTTATATTTTGCCACGGTGG+AGG | + | chr1.1:65789325-65789344 | MS.gene21562:CDS | 40.0% |
| !! | CAGAGGACGGTATTTTAGAT+TGG | + | chr1.1:65787982-65788001 | MS.gene21562:CDS | 40.0% |
| AACTTGGTCAAACCAGAGGA+CGG | + | chr1.1:65787969-65787988 | MS.gene21562:CDS | 45.0% | |
| ACAATCCTAGTCACGTGGTT+TGG | - | chr1.1:65789564-65789583 | None:intergenic | 45.0% | |
| AGTGATTTCATGGAGAGGTG+GGG | + | chr1.1:65788706-65788725 | MS.gene21562:CDS | 45.0% | |
| ATGCATGGACATGCTCCAAA+TGG | + | chr1.1:65788502-65788521 | MS.gene21562:intron | 45.0% | |
| CATGAACTTGGTCAAACCAG+AGG | + | chr1.1:65787965-65787984 | MS.gene21562:CDS | 45.0% | |
| GACAACATTGAAGCGGTTTG+TGG | + | chr1.1:65788900-65788919 | MS.gene21562:CDS | 45.0% | |
| GATCAACAATCCTAGTCACG+TGG | - | chr1.1:65789569-65789588 | None:intergenic | 45.0% | |
| GTGCCTGCAAAAAGAACACA+TGG | - | chr1.1:65790117-65790136 | None:intergenic | 45.0% | |
| GTGTGCAATATTGTCGAACG+TGG | + | chr1.1:65788435-65788454 | MS.gene21562:intron | 45.0% | |
| GTGTTGAGATGAATGGGTGT+GGG | + | chr1.1:65788092-65788111 | MS.gene21562:CDS | 45.0% | |
| GTTGTTGGAGTGAACCATCA+TGG | + | chr1.1:65788394-65788413 | MS.gene21562:intron | 45.0% | |
| TCACATACACAGGAACCCAA+CGG | - | chr1.1:65788798-65788817 | None:intergenic | 45.0% | |
| TCTTGTGTAATCCTGGAGGA+TGG | - | chr1.1:65789528-65789547 | None:intergenic | 45.0% | |
| TGATGGTTCACTCCAACAAC+GGG | - | chr1.1:65788394-65788413 | None:intergenic | 45.0% | |
| TTCCTAAAGCTCGTCATCGA+TGG | + | chr1.1:65788575-65788594 | MS.gene21562:intron | 45.0% | |
| TTTACATACTTCCTCCACCG+TGG | - | chr1.1:65789339-65789358 | None:intergenic | 45.0% | |
| ! | GGTGGAGGAAGTATGTAAAG+CGG | + | chr1.1:65789340-65789359 | MS.gene21562:CDS | 45.0% |
| ! | GTGAAAGACACATTTTGGGC+TGG | + | chr1.1:65788814-65788833 | MS.gene21562:CDS | 45.0% |
| ! | TGCCCATGTGTTCTTTTTGC+AGG | + | chr1.1:65790111-65790130 | MS.gene21562:intron | 45.0% |
| !! | CTGTGGGTGTTGAGATGAAT+GGG | + | chr1.1:65788086-65788105 | MS.gene21562:CDS | 45.0% |
| !! | TCGATGACGAGCTTTAGGAA+AGG | - | chr1.1:65788575-65788594 | None:intergenic | 45.0% |
| !! | TCTGTGGGTGTTGAGATGAA+TGG | + | chr1.1:65788085-65788104 | MS.gene21562:CDS | 45.0% |
| ATTTGATGAGCGGCACCGTT+GGG | + | chr1.1:65788780-65788799 | MS.gene21562:CDS | 50.0% | |
| CAACTCCAAACCACGTGACT+AGG | + | chr1.1:65789556-65789575 | MS.gene21562:CDS | 50.0% | |
| CACCATCGATGACGAGCTTT+AGG | - | chr1.1:65788580-65788599 | None:intergenic | 50.0% | |
| CGAAAACACAGTGTAGGGCT+AGG | + | chr1.1:65787879-65787898 | MS.gene21562:CDS | 50.0% | |
| GATGGTTCACTCCAACAACG+GGG | - | chr1.1:65788393-65788412 | None:intergenic | 50.0% | |
| GGGTGTGGGAATCTTACTTC+TGG | + | chr1.1:65788106-65788125 | MS.gene21562:CDS | 50.0% | |
| TATTTGATGAGCGGCACCGT+TGG | + | chr1.1:65788779-65788798 | MS.gene21562:CDS | 50.0% | |
| TTGGGCAGATGCGAGATGTA+GGG | + | chr1.1:65788291-65788310 | MS.gene21562:intron | 50.0% | |
| TTTGGGCAGATGCGAGATGT+AGG | + | chr1.1:65788290-65788309 | MS.gene21562:intron | 50.0% | |
| ! | AGCCCTACACTGTGTTTTCG+AGG | - | chr1.1:65787879-65787898 | None:intergenic | 50.0% |
| ! | CTGGAATGTCGACTGCACAA+CGG | + | chr1.1:65788833-65788852 | MS.gene21562:CDS | 50.0% |
| ! | CTTCTAAAGAGCCATCCTCC+AGG | + | chr1.1:65789514-65789533 | MS.gene21562:CDS | 50.0% |
| ! | GGTGTTGAGATGAATGGGTG+TGG | + | chr1.1:65788091-65788110 | MS.gene21562:CDS | 50.0% |
| ACTCCAACAACGGGGACCAA+TGG | - | chr1.1:65788385-65788404 | None:intergenic | 55.0% | |
| AGACGGCTAAGACTTGGGAG+AGG | + | chr1.1:65788163-65788182 | MS.gene21562:intron | 55.0% | |
| CTCGTCATCGATGGTGCTTG+TGG | + | chr1.1:65788584-65788603 | MS.gene21562:intron | 55.0% | |
| GTTCGGGGACTCATGTAGAG+AGG | + | chr1.1:65788011-65788030 | MS.gene21562:CDS | 55.0% | |
| TTGCCATTGGTCCCCGTTGT+TGG | + | chr1.1:65788379-65788398 | MS.gene21562:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 65787692 | 65790168 | 65787692 | ID=MS.gene21562 |
| chr1.1 | mRNA | 65787692 | 65790168 | 65787692 | ID=MS.gene21562.t1;Parent=MS.gene21562 |
| chr1.1 | exon | 65787692 | 65788159 | 65787692 | ID=MS.gene21562.t1.exon1;Parent=MS.gene21562.t1 |
| chr1.1 | CDS | 65787692 | 65788159 | 65787692 | ID=cds.MS.gene21562.t1;Parent=MS.gene21562.t1 |
| chr1.1 | exon | 65788679 | 65789728 | 65788679 | ID=MS.gene21562.t1.exon2;Parent=MS.gene21562.t1 |
| chr1.1 | CDS | 65788679 | 65789728 | 65788679 | ID=cds.MS.gene21562.t1;Parent=MS.gene21562.t1 |
| chr1.1 | exon | 65789838 | 65789903 | 65789838 | ID=MS.gene21562.t1.exon3;Parent=MS.gene21562.t1 |
| chr1.1 | CDS | 65789838 | 65789903 | 65789838 | ID=cds.MS.gene21562.t1;Parent=MS.gene21562.t1 |
| chr1.1 | exon | 65789990 | 65790046 | 65789990 | ID=MS.gene21562.t1.exon4;Parent=MS.gene21562.t1 |
| chr1.1 | CDS | 65789990 | 65790046 | 65789990 | ID=cds.MS.gene21562.t1;Parent=MS.gene21562.t1 |
| chr1.1 | exon | 65790133 | 65790168 | 65790133 | ID=MS.gene21562.t1.exon5;Parent=MS.gene21562.t1 |
| chr1.1 | CDS | 65790133 | 65790168 | 65790133 | ID=cds.MS.gene21562.t1;Parent=MS.gene21562.t1 |
| Gene Sequence |
| Protein sequence |
