Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32893.t1 | XP_024634192.1 | 99.1 | 350 | 3 | 0 | 1 | 350 | 565 | 914 | 4.90E-168 | 600.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32893.t1 | F4K4L7 | 52.5 | 366 | 137 | 6 | 2 | 339 | 494 | 850 | 2.3e-73 | 277.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32893.t1 | A0A396IXC6 | 99.1 | 350 | 3 | 0 | 1 | 350 | 565 | 914 | 3.6e-168 | 600.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene32893 | 0.805597 | 1.24E-49 | -1.69E-46 |
| MS.gene04918 | MS.gene32893 | 0.818981 | 1.48E-52 | -1.69E-46 |
| MS.gene049254 | MS.gene32893 | 0.840147 | 1.04E-57 | -1.69E-46 |
| MS.gene049342 | MS.gene32893 | 0.82162 | 3.67E-53 | -1.69E-46 |
| MS.gene049343 | MS.gene32893 | 0.847598 | 1.04E-59 | -1.69E-46 |
| MS.gene049711 | MS.gene32893 | 0.846598 | 1.96E-59 | -1.69E-46 |
| MS.gene049824 | MS.gene32893 | 0.810478 | 1.13E-50 | -1.69E-46 |
| MS.gene049825 | MS.gene32893 | 0.830985 | 2.16E-55 | -1.69E-46 |
| MS.gene049850 | MS.gene32893 | 0.81581 | 7.64E-52 | -1.69E-46 |
| MS.gene049873 | MS.gene32893 | 0.85712 | 2.03E-62 | -1.69E-46 |
| MS.gene050355 | MS.gene32893 | 0.800265 | 1.56E-48 | -1.69E-46 |
| MS.gene050559 | MS.gene32893 | 0.837992 | 3.75E-57 | -1.69E-46 |
| MS.gene050561 | MS.gene32893 | 0.824065 | 9.88E-54 | -1.69E-46 |
| MS.gene050562 | MS.gene32893 | 0.815639 | 8.34E-52 | -1.69E-46 |
| MS.gene050799 | MS.gene32893 | 0.834234 | 3.37E-56 | -1.69E-46 |
| MS.gene051744 | MS.gene32893 | 0.868142 | 8.13E-66 | -1.69E-46 |
| MS.gene051957 | MS.gene32893 | 0.810759 | 9.82E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene32893 | 0.812167 | 4.86E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene32893 | 0.876252 | 1.62E-68 | -1.69E-46 |
| MS.gene052533 | MS.gene32893 | 0.81168 | 6.20E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene32893 | 0.814725 | 1.33E-51 | -1.69E-46 |
| MS.gene052863 | MS.gene32893 | 0.8159 | 7.29E-52 | -1.69E-46 |
| MS.gene053006 | MS.gene32893 | 0.800692 | 1.28E-48 | -1.69E-46 |
| MS.gene053145 | MS.gene32893 | 0.830055 | 3.64E-55 | -1.69E-46 |
| MS.gene053146 | MS.gene32893 | 0.815473 | 9.08E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene32893 | 0.854193 | 1.45E-61 | -1.69E-46 |
| MS.gene053272 | MS.gene32893 | -0.829786 | 4.24E-55 | -1.69E-46 |
| MS.gene053900 | MS.gene32893 | 0.83203 | 1.19E-55 | -1.69E-46 |
| MS.gene053995 | MS.gene32893 | 0.823364 | 1.44E-53 | -1.69E-46 |
| MS.gene054142 | MS.gene32893 | 0.808259 | 3.38E-50 | -1.69E-46 |
| MS.gene05423 | MS.gene32893 | 0.801917 | 7.18E-49 | -1.69E-46 |
| MS.gene054582 | MS.gene32893 | 0.821628 | 3.65E-53 | -1.69E-46 |
| MS.gene05458 | MS.gene32893 | 0.813601 | 2.36E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene32893 | 0.889687 | 1.94E-73 | -1.69E-46 |
| MS.gene055374 | MS.gene32893 | 0.856048 | 4.19E-62 | -1.69E-46 |
| MS.gene055513 | MS.gene32893 | 0.802869 | 4.57E-49 | -1.69E-46 |
| MS.gene055555 | MS.gene32893 | 0.811483 | 6.84E-51 | -1.69E-46 |
| MS.gene055586 | MS.gene32893 | 0.820956 | 5.21E-53 | -1.69E-46 |
| MS.gene055589 | MS.gene32893 | 0.823525 | 1.32E-53 | -1.69E-46 |
| MS.gene055818 | MS.gene32893 | 0.835578 | 1.55E-56 | -1.69E-46 |
| MS.gene056050 | MS.gene32893 | 0.800255 | 1.57E-48 | -1.69E-46 |
| MS.gene056366 | MS.gene32893 | 0.820222 | 7.69E-53 | -1.69E-46 |
| MS.gene056595 | MS.gene32893 | 0.817335 | 3.48E-52 | -1.69E-46 |
| MS.gene056699 | MS.gene32893 | 0.827898 | 1.21E-54 | -1.69E-46 |
| MS.gene056854 | MS.gene32893 | 0.8223 | 2.55E-53 | -1.69E-46 |
| MS.gene05686 | MS.gene32893 | 0.848623 | 5.45E-60 | -1.69E-46 |
| MS.gene05690 | MS.gene32893 | 0.820767 | 5.76E-53 | -1.69E-46 |
| MS.gene057102 | MS.gene32893 | 0.881748 | 1.85E-70 | -1.69E-46 |
| MS.gene057208 | MS.gene32893 | 0.833458 | 5.27E-56 | -1.69E-46 |
| MS.gene058008 | MS.gene32893 | 0.840909 | 6.54E-58 | -1.69E-46 |
| MS.gene058009 | MS.gene32893 | 0.835488 | 1.63E-56 | -1.69E-46 |
| MS.gene058037 | MS.gene32893 | 0.847025 | 1.50E-59 | -1.69E-46 |
| MS.gene058625 | MS.gene32893 | 0.856708 | 2.68E-62 | -1.69E-46 |
| MS.gene058781 | MS.gene32893 | 0.83589 | 1.29E-56 | -1.69E-46 |
| MS.gene058783 | MS.gene32893 | 0.875087 | 4.06E-68 | -1.69E-46 |
| MS.gene058979 | MS.gene32893 | 0.803214 | 3.88E-49 | -1.69E-46 |
| MS.gene059015 | MS.gene32893 | 0.812837 | 3.47E-51 | -1.69E-46 |
| MS.gene059625 | MS.gene32893 | 0.808152 | 3.56E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene32893 | 0.807111 | 5.93E-50 | -1.69E-46 |
| MS.gene05985 | MS.gene32893 | -0.853681 | 2.03E-61 | -1.69E-46 |
| MS.gene059900 | MS.gene32893 | -0.824059 | 9.91E-54 | -1.69E-46 |
| MS.gene059935 | MS.gene32893 | 0.821189 | 4.61E-53 | -1.69E-46 |
| MS.gene060338 | MS.gene32893 | 0.821074 | 4.90E-53 | -1.69E-46 |
| MS.gene060352 | MS.gene32893 | 0.832224 | 1.07E-55 | -1.69E-46 |
| MS.gene060525 | MS.gene32893 | 0.805066 | 1.60E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene32893 | 0.86771 | 1.12E-65 | -1.69E-46 |
| MS.gene060937 | MS.gene32893 | 0.849455 | 3.20E-60 | -1.69E-46 |
| MS.gene061188 | MS.gene32893 | 0.835641 | 1.49E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32893.t1 | MTR_3g102840 | 98.997 | 299 | 3 | 0 | 1 | 299 | 1 | 299 | 0.0 | 598 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32893.t1 | AT5G43130 | 63.636 | 341 | 108 | 5 | 2 | 339 | 494 | 821 | 3.52e-130 | 392 |
| MS.gene32893.t1 | AT5G43130 | 59.836 | 366 | 110 | 6 | 2 | 339 | 494 | 850 | 1.53e-125 | 380 |
| MS.gene32893.t1 | AT5G43130 | 65.972 | 288 | 86 | 4 | 2 | 286 | 494 | 772 | 7.54e-110 | 338 |
| MS.gene32893.t1 | AT1G27720 | 52.890 | 346 | 111 | 8 | 4 | 346 | 360 | 656 | 2.05e-94 | 295 |
| MS.gene32893.t1 | AT1G27720 | 52.890 | 346 | 111 | 8 | 4 | 346 | 365 | 661 | 2.49e-94 | 295 |
| MS.gene32893.t1 | AT1G27720 | 52.890 | 346 | 111 | 8 | 4 | 346 | 365 | 661 | 2.49e-94 | 295 |
| MS.gene32893.t1 | AT1G27720 | 52.738 | 347 | 112 | 8 | 4 | 347 | 383 | 680 | 4.31e-94 | 294 |
| MS.gene32893.t1 | AT1G27720 | 52.738 | 347 | 112 | 8 | 4 | 347 | 423 | 720 | 5.66e-94 | 295 |
| MS.gene32893.t1 | AT1G27720 | 52.738 | 347 | 112 | 8 | 4 | 347 | 408 | 705 | 1.03e-93 | 294 |
| MS.gene32893.t1 | AT1G27720 | 57.619 | 210 | 74 | 4 | 4 | 210 | 365 | 562 | 1.36e-66 | 219 |
| MS.gene32893.t1 | AT1G27720 | 57.619 | 210 | 74 | 4 | 4 | 210 | 365 | 562 | 1.36e-66 | 219 |
| MS.gene32893.t1 | AT1G27720 | 57.619 | 210 | 74 | 4 | 4 | 210 | 408 | 605 | 4.18e-66 | 219 |
Find 85 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAACAGCGGCTAGGAAATT+TGG | 0.161653 | 3.3:-84924811 | MS.gene32893:intron |
| CTGTTAGTGGTGTTGATCTT+AGG | 0.200282 | 3.3:-84927433 | MS.gene32893:CDS |
| TCAGACTTTCCTCCTCTTCT+TGG | 0.210744 | 3.3:+84927244 | None:intergenic |
| AACCCACATCATTTAGTTTC+CGG | 0.293138 | 3.3:+84926656 | None:intergenic |
| GTGCCTCAAGTGGTTTCTTC+TGG | 0.299881 | 3.3:+84927638 | None:intergenic |
| TCGATACAAGAGTGATGATT+TGG | 0.350173 | 3.3:+84924696 | None:intergenic |
| CAACAGCGGCTAGGAAATTT+GGG | 0.376940 | 3.3:-84924810 | MS.gene32893:intron |
| TTTGTGCTCCTTCCTGATGA+TGG | 0.388806 | 3.3:+84926130 | None:intergenic |
| GTAATGCATTGTAGGTGAAC+AGG | 0.394225 | 3.3:-84926333 | MS.gene32893:intron |
| TGAAACTCGACTGTCATCCT+TGG | 0.401173 | 3.3:+84927287 | None:intergenic |
| TGGCAGCCCGAGCTGCTGTT+GGG | 0.426995 | 3.3:-84926273 | MS.gene32893:CDS |
| GAAACAAAAGGTGTCATCTC+TGG | 0.429956 | 3.3:-84927489 | MS.gene32893:CDS |
| TGTTAGTGGTGTTGATCTTA+GGG | 0.434851 | 3.3:-84927432 | MS.gene32893:intron |
| CATAATTAGAATGTCAAAAC+AGG | 0.436843 | 3.3:-84926887 | MS.gene32893:intron |
| AATTGATGGCTGAGCAAGCC+AGG | 0.445191 | 3.3:-84926225 | MS.gene32893:CDS |
| CCTGAGTTCCCAAGCGAAGT+TGG | 0.451526 | 3.3:+84926079 | None:intergenic |
| CGCAAATCTTCACCATCATC+AGG | 0.452328 | 3.3:-84926142 | MS.gene32893:CDS |
| AATGATGTTACGGCTGTTAG+TGG | 0.455727 | 3.3:-84927446 | MS.gene32893:CDS |
| GTATAGGTAGAGGGTAGTTC+CGG | 0.456726 | 3.3:-84926469 | MS.gene32893:intron |
| AGAAAAGGTCCAACTTCGCT+TGG | 0.461318 | 3.3:-84926088 | MS.gene32893:CDS |
| AAGCCAGGCAGAAGCGTGAA+GGG | 0.465558 | 3.3:-84926210 | MS.gene32893:CDS |
| AGCAAATCATGACAATGAAT+AGG | 0.467989 | 3.3:-84926726 | MS.gene32893:CDS |
| TAGGAAAGCAAGGGAAGAGT+GGG | 0.469487 | 3.3:-84926707 | MS.gene32893:CDS |
| TGATCAGCTTAATGATGTTA+CGG | 0.473692 | 3.3:-84927456 | MS.gene32893:CDS |
| CACAAAAGATAATCAAGAAA+AGG | 0.477074 | 3.3:-84926113 | MS.gene32893:CDS |
| GAAACTCGACTGTCATCCTT+GGG | 0.480685 | 3.3:+84927288 | None:intergenic |
| GTTCTTCCCCTCCTCCTCCA+AGG | 0.485579 | 3.3:-84927612 | MS.gene32893:intron |
| GTGGCAGCCCGAGCTGCTGT+TGG | 0.487103 | 3.3:-84926274 | MS.gene32893:CDS |
| AATCAAGAAAAGGAGAGAAA+AGG | 0.491500 | 3.3:-84926103 | MS.gene32893:CDS |
| GAGGGTAGTTCCGGAGTTGA+TGG | 0.505527 | 3.3:-84926460 | MS.gene32893:CDS |
| GAAGGATGTAATTGCAGTCT+TGG | 0.506286 | 3.3:-84924737 | MS.gene32893:CDS |
| CTCCTTGTCACCATCAACTC+CGG | 0.506910 | 3.3:+84926450 | None:intergenic |
| ATGACTCACCTTGGAGGAGG+AGG | 0.509496 | 3.3:+84927604 | None:intergenic |
| GCCAGGCAGAAGCGTGAAGG+GGG | 0.513828 | 3.3:-84926208 | MS.gene32893:CDS |
| GCTGTCAAAGTGGCAATTGA+TGG | 0.514119 | 3.3:-84926239 | MS.gene32893:CDS |
| ATAGGAAAGCAAGGGAAGAG+TGG | 0.515038 | 3.3:-84926708 | MS.gene32893:CDS |
| ATCCTACAGTAAGAAACAAA+AGG | 0.523762 | 3.3:-84927501 | MS.gene32893:intron |
| GAAAAGGTCCAACTTCGCTT+GGG | 0.524007 | 3.3:-84926087 | MS.gene32893:CDS |
| CAAGCCAGGCAGAAGCGTGA+AGG | 0.525670 | 3.3:-84926211 | MS.gene32893:CDS |
| TCATTAAGCTGATCAATGCT+TGG | 0.527111 | 3.3:+84927464 | None:intergenic |
| CCAACTTCGCTTGGGAACTC+AGG | 0.532682 | 3.3:-84926079 | MS.gene32893:intron |
| GTGACCGAGTGTGGCTTGAA+AGG | 0.539175 | 3.3:-84927056 | MS.gene32893:CDS |
| GGCAGCCCGAGCTGCTGTTG+GGG | 0.539687 | 3.3:-84926272 | MS.gene32893:CDS |
| AAGAAACCACTTGAGGCACT+TGG | 0.542539 | 3.3:-84927634 | MS.gene32893:CDS |
| AGGCTGAAACAGAAAAGCTC+CGG | 0.543349 | 3.3:-84926675 | MS.gene32893:CDS |
| TCTGATACTCCAACCGAATG+AGG | 0.551257 | 3.3:-84924655 | None:intergenic |
| TGACAATGAATAGGAAAGCA+AGG | 0.552373 | 3.3:-84926717 | MS.gene32893:CDS |
| AGCCAGGCAGAAGCGTGAAG+GGG | 0.558774 | 3.3:-84926209 | MS.gene32893:CDS |
| GACTCACCTTGGAGGAGGAG+GGG | 0.560269 | 3.3:+84927606 | None:intergenic |
| TGCTCGTAGCATCTCTGTGA+AGG | 0.565213 | 3.3:-84924755 | MS.gene32893:CDS |
| AATACTATGACTCACCTTGG+AGG | 0.566673 | 3.3:+84927598 | None:intergenic |
| GAGTGTGGCTTGAAAGGCAT+GGG | 0.570129 | 3.3:-84927050 | MS.gene32893:CDS |
| TGACTCACCTTGGAGGAGGA+GGG | 0.573210 | 3.3:+84927605 | None:intergenic |
| TCTTGTTGCCAACAGCGGCT+AGG | 0.582888 | 3.3:-84924819 | MS.gene32893:intron |
| GCAGCCCGAGCTGCTGTTGG+GGG | 0.585228 | 3.3:-84926271 | MS.gene32893:CDS |
| GGGAAGTAGATGACAAAATG+AGG | 0.590649 | 3.3:-84926312 | MS.gene32893:CDS |
| CATGCCTTTCAAGCCACACT+CGG | 0.591412 | 3.3:+84927052 | None:intergenic |
| AAGAGTTGTCCAAGAAGAGG+AGG | 0.596851 | 3.3:-84927253 | MS.gene32893:CDS |
| GGTTTCTTCTGGCCAAGAGG+AGG | 0.597345 | 3.3:+84927649 | None:intergenic |
| TCGAAGAGTTGTCCAAGAAG+AGG | 0.598509 | 3.3:-84927256 | MS.gene32893:CDS |
| ACTATGACTCACCTTGGAGG+AGG | 0.599837 | 3.3:+84927601 | None:intergenic |
| AGTGATGATTTGGACATCTG+AGG | 0.600102 | 3.3:+84924706 | None:intergenic |
| ATGTAATTGCAGTCTTGGAG+AGG | 0.600412 | 3.3:-84924732 | MS.gene32893:CDS |
| TGTGGAAAGATGCTTGTCAC+TGG | 0.604950 | 3.3:-84927021 | MS.gene32893:intron |
| GACAATGAATAGGAAAGCAA+GGG | 0.612242 | 3.3:-84926716 | MS.gene32893:CDS |
| GAGGACAAATGCTGCAAATG+TGG | 0.613322 | 3.3:-84926293 | MS.gene32893:CDS |
| TAATGCATTGTAGGTGAACA+GGG | 0.617187 | 3.3:-84926332 | MS.gene32893:intron |
| TCTTGTATCGAATGCATGAG+AGG | 0.620488 | 3.3:-84924684 | MS.gene32893:CDS |
| TGTAATTGCAGTCTTGGAGA+GGG | 0.622189 | 3.3:-84924731 | MS.gene32893:CDS |
| AGTGGTTTCTTCTGGCCAAG+AGG | 0.622436 | 3.3:+84927646 | None:intergenic |
| TTCCGGAGTTGATGGTGACA+AGG | 0.629596 | 3.3:-84926452 | MS.gene32893:CDS |
| GGTGACAAGGAGAAAGATGA+GGG | 0.632650 | 3.3:-84926439 | MS.gene32893:CDS |
| GAGATGACATGCTGTCAAAG+TGG | 0.640207 | 3.3:-84926249 | MS.gene32893:CDS |
| TGGTGACAAGGAGAAAGATG+AGG | 0.641020 | 3.3:-84926440 | MS.gene32893:CDS |
| GGGTCGTAATAAAGCAACAA+AGG | 0.644402 | 3.3:-84926419 | MS.gene32893:intron |
| CCAGGCAGAAGCGTGAAGGG+GGG | 0.644805 | 3.3:-84926207 | MS.gene32893:CDS |
| AATCTTCACCATCATCAGGA+AGG | 0.645878 | 3.3:-84926138 | MS.gene32893:CDS |
| CGAGTGTGGCTTGAAAGGCA+TGG | 0.656819 | 3.3:-84927051 | MS.gene32893:CDS |
| GAAGAACCAAGTGCCTCAAG+TGG | 0.657729 | 3.3:+84927628 | None:intergenic |
| GAAAGGCATGGGTAATGATG+TGG | 0.658786 | 3.3:-84927039 | MS.gene32893:CDS |
| ATGTTGGCAGTGACCGAGTG+TGG | 0.669170 | 3.3:-84927065 | MS.gene32893:intron |
| TGGCCAGAAGAAACCACTTG+AGG | 0.672577 | 3.3:-84927641 | MS.gene32893:CDS |
| AATTAATGTTCAGTGTGTGG+AGG | 0.687983 | 3.3:-84926935 | MS.gene32893:intron |
| TGTGTGGAGGAAAGAATGCG+TGG | 0.701022 | 3.3:-84926922 | MS.gene32893:CDS |
| ATATTGAGAAAACAAGACAT+CGG | 0.724469 | 3.3:-84926774 | MS.gene32893:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATAAATAACTAAATG+TGG | - | chr3.3:84927223-84927242 | MS.gene32893:CDS | 10.0% |
| !! | AAATTTACAAATTGACATAA+AGG | + | chr3.3:84925502-84925521 | None:intergenic | 15.0% |
| !! | ACTTACTAAATTTGAATATT+AGG | + | chr3.3:84926437-84926456 | None:intergenic | 15.0% |
| !! | TGTAACAAATATTGAAATAT+GGG | + | chr3.3:84925345-84925364 | None:intergenic | 15.0% |
| !! | TTGTAACAAATATTGAAATA+TGG | + | chr3.3:84925346-84925365 | None:intergenic | 15.0% |
| !! | AAAAAATTGAGGAAGAAAAT+TGG | - | chr3.3:84927130-84927149 | MS.gene32893:intron | 20.0% |
| !! | AAACTGTTGTTAAACAAAAA+AGG | + | chr3.3:84927262-84927281 | None:intergenic | 20.0% |
| !! | ACAAAAATTAAATTCCACAA+AGG | + | chr3.3:84925710-84925729 | None:intergenic | 20.0% |
| !! | CAAAAATTAAATTCCACAAA+GGG | + | chr3.3:84925709-84925728 | None:intergenic | 20.0% |
| !! | TAAGTTAGTTCAATATATAC+TGG | + | chr3.3:84926575-84926594 | None:intergenic | 20.0% |
| !!! | AACTAACTTATAAGTTGTTT+TGG | - | chr3.3:84926585-84926604 | MS.gene32893:intron | 20.0% |
| !!! | CTTGTTCATTTTTTTTTTCT+GGG | - | chr3.3:84924758-84924777 | MS.gene32893:CDS | 20.0% |
| !!! | CTTTTCTGTTTTAAAATTTC+AGG | - | chr3.3:84924967-84924986 | MS.gene32893:intron | 20.0% |
| !!! | GGAATTTAATTTTTGTATAG+TGG | - | chr3.3:84925714-84925733 | MS.gene32893:intron | 20.0% |
| !!! | TAATGCTATTTTTTGAGTAT+AGG | - | chr3.3:84925845-84925864 | MS.gene32893:intron | 20.0% |
| !!! | TTTCAATATTTGTTACAAGT+AGG | - | chr3.3:84925348-84925367 | MS.gene32893:intron | 20.0% |
| !!! | TTTTTGTGTTCTCTTTTTAT+AGG | - | chr3.3:84924993-84925012 | MS.gene32893:intron | 20.0% |
| ! | AACTTATCTAGATATGTACT+TGG | - | chr3.3:84925208-84925227 | MS.gene32893:intron | 25.0% |
| ! | AATTGCAAAATAGATTCTTG+AGG | - | chr3.3:84927104-84927123 | MS.gene32893:intron | 25.0% |
| ! | ACTTATCTAGATATGTACTT+GGG | - | chr3.3:84925209-84925228 | MS.gene32893:intron | 25.0% |
| ! | ATATTGAAGAAAACCATAGT+TGG | - | chr3.3:84924935-84924954 | MS.gene32893:intron | 25.0% |
| ! | ATATTGAGAAAACAAGACAT+CGG | - | chr3.3:84925556-84925575 | MS.gene32893:intron | 25.0% |
| ! | ATCTAGATAAGTTTGAAGAA+TGG | + | chr3.3:84925201-84925220 | None:intergenic | 25.0% |
| ! | ATGACTTTCCACATATATAA+AGG | + | chr3.3:84925967-84925986 | None:intergenic | 25.0% |
| ! | CACAAAAGATAATCAAGAAA+AGG | - | chr3.3:84926217-84926236 | MS.gene32893:CDS | 25.0% |
| ! | CATAATTAGAATGTCAAAAC+AGG | - | chr3.3:84925443-84925462 | MS.gene32893:intron | 25.0% |
| ! | GTGATGATCAATTGTATAAA+TGG | - | chr3.3:84927157-84927176 | MS.gene32893:intron | 25.0% |
| ! | GTGCTGTGATATTTATAATA+GGG | + | chr3.3:84926839-84926858 | None:intergenic | 25.0% |
| ! | TATATTCAAACTAGTTAGTC+AGG | - | chr3.3:84926348-84926367 | MS.gene32893:intron | 25.0% |
| ! | TATTGAAGAAAACCATAGTT+GGG | - | chr3.3:84924936-84924955 | MS.gene32893:intron | 25.0% |
| ! | TGTGCTGTGATATTTATAAT+AGG | + | chr3.3:84926840-84926859 | None:intergenic | 25.0% |
| !! | AAGACTTTTTATGCATGTTT+AGG | + | chr3.3:84927364-84927383 | None:intergenic | 25.0% |
| !!! | ATTTTTTGAGTATAGGTAGA+GGG | - | chr3.3:84925852-84925871 | MS.gene32893:intron | 25.0% |
| !!! | CAATATATACTGGTTGATTT+TGG | + | chr3.3:84926565-84926584 | None:intergenic | 25.0% |
| !!! | CTTTTTTAAACACTTGCATT+CGG | - | chr3.3:84926954-84926973 | MS.gene32893:intron | 25.0% |
| !!! | GCTCTTGTTAATATGTTTTT+TGG | - | chr3.3:84927191-84927210 | MS.gene32893:intron | 25.0% |
| !!! | GCTTGTTCATTTTTTTTTTC+TGG | - | chr3.3:84924757-84924776 | MS.gene32893:CDS | 25.0% |
| !!! | GTTTTAAATGATAAGCACAT+AGG | + | chr3.3:84925821-84925840 | None:intergenic | 25.0% |
| !!! | TATTTTTTGAGTATAGGTAG+AGG | - | chr3.3:84925851-84925870 | MS.gene32893:intron | 25.0% |
| !!! | TTTTATTGGTAATGCATTGT+AGG | - | chr3.3:84925989-84926008 | MS.gene32893:intron | 25.0% |
| AACAGCTATAAGGTTTACAT+AGG | + | chr3.3:84925235-84925254 | None:intergenic | 30.0% | |
| AATAAAACTTTATAGCCCCA+TGG | - | chr3.3:84927403-84927422 | MS.gene32893:intron | 30.0% | |
| AATCAAGAAAAGGAGAGAAA+AGG | - | chr3.3:84926227-84926246 | MS.gene32893:CDS | 30.0% | |
| AGCAAATCATGACAATGAAT+AGG | - | chr3.3:84925604-84925623 | MS.gene32893:intron | 30.0% | |
| ATCCTACAGTAAGAAACAAA+AGG | - | chr3.3:84924829-84924848 | MS.gene32893:intron | 30.0% | |
| ATGGCAAAAACAAAATCAGA+TGG | + | chr3.3:84925182-84925201 | None:intergenic | 30.0% | |
| CACACATATTGTATTGTATC+TGG | + | chr3.3:84927432-84927451 | None:intergenic | 30.0% | |
| CAGAAAAGAAAAAACAACAC+TGG | - | chr3.3:84926684-84926703 | MS.gene32893:CDS | 30.0% | |
| GAAAATTAATGTTCAGTGTG+TGG | - | chr3.3:84925392-84925411 | MS.gene32893:intron | 30.0% | |
| GACAAAATACAACAGCTATA+AGG | + | chr3.3:84925245-84925264 | None:intergenic | 30.0% | |
| GACAGAGTAATGACATAAAT+AGG | + | chr3.3:84925160-84925179 | None:intergenic | 30.0% | |
| GCAATTCACCTTTATATATG+TGG | - | chr3.3:84925956-84925975 | MS.gene32893:intron | 30.0% | |
| TAGGATTCCATGTAATCTAA+CGG | - | chr3.3:84925367-84925386 | MS.gene32893:intron | 30.0% | |
| TGATCAGCTTAATGATGTTA+CGG | - | chr3.3:84924874-84924893 | MS.gene32893:intron | 30.0% | |
| TTTGGGAAAAATCATTCTCA+TGG | - | chr3.3:84927537-84927556 | MS.gene32893:intron | 30.0% | |
| ! | TCAATCAATTTTCTCTGCAA+TGG | + | chr3.3:84925126-84925145 | None:intergenic | 30.0% |
| ! | TTGTGTTCTCTTTTTATAGG+AGG | - | chr3.3:84924996-84925015 | MS.gene32893:intron | 30.0% |
| !! | AGGAAGAACAGTTATTTTCT+GGG | - | chr3.3:84925019-84925038 | MS.gene32893:intron | 30.0% |
| !! | GTGGAAAGTCATGTTTTTAT+TGG | - | chr3.3:84925975-84925994 | MS.gene32893:intron | 30.0% |
| !!! | AATATGTTTTTTGGCTCAAG+TGG | - | chr3.3:84927200-84927219 | MS.gene32893:intron | 30.0% |
| AAAGTATGTGTTCCCAACTA+TGG | + | chr3.3:84924951-84924970 | None:intergenic | 35.0% | |
| AATTAATGTTCAGTGTGTGG+AGG | - | chr3.3:84925395-84925414 | MS.gene32893:intron | 35.0% | |
| AATTCCACAAAGGGACAAAA+TGG | + | chr3.3:84925700-84925719 | None:intergenic | 35.0% | |
| ACAATGTAATCAGAACATGG+GGG | + | chr3.3:84927459-84927478 | None:intergenic | 35.0% | |
| ACACTTTCCTTGCATAAAAG+CGG | - | chr3.3:84926480-84926499 | MS.gene32893:intron | 35.0% | |
| CAAAATACTATGACTCACCT+TGG | + | chr3.3:84924738-84924757 | None:intergenic | 35.0% | |
| CACAATGTAATCAGAACATG+GGG | + | chr3.3:84927460-84927479 | None:intergenic | 35.0% | |
| GACAATGAATAGGAAAGCAA+GGG | - | chr3.3:84925614-84925633 | MS.gene32893:intron | 35.0% | |
| GCACAATGTAATCAGAACAT+GGG | + | chr3.3:84927461-84927480 | None:intergenic | 35.0% | |
| TAATGCATTGTAGGTGAACA+GGG | - | chr3.3:84925998-84926017 | MS.gene32893:intron | 35.0% | |
| TCATTAAGCTGATCAATGCT+TGG | + | chr3.3:84924869-84924888 | None:intergenic | 35.0% | |
| TCGATACAAGAGTGATGATT+TGG | + | chr3.3:84927637-84927656 | None:intergenic | 35.0% | |
| TCTTGAGGCAGAAAAAATTG+AGG | - | chr3.3:84927119-84927138 | MS.gene32893:intron | 35.0% | |
| TGACAATGAATAGGAAAGCA+AGG | - | chr3.3:84925613-84925632 | MS.gene32893:intron | 35.0% | |
| TGCACAATGTAATCAGAACA+TGG | + | chr3.3:84927462-84927481 | None:intergenic | 35.0% | |
| TTTGTCCTTGCACATTTCTT+GGG | - | chr3.3:84925753-84925772 | MS.gene32893:intron | 35.0% | |
| ! | AACCCACATCATTTAGTTTC+CGG | + | chr3.3:84925677-84925696 | None:intergenic | 35.0% |
| ! | CAGCACAGTACTGAAAATAT+TGG | - | chr3.3:84926853-84926872 | MS.gene32893:intron | 35.0% |
| ! | GCTGTTGTATTTTGTCATGT+TGG | - | chr3.3:84925249-84925268 | MS.gene32893:intron | 35.0% |
| ! | TGTTCTCTTTTTATAGGAGG+AGG | - | chr3.3:84924999-84925018 | MS.gene32893:intron | 35.0% |
| ! | TTTTCAGCCGTTAGATTACA+TGG | + | chr3.3:84925377-84925396 | None:intergenic | 35.0% |
| ! | TTTTGTCCTTGCACATTTCT+TGG | - | chr3.3:84925752-84925771 | MS.gene32893:intron | 35.0% |
| !! | CACCTTTTGTTTCTTACTGT+AGG | + | chr3.3:84924834-84924853 | None:intergenic | 35.0% |
| !! | GAGGAAGAACAGTTATTTTC+TGG | - | chr3.3:84925018-84925037 | MS.gene32893:intron | 35.0% |
| !! | TGTTAGTGGTGTTGATCTTA+GGG | - | chr3.3:84924898-84924917 | MS.gene32893:intron | 35.0% |
| AATAAAAACAAACCCCCTGC+TGG | + | chr3.3:84927067-84927086 | None:intergenic | 40.0% | |
| AATACTATGACTCACCTTGG+AGG | + | chr3.3:84924735-84924754 | None:intergenic | 40.0% | |
| AATCTTCACCATCATCAGGA+AGG | - | chr3.3:84926192-84926211 | MS.gene32893:CDS | 40.0% | |
| AATGATGTTACGGCTGTTAG+TGG | - | chr3.3:84924884-84924903 | MS.gene32893:intron | 40.0% | |
| ACCAAAGTCTGAATGAGACT+AGG | - | chr3.3:84926511-84926530 | MS.gene32893:intron | 40.0% | |
| ACTCCAGACAATTTGATCAC+AGG | + | chr3.3:84927318-84927337 | None:intergenic | 40.0% | |
| ATGTAATTGCAGTCTTGGAG+AGG | - | chr3.3:84927598-84927617 | MS.gene32893:intron | 40.0% | |
| CCACTAAAAAAACCTCCTCT+TGG | - | chr3.3:84924669-84924688 | MS.gene32893:CDS | 40.0% | |
| CTCCAGACAATTTGATCACA+GGG | + | chr3.3:84927317-84927336 | None:intergenic | 40.0% | |
| CTCCGGAAACTAAATGATGT+GGG | - | chr3.3:84925672-84925691 | MS.gene32893:intron | 40.0% | |
| GAAGGATGTAATTGCAGTCT+TGG | - | chr3.3:84927593-84927612 | MS.gene32893:intron | 40.0% | |
| GCAGCTGTCTACAAATTCAA+TGG | - | chr3.3:84926305-84926324 | MS.gene32893:CDS | 40.0% | |
| GGGAAGTAGATGACAAAATG+AGG | - | chr3.3:84926018-84926037 | MS.gene32893:intron | 40.0% | |
| GGGTCGTAATAAAGCAACAA+AGG | - | chr3.3:84925911-84925930 | MS.gene32893:intron | 40.0% | |
| GTAATGCATTGTAGGTGAAC+AGG | - | chr3.3:84925997-84926016 | MS.gene32893:intron | 40.0% | |
| GTATTGTATCTGGAGACCAT+GGG | + | chr3.3:84927422-84927441 | None:intergenic | 40.0% | |
| TACAGCTAATTACTTCCGAC+TGG | + | chr3.3:84926902-84926921 | None:intergenic | 40.0% | |
| TATTGTATCTGGAGACCATG+GGG | + | chr3.3:84927421-84927440 | None:intergenic | 40.0% | |
| TCCTAGTCTCATTCAGACTT+TGG | + | chr3.3:84926515-84926534 | None:intergenic | 40.0% | |
| TCTTGTATCGAATGCATGAG+AGG | - | chr3.3:84927646-84927665 | MS.gene32893:CDS | 40.0% | |
| TGTAATTGCAGTCTTGGAGA+GGG | - | chr3.3:84927599-84927618 | MS.gene32893:intron | 40.0% | |
| TGTATTGTATCTGGAGACCA+TGG | + | chr3.3:84927423-84927442 | None:intergenic | 40.0% | |
| TTCCCTGTGATCAAATTGTC+TGG | - | chr3.3:84927312-84927331 | MS.gene32893:CDS | 40.0% | |
| ! | AACTCAGGTGCGTTTCTTTT+TGG | - | chr3.3:84926266-84926285 | MS.gene32893:CDS | 40.0% |
| ! | AGTGATGATTTGGACATCTG+AGG | + | chr3.3:84927627-84927646 | None:intergenic | 40.0% |
| ! | GCTTTTATGCAAGGAAAGTG+TGG | + | chr3.3:84926481-84926500 | None:intergenic | 40.0% |
| ! | TCCGATAATTTTCCTACCAG+CGG | - | chr3.3:84925529-84925548 | MS.gene32893:intron | 40.0% |
| ! | TTTTCTCAATATCAACCCGC+TGG | + | chr3.3:84925548-84925567 | None:intergenic | 40.0% |
| ! | TTTTGCACCGCAGATTCAAA+CGG | - | chr3.3:84925794-84925813 | MS.gene32893:intron | 40.0% |
| !! | CTGTTAGTGGTGTTGATCTT+AGG | - | chr3.3:84924897-84924916 | MS.gene32893:intron | 40.0% |
| !! | GAAACAAAAGGTGTCATCTC+TGG | - | chr3.3:84924841-84924860 | MS.gene32893:intron | 40.0% |
| !! | TACTGGTTGATTTTGGACGA+AGG | + | chr3.3:84926558-84926577 | None:intergenic | 40.0% |
| !! | TGCTTTACCGCTTTTATGCA+AGG | + | chr3.3:84926490-84926509 | None:intergenic | 40.0% |
| !! | TGGTTGATTTTGGATGAAGG+CGG | - | chr3.3:84926615-84926634 | MS.gene32893:intron | 40.0% |
| !!! | CCAAGAGGAGGTTTTTTTAG+TGG | + | chr3.3:84924672-84924691 | None:intergenic | 40.0% |
| AAGAGTTGTCCAAGAAGAGG+AGG | - | chr3.3:84925077-84925096 | MS.gene32893:intron | 45.0% | |
| AGAAAAGGTCCAACTTCGCT+TGG | - | chr3.3:84926242-84926261 | MS.gene32893:CDS | 45.0% | |
| AGGCTGAAACAGAAAAGCTC+CGG | - | chr3.3:84925655-84925674 | MS.gene32893:intron | 45.0% | |
| AGTCTGAATGAGACTAGGAG+AGG | - | chr3.3:84926516-84926535 | MS.gene32893:intron | 45.0% | |
| ATAGGAAAGCAAGGGAAGAG+TGG | - | chr3.3:84925622-84925641 | MS.gene32893:intron | 45.0% | |
| ATATCACACATGTGCCAGCA+GGG | - | chr3.3:84927050-84927069 | MS.gene32893:CDS | 45.0% | |
| CAACAGCGGCTAGGAAATTT+GGG | - | chr3.3:84927520-84927539 | MS.gene32893:intron | 45.0% | |
| CATAGGTCCGTTTGAATCTG+CGG | + | chr3.3:84925804-84925823 | None:intergenic | 45.0% | |
| CCCGCTGGTAGGAAAATTAT+CGG | + | chr3.3:84925533-84925552 | None:intergenic | 45.0% | |
| CGCAAATCTTCACCATCATC+AGG | - | chr3.3:84926188-84926207 | MS.gene32893:CDS | 45.0% | |
| CTGTTGGCAACAAGAACACA+GGG | + | chr3.3:84927506-84927525 | None:intergenic | 45.0% | |
| GAAAAGGTCCAACTTCGCTT+GGG | - | chr3.3:84926243-84926262 | MS.gene32893:CDS | 45.0% | |
| GAAACTCGACTGTCATCCTT+GGG | + | chr3.3:84925045-84925064 | None:intergenic | 45.0% | |
| GAGATGACATGCTGTCAAAG+TGG | - | chr3.3:84926081-84926100 | MS.gene32893:CDS | 45.0% | |
| GAGGACAAATGCTGCAAATG+TGG | - | chr3.3:84926037-84926056 | MS.gene32893:intron | 45.0% | |
| GCTCCGGAAACTAAATGATG+TGG | - | chr3.3:84925671-84925690 | MS.gene32893:intron | 45.0% | |
| GCTGTCAAAGTGGCAATTGA+TGG | - | chr3.3:84926091-84926110 | MS.gene32893:CDS | 45.0% | |
| GGAAGAGTGGGAGAAAAAAC+AGG | - | chr3.3:84925635-84925654 | MS.gene32893:intron | 45.0% | |
| GGTGACAAGGAGAAAGATGA+GGG | - | chr3.3:84925891-84925910 | MS.gene32893:intron | 45.0% | |
| GTATAGGTAGAGGGTAGTTC+CGG | - | chr3.3:84925861-84925880 | MS.gene32893:intron | 45.0% | |
| TAGGAAAGCAAGGGAAGAGT+GGG | - | chr3.3:84925623-84925642 | MS.gene32893:intron | 45.0% | |
| TAGGAAGTTGGGCTCACTAA+TGG | - | chr3.3:84926657-84926676 | MS.gene32893:intron | 45.0% | |
| TCAGACTTTCCTCCTCTTCT+TGG | + | chr3.3:84925089-84925108 | None:intergenic | 45.0% | |
| TCGAAGAGTTGTCCAAGAAG+AGG | - | chr3.3:84925074-84925093 | MS.gene32893:intron | 45.0% | |
| TGAAACTCGACTGTCATCCT+TGG | + | chr3.3:84925046-84925065 | None:intergenic | 45.0% | |
| TGGTGACAAGGAGAAAGATG+AGG | - | chr3.3:84925890-84925909 | MS.gene32893:intron | 45.0% | |
| TGTGGAAAGATGCTTGTCAC+TGG | - | chr3.3:84925309-84925328 | MS.gene32893:intron | 45.0% | |
| TGTGTTCTTGTTGCCAACAG+CGG | - | chr3.3:84927506-84927525 | MS.gene32893:intron | 45.0% | |
| TTTGTGCTCCTTCCTGATGA+TGG | + | chr3.3:84926203-84926222 | None:intergenic | 45.0% | |
| ! | AAGAAACCACTTGAGGCACT+TGG | - | chr3.3:84924696-84924715 | MS.gene32893:CDS | 45.0% |
| ! | CAGAAGCACAGAAATCCAGT+CGG | - | chr3.3:84926884-84926903 | MS.gene32893:intron | 45.0% |
| ! | CCGATAATTTTCCTACCAGC+GGG | - | chr3.3:84925530-84925549 | MS.gene32893:intron | 45.0% |
| ! | GAAAGGCATGGGTAATGATG+TGG | - | chr3.3:84925291-84925310 | MS.gene32893:intron | 45.0% |
| ! | GGTTCCATTTTGTCCCTTTG+TGG | - | chr3.3:84925693-84925712 | MS.gene32893:intron | 45.0% |
| !! | ACAGTTATTTTCTGGGCCCA+AGG | - | chr3.3:84925026-84925045 | MS.gene32893:intron | 45.0% |
| !! | CGCTGGTTGATTTTGGATGA+AGG | - | chr3.3:84926612-84926631 | MS.gene32893:intron | 45.0% |
| !! | GGTTGATTTTGGACGAAGGT+GGG | + | chr3.3:84926554-84926573 | None:intergenic | 45.0% |
| !! | GGTTGATTTTGGATGAAGGC+GGG | - | chr3.3:84926616-84926635 | MS.gene32893:intron | 45.0% |
| !! | TGGTTGATTTTGGACGAAGG+TGG | + | chr3.3:84926555-84926574 | None:intergenic | 45.0% |
| !!! | TAAGTTGTTTTGGAGCTCGC+TGG | - | chr3.3:84926595-84926614 | MS.gene32893:intron | 45.0% |
| ACTATGACTCACCTTGGAGG+AGG | + | chr3.3:84924732-84924751 | None:intergenic | 50.0% | |
| AGAAGCCAGGAGTAGGAAGT+TGG | - | chr3.3:84926645-84926664 | MS.gene32893:intron | 50.0% | |
| AGTGGTTTCTTCTGGCCAAG+AGG | + | chr3.3:84924687-84924706 | None:intergenic | 50.0% | |
| CATATCACACATGTGCCAGC+AGG | - | chr3.3:84927049-84927068 | MS.gene32893:CDS | 50.0% | |
| CATGCCTTTCAAGCCACACT+CGG | + | chr3.3:84925281-84925300 | None:intergenic | 50.0% | |
| CCAAATTTCCTAGCCGCTGT+TGG | + | chr3.3:84927522-84927541 | None:intergenic | 50.0% | |
| CCAACAGCGGCTAGGAAATT+TGG | - | chr3.3:84927519-84927538 | MS.gene32893:intron | 50.0% | |
| CTCAATATCAACCCGCTGGT+AGG | + | chr3.3:84925544-84925563 | None:intergenic | 50.0% | |
| CTCCTTGTCACCATCAACTC+CGG | + | chr3.3:84925883-84925902 | None:intergenic | 50.0% | |
| GAAGAACCAAGTGCCTCAAG+TGG | + | chr3.3:84924705-84924724 | None:intergenic | 50.0% | |
| GAAGCCAGGAGTAGGAAGTT+GGG | - | chr3.3:84926646-84926665 | MS.gene32893:intron | 50.0% | |
| GCATGCCCAAGAAATGTGCA+AGG | + | chr3.3:84925761-84925780 | None:intergenic | 50.0% | |
| GCTGTTGGCAACAAGAACAC+AGG | + | chr3.3:84927507-84927526 | None:intergenic | 50.0% | |
| GTGCCTCAAGTGGTTTCTTC+TGG | + | chr3.3:84924695-84924714 | None:intergenic | 50.0% | |
| TATCACACATGTGCCAGCAG+GGG | - | chr3.3:84927051-84927070 | MS.gene32893:CDS | 50.0% | |
| TGATCACAGGGAACACACGA+GGG | + | chr3.3:84927305-84927324 | None:intergenic | 50.0% | |
| TGCTCGTAGCATCTCTGTGA+AGG | - | chr3.3:84927575-84927594 | MS.gene32893:intron | 50.0% | |
| TGGCCAGAAGAAACCACTTG+AGG | - | chr3.3:84924689-84924708 | MS.gene32893:CDS | 50.0% | |
| TGTAGACAGCTGCAAGTAGC+AGG | + | chr3.3:84926298-84926317 | None:intergenic | 50.0% | |
| TGTGTGGAGGAAAGAATGCG+TGG | - | chr3.3:84925408-84925427 | MS.gene32893:intron | 50.0% | |
| TTGATCACAGGGAACACACG+AGG | + | chr3.3:84927306-84927325 | None:intergenic | 50.0% | |
| ! | AATTGATGGCTGAGCAAGCC+AGG | - | chr3.3:84926105-84926124 | MS.gene32893:CDS | 50.0% |
| ! | GAGTGTGGCTTGAAAGGCAT+GGG | - | chr3.3:84925280-84925299 | MS.gene32893:intron | 50.0% |
| !! | TGGAGCTCGCTGGTTGATTT+TGG | - | chr3.3:84926605-84926624 | MS.gene32893:intron | 50.0% |
| !! | TTCCGGAGTTGATGGTGACA+AGG | - | chr3.3:84925878-84925897 | MS.gene32893:intron | 50.0% |
| ATCACACATGTGCCAGCAGG+GGG | - | chr3.3:84927052-84927071 | MS.gene32893:CDS | 55.0% | |
| ATGACTCACCTTGGAGGAGG+AGG | + | chr3.3:84924729-84924748 | None:intergenic | 55.0% | |
| ATGTTGGCAGTGACCGAGTG+TGG | - | chr3.3:84925265-84925284 | MS.gene32893:intron | 55.0% | |
| CCAACTTCGCTTGGGAACTC+AGG | - | chr3.3:84926251-84926270 | MS.gene32893:CDS | 55.0% | |
| CCTGAGTTCCCAAGCGAAGT+TGG | + | chr3.3:84926254-84926273 | None:intergenic | 55.0% | |
| CGAGTGTGGCTTGAAAGGCA+TGG | - | chr3.3:84925279-84925298 | MS.gene32893:intron | 55.0% | |
| GAGGGTAGTTCCGGAGTTGA+TGG | - | chr3.3:84925870-84925889 | MS.gene32893:intron | 55.0% | |
| GCAGTAGAGAAGCCAGGAGT+AGG | - | chr3.3:84926638-84926657 | MS.gene32893:intron | 55.0% | |
| GGTTTCTTCTGGCCAAGAGG+AGG | + | chr3.3:84924684-84924703 | None:intergenic | 55.0% | |
| GTGACCGAGTGTGGCTTGAA+AGG | - | chr3.3:84925274-84925293 | MS.gene32893:intron | 55.0% | |
| TCTTGTTGCCAACAGCGGCT+AGG | - | chr3.3:84927511-84927530 | MS.gene32893:intron | 55.0% | |
| TGACTCACCTTGGAGGAGGA+GGG | + | chr3.3:84924728-84924747 | None:intergenic | 55.0% | |
| TGAGCCCAACTTCCTACTCC+TGG | + | chr3.3:84926653-84926672 | None:intergenic | 55.0% | |
| ! | AAGCCAGGCAGAAGCGTGAA+GGG | - | chr3.3:84926120-84926139 | MS.gene32893:CDS | 55.0% |
| ATCTCCCCCAACAGCAGCTC+GGG | + | chr3.3:84926066-84926085 | None:intergenic | 60.0% | |
| CATCTCCCCCAACAGCAGCT+CGG | + | chr3.3:84926067-84926086 | None:intergenic | 60.0% | |
| GACTCACCTTGGAGGAGGAG+GGG | + | chr3.3:84924727-84924746 | None:intergenic | 60.0% | |
| GTTCTTCCCCTCCTCCTCCA+AGG | - | chr3.3:84924718-84924737 | MS.gene32893:CDS | 60.0% | |
| ! | AGCCAGGCAGAAGCGTGAAG+GGG | - | chr3.3:84926121-84926140 | MS.gene32893:CDS | 60.0% |
| ! | CAAGCCAGGCAGAAGCGTGA+AGG | - | chr3.3:84926119-84926138 | MS.gene32893:CDS | 60.0% |
| AGGCGGGCAGTAGAGAAGCC+AGG | - | chr3.3:84926632-84926651 | MS.gene32893:intron | 65.0% | |
| TGGCAGCCCGAGCTGCTGTT+GGG | - | chr3.3:84926057-84926076 | MS.gene32893:intron | 65.0% | |
| ! | CCAGGCAGAAGCGTGAAGGG+GGG | - | chr3.3:84926123-84926142 | MS.gene32893:CDS | 65.0% |
| ! | GCAGAAGCGTGAAGGGGGGA+CGG | - | chr3.3:84926127-84926146 | MS.gene32893:CDS | 65.0% |
| ! | GCCAGGCAGAAGCGTGAAGG+GGG | - | chr3.3:84926122-84926141 | MS.gene32893:CDS | 65.0% |
| CCCCCCTTCACGCTTCTGCC+TGG | + | chr3.3:84926126-84926145 | None:intergenic | 70.0% | |
| GCAGCCCGAGCTGCTGTTGG+GGG | - | chr3.3:84926059-84926078 | MS.gene32893:intron | 70.0% | |
| GGCAGCCCGAGCTGCTGTTG+GGG | - | chr3.3:84926058-84926077 | MS.gene32893:intron | 70.0% | |
| GGGGGGACGGACACTGCATC+TGG | - | chr3.3:84926140-84926159 | MS.gene32893:CDS | 70.0% | |
| GTGGCAGCCCGAGCTGCTGT+TGG | - | chr3.3:84926056-84926075 | MS.gene32893:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 84924657 | 84927695 | 84924657 | ID=MS.gene32893 |
| chr3.3 | mRNA | 84924657 | 84927695 | 84924657 | ID=MS.gene32893.t1;Parent=MS.gene32893 |
| chr3.3 | exon | 84927613 | 84927695 | 84927613 | ID=MS.gene32893.t1.exon1;Parent=MS.gene32893.t1 |
| chr3.3 | CDS | 84927613 | 84927695 | 84927613 | ID=cds.MS.gene32893.t1;Parent=MS.gene32893.t1 |
| chr3.3 | exon | 84927433 | 84927514 | 84927433 | ID=MS.gene32893.t1.exon2;Parent=MS.gene32893.t1 |
| chr3.3 | CDS | 84927433 | 84927514 | 84927433 | ID=cds.MS.gene32893.t1;Parent=MS.gene32893.t1 |
| chr3.3 | exon | 84927202 | 84927337 | 84927202 | ID=MS.gene32893.t1.exon3;Parent=MS.gene32893.t1 |
| chr3.3 | CDS | 84927202 | 84927337 | 84927202 | ID=cds.MS.gene32893.t1;Parent=MS.gene32893.t1 |
| chr3.3 | exon | 84927022 | 84927077 | 84927022 | ID=MS.gene32893.t1.exon4;Parent=MS.gene32893.t1 |
| chr3.3 | CDS | 84927022 | 84927077 | 84927022 | ID=cds.MS.gene32893.t1;Parent=MS.gene32893.t1 |
| chr3.3 | exon | 84926888 | 84926944 | 84926888 | ID=MS.gene32893.t1.exon5;Parent=MS.gene32893.t1 |
| chr3.3 | CDS | 84926888 | 84926944 | 84926888 | ID=cds.MS.gene32893.t1;Parent=MS.gene32893.t1 |
| chr3.3 | exon | 84926663 | 84926803 | 84926663 | ID=MS.gene32893.t1.exon6;Parent=MS.gene32893.t1 |
| chr3.3 | CDS | 84926663 | 84926803 | 84926663 | ID=cds.MS.gene32893.t1;Parent=MS.gene32893.t1 |
| chr3.3 | exon | 84926420 | 84926485 | 84926420 | ID=MS.gene32893.t1.exon7;Parent=MS.gene32893.t1 |
| chr3.3 | CDS | 84926420 | 84926485 | 84926420 | ID=cds.MS.gene32893.t1;Parent=MS.gene32893.t1 |
| chr3.3 | exon | 84926080 | 84926341 | 84926080 | ID=MS.gene32893.t1.exon8;Parent=MS.gene32893.t1 |
| chr3.3 | CDS | 84926080 | 84926341 | 84926080 | ID=cds.MS.gene32893.t1;Parent=MS.gene32893.t1 |
| chr3.3 | exon | 84924657 | 84924826 | 84924657 | ID=MS.gene32893.t1.exon9;Parent=MS.gene32893.t1 |
| chr3.3 | CDS | 84924657 | 84924826 | 84924657 | ID=cds.MS.gene32893.t1;Parent=MS.gene32893.t1 |
| Gene Sequence |
| Protein sequence |
