Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054160.t1 | KEH26227.1 | 88 | 100 | 10 | 1 | 1 | 100 | 1 | 98 | 7.10E-40 | 174.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054160.t1 | A0A072U992 | 88.0 | 100 | 10 | 1 | 1 | 100 | 1 | 98 | 5.1e-40 | 174.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050750 | MS.gene054160 | 0.808723 | 2.69E-50 | -1.69E-46 |
| MS.gene050953 | MS.gene054160 | 0.814529 | 1.47E-51 | -1.69E-46 |
| MS.gene052176 | MS.gene054160 | 0.815198 | 1.05E-51 | -1.69E-46 |
| MS.gene053006 | MS.gene054160 | 0.808449 | 3.08E-50 | -1.69E-46 |
| MS.gene05414 | MS.gene054160 | 0.818117 | 2.32E-52 | -1.69E-46 |
| MS.gene05415 | MS.gene054160 | 0.823692 | 1.21E-53 | -1.69E-46 |
| MS.gene054160 | MS.gene054405 | 0.807564 | 4.75E-50 | -1.69E-46 |
| MS.gene054160 | MS.gene055818 | 0.819398 | 1.19E-52 | -1.69E-46 |
| MS.gene054160 | MS.gene058979 | 0.8116 | 6.46E-51 | -1.69E-46 |
| MS.gene054160 | MS.gene059382 | 0.876914 | 9.56E-69 | -1.69E-46 |
| MS.gene054160 | MS.gene060572 | 0.810446 | 1.15E-50 | -1.69E-46 |
| MS.gene054160 | MS.gene061040 | -0.821831 | 3.28E-53 | -1.69E-46 |
| MS.gene054160 | MS.gene064460 | 0.828847 | 7.16E-55 | -1.69E-46 |
| MS.gene054160 | MS.gene064462 | 0.806453 | 8.16E-50 | -1.69E-46 |
| MS.gene054160 | MS.gene064797 | -0.806535 | 7.85E-50 | -1.69E-46 |
| MS.gene054160 | MS.gene068385 | 0.809344 | 1.98E-50 | -1.69E-46 |
| MS.gene054160 | MS.gene071059 | 0.800137 | 1.66E-48 | -1.69E-46 |
| MS.gene054160 | MS.gene071441 | 0.808562 | 2.91E-50 | -1.69E-46 |
| MS.gene054160 | MS.gene071442 | 0.817946 | 2.53E-52 | -1.69E-46 |
| MS.gene054160 | MS.gene071551 | 0.801606 | 8.32E-49 | -1.69E-46 |
| MS.gene054160 | MS.gene073008 | 0.808113 | 3.63E-50 | -1.69E-46 |
| MS.gene054160 | MS.gene07344 | 0.808226 | 3.44E-50 | -1.69E-46 |
| MS.gene054160 | MS.gene09952 | 0.806689 | 7.28E-50 | -1.69E-46 |
| MS.gene054160 | MS.gene20809 | 0.812196 | 4.79E-51 | -1.69E-46 |
| MS.gene054160 | MS.gene22311 | -0.805518 | 1.28E-49 | -1.69E-46 |
| MS.gene054160 | MS.gene23644 | 0.805406 | 1.36E-49 | -1.69E-46 |
| MS.gene054160 | MS.gene25151 | 0.802342 | 5.87E-49 | -1.69E-46 |
| MS.gene054160 | MS.gene25978 | 0.80449 | 2.11E-49 | -1.69E-46 |
| MS.gene054160 | MS.gene27775 | 0.801337 | 9.44E-49 | -1.69E-46 |
| MS.gene054160 | MS.gene28498 | 0.81934 | 1.22E-52 | -1.69E-46 |
| MS.gene054160 | MS.gene30706 | 0.864947 | 8.43E-65 | -1.69E-46 |
| MS.gene054160 | MS.gene31142 | 0.815689 | 8.13E-52 | -1.69E-46 |
| MS.gene054160 | MS.gene31283 | 0.813891 | 2.03E-51 | -1.69E-46 |
| MS.gene054160 | MS.gene32231 | 0.807045 | 6.12E-50 | -1.69E-46 |
| MS.gene054160 | MS.gene35408 | 0.820268 | 7.50E-53 | -1.69E-46 |
| MS.gene054160 | MS.gene37895 | 0.819513 | 1.12E-52 | -1.69E-46 |
| MS.gene054160 | MS.gene41121 | 0.806487 | 8.03E-50 | -1.69E-46 |
| MS.gene054160 | MS.gene44461 | 0.808513 | 2.99E-50 | -1.69E-46 |
| MS.gene054160 | MS.gene44603 | 0.818541 | 1.86E-52 | -1.69E-46 |
| MS.gene054160 | MS.gene44986 | 0.80147 | 8.87E-49 | -1.69E-46 |
| MS.gene054160 | MS.gene45405 | 0.813249 | 2.82E-51 | -1.69E-46 |
| MS.gene054160 | MS.gene45507 | 0.800417 | 1.46E-48 | -1.69E-46 |
| MS.gene054160 | MS.gene48435 | 0.814915 | 1.21E-51 | -1.69E-46 |
| MS.gene054160 | MS.gene52059 | 0.812032 | 5.20E-51 | -1.69E-46 |
| MS.gene054160 | MS.gene52061 | 0.809956 | 1.46E-50 | -1.69E-46 |
| MS.gene054160 | MS.gene52066 | 0.813343 | 2.69E-51 | -1.69E-46 |
| MS.gene054160 | MS.gene52525 | 0.813822 | 2.11E-51 | -1.69E-46 |
| MS.gene054160 | MS.gene53955 | 0.818648 | 1.76E-52 | -1.69E-46 |
| MS.gene054160 | MS.gene63058 | 0.807333 | 5.32E-50 | -1.69E-46 |
| MS.gene054160 | MS.gene63412 | 0.833806 | 4.32E-56 | -1.69E-46 |
| MS.gene054160 | MS.gene67152 | 0.816369 | 5.73E-52 | -1.69E-46 |
| MS.gene054160 | MS.gene73596 | 0.833024 | 6.76E-56 | -1.69E-46 |
| MS.gene054160 | MS.gene73820 | 0.801235 | 9.91E-49 | -1.69E-46 |
| MS.gene054160 | MS.gene75619 | -0.806613 | 7.55E-50 | -1.69E-46 |
| MS.gene054160 | MS.gene76356 | 0.800851 | 1.19E-48 | -1.69E-46 |
| MS.gene054160 | MS.gene77579 | 0.809128 | 2.21E-50 | -1.69E-46 |
| MS.gene054160 | MS.gene77588 | 0.806334 | 8.65E-50 | -1.69E-46 |
| MS.gene054160 | MS.gene78234 | 0.803891 | 2.81E-49 | -1.69E-46 |
| MS.gene054160 | MS.gene80770 | 0.813379 | 2.64E-51 | -1.69E-46 |
| MS.gene054160 | MS.gene81588 | 0.825123 | 5.56E-54 | -1.69E-46 |
| MS.gene054160 | MS.gene84326 | 0.806639 | 7.46E-50 | -1.69E-46 |
| MS.gene054160 | MS.gene91676 | 0.811638 | 6.34E-51 | -1.69E-46 |
| MS.gene054160 | MS.gene97157 | 0.802779 | 4.77E-49 | -1.69E-46 |
| MS.gene054160 | MS.gene99848 | 0.803307 | 3.71E-49 | -1.69E-46 |
| MS.gene054160 | MS.gene99849 | 0.80871 | 2.71E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054160.t1 | MTR_6g048070 | 88.000 | 100 | 10 | 1 | 1 | 100 | 1 | 98 | 1.61e-55 | 172 |
| MS.gene054160.t1 | MTR_6g013220 | 39.610 | 154 | 65 | 2 | 93 | 218 | 55 | 208 | 4.90e-26 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 51 sgRNAs with CRISPR-Local
Find 64 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAAATGCTTTGAAAATTTA+TGG | 0.103412 | 6.1:+27928942 | None:intergenic |
| ACCAAGAGCCATCTCTTATT+TGG | 0.186353 | 6.1:+27929166 | None:intergenic |
| CAATACGCCCGTTTGTTCTT+AGG | 0.226667 | 6.1:-27929381 | MS.gene054160:CDS |
| CTCACTGAGGAAACGGTTAA+AGG | 0.312213 | 6.1:-27929313 | MS.gene054160:CDS |
| GAAGACAATTTCAAATCCTT+TGG | 0.353154 | 6.1:-27929035 | MS.gene054160:CDS |
| AGATAATTTACAGAGTGATT+TGG | 0.366621 | 6.1:-27929068 | MS.gene054160:CDS |
| GGATTACTCGGTTTGGAAAC+AGG | 0.367768 | 6.1:-27929462 | MS.gene054160:CDS |
| GTTCGGAAATGGTTGGGATC+AGG | 0.375886 | 6.1:-27928917 | MS.gene054160:CDS |
| TTCAAATCCTTTGGTGGTGA+TGG | 0.384513 | 6.1:-27929026 | MS.gene054160:CDS |
| ACTCGGTTTGGAAACAGGTT+GGG | 0.406351 | 6.1:-27929457 | MS.gene054160:CDS |
| GTCTACAAAATACTCAAAAT+CGG | 0.406722 | 6.1:+27928964 | None:intergenic |
| GGGTTGATTCGGTTAGGACC+AGG | 0.413078 | 6.1:-27929436 | MS.gene054160:CDS |
| ACCAAATAAGAGATGGCTCT+TGG | 0.414703 | 6.1:-27929167 | MS.gene054160:CDS |
| TCCACCAATCCCATCACAAC+TGG | 0.419830 | 6.1:+27929352 | None:intergenic |
| GAAACAGGTTGGGGTTGATT+CGG | 0.433871 | 6.1:-27929447 | MS.gene054160:CDS |
| GTCACACGGATTACTCGGTT+TGG | 0.436680 | 6.1:-27929469 | MS.gene054160:CDS |
| TTTAAGGTTCGGAAATGGTT+GGG | 0.445226 | 6.1:-27928923 | MS.gene054160:CDS |
| AGAGTGATTTGGTGAACTTA+AGG | 0.455039 | 6.1:-27929057 | MS.gene054160:CDS |
| GACAATTTCAAATCCTTTGG+TGG | 0.464703 | 6.1:-27929032 | MS.gene054160:CDS |
| GGATTATACCTAAGAACAAA+CGG | 0.466483 | 6.1:+27929373 | None:intergenic |
| AAGAGATGGCTCTTGGTTGA+AGG | 0.467671 | 6.1:-27929160 | MS.gene054160:CDS |
| CTCGGTTTGGAAACAGGTTG+GGG | 0.473109 | 6.1:-27929456 | MS.gene054160:CDS |
| TCATTACAATGAAGCACTAA+AGG | 0.481197 | 6.1:+27928872 | None:intergenic |
| TACTCGGTTTGGAAACAGGT+TGG | 0.489557 | 6.1:-27929458 | MS.gene054160:CDS |
| AGGTTGGGGTTGATTCGGTT+AGG | 0.490838 | 6.1:-27929442 | MS.gene054160:CDS |
| TCAAATCCTTTGGTGGTGAT+GGG | 0.493046 | 6.1:-27929025 | MS.gene054160:CDS |
| AGAAGGAAGACAATTTAAGC+TGG | 0.499740 | 6.1:-27929282 | MS.gene054160:CDS |
| CATTACAATGAAGCACTAAA+GGG | 0.500328 | 6.1:+27928873 | None:intergenic |
| TAGGTATAATCCAGTTGTGA+TGG | 0.501054 | 6.1:-27929362 | MS.gene054160:CDS |
| TTCGGAAATGGTTGGGATCA+GGG | 0.508284 | 6.1:-27928916 | MS.gene054160:CDS |
| TCTCTCTCTTTACGACAACT+TGG | 0.508403 | 6.1:+27929088 | None:intergenic |
| GGGGAAAGTATTACTCAGTC+AGG | 0.520760 | 6.1:-27929415 | MS.gene054160:CDS |
| TTCGAAGCTCACTGAGGAAA+CGG | 0.521223 | 6.1:-27929320 | MS.gene054160:CDS |
| TGAATGTCACACGGATTACT+CGG | 0.522233 | 6.1:-27929474 | MS.gene054160:CDS |
| GGTTAAAGGATGTTTGAAGA+AGG | 0.530922 | 6.1:-27929299 | MS.gene054160:CDS |
| TCCAGTTGTGATGGGATTGG+TGG | 0.539138 | 6.1:-27929353 | MS.gene054160:CDS |
| AGGTATAATCCAGTTGTGAT+GGG | 0.541100 | 6.1:-27929361 | MS.gene054160:CDS |
| GATTATACCTAAGAACAAAC+GGG | 0.541259 | 6.1:+27929374 | None:intergenic |
| TTCAAAGACAAGAAAAGTGG+GGG | 0.560074 | 6.1:-27929238 | MS.gene054160:CDS |
| GGATCAGGGAGAGTCCGCTC+AGG | 0.570190 | 6.1:-27928902 | MS.gene054160:CDS |
| AACTTACCCATCACCACCAA+AGG | 0.574656 | 6.1:+27929019 | None:intergenic |
| GTTGATTCGGTTAGGACCAG+GGG | 0.579094 | 6.1:-27929434 | MS.gene054160:CDS |
| GGTTGATTCGGTTAGGACCA+GGG | 0.584355 | 6.1:-27929435 | MS.gene054160:CDS |
| GAAGGAAGACAATTTAAGCT+GGG | 0.584879 | 6.1:-27929281 | MS.gene054160:CDS |
| GACTGAGTAATACTTTCCCC+TGG | 0.585428 | 6.1:+27929418 | None:intergenic |
| AAACTTTACCAAATAAGAGA+TGG | 0.585590 | 6.1:-27929174 | MS.gene054160:CDS |
| TAATCCAGTTGTGATGGGAT+TGG | 0.599371 | 6.1:-27929356 | MS.gene054160:CDS |
| TTTCAAAGACAAGAAAAGTG+GGG | 0.614665 | 6.1:-27929239 | MS.gene054160:CDS |
| AACGGGCGTATTGACTCTGA+TGG | 0.630782 | 6.1:+27929391 | None:intergenic |
| CTAAAGGGCGCTGACCTGAG+CGG | 0.669360 | 6.1:+27928888 | None:intergenic |
| AAGACGTTCGAAGCTCACTG+AGG | 0.781877 | 6.1:-27929326 | MS.gene054160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAATGCTTTGAAAATTTA+TGG | + | chr6.1:27929407-27929426 | None:intergenic | 15.0% |
| !!! | TAAATTTTCAAAGCATTTTA+AGG | - | chr6.1:27929407-27929426 | MS.gene054160:CDS | 15.0% |
| !!! | TTGTCTTTGAAAAATGATTT+TGG | + | chr6.1:27929099-27929118 | None:intergenic | 20.0% |
| ! | AAACTTTACCAAATAAGAGA+TGG | - | chr6.1:27929172-27929191 | MS.gene054160:CDS | 25.0% |
| ! | AGATAATTTACAGAGTGATT+TGG | - | chr6.1:27929278-27929297 | MS.gene054160:CDS | 25.0% |
| ! | GTCTACAAAATACTCAAAAT+CGG | + | chr6.1:27929385-27929404 | None:intergenic | 25.0% |
| !! | TATTGATGTGTCTTTTCTTT+TGG | - | chr6.1:27929227-27929246 | MS.gene054160:CDS | 25.0% |
| !! | TTTTCAAAGACAAGAAAAGT+GGG | - | chr6.1:27929106-27929125 | MS.gene054160:CDS | 25.0% |
| !!! | TTTCAAAGCATTTTAAGGTT+CGG | - | chr6.1:27929412-27929431 | MS.gene054160:CDS | 25.0% |
| !!! | TTTTTCAAAGACAAGAAAAG+TGG | - | chr6.1:27929105-27929124 | MS.gene054160:CDS | 25.0% |
| GAAGACAATTTCAAATCCTT+TGG | - | chr6.1:27929311-27929330 | MS.gene054160:CDS | 30.0% | |
| GATTATACCTAAGAACAAAC+GGG | + | chr6.1:27928975-27928994 | None:intergenic | 30.0% | |
| GGATTATACCTAAGAACAAA+CGG | + | chr6.1:27928976-27928995 | None:intergenic | 30.0% | |
| TTTCAAAGACAAGAAAAGTG+GGG | - | chr6.1:27929107-27929126 | MS.gene054160:CDS | 30.0% | |
| ! | CATTACAATGAAGCACTAAA+GGG | + | chr6.1:27929476-27929495 | None:intergenic | 30.0% |
| ! | TCATTACAATGAAGCACTAA+AGG | + | chr6.1:27929477-27929496 | None:intergenic | 30.0% |
| !! | AAAATCGGCTTCTTTTTCTT+CGG | + | chr6.1:27929370-27929389 | None:intergenic | 30.0% |
| !!! | TTTTAGGTTTGAATGTCACA+CGG | - | chr6.1:27928863-27928882 | MS.gene054160:CDS | 30.0% |
| AGAAGGAAGACAATTTAAGC+TGG | - | chr6.1:27929064-27929083 | MS.gene054160:CDS | 35.0% | |
| AGGTATAATCCAGTTGTGAT+GGG | - | chr6.1:27928985-27929004 | MS.gene054160:CDS | 35.0% | |
| GAAGGAAGACAATTTAAGCT+GGG | - | chr6.1:27929065-27929084 | MS.gene054160:CDS | 35.0% | |
| GACAATTTCAAATCCTTTGG+TGG | - | chr6.1:27929314-27929333 | MS.gene054160:CDS | 35.0% | |
| GGTTAAAGGATGTTTGAAGA+AGG | - | chr6.1:27929047-27929066 | MS.gene054160:CDS | 35.0% | |
| TAGGTATAATCCAGTTGTGA+TGG | - | chr6.1:27928984-27929003 | MS.gene054160:CDS | 35.0% | |
| TTCAAAGACAAGAAAAGTGG+GGG | - | chr6.1:27929108-27929127 | MS.gene054160:CDS | 35.0% | |
| ! | TTTAAGGTTCGGAAATGGTT+GGG | - | chr6.1:27929423-27929442 | MS.gene054160:CDS | 35.0% |
| !! | AGAGTGATTTGGTGAACTTA+AGG | - | chr6.1:27929289-27929308 | MS.gene054160:CDS | 35.0% |
| !!! | AGCATTTTAAGGTTCGGAAA+TGG | - | chr6.1:27929418-27929437 | MS.gene054160:CDS | 35.0% |
| !!! | GTGATGGGTAAGTTTTATGA+TGG | - | chr6.1:27929336-27929355 | MS.gene054160:CDS | 35.0% |
| !!! | TTTTAAGGTTCGGAAATGGT+TGG | - | chr6.1:27929422-27929441 | MS.gene054160:CDS | 35.0% |
| ACCAAATAAGAGATGGCTCT+TGG | - | chr6.1:27929179-27929198 | MS.gene054160:CDS | 40.0% | |
| ACCAAGAGCCATCTCTTATT+TGG | + | chr6.1:27929183-27929202 | None:intergenic | 40.0% | |
| TCTCTCTCTTTACGACAACT+TGG | + | chr6.1:27929261-27929280 | None:intergenic | 40.0% | |
| ! | TAATCCAGTTGTGATGGGAT+TGG | - | chr6.1:27928990-27929009 | MS.gene054160:CDS | 40.0% |
| ! | TGAATGTCACACGGATTACT+CGG | - | chr6.1:27928872-27928891 | MS.gene054160:CDS | 40.0% |
| !! | TCAAATCCTTTGGTGGTGAT+GGG | - | chr6.1:27929321-27929340 | MS.gene054160:CDS | 40.0% |
| !! | TTCAAATCCTTTGGTGGTGA+TGG | - | chr6.1:27929320-27929339 | MS.gene054160:CDS | 40.0% |
| AACTTACCCATCACCACCAA+AGG | + | chr6.1:27929330-27929349 | None:intergenic | 45.0% | |
| AAGAGATGGCTCTTGGTTGA+AGG | - | chr6.1:27929186-27929205 | MS.gene054160:CDS | 45.0% | |
| CAATACGCCCGTTTGTTCTT+AGG | - | chr6.1:27928965-27928984 | MS.gene054160:CDS | 45.0% | |
| CTCACTGAGGAAACGGTTAA+AGG | - | chr6.1:27929033-27929052 | MS.gene054160:CDS | 45.0% | |
| GACTGAGTAATACTTTCCCC+TGG | + | chr6.1:27928931-27928950 | None:intergenic | 45.0% | |
| TTCGAAGCTCACTGAGGAAA+CGG | - | chr6.1:27929026-27929045 | MS.gene054160:CDS | 45.0% | |
| TTCGGAAATGGTTGGGATCA+GGG | - | chr6.1:27929430-27929449 | MS.gene054160:CDS | 45.0% | |
| ! | GAAACAGGTTGGGGTTGATT+CGG | - | chr6.1:27928899-27928918 | MS.gene054160:CDS | 45.0% |
| ! | TCGGCTTCTTTTTCTTCGGA+TGG | + | chr6.1:27929366-27929385 | None:intergenic | 45.0% |
| !! | ACTCGGTTTGGAAACAGGTT+GGG | - | chr6.1:27928889-27928908 | MS.gene054160:CDS | 45.0% |
| !! | GGATTACTCGGTTTGGAAAC+AGG | - | chr6.1:27928884-27928903 | MS.gene054160:CDS | 45.0% |
| !! | GGGGAAAGTATTACTCAGTC+AGG | - | chr6.1:27928931-27928950 | MS.gene054160:CDS | 45.0% |
| !! | TACTCGGTTTGGAAACAGGT+TGG | - | chr6.1:27928888-27928907 | MS.gene054160:CDS | 45.0% |
| AAGACGTTCGAAGCTCACTG+AGG | - | chr6.1:27929020-27929039 | MS.gene054160:CDS | 50.0% | |
| GTTCGGAAATGGTTGGGATC+AGG | - | chr6.1:27929429-27929448 | MS.gene054160:CDS | 50.0% | |
| TCCACCAATCCCATCACAAC+TGG | + | chr6.1:27928997-27929016 | None:intergenic | 50.0% | |
| ! | GTCACACGGATTACTCGGTT+TGG | - | chr6.1:27928877-27928896 | MS.gene054160:CDS | 50.0% |
| ! | TCCAGTTGTGATGGGATTGG+TGG | - | chr6.1:27928993-27929012 | MS.gene054160:CDS | 50.0% |
| !! | AACGGGCGTATTGACTCTGA+TGG | + | chr6.1:27928958-27928977 | None:intergenic | 50.0% |
| !! | AGGTTGGGGTTGATTCGGTT+AGG | - | chr6.1:27928904-27928923 | MS.gene054160:CDS | 50.0% |
| !! | CTCGGTTTGGAAACAGGTTG+GGG | - | chr6.1:27928890-27928909 | MS.gene054160:CDS | 50.0% |
| !! | GGTTGATTCGGTTAGGACCA+GGG | - | chr6.1:27928911-27928930 | MS.gene054160:CDS | 50.0% |
| !! | GTTGATTCGGTTAGGACCAG+GGG | - | chr6.1:27928912-27928931 | MS.gene054160:CDS | 50.0% |
| !! | GGGTTGATTCGGTTAGGACC+AGG | - | chr6.1:27928910-27928929 | MS.gene054160:CDS | 55.0% |
| GTGGGGGAATCATGTTCGCG+TGG | - | chr6.1:27929124-27929143 | MS.gene054160:CDS | 60.0% | |
| !! | CTAAAGGGCGCTGACCTGAG+CGG | + | chr6.1:27929461-27929480 | None:intergenic | 60.0% |
| GGATCAGGGAGAGTCCGCTC+AGG | - | chr6.1:27929444-27929463 | MS.gene054160:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 27928856 | 27929512 | 27928856 | ID=MS.gene054160 |
| chr6.1 | mRNA | 27928856 | 27929512 | 27928856 | ID=MS.gene054160.t1;Parent=MS.gene054160 |
| chr6.1 | exon | 27928856 | 27929512 | 27928856 | ID=MS.gene054160.t1.exon1;Parent=MS.gene054160.t1 |
| chr6.1 | CDS | 27928856 | 27929512 | 27928856 | ID=cds.MS.gene054160.t1;Parent=MS.gene054160.t1 |
| Gene Sequence |
| Protein sequence |
